Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0005069

Physical Location & Seq

Genomic Coordinates Reverse (-)

12970043 .. 12972513

Gene Structure 2471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G098500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 849 bp

ATGGGCAAGAAAATGAAGCTCCCTTTTCTCTCCAAGAACACAGAGGCATCAAGATATTCTTCTTCTTCTTCTTCAACATGGCCTTGGCCTTCTTGCTCCCAACCCAGAACCCTCTCTTTCAGAGCAGGCAATGATATCTTCAAGACCATAAACTCAGCCTACTTTGACACAAGCACCACAGAAGTGATAGAAACACCAGACTCATTCTTCACCAACTCATCTGAGTCATGTCCAAGCTTCTCCACAGCCTCTGACGACTCAGGTTTGGATCCAGTTGAGACAGTGATCAAAGGGTTGAGGTCAGAGAGGCTCTTCTTTGAGCCTAAGGCAGGTGAAACAAGCTCTATAGTAATGGAGGAGGAGGCTAAGGGAGCAGCAGATGGTGAGGAGCTTAATATTGTTCCATTCAAGGAGAGTGTGGTTTTGTCAATGGACTCTCCAGACCCCATTTTGGATTTTAGGAAATCCATGGAGGAAATGGTGGAGGCTCATGGTTTGAAGGATTGGGATCATCTTGAAGAGCTTTTGTGTTGGTATTTGAGGGTCAATGCGAAAAGCAATCATGGGTATATTGTTGGAGCTTTTGTTGATCTCTTGGTAGGTCTAGCTTTTAGTATTGGTTCTACTAATTGTTCTTGTTCTTGTAATATTAGTTCTCCTTCTTCTCCTTTATCTAATTTTTATAACAGTACTGCTAGTACTTCTTCTTTATCATCTTCTTCTATTCCTTGTGTCTCATCAATAGAGCCTGAGGAAGAATCTGAAAGCACTCCTTGTTTGTCTTCATTGTTTGAAGCTGAGGAAGATCAGATTCATGAAGAAGATGAAGCTTCGCCATCTTCATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006355 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ovate

Protein Analysis

283

Amino Acids

30.72

Weight (kDa)

4.34

Isoelectric Point (pI)

64.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04820
fragaria_vesca	FvH4_6g19870
malus_domestica	MD02G1258900.v1.1 MD07G1061800.v1.1 MD07G1061900.v1.1 MD12G1034200.v1.1 MD14G1035600.v1.1
prunus_persica	Prupe.2G071500_v2.0.a1 Prupe.7G098500_v2.0.a1 Prupe.7G098500_v2.0.a1 Prupe.7G098500_v2.0.a1 Prupe.7G098500_v2.0.a1 Prupe.7G098500_v2.0.a1 Prupe.7G098500_v2.0.a1 Prupe.7G098500_v2.0.a1 Prupe.7G098500_v2.0.a1 Prupe.7G098500_v2.0.a1 Prupe.7G098500_v2.0.a1
pyrus_communis	pycom07g04730 pycom12g03170 pycom14g03130
rosa_chinensis	RchiOBHm_Chr3g0475291
rosa_laevigata	RLG00000023854
rosa_multiflora	Rmu_ssc0000140.1_g000002
rosa_roxburghii	Rroxscaffold_6G00406410
rosa_rugosa	Rorug03G0147700
rosa_samantha	Rh3AG197700 Rh3BG228000 Rh3DG223200
rosa_wichuraiana	Rw3G017970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	684
AarI	CACCTGC	1 cut(s)	320
Acc36I	ACCTGC	1 cut(s)	320
AclWI	GGATC	3 cut(s)	263, 276, 516
AfaI	GTAC	2 cut(s)	691, 700
AfiI	CCNNNNNNNGG	2 cut(s)	329, 451
AgsI	TTSAA	6 cut(s)	75, 142, 409, 499, 518, 794
AleI	CACNNNNGTG	1 cut(s)	182
AluBI	AGCT	9 cut(s)	19, 237, 342, 391, 523, 581, 608, 797, 830
AluI	AGCT	9 cut(s)	19, 237, 342, 391, 523, 581, 608, 797, 830
Alw26I	GTCTC	2 cut(s)	272, 739
AlwI	GGATC	3 cut(s)	263, 276, 516
AlwNI	CAGNNNCTG	1 cut(s)	251
AoxI	GGCC	2 cut(s)	80, 86
ApeKI	GCWGC	1 cut(s)	374
AsuHPI	GGTGA	3 cut(s)	202, 344, 395
AxyI	CCTNAGG	2 cut(s)	324, 750
BamHI	GGATCC	1 cut(s)	268
BbsI	GAAGAC	1 cut(s)	774
BbvCI	CCTCAGC	1 cut(s)	798
BbvI	GCAGC	1 cut(s)	386
BccI	CCATC	2 cut(s)	374, 844
BclI	TGATCA	1 cut(s)	285
BcoDI	GTCTC	2 cut(s)	272, 739
BfaI	CTAG	2 cut(s)	605, 696
BfmI	CTRYAG	1 cut(s)	345
BfuAI	ACCTGC	1 cut(s)	320
BisI	GCNGC	1 cut(s)	375
BlsI	GCNGC	1 cut(s)	376
BmcAI	AGTACT	2 cut(s)	691, 700
BmiI	GGNNCC	1 cut(s)	270
BmsI	GCATC	1 cut(s)	56
BpiI	GAAGAC	1 cut(s)	774
BpmI	CTGGAG	1 cut(s)	423
Bpu10I	CCTNAGC	2 cut(s)	366, 798
BsaBI	GATNNNNATC	1 cut(s)	507
BsaJI	CCNNGG	2 cut(s)	83, 468
BsaXI	ACNNNNNCTCC	2 cut(s)	570, 600
Bsc4I	CCNNNNNNNGG	2 cut(s)	329, 451
Bse1I	ACTGG	1 cut(s)	272
Bse21I	CCTNAGG	2 cut(s)	324, 750
Bse3DI	GCAATG	1 cut(s)	136
Bse8I	GATNNNNATC	1 cut(s)	507
BseDI	CCNNGG	2 cut(s)	83, 468
BseJI	GATNNNNATC	1 cut(s)	507
BseLI	CCNNNNNNNGG	2 cut(s)	329, 451
BseMI	GCAATG	1 cut(s)	136
BseMII	CTCAG	5 cut(s)	168, 213, 273, 741, 789
BseNI	ACTGG	1 cut(s)	272
BseRI	GAGGAG	3 cut(s)	371, 374, 401
BseXI	GCAGC	1 cut(s)	386
BshFI	GGCC	2 cut(s)	82, 88
BslI	CCNNNNNNNGG	2 cut(s)	329, 451
BsmAI	GTCTC	2 cut(s)	272, 739
BsnI	GGCC	2 cut(s)	82, 88
Bsp143I	GATC	5 cut(s)	268, 285, 508, 589, 805
Bsp19I	CCATGG	1 cut(s)	468
BspANI	GGCC	2 cut(s)	82, 88
BspCNI	CTCAG	5 cut(s)	167, 214, 272, 742, 790
BspHI	TCATGA	1 cut(s)	814
BspLI	GGNNCC	1 cut(s)	270
BspMI	ACCTGC	1 cut(s)	320
BspPI	GGATC	3 cut(s)	263, 276, 516
BspQI	GCTCTTC	2 cut(s)	317, 513
BsrDI	GCAATG	1 cut(s)	136
BsrI	ACTGG	1 cut(s)	272
BssECI	CCNNGG	2 cut(s)	83, 468
BssMI	GATC	5 cut(s)	268, 285, 508, 589, 805
BssT1I	CCWWGG	2 cut(s)	83, 468
Bst4CI	ACNGT	2 cut(s)	283, 689
Bst6I	CTCTTC	2 cut(s)	317, 513
BstC8I	GCNNGC	1 cut(s)	127
BstDEI	CTNAG	8 cut(s)	154, 222, 259, 324, 366, 750, 798, 846
BstDSI	CCRYGG	1 cut(s)	468
BstENI	CCTNNNNNAGG	1 cut(s)	327
BstKTI	GATC	5 cut(s)	271, 288, 511, 592, 808
BstMAI	GTCTC	2 cut(s)	272, 739
BstMBI	GATC	5 cut(s)	268, 285, 508, 589, 805
BstMWI	GCNNNNNNNGC	1 cut(s)	371
BstSFI	CTRYAG	1 cut(s)	345
BstV1I	GCAGC	1 cut(s)	386
BstV2I	GAAGAC	1 cut(s)	774
BstX2I	RGATCY	1 cut(s)	268
BstYI	RGATCY	1 cut(s)	268
Bsu36I	CCTNAGG	2 cut(s)	324, 750
BsuRI	GGCC	2 cut(s)	82, 88
BtgI	CCRYGG	1 cut(s)	468
BtsIMutI	CAGTG	1 cut(s)	288
BveI	ACCTGC	1 cut(s)	320
Cac8I	GCNNGC	1 cut(s)	127
CaiI	CAGNNNCTG	1 cut(s)	251
CciI	TCATGA	1 cut(s)	814
Csp6I	GTAC	2 cut(s)	690, 699
CviAII	CATG	6 cut(s)	78, 228, 469, 491, 563, 815
CviQI	GTAC	2 cut(s)	690, 699
DdeI	CTNAG	8 cut(s)	154, 222, 259, 324, 366, 750, 798, 846
DpnI	GATC	5 cut(s)	270, 287, 510, 591, 807
DpnII	GATC	5 cut(s)	268, 285, 508, 589, 805
Eam1104I	CTCTTC	2 cut(s)	317, 513
EarI	CTCTTC	2 cut(s)	317, 513
Eco130I	CCWWGG	2 cut(s)	83, 468
Eco32I	GATATC	1 cut(s)	136
Eco81I	CCTNAGG	2 cut(s)	324, 750
EcoNI	CCTNNNNNAGG	1 cut(s)	327
EcoRV	GATATC	1 cut(s)	136
EcoT14I	CCWWGG	2 cut(s)	83, 468
ErhI	CCWWGG	2 cut(s)	83, 468
FaeI	CATG	6 cut(s)	81, 231, 472, 494, 566, 818
FalI	AAGNNNNNCTT	4 cut(s)	43, 75, 757, 789
FatI	CATG	6 cut(s)	77, 227, 468, 490, 562, 814
FbaI	TGATCA	1 cut(s)	285
Fnu4HI	GCNGC	1 cut(s)	375
Fsp4HI	GCNGC	1 cut(s)	375
FspBI	CTAG	2 cut(s)	605, 696
GluI	GCNGC	1 cut(s)	375
GsuI	CTGGAG	1 cut(s)	423
HaeIII	GGCC	2 cut(s)	82, 88
Hin1II	CATG	6 cut(s)	81, 231, 472, 494, 566, 818
HindIII	AAGCTT	2 cut(s)	235, 828
HinfI	GANTC	6 cut(s)	200, 224, 257, 434, 758, 811
HphI	GGTGA	3 cut(s)	202, 344, 395
Hpy188I	TCNGA	6 cut(s)	122, 223, 253, 304, 763, 810
Hpy188III	TCNNGA	5 cut(s)	51, 142, 440, 515, 815
HpyAV	CCTTC	3 cut(s)	99, 493, 669
HpyCH4III	ACNGT	2 cut(s)	283, 689
HpyF10VI	GCNNNNNNNGC	1 cut(s)	371
HpyF3I	CTNAG	8 cut(s)	154, 222, 259, 324, 366, 750, 798, 846
Hsp92II	CATG	6 cut(s)	81, 231, 472, 494, 566, 818
Ksp22I	TGATCA	1 cut(s)	285
Kzo9I	GATC	5 cut(s)	268, 285, 508, 589, 805
LguI	GCTCTTC	2 cut(s)	317, 513
LmnI	GCTCC	5 cut(s)	24, 101, 371, 388, 578
LpnPI	CCDG	8 cut(s)	111, 118, 210, 246, 285, 315, 453, 762
Lsp1109I	GCAGC	1 cut(s)	386
LweI	GCATC	1 cut(s)	56
MaeI	CTAG	2 cut(s)	605, 696
MalI	GATC	5 cut(s)	270, 287, 510, 591, 807
MboI	GATC	5 cut(s)	268, 285, 508, 589, 805
MflI	RGATCY	1 cut(s)	268
MluCI	AATT	2 cut(s)	628, 676
MlyI	GAGTC	4 cut(s)	194, 233, 251, 428
MmeI	TCCRAC	1 cut(s)	556
MseI	TTAA	1 cut(s)	393
MslI	CAYNNNNRTG	1 cut(s)	182
MwoI	GCNNNNNNNGC	1 cut(s)	371
NcoI	CCATGG	1 cut(s)	468
NdeII	GATC	5 cut(s)	268, 285, 508, 589, 805
NlaIII	CATG	6 cut(s)	81, 231, 472, 494, 566, 818
NlaIV	GGNNCC	1 cut(s)	270
OliI	CACNNNNGTG	1 cut(s)	182
PagI	TCATGA	1 cut(s)	814
PaqCI	CACCTGC	1 cut(s)	320
PciSI	GCTCTTC	2 cut(s)	317, 513
PfeI	GAWTC	2 cut(s)	758, 811
PkrI	GCNGC	1 cut(s)	376
PleI	GAGTC	4 cut(s)	194, 232, 251, 428
PpsI	GAGTC	4 cut(s)	194, 232, 251, 428
PsiI	TTATAA	1 cut(s)	684
PspN4I	GGNNCC	1 cut(s)	270
PsrI	GAACNNNNNNTAC	2 cut(s)	637, 669
PstNI	CAGNNNCTG	1 cut(s)	251
PsuI	RGATCY	1 cut(s)	268
RsaI	GTAC	2 cut(s)	691, 700
RsaNI	GTAC	2 cut(s)	690, 699
RseI	CAYNNNNRTG	1 cut(s)	182
SapI	GCTCTTC	2 cut(s)	317, 513
SaqAI	TTAA	1 cut(s)	393
SatI	GCNGC	1 cut(s)	375
Sau3AI	GATC	5 cut(s)	268, 285, 508, 589, 805
ScaI	AGTACT	2 cut(s)	691, 700
SchI	GAGTC	4 cut(s)	194, 233, 251, 428
SfaNI	GCATC	1 cut(s)	56
SfcI	CTRYAG	1 cut(s)	345
SmiMI	CAYNNNNRTG	1 cut(s)	182
Sse9I	AATT	2 cut(s)	628, 676
SspI	AATATT	2 cut(s)	397, 649
SspMI	CTAG	2 cut(s)	605, 696
StyI	CCWWGG	2 cut(s)	83, 468
TaaI	ACNGT	2 cut(s)	283, 689
TasI	AATT	2 cut(s)	628, 676
TatI	WGTACW	2 cut(s)	689, 698
TfiI	GAWTC	2 cut(s)	758, 811
Tru1I	TTAA	1 cut(s)	393
Tru9I	TTAA	1 cut(s)	393
TscAI	CASTG	1 cut(s)	288
TseI	GCWGC	1 cut(s)	374
TspDTI	ATGAA	6 cut(s)	29, 774, 803, 831, 831, 840
TspRI	CASTG	1 cut(s)	288
XagI	CCTNNNNNAGG	1 cut(s)	327
XcmI	CCANNNNNNNNNTGG	1 cut(s)	475
XspI	CTAG	2 cut(s)	605, 696
ZrmI	AGTACT	2 cut(s)	691, 700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.