Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006508

Physical Location & Seq

Genomic Coordinates Forward (+)

15274001 .. 15281783

Gene Structure 7783 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G135200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGCGTGCTGTGCAACCCACAATCCTCTCTACTTTTGTGGGTAACCGCTTGCTTCAGTCAGCGCAGCCTCTTCACCAACTCTTCAGCTACAACCCAGGAAGCAAGCATGTTTCGATGCAGTTATCCAAAAGATTTTCTGGCTTGACCAACCTTTTGTTCAATGGAAGAAATGCAGATAAATTTCTAAACACCAAGCGCAAACGTCTAAGGCCTGGAAAAATTTCACCACATCGCCCTGTTCCAGATCATATACCAATGCCTCCTTATGTCAAATCTAAAAAACCGCCTGGGATTGCAAGTGGACCTGAAGTGCATGATGAGAAGGGGATAGAATGCATGAGAGCCTCCGGAAAACTTGCAGCACATGTTCTAGAATTTGCTGGGACTTTGGTCAAGCCAGGCATAAAGACAGATGAAATTGACCAAGCTGTTCACCAAATGATAATTGATAATGGTGCCTACCCGTCACCTCTTGGCTATGGTGGTTTTCCAAAGAGTGTCTGCACATCAGTGAACGAATGTATTTGCCATGGAATACCAGATTCCCGAGCACTTGAGGATGGTGATATAATTAACATTGATGTTACGGTCTATTTAAATGGATATCATGGTGATACATCAGCTACTTTCTTCTGTGGAGATGTTGATGATGAGGGCAGAAAGTTAGTTCAGGTAACTAAAGAATGCCTTGACAAGGCAATCTCAATATGTGCACCTGGAGTGGAGCTTAAGAAAATTGGAAAAACGATCCAAGAGCATGCAGATAAATATCGTTATGGTGTTGTTCGACAGTTCGTTGGGCATGGGGTTGGACGTGTCTTTCATGCCGATCCAGTTGTTCTACACTTCAGGAACAATGAAAGCGGACGCATGGTGGTAAACCAAACCTTCACAATAGAACCGATGCTGACACTAGGCAGCTGTAATCCCGTAATGTGGGACGATAATTGGACAGTAGTCACAGAAGATGGAAGCTTGTCAGCACAGTTTGAACATACCATTTTAATAACCGAAGACGGGGCTGAGATACTAACTCGGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0019538 GO:0031365 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:0097305 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M24

Protein Analysis

348

Amino Acids

38.2

Weight (kDa)

7.21

Isoelectric Point (pI)

33.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006508)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25740 AT3G25740 AT4G37040
fragaria_vesca	FvH4_1g15810 FvH4_1g15810 FvH4_1g15810 FvH4_1g15810 FvH4_1g15810 FvH4_1g15810
malus_domestica	MD00G1045000.v1.1 MD02G1169900.v1.1
prunus_persica	Prupe.7G135200_v2.0.a1 Prupe.7G135300_v2.0.a1
pyrus_communis	pycom02g13680
rosa_chinensis	RchiOBHm_Chr2g0105091 RchiOBHm_Chr5g0066781
rosa_laevigata	RLG00000017402
rosa_multiflora	Rmu_sc0005160.1_g000008
rosa_roxburghii	Rroxscaffold_2G00138430
rosa_rugosa	Rorug02G0126300
rosa_samantha	Rh2AG177000 Rh2AG177100 Rh2BG185100 Rh2CG181400 Rh2DG183200
rosa_wichuraiana	Rw2G013890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	455
AccIII	TCCGGA	1 cut(s)	347
AciI	CCGC	3 cut(s)	46, 284, 864
AclWI	GGATC	2 cut(s)	742, 824
AcsI	RAATTY	3 cut(s)	179, 219, 374
AcuI	CTGAAG	4 cut(s)	38, 67, 327, 832
AfiI	CCNNNNNNNGG	3 cut(s)	694, 936, 1017
AflII	CTTAAG	1 cut(s)	728
AflIII	ACRYGT	2 cut(s)	364, 814
AgsI	TTSAA	2 cut(s)	160, 992
AjiI	CACGTC	1 cut(s)	815
AjnI	CCWGG	5 cut(s)	94, 211, 286, 397, 715
AjuI	GAANNNNNNNTTGG	2 cut(s)	140, 172
AleI	CACNNNNGTG	1 cut(s)	509
AluBI	AGCT	6 cut(s)	87, 428, 623, 727, 921, 975
AluI	AGCT	6 cut(s)	87, 428, 623, 727, 921, 975
Alw21I	GWGCWC	2 cut(s)	553, 715
Alw44I	GTGCAC	1 cut(s)	711
AlwI	GGATC	2 cut(s)	742, 824
Ama87I	CYCGRG	1 cut(s)	546
Aor13HI	TCCGGA	1 cut(s)	347
AoxI	GGCC	1 cut(s)	209
ApaLI	GTGCAC	1 cut(s)	711
ApeKI	GCWGC	3 cut(s)	64, 359, 918
ApoI	RAATTY	3 cut(s)	179, 219, 374
ArsI	GACNNNNNNTTYG	2 cut(s)	136, 168
Asp700I	GAANNNNTTC	1 cut(s)	220
AspLEI	GCGC	2 cut(s)	64, 198
AspS9I	GGNCC	1 cut(s)	302
AsuHPI	GGTGA	6 cut(s)	65, 216, 425, 459, 575, 623
AvaI	CYCGRG	1 cut(s)	546
AvaII	GGWCC	1 cut(s)	302
BaeGI	GKGCMC	1 cut(s)	715
BanI	GGYRCC	1 cut(s)	455
BbsI	GAAGAC	1 cut(s)	1020
Bbv12I	GWGCWC	2 cut(s)	553, 715
BbvI	GCAGC	3 cut(s)	76, 371, 930
BccI	CCATC	2 cut(s)	554, 962
BciT130I	CCWGG	5 cut(s)	96, 213, 288, 399, 717
BfaI	CTAG	2 cut(s)	371, 914
BfrI	CTTAAG	1 cut(s)	728
BisI	GCNGC	3 cut(s)	65, 360, 919
BlsI	GCNGC	3 cut(s)	66, 361, 920
Bme1390I	CCNGG	5 cut(s)	96, 213, 288, 399, 717
Bme18I	GGWCC	1 cut(s)	302
BmeT110I	CYCGRG	1 cut(s)	546
BmgBI	CACGTC	1 cut(s)	815
BmgT120I	GGNCC	1 cut(s)	302
BmiI	GGNNCC	1 cut(s)	457
BmrFI	CCNGG	5 cut(s)	96, 213, 288, 399, 717
BmsI	GCATC	2 cut(s)	105, 894
BoxI	GACNNNNGTC	2 cut(s)	389, 956
BpiI	GAAGAC	1 cut(s)	1020
BpmI	CTGGAG	1 cut(s)	738
BpuEI	CTTGAG	1 cut(s)	575
BsaBI	GATNNNNATC	1 cut(s)	768
BsaJI	CCNNGG	3 cut(s)	94, 287, 529
BsaWI	WCCGGW	1 cut(s)	347
Bsc4I	CCNNNNNNNGG	3 cut(s)	694, 936, 1017
Bse1I	ACTGG	1 cut(s)	833
Bse8I	GATNNNNATC	1 cut(s)	768
BseAI	TCCGGA	1 cut(s)	347
BseBI	CCWGG	5 cut(s)	96, 213, 288, 399, 717
BseDI	CCNNGG	3 cut(s)	94, 287, 529
BseGI	GGATG	1 cut(s)	565
BseJI	GATNNNNATC	1 cut(s)	768
BseLI	CCNNNNNNNGG	3 cut(s)	694, 936, 1017
BseMII	CTCAG	1 cut(s)	1014
BseNI	ACTGG	1 cut(s)	833
BseSI	GKGCMC	1 cut(s)	715
BseXI	GCAGC	3 cut(s)	76, 371, 930
BseYI	CCCAGC	1 cut(s)	380
BsgI	GTGCAG	1 cut(s)	487
BshFI	GGCC	1 cut(s)	211
BshNI	GGYRCC	1 cut(s)	455
BsiHKAI	GWGCWC	2 cut(s)	553, 715
BsiHKCI	CYCGRG	1 cut(s)	546
BsiSI	CCGG	1 cut(s)	348
BslFI	GGGAC	2 cut(s)	397, 953
BslI	CCNNNNNNNGG	3 cut(s)	694, 936, 1017
BsmFI	GGGAC	2 cut(s)	397, 953
BsmI	GAATGC	2 cut(s)	338, 689
BsnI	GGCC	1 cut(s)	211
BsoBI	CYCGRG	1 cut(s)	546
Bsp1286I	GDGCHC	2 cut(s)	553, 715
Bsp13I	TCCGGA	1 cut(s)	347
Bsp143I	GATC	3 cut(s)	244, 747, 829
Bsp19I	CCATGG	1 cut(s)	529
BspACI	CCGC	3 cut(s)	46, 284, 864
BspANI	GGCC	1 cut(s)	211
BspCNI	CTCAG	1 cut(s)	1015
BspEI	TCCGGA	1 cut(s)	347
BspLI	GGNNCC	1 cut(s)	457
BspPI	GGATC	2 cut(s)	742, 824
BspT107I	GGYRCC	1 cut(s)	455
BspTI	CTTAAG	1 cut(s)	728
BsrI	ACTGG	1 cut(s)	833
BssECI	CCNNGG	3 cut(s)	94, 287, 529
BssMI	GATC	3 cut(s)	244, 747, 829
BssT1I	CCWWGG	1 cut(s)	529
Bst2UI	CCWGG	5 cut(s)	96, 213, 288, 399, 717
Bst4CI	ACNGT	4 cut(s)	589, 792, 955, 987
Bst6I	CTCTTC	2 cut(s)	75, 86
BstAFI	CTTAAG	1 cut(s)	728
BstC8I	GCNNGC	4 cut(s)	6, 50, 104, 759
BstDEI	CTNAG	2 cut(s)	206, 1023
BstDSI	CCRYGG	1 cut(s)	529
BstEII	GGTNACC	1 cut(s)	41
BstENI	CCTNNNNNAGG	1 cut(s)	692
BstF5I	GGATG	1 cut(s)	565
BstHHI	GCGC	2 cut(s)	64, 198
BstKTI	GATC	3 cut(s)	247, 750, 832
BstMBI	GATC	3 cut(s)	244, 747, 829
BstMWI	GCNNNNNNNGC	1 cut(s)	10
BstNI	CCWGG	5 cut(s)	96, 213, 288, 399, 717
BstNSI	RCATGY	3 cut(s)	110, 368, 761
BstPAI	GACNNNNGTC	2 cut(s)	389, 956
BstPI	GGTNACC	1 cut(s)	41
BstSCI	CCNGG	5 cut(s)	94, 211, 286, 397, 715
BstSLI	GKGCMC	1 cut(s)	715
BstV1I	GCAGC	3 cut(s)	76, 371, 930
BstV2I	GAAGAC	1 cut(s)	1020
BsuRI	GGCC	1 cut(s)	211
BtgI	CCRYGG	1 cut(s)	529
BtgZI	GCGATG	1 cut(s)	215
BtrI	CACGTC	1 cut(s)	815
BtsCI	GGATG	1 cut(s)	565
BtsIMutI	CAGTG	1 cut(s)	516
Cac8I	GCNNGC	4 cut(s)	6, 50, 104, 759
CfoI	GCGC	2 cut(s)	64, 198
Cfr13I	GGNCC	1 cut(s)	302
CseI	GACGC	1 cut(s)	876
DdeI	CTNAG	2 cut(s)	206, 1023
DpnI	GATC	3 cut(s)	246, 749, 831
DpnII	GATC	3 cut(s)	244, 747, 829
DraI	TTTAAA	1 cut(s)	597
Eam1104I	CTCTTC	2 cut(s)	75, 86
EarI	CTCTTC	2 cut(s)	75, 86
Eco130I	CCWWGG	1 cut(s)	529
Eco147I	AGGCCT	1 cut(s)	211
Eco32I	GATATC	1 cut(s)	605
Eco47I	GGWCC	1 cut(s)	302
Eco57I	CTGAAG	4 cut(s)	38, 67, 327, 832
Eco88I	CYCGRG	1 cut(s)	546
Eco91I	GGTNACC	1 cut(s)	41
EcoNI	CCTNNNNNAGG	1 cut(s)	692
EcoO65I	GGTNACC	1 cut(s)	41
EcoRII	CCWGG	5 cut(s)	94, 211, 286, 397, 715
EcoRV	GATATC	1 cut(s)	605
EcoT14I	CCWWGG	1 cut(s)	529
EcoT22I	ATGCAT	1 cut(s)	338
ErhI	CCWWGG	1 cut(s)	529
FalI	AAGNNNNNCTT	2 cut(s)	672, 704
FaqI	GGGAC	2 cut(s)	397, 953
Fnu4HI	GCNGC	3 cut(s)	65, 360, 919
FokI	GGATG	1 cut(s)	572
Fsp4HI	GCNGC	3 cut(s)	65, 360, 919
FspBI	CTAG	2 cut(s)	371, 914
GlaI	GCGC	2 cut(s)	63, 197
GluI	GCNGC	3 cut(s)	65, 360, 919
GsaI	CCCAGC	1 cut(s)	384
GsuI	CTGGAG	1 cut(s)	738
HaeIII	GGCC	1 cut(s)	211
HapII	CCGG	1 cut(s)	348
HgaI	GACGC	1 cut(s)	876
HhaI	GCGC	2 cut(s)	64, 198
Hin6I	GCGC	2 cut(s)	62, 196
HinP1I	GCGC	2 cut(s)	62, 196
HindIII	AAGCTT	1 cut(s)	973
HinfI	GANTC	1 cut(s)	542
HpaII	CCGG	1 cut(s)	348
HphI	GGTGA	6 cut(s)	65, 216, 425, 459, 575, 623
Hpy166II	GTNNAC	5 cut(s)	302, 433, 514, 713, 880
Hpy188III	TCNNGA	5 cut(s)	242, 348, 371, 546, 850
Hpy8I	GTNNAC	5 cut(s)	302, 433, 514, 713, 880
HpyAV	CCTTC	2 cut(s)	316, 898
HpyCH4III	ACNGT	4 cut(s)	589, 792, 955, 987
HpyCH4IV	ACGT	2 cut(s)	202, 814
HpyF10VI	GCNNNNNNNGC	1 cut(s)	10
HpyF3I	CTNAG	2 cut(s)	206, 1023
HpySE526I	ACGT	2 cut(s)	202, 814
HspAI	GCGC	2 cut(s)	62, 196
Kpn2I	TCCGGA	1 cut(s)	347
Kzo9I	GATC	3 cut(s)	244, 747, 829
LmnI	GCTCC	1 cut(s)	724
Lsp1109I	GCAGC	3 cut(s)	76, 371, 930
LweI	GCATC	2 cut(s)	105, 894
MaeI	CTAG	2 cut(s)	371, 914
MaeII	ACGT	2 cut(s)	202, 814
MaeIII	GTNAC	5 cut(s)	41, 465, 583, 673, 958
MalI	GATC	3 cut(s)	246, 749, 831
MboI	GATC	3 cut(s)	244, 747, 829
MboII	GAAGA	6 cut(s)	62, 73, 177, 622, 977, 1025
MhlI	GDGCHC	2 cut(s)	553, 715
MluCI	AATT	8 cut(s)	179, 219, 374, 417, 444, 570, 735, 946
MmeI	TCCRAC	1 cut(s)	790
MnlI	CCTC	7 cut(s)	35, 78, 270, 355, 480, 550, 646
Mph1103I	ATGCAT	1 cut(s)	338
MroI	TCCGGA	1 cut(s)	347
MroXI	GAANNNNTTC	1 cut(s)	220
MseI	TTAA	4 cut(s)	573, 596, 729, 1004
MslI	CAYNNNNRTG	1 cut(s)	509
MspA1I	CMGCKG	1 cut(s)	921
MspCI	CTTAAG	1 cut(s)	728
MspI	CCGG	1 cut(s)	348
MspR9I	CCNGG	5 cut(s)	96, 213, 288, 399, 717
Mva1269I	GAATGC	2 cut(s)	338, 689
MvaI	CCWGG	5 cut(s)	96, 213, 288, 399, 717
MwoI	GCNNNNNNNGC	1 cut(s)	10
NcoI	CCATGG	1 cut(s)	529
NdeII	GATC	3 cut(s)	244, 747, 829
NlaIV	GGNNCC	1 cut(s)	457
NmuCI	GTSAC	2 cut(s)	465, 958
NsiI	ATGCAT	1 cut(s)	338
NspI	RCATGY	3 cut(s)	110, 368, 761
OliI	CACNNNNGTG	1 cut(s)	509
PaeI	GCATGC	1 cut(s)	761
PceI	AGGCCT	1 cut(s)	211
PciI	ACATGT	1 cut(s)	364
PctI	GAATGC	2 cut(s)	338, 689
PdmI	GAANNNNTTC	1 cut(s)	220
PfeI	GAWTC	1 cut(s)	542
PkrI	GCNGC	3 cut(s)	66, 361, 920
PscI	ACATGT	1 cut(s)	364
PshAI	GACNNNNGTC	2 cut(s)	389, 956
Psp6I	CCWGG	5 cut(s)	94, 211, 286, 397, 715
PspEI	GGTNACC	1 cut(s)	41
PspFI	CCCAGC	1 cut(s)	380
PspGI	CCWGG	5 cut(s)	94, 211, 286, 397, 715
PspN4I	GGNNCC	1 cut(s)	457
PspPI	GGNCC	1 cut(s)	302
PvuII	CAGCTG	1 cut(s)	921
RseI	CAYNNNNRTG	1 cut(s)	509
SaqAI	TTAA	4 cut(s)	573, 596, 729, 1004
SatI	GCNGC	3 cut(s)	65, 360, 919
Sau3AI	GATC	3 cut(s)	244, 747, 829
Sau96I	GGNCC	1 cut(s)	302
ScrFI	CCNGG	5 cut(s)	96, 213, 288, 399, 717
SduI	GDGCHC	2 cut(s)	553, 715
SfaNI	GCATC	2 cut(s)	105, 894
SinI	GGWCC	1 cut(s)	302
SmiI	ATTTAAAT	1 cut(s)	597
SmiMI	CAYNNNNRTG	1 cut(s)	509
SmlI	CTYRAG	2 cut(s)	554, 728
SmoI	CTYRAG	2 cut(s)	554, 728
SphI	GCATGC	1 cut(s)	761
Sse9I	AATT	8 cut(s)	179, 219, 374, 417, 444, 570, 735, 946
SseBI	AGGCCT	1 cut(s)	211
SsiI	CCGC	3 cut(s)	46, 284, 864
SspMI	CTAG	2 cut(s)	371, 914
StuI	AGGCCT	1 cut(s)	211
StyD4I	CCNGG	5 cut(s)	94, 211, 286, 397, 715
StyI	CCWWGG	1 cut(s)	529
SwaI	ATTTAAAT	1 cut(s)	597
TaaI	ACNGT	4 cut(s)	589, 792, 955, 987
TaiI	ACGT	2 cut(s)	205, 817
TaqI	TCGA	2 cut(s)	113, 787
TasI	AATT	8 cut(s)	179, 219, 374, 417, 444, 570, 735, 946
TfiI	GAWTC	1 cut(s)	542
Tru1I	TTAA	4 cut(s)	573, 596, 729, 1004
Tru9I	TTAA	4 cut(s)	573, 596, 729, 1004
TscAI	CASTG	1 cut(s)	516
TseFI	GTSAC	2 cut(s)	465, 958
TseI	GCWGC	3 cut(s)	64, 359, 918
Tsp45I	GTSAC	2 cut(s)	465, 958
TspDTI	ATGAA	3 cut(s)	429, 812, 873
TspRI	CASTG	1 cut(s)	516
Vha464I	CTTAAG	1 cut(s)	728
VneI	GTGCAC	1 cut(s)	711
VpaK11BI	GGWCC	1 cut(s)	302
XagI	CCTNNNNNAGG	1 cut(s)	692
XapI	RAATTY	3 cut(s)	179, 219, 374
XbaI	TCTAGA	1 cut(s)	370
XceI	RCATGY	3 cut(s)	110, 368, 761
XmnI	GAANNNNTTC	1 cut(s)	220
XspI	CTAG	2 cut(s)	371, 914
Zsp2I	ATGCAT	1 cut(s)	338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.