Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006535

Physical Location & Seq

Genomic Coordinates Reverse (-)

14493773 .. 14495405

Gene Structure 1633 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G121900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 762 bp

ATGTTAGAATTTGCTACAATATCTCAGTGCCTCACCTATGATGACAAAGAGGATGACCTCATGAATGCTTCACTGAAAAATGGTGCCATTTCGCTGACCCGGCAGCTGAATAACTACAGGGAATATCAAAATGAAGTGGTGAGTATGGTGGGAAGAGCTAAAGCCAATGACATATTCTCTGGAGCCATTCACCTTCTAAGTGCAGGGACCAGTGATTTCATTCAAAACTATTACATCAATCCCCTTCTTAGAGTCTACTCACCTGACCAATTCTCAGACATTCTCATGATATCCTACTCCACTTTCATTCAGAACTTGTATGGACTGGGAGTGCGAAGGATTGGAGTCATAAGCTTACCACCAACTGGGTGTTTGCCAGCAGCAATCACCCTATTTGGCTTAGGAAGAAACCAGTGCATCCCAAGGTTAAACCAAGATGCCATTTCATTCAACAATAAGCTAAACAACACATCTCAAATTTTGAAGAGCAGACTCCCTGGTCTCAAGCTTGTAGTGTTTGATATCTTCCAGCCTGTCCTGGATATGATCACAAACCCTGGTGATAATGGGTTCTTTGAGTCGAGAAGAGCTTGTTGTGGAACAGGTAGATTGGAAACCTCTAAGCTTTGCAACTCTAGGTCTGTAGGAACATGTACCAATGCAACTGGTTATGTGTTTTGGGATGGCTTCCATCCCTCTGAAGCTGCCAACGAGGTCTTGGCTGGCAATATACTTCAGCAGGGTTTTGACCTCATATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_GDSL

Protein Analysis

254

Amino Acids

27.93

Weight (kDa)

5.7

Isoelectric Point (pI)

34.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006535)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53100 AT5G03810 AT5G03820 AT5G03820
fragaria_vesca	FvH4_6g17360 FvH4_6g17360 FvH4_6g17360
prunus_persica	Prupe.7G121900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0471511 RchiOBHm_Chr3g0471521
rosa_laevigata	RLG00000024157 RLG00000024170 RLG00000024172
rosa_multiflora	Rmu_sc0006582.1_g000003 Rmu_sc0030769.1_g000002 Rmu_ssc0000445.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409830 Rroxscaffold_6G00409890
rosa_rugosa	Rorug03G0118200
rosa_samantha	Rh3AG168300 Rh3BG193900 Rh3CG184300 Rh3DG181600 Rh3DG181800
rosa_wichuraiana	Rw3G015850 Rw3G015870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	498
AccB1I	GGYRCC	1 cut(s)	83
AccB7I	CCANNNNNTGG	1 cut(s)	365
AccI	GTMKAC	1 cut(s)	255
AcsI	RAATTY	2 cut(s)	8, 477
AcuI	CTGAAG	2 cut(s)	719, 720
AfaI	GTAC	1 cut(s)	655
AfiI	CCNNNNNNNGG	1 cut(s)	365
AflIII	ACRYGT	1 cut(s)	650
AgsI	TTSAA	3 cut(s)	224, 451, 484
AjnI	CCWGG	3 cut(s)	496, 537, 556
AjuI	GAANNNNNNNTTGG	2 cut(s)	158, 190
AluBI	AGCT	8 cut(s)	106, 158, 354, 460, 508, 590, 625, 704
AluI	AGCT	8 cut(s)	106, 158, 354, 460, 508, 590, 625, 704
Alw26I	GTCTC	1 cut(s)	506
ApeKI	GCWGC	3 cut(s)	103, 380, 704
ApoI	RAATTY	2 cut(s)	8, 477
AspS9I	GGNCC	1 cut(s)	207
AsuC2I	CCSGG	1 cut(s)	100
AsuHPI	GGTGA	6 cut(s)	25, 151, 182, 252, 379, 572
AvaII	GGWCC	1 cut(s)	207
BanI	GGYRCC	1 cut(s)	83
BbvI	GCAGC	3 cut(s)	115, 392, 691
BccI	CCATC	2 cut(s)	677, 699
BciT130I	CCWGG	3 cut(s)	498, 539, 558
BclI	TGATCA	1 cut(s)	546
BcnI	CCSGG	1 cut(s)	100
BcoDI	GTCTC	1 cut(s)	506
BfaI	CTAG	1 cut(s)	636
BfmI	CTRYAG	2 cut(s)	115, 642
BisI	GCNGC	3 cut(s)	104, 381, 705
BlsI	GCNGC	3 cut(s)	105, 382, 706
Bme1390I	CCNGG	4 cut(s)	100, 498, 539, 558
Bme18I	GGWCC	1 cut(s)	207
BmgT120I	GGNCC	1 cut(s)	207
BmiI	GGNNCC	3 cut(s)	85, 184, 208
BmrFI	CCNGG	4 cut(s)	100, 498, 539, 558
BmrI	ACTGGG	2 cut(s)	335, 375
BmsI	GCATC	2 cut(s)	426, 427
BmuI	ACTGGG	2 cut(s)	335, 375
BpmI	CTGGAG	1 cut(s)	201
Bpu10I	CCTNAGC	1 cut(s)	400
BpuEI	CTTGAG	1 cut(s)	488
BpuMI	CCSGG	1 cut(s)	100
BsaI	GGTCTC	1 cut(s)	506
BsaJI	CCNNGG	3 cut(s)	422, 496, 556
Bsc4I	CCNNNNNNNGG	1 cut(s)	365
Bse1I	ACTGG	5 cut(s)	210, 330, 370, 412, 670
BseBI	CCWGG	3 cut(s)	498, 539, 558
BseDI	CCNNGG	3 cut(s)	422, 496, 556
BseGI	GGATG	4 cut(s)	58, 417, 688, 691
BseLI	CCNNNNNNNGG	1 cut(s)	365
BseMII	CTCAG	2 cut(s)	38, 288
BseNI	ACTGG	5 cut(s)	210, 330, 370, 412, 670
BseXI	GCAGC	3 cut(s)	115, 392, 691
BsgI	GTGCAG	1 cut(s)	222
BshNI	GGYRCC	1 cut(s)	83
BsiSI	CCGG	1 cut(s)	100
BslFI	GGGAC	1 cut(s)	220
BslI	CCNNNNNNNGG	1 cut(s)	365
BsmAI	GTCTC	1 cut(s)	506
BsmFI	GGGAC	1 cut(s)	220
BsmI	GAATGC	1 cut(s)	70
Bso31I	GGTCTC	1 cut(s)	506
Bsp143I	GATC	1 cut(s)	546
BspCNI	CTCAG	2 cut(s)	37, 287
BspHI	TCATGA	2 cut(s)	60, 285
BspLI	GGNNCC	3 cut(s)	85, 184, 208
BspQI	GCTCTTC	3 cut(s)	148, 479, 580
BspT107I	GGYRCC	1 cut(s)	83
BspTNI	GGTCTC	1 cut(s)	506
BsrI	ACTGG	5 cut(s)	210, 330, 370, 412, 670
BssECI	CCNNGG	3 cut(s)	422, 496, 556
BssMI	GATC	1 cut(s)	546
BssT1I	CCWWGG	1 cut(s)	422
Bst2UI	CCWGG	3 cut(s)	498, 539, 558
Bst6I	CTCTTC	3 cut(s)	148, 479, 580
BstC8I	GCNNGC	2 cut(s)	378, 724
BstDEI	CTNAG	6 cut(s)	24, 197, 248, 274, 400, 621
BstF5I	GGATG	4 cut(s)	58, 417, 688, 691
BstKTI	GATC	1 cut(s)	549
BstMAI	GTCTC	1 cut(s)	506
BstMBI	GATC	1 cut(s)	546
BstMWI	GCNNNNNNNGC	1 cut(s)	100
BstNI	CCWGG	3 cut(s)	498, 539, 558
BstNSI	RCATGY	1 cut(s)	654
BstSCI	CCNGG	4 cut(s)	98, 496, 537, 556
BstSFI	CTRYAG	2 cut(s)	115, 642
BstV1I	GCAGC	3 cut(s)	115, 392, 691
BtsCI	GGATG	4 cut(s)	58, 417, 688, 691
BtsIMutI	CAGTG	4 cut(s)	32, 71, 217, 419
Cac8I	GCNNGC	2 cut(s)	378, 724
CciI	TCATGA	2 cut(s)	60, 285
Cfr13I	GGNCC	1 cut(s)	207
Csp6I	GTAC	1 cut(s)	654
CviAII	CATG	3 cut(s)	61, 286, 651
CviQI	GTAC	1 cut(s)	654
DdeI	CTNAG	6 cut(s)	24, 197, 248, 274, 400, 621
DpnI	GATC	1 cut(s)	548
DpnII	GATC	1 cut(s)	546
DrdI	GACNNNNNNGTC	1 cut(s)	498
DseDI	GACNNNNNNGTC	1 cut(s)	498
Eam1104I	CTCTTC	3 cut(s)	148, 479, 580
EarI	CTCTTC	3 cut(s)	148, 479, 580
Eco130I	CCWWGG	1 cut(s)	422
Eco31I	GGTCTC	1 cut(s)	506
Eco32I	GATATC	2 cut(s)	291, 523
Eco47I	GGWCC	1 cut(s)	207
Eco57I	CTGAAG	2 cut(s)	719, 720
EcoRII	CCWGG	3 cut(s)	496, 537, 556
EcoRV	GATATC	2 cut(s)	291, 523
EcoT14I	CCWWGG	1 cut(s)	422
ErhI	CCWWGG	1 cut(s)	422
FaeI	CATG	3 cut(s)	64, 289, 654
FaqI	GGGAC	1 cut(s)	220
FatI	CATG	3 cut(s)	60, 285, 650
FbaI	TGATCA	1 cut(s)	546
FblI	GTMKAC	1 cut(s)	255
Fnu4HI	GCNGC	3 cut(s)	104, 381, 705
FokI	GGATG	4 cut(s)	65, 404, 678, 695
Fsp4HI	GCNGC	3 cut(s)	104, 381, 705
FspBI	CTAG	1 cut(s)	636
GluI	GCNGC	3 cut(s)	104, 381, 705
GsuI	CTGGAG	1 cut(s)	201
HapII	CCGG	1 cut(s)	100
Hin1II	CATG	3 cut(s)	64, 289, 654
HindIII	AAGCTT	3 cut(s)	352, 506, 623
HinfI	GANTC	4 cut(s)	252, 345, 492, 578
HpaII	CCGG	1 cut(s)	100
HphI	GGTGA	6 cut(s)	25, 151, 182, 252, 379, 572
Hpy166II	GTNNAC	1 cut(s)	256
Hpy188I	TCNGA	3 cut(s)	277, 312, 700
Hpy188III	TCNNGA	5 cut(s)	61, 180, 286, 582, 759
Hpy8I	GTNNAC	1 cut(s)	256
HpyAV	CCTTC	3 cut(s)	203, 254, 330
HpyCH4V	TGCA	4 cut(s)	203, 417, 630, 662
HpyF10VI	GCNNNNNNNGC	1 cut(s)	100
HpyF3I	CTNAG	6 cut(s)	24, 197, 248, 274, 400, 621
Hsp92II	CATG	3 cut(s)	64, 289, 654
Ksp22I	TGATCA	1 cut(s)	546
Kzo9I	GATC	1 cut(s)	546
LguI	GCTCTTC	3 cut(s)	148, 479, 580
LmnI	GCTCC	1 cut(s)	182
Lsp1109I	GCAGC	3 cut(s)	115, 392, 691
LweI	GCATC	2 cut(s)	426, 427
MaeI	CTAG	1 cut(s)	636
MalI	GATC	1 cut(s)	548
MboI	GATC	1 cut(s)	546
MboII	GAAGA	5 cut(s)	165, 417, 496, 517, 597
MluCI	AATT	3 cut(s)	8, 269, 477
MlyI	GAGTC	4 cut(s)	261, 354, 486, 587
MnlI	CCTC	7 cut(s)	41, 43, 68, 628, 706, 706, 761
MseI	TTAA	1 cut(s)	428
MslI	CAYNNNNRTG	1 cut(s)	284
MspA1I	CMGCKG	1 cut(s)	106
MspI	CCGG	1 cut(s)	100
MspR9I	CCNGG	4 cut(s)	100, 498, 539, 558
Mva1269I	GAATGC	1 cut(s)	70
MvaI	CCWGG	3 cut(s)	498, 539, 558
MwoI	GCNNNNNNNGC	1 cut(s)	100
NciI	CCSGG	1 cut(s)	100
NdeII	GATC	1 cut(s)	546
NlaIII	CATG	3 cut(s)	64, 289, 654
NlaIV	GGNNCC	3 cut(s)	85, 184, 208
NspI	RCATGY	1 cut(s)	654
PagI	TCATGA	2 cut(s)	60, 285
PciI	ACATGT	1 cut(s)	650
PciSI	GCTCTTC	3 cut(s)	148, 479, 580
PctI	GAATGC	1 cut(s)	70
PflMI	CCANNNNNTGG	1 cut(s)	365
PfoI	TCCNGGA	1 cut(s)	537
PkrI	GCNGC	3 cut(s)	105, 382, 706
PleI	GAGTC	4 cut(s)	260, 353, 486, 586
PpsI	GAGTC	4 cut(s)	260, 353, 486, 586
PscI	ACATGT	1 cut(s)	650
Psp6I	CCWGG	3 cut(s)	496, 537, 556
PspGI	CCWGG	3 cut(s)	496, 537, 556
PspN4I	GGNNCC	3 cut(s)	85, 184, 208
PspPI	GGNCC	1 cut(s)	207
PvuII	CAGCTG	1 cut(s)	106
RsaI	GTAC	1 cut(s)	655
RsaNI	GTAC	1 cut(s)	654
RseI	CAYNNNNRTG	1 cut(s)	284
SapI	GCTCTTC	3 cut(s)	148, 479, 580
SaqAI	TTAA	1 cut(s)	428
SatI	GCNGC	3 cut(s)	104, 381, 705
Sau3AI	GATC	1 cut(s)	546
Sau96I	GGNCC	1 cut(s)	207
SchI	GAGTC	4 cut(s)	261, 354, 486, 587
ScrFI	CCNGG	4 cut(s)	100, 498, 539, 558
SfaNI	GCATC	2 cut(s)	426, 427
SfcI	CTRYAG	2 cut(s)	115, 642
SinI	GGWCC	1 cut(s)	207
SmiMI	CAYNNNNRTG	1 cut(s)	284
SmlI	CTYRAG	1 cut(s)	503
SmoI	CTYRAG	1 cut(s)	503
Sse9I	AATT	3 cut(s)	8, 269, 477
SspMI	CTAG	1 cut(s)	636
StyD4I	CCNGG	4 cut(s)	98, 496, 537, 556
StyI	CCWWGG	1 cut(s)	422
TaqI	TCGA	1 cut(s)	581
TasI	AATT	3 cut(s)	8, 269, 477
Tru1I	TTAA	1 cut(s)	428
Tru9I	TTAA	1 cut(s)	428
TscAI	CASTG	4 cut(s)	32, 78, 217, 419
TseI	GCWGC	3 cut(s)	103, 380, 704
TspDTI	ATGAA	5 cut(s)	77, 147, 208, 295, 435
TspRI	CASTG	4 cut(s)	32, 78, 217, 419
Van91I	CCANNNNNTGG	1 cut(s)	365
VpaK11BI	GGWCC	1 cut(s)	207
XapI	RAATTY	2 cut(s)	8, 477
XceI	RCATGY	1 cut(s)	654
XcmI	CCANNNNNNNNNTGG	1 cut(s)	715
XmiI	GTMKAC	1 cut(s)	255
XspI	CTAG	1 cut(s)	636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.