Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G25740 AT3G25740 AT4G37040 |
| fragaria_vesca | FvH4_1g15810 FvH4_1g15810 FvH4_1g15810 FvH4_1g15810 FvH4_1g15810 FvH4_1g15810 |
| malus_domestica | MD00G1045000.v1.1 MD02G1169900.v1.1 |
| prunus_persica | Prupe.7G135200_v2.0.a1 Prupe.7G135300_v2.0.a1 |
| pyrus_communis | pycom02g13680 |
| rosa_chinensis | RchiOBHm_Chr2g0105091 RchiOBHm_Chr5g0066781 |
| rosa_laevigata | RLG00000017402 |
| rosa_multiflora | Rmu_sc0005160.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00138430 |
| rosa_rugosa | Rorug02G0126300 |
| rosa_samantha | Rh2AG177000 Rh2AG177100 Rh2BG185100 Rh2CG181400 Rh2DG183200 |
| rosa_wichuraiana | Rw2G013890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1505 |
| AccII | CGCG | 2 cut(s) | 15, 281 |
| AciI | CCGC | 1 cut(s) | 279 |
| AclI | AACGTT | 1 cut(s) | 1176 |
| AclWI | GGATC | 4 cut(s) | 171, 277, 1291, 1879 |
| AcsI | RAATTY | 5 cut(s) | 580, 649, 1032, 1223, 1236 |
| AcvI | CACGTG | 1 cut(s) | 1619 |
| AcyI | GRCGYC | 1 cut(s) | 1569 |
| AfaI | GTAC | 3 cut(s) | 1307, 1565, 1842 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 874, 1251, 1582, 1873 |
| AflII | CTTAAG | 1 cut(s) | 391 |
| AflIII | ACRYGT | 2 cut(s) | 600, 1302 |
| AjnI | CCWGG | 2 cut(s) | 230, 285 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 117, 149, 420, 452, 1743, 1775 |
| AluBI | AGCT | 7 cut(s) | 992, 1424, 1502, 1694, 1741, 1820, 1838 |
| AluI | AGCT | 7 cut(s) | 992, 1424, 1502, 1694, 1741, 1820, 1838 |
| Alw21I | GWGCWC | 3 cut(s) | 406, 1168, 1696 |
| Alw26I | GTCTC | 2 cut(s) | 117, 904 |
| Alw44I | GTGCAC | 1 cut(s) | 402 |
| AlwI | GGATC | 4 cut(s) | 171, 277, 1291, 1879 |
| AoxI | GGCC | 2 cut(s) | 994, 1531 |
| ApaLI | GTGCAC | 1 cut(s) | 402 |
| ApeKI | GCWGC | 5 cut(s) | 99, 855, 1424, 1703, 1745 |
| ApoI | RAATTY | 5 cut(s) | 580, 649, 1032, 1223, 1236 |
| AseI | ATTAAT | 2 cut(s) | 1061, 1653 |
| AspLEI | GCGC | 3 cut(s) | 15, 17, 417 |
| AspS9I | GGNCC | 4 cut(s) | 276, 777, 995, 1531 |
| AsuC2I | CCSGG | 1 cut(s) | 1773 |
| AsuHPI | GGTGA | 4 cut(s) | 175, 1424, 1786, 1888 |
| AsuII | TTCGAA | 1 cut(s) | 107 |
| AvaII | GGWCC | 2 cut(s) | 276, 777 |
| AxyI | CCTNAGG | 1 cut(s) | 384 |
| BaeGI | GKGCMC | 2 cut(s) | 406, 720 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 589, 622 |
| BanII | GRGCYC | 1 cut(s) | 1696 |
| BbrPI | CACGTG | 1 cut(s) | 1619 |
| BbsI | GAAGAC | 1 cut(s) | 219 |
| Bbv12I | GWGCWC | 3 cut(s) | 406, 1168, 1696 |
| BbvI | GCAGC | 5 cut(s) | 111, 867, 1411, 1690, 1732 |
| BccI | CCATC | 6 cut(s) | 362, 547, 1616, 1725, 1821, 1891 |
| BceAI | ACGGC | 2 cut(s) | 1011, 1582 |
| BciT130I | CCWGG | 2 cut(s) | 232, 287 |
| BciVI | GTATCC | 1 cut(s) | 590 |
| BclI | TGATCA | 1 cut(s) | 1356 |
| BcnI | CCSGG | 1 cut(s) | 1773 |
| BcoDI | GTCTC | 2 cut(s) | 117, 904 |
| BfrI | CTTAAG | 1 cut(s) | 391 |
| BfuAI | ACCTGC | 1 cut(s) | 1505 |
| BfuI | GTATCC | 1 cut(s) | 590 |
| BisI | GCNGC | 5 cut(s) | 100, 856, 1425, 1704, 1746 |
| BlsI | GCNGC | 5 cut(s) | 101, 857, 1426, 1705, 1747 |
| Bme1390I | CCNGG | 3 cut(s) | 232, 287, 1773 |
| Bme18I | GGWCC | 2 cut(s) | 276, 777 |
| BmgT120I | GGNCC | 4 cut(s) | 276, 777, 995, 1531 |
| BmiI | GGNNCC | 2 cut(s) | 759, 1671 |
| BmrFI | CCNGG | 3 cut(s) | 232, 287, 1773 |
| BmsI | GCATC | 8 cut(s) | 688, 830, 919, 1030, 1179, 1310, 1627, 1650 |
| BpiI | GAAGAC | 1 cut(s) | 219 |
| Bpu14I | TTCGAA | 1 cut(s) | 107 |
| BpuEI | CTTGAG | 2 cut(s) | 847, 1652 |
| BpuMI | CCSGG | 1 cut(s) | 1773 |
| BsaAI | YACGTR | 2 cut(s) | 601, 1619 |
| BsaHI | GRCGYC | 1 cut(s) | 1569 |
| BsaJI | CCNNGG | 3 cut(s) | 286, 943, 1867 |
| BsaWI | WCCGGW | 1 cut(s) | 1279 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 874, 1251, 1582, 1873 |
| Bse1I | ACTGG | 2 cut(s) | 1128, 1762 |
| Bse21I | CCTNAGG | 1 cut(s) | 384 |
| Bse3DI | GCAATG | 1 cut(s) | 972 |
| BseBI | CCWGG | 2 cut(s) | 232, 287 |
| BseDI | CCNNGG | 3 cut(s) | 286, 943, 1867 |
| BseGI | GGATG | 8 cut(s) | 703, 821, 1325, 1531, 1572, 1642, 1665, 1837 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 874, 1251, 1582, 1873 |
| BseMI | GCAATG | 1 cut(s) | 972 |
| BseMII | CTCAG | 2 cut(s) | 606, 1002 |
| BseNI | ACTGG | 2 cut(s) | 1128, 1762 |
| BsePI | GCGCGC | 1 cut(s) | 13 |
| BseSI | GKGCMC | 2 cut(s) | 406, 720 |
| BseXI | GCAGC | 5 cut(s) | 111, 867, 1411, 1690, 1732 |
| BseYI | CCCAGC | 3 cut(s) | 1069, 1577, 1781 |
| Bsh1236I | CGCG | 2 cut(s) | 15, 281 |
| BshFI | GGCC | 2 cut(s) | 996, 1533 |
| BsiHKAI | GWGCWC | 3 cut(s) | 406, 1168, 1696 |
| BsiSI | CCGG | 2 cut(s) | 1280, 1772 |
| BslFI | GGGAC | 2 cut(s) | 1474, 1930 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 874, 1251, 1582, 1873 |
| BsmAI | GTCTC | 2 cut(s) | 117, 904 |
| BsmFI | GGGAC | 2 cut(s) | 1474, 1930 |
| BsmI | GAATGC | 5 cut(s) | 315, 1096, 1161, 1294, 1410 |
| BsnI | GGCC | 2 cut(s) | 996, 1533 |
| Bsp119I | TTCGAA | 1 cut(s) | 107 |
| Bsp1286I | GDGCHC | 4 cut(s) | 406, 720, 1168, 1696 |
| Bsp143I | GATC | 6 cut(s) | 163, 282, 588, 1296, 1356, 1871 |
| BspACI | CCGC | 1 cut(s) | 279 |
| BspANI | GGCC | 2 cut(s) | 996, 1533 |
| BspCNI | CTCAG | 2 cut(s) | 605, 1001 |
| BspFNI | CGCG | 2 cut(s) | 15, 281 |
| BspHI | TCATGA | 2 cut(s) | 814, 1036 |
| BspLI | GGNNCC | 2 cut(s) | 759, 1671 |
| BspMI | ACCTGC | 1 cut(s) | 1505 |
| BspPI | GGATC | 4 cut(s) | 171, 277, 1291, 1879 |
| BspQI | GCTCTTC | 2 cut(s) | 1414, 1434 |
| BspT104I | TTCGAA | 1 cut(s) | 107 |
| BspTI | CTTAAG | 1 cut(s) | 391 |
| BsrDI | GCAATG | 1 cut(s) | 972 |
| BsrI | ACTGG | 2 cut(s) | 1128, 1762 |
| BssECI | CCNNGG | 3 cut(s) | 286, 943, 1867 |
| BssHII | GCGCGC | 1 cut(s) | 13 |
| BssMI | GATC | 6 cut(s) | 163, 282, 588, 1296, 1356, 1871 |
| BssNI | GRCGYC | 1 cut(s) | 1569 |
| BssT1I | CCWWGG | 1 cut(s) | 1867 |
| Bst2UI | CCWGG | 2 cut(s) | 232, 287 |
| Bst4CI | ACNGT | 7 cut(s) | 408, 691, 722, 892, 947, 1145, 1550 |
| Bst6I | CTCTTC | 3 cut(s) | 556, 1414, 1434 |
| BstACI | GRCGYC | 1 cut(s) | 1569 |
| BstAFI | CTTAAG | 1 cut(s) | 391 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 310, 1742 |
| BstBAI | YACGTR | 2 cut(s) | 601, 1619 |
| BstBI | TTCGAA | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 9 cut(s) | 15, 994, 1168, 1209, 1213, 1597, 1614, 1708, 1743 |
| BstDEI | CTNAG | 3 cut(s) | 384, 592, 988 |
| BstDSI | CCRYGG | 1 cut(s) | 943 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1249 |
| BstF5I | GGATG | 8 cut(s) | 703, 821, 1325, 1531, 1572, 1642, 1665, 1837 |
| BstFNI | CGCG | 2 cut(s) | 15, 281 |
| BstHHI | GCGC | 3 cut(s) | 15, 17, 417 |
| BstKTI | GATC | 6 cut(s) | 166, 285, 591, 1299, 1359, 1874 |
| BstMAI | GTCTC | 2 cut(s) | 117, 904 |
| BstMBI | GATC | 6 cut(s) | 163, 282, 588, 1296, 1356, 1871 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 23, 278, 310, 998, 1669, 1700, 1712, 1742 |
| BstNI | CCWGG | 2 cut(s) | 232, 287 |
| BstNSI | RCATGY | 5 cut(s) | 134, 402, 1306, 1612, 1710 |
| BstSCI | CCNGG | 3 cut(s) | 230, 285, 1771 |
| BstSLI | GKGCMC | 2 cut(s) | 406, 720 |
| BstUI | CGCG | 2 cut(s) | 15, 281 |
| BstV1I | GCAGC | 5 cut(s) | 111, 867, 1411, 1690, 1732 |
| BstV2I | GAAGAC | 1 cut(s) | 219 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 950, 992 |
| Bsu36I | CCTNAGG | 1 cut(s) | 384 |
| BsuI | GTATCC | 1 cut(s) | 590 |
| BsuRI | GGCC | 2 cut(s) | 996, 1533 |
| BtgI | CCRYGG | 1 cut(s) | 943 |
| BtsCI | GGATG | 8 cut(s) | 703, 821, 1325, 1531, 1572, 1642, 1665, 1837 |
| BtsIMutI | CAGTG | 2 cut(s) | 718, 1292 |
| BveI | ACCTGC | 1 cut(s) | 1505 |
| Cac8I | GCNNGC | 9 cut(s) | 15, 994, 1168, 1209, 1213, 1597, 1614, 1708, 1743 |
| CciI | TCATGA | 2 cut(s) | 814, 1036 |
| CfoI | GCGC | 3 cut(s) | 15, 17, 417 |
| Cfr13I | GGNCC | 4 cut(s) | 276, 777, 995, 1531 |
| CseI | GACGC | 1 cut(s) | 1558 |
| Csp6I | GTAC | 3 cut(s) | 1306, 1564, 1841 |
| CviQI | GTAC | 3 cut(s) | 1306, 1564, 1841 |
| DdeI | CTNAG | 3 cut(s) | 384, 592, 988 |
| DpnI | GATC | 6 cut(s) | 165, 284, 590, 1298, 1358, 1873 |
| DpnII | GATC | 6 cut(s) | 163, 282, 588, 1296, 1356, 1871 |
| DraI | TTTAAA | 1 cut(s) | 1057 |
| Eam1104I | CTCTTC | 3 cut(s) | 556, 1414, 1434 |
| EarI | CTCTTC | 3 cut(s) | 556, 1414, 1434 |
| Ecl136II | GAGCTC | 1 cut(s) | 1694 |
| Eco130I | CCWWGG | 1 cut(s) | 1867 |
| Eco24I | GRGCYC | 1 cut(s) | 1696 |
| Eco32I | GATATC | 1 cut(s) | 789 |
| Eco47I | GGWCC | 2 cut(s) | 276, 777 |
| Eco53kI | GAGCTC | 1 cut(s) | 1694 |
| Eco72I | CACGTG | 1 cut(s) | 1619 |
| Eco81I | CCTNAGG | 1 cut(s) | 384 |
| EcoICRI | GAGCTC | 1 cut(s) | 1694 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1249 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1531 |
| EcoRI | GAATTC | 2 cut(s) | 580, 1032 |
| EcoRII | CCWGG | 2 cut(s) | 230, 285 |
| EcoRV | GATATC | 1 cut(s) | 789 |
| EcoT14I | CCWWGG | 1 cut(s) | 1867 |
| EcoT22I | ATGCAT | 3 cut(s) | 315, 1325, 1410 |
| EcoT38I | GRGCYC | 1 cut(s) | 1696 |
| ErhI | CCWWGG | 1 cut(s) | 1867 |
| FaqI | GGGAC | 2 cut(s) | 1474, 1930 |
| FauNDI | CATATG | 1 cut(s) | 334 |
| FbaI | TGATCA | 1 cut(s) | 1356 |
| Fnu4HI | GCNGC | 5 cut(s) | 100, 856, 1425, 1704, 1746 |
| FokI | GGATG | 8 cut(s) | 710, 808, 1332, 1538, 1559, 1649, 1672, 1844 |
| FriOI | GRGCYC | 1 cut(s) | 1696 |
| Fsp4HI | GCNGC | 5 cut(s) | 100, 856, 1425, 1704, 1746 |
| GlaI | GCGC | 3 cut(s) | 14, 16, 416 |
| GluI | GCNGC | 5 cut(s) | 100, 856, 1425, 1704, 1746 |
| GsaI | CCCAGC | 3 cut(s) | 1073, 1581, 1785 |
| HaeIII | GGCC | 2 cut(s) | 996, 1533 |
| HapII | CCGG | 2 cut(s) | 1280, 1772 |
| HgaI | GACGC | 1 cut(s) | 1558 |
| HhaI | GCGC | 3 cut(s) | 15, 17, 417 |
| Hin1I | GRCGYC | 1 cut(s) | 1569 |
| Hin6I | GCGC | 3 cut(s) | 13, 15, 415 |
| HinP1I | GCGC | 3 cut(s) | 13, 15, 415 |
| HincII | GTYRAC | 5 cut(s) | 865, 1008, 1180, 1606, 1628 |
| HindII | GTYRAC | 5 cut(s) | 865, 1008, 1180, 1606, 1628 |
| HindIII | AAGCTT | 1 cut(s) | 1739 |
| HinfI | GANTC | 7 cut(s) | 291, 738, 811, 878, 965, 1099, 1450 |
| HpaII | CCGG | 2 cut(s) | 1280, 1772 |
| HphI | GGTGA | 4 cut(s) | 175, 1424, 1786, 1888 |
| Hpy166II | GTNNAC | 9 cut(s) | 42, 85, 404, 439, 865, 1008, 1180, 1606, 1628 |
| Hpy188I | TCNGA | 2 cut(s) | 73, 1151 |
| Hpy188III | TCNNGA | 5 cut(s) | 594, 792, 815, 1037, 1887 |
| Hpy8I | GTNNAC | 9 cut(s) | 42, 85, 404, 439, 865, 1008, 1180, 1606, 1628 |
| HpyAV | CCTTC | 6 cut(s) | 72, 78, 1255, 1445, 1544, 1552 |
| HpyCH4III | ACNGT | 7 cut(s) | 408, 691, 722, 892, 947, 1145, 1550 |
| HpyCH4IV | ACGT | 3 cut(s) | 600, 1176, 1618 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 23, 278, 310, 998, 1669, 1700, 1712, 1742 |
| HpyF3I | CTNAG | 3 cut(s) | 384, 592, 988 |
| HpySE526I | ACGT | 3 cut(s) | 600, 1176, 1618 |
| Hsp92I | GRCGYC | 1 cut(s) | 1569 |
| HspAI | GCGC | 3 cut(s) | 13, 15, 415 |
| Ksp22I | TGATCA | 1 cut(s) | 1356 |
| Kzo9I | GATC | 6 cut(s) | 163, 282, 588, 1296, 1356, 1871 |
| LguI | GCTCTTC | 2 cut(s) | 1414, 1434 |
| LmnI | GCTCC | 3 cut(s) | 757, 1669, 1691 |
| Lsp1109I | GCAGC | 5 cut(s) | 111, 867, 1411, 1690, 1732 |
| LweI | GCATC | 8 cut(s) | 688, 830, 919, 1030, 1179, 1310, 1627, 1650 |
| MaeII | ACGT | 3 cut(s) | 600, 1176, 1618 |
| MaeIII | GTNAC | 6 cut(s) | 181, 676, 722, 1477, 1508, 1792 |
| MalI | GATC | 6 cut(s) | 165, 284, 590, 1298, 1358, 1873 |
| MboI | GATC | 6 cut(s) | 163, 282, 588, 1296, 1356, 1871 |
| MboII | GAAGA | 9 cut(s) | 219, 329, 467, 573, 1139, 1164, 1421, 1431, 1836 |
| MhlI | GDGCHC | 4 cut(s) | 406, 720, 1168, 1696 |
| MlyI | GAGTC | 1 cut(s) | 820 |
| MmeI | TCCRAC | 2 cut(s) | 141, 1374 |
| MnlI | CCTC | 7 cut(s) | 294, 511, 721, 822, 1388, 1522, 1627 |
| Mph1103I | ATGCAT | 3 cut(s) | 315, 1325, 1410 |
| MseI | TTAA | 8 cut(s) | 254, 392, 471, 753, 1056, 1061, 1653, 1728 |
| MslI | CAYNNNNRTG | 4 cut(s) | 444, 948, 1413, 1722 |
| MspA1I | CMGCKG | 1 cut(s) | 992 |
| MspCI | CTTAAG | 1 cut(s) | 391 |
| MspI | CCGG | 2 cut(s) | 1280, 1772 |
| MspR9I | CCNGG | 3 cut(s) | 232, 287, 1773 |
| Mva1269I | GAATGC | 5 cut(s) | 315, 1096, 1161, 1294, 1410 |
| MvaI | CCWGG | 2 cut(s) | 232, 287 |
| MvnI | CGCG | 2 cut(s) | 15, 281 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 23, 278, 310, 998, 1669, 1700, 1712, 1742 |
| NciI | CCSGG | 1 cut(s) | 1773 |
| NdeI | CATATG | 1 cut(s) | 334 |
| NdeII | GATC | 6 cut(s) | 163, 282, 588, 1296, 1356, 1871 |
| NlaIV | GGNNCC | 2 cut(s) | 759, 1671 |
| NmuCI | GTSAC | 4 cut(s) | 181, 676, 1508, 1792 |
| NsiI | ATGCAT | 3 cut(s) | 315, 1325, 1410 |
| NspI | RCATGY | 5 cut(s) | 134, 402, 1306, 1612, 1710 |
| NspV | TTCGAA | 1 cut(s) | 107 |
| PaeI | GCATGC | 1 cut(s) | 1710 |
| PagI | TCATGA | 2 cut(s) | 814, 1036 |
| PauI | GCGCGC | 1 cut(s) | 13 |
| PciI | ACATGT | 1 cut(s) | 1302 |
| PciSI | GCTCTTC | 2 cut(s) | 1414, 1434 |
| PctI | GAATGC | 5 cut(s) | 315, 1096, 1161, 1294, 1410 |
| PfeI | GAWTC | 6 cut(s) | 291, 738, 878, 965, 1099, 1450 |
| PfoI | TCCNGGA | 1 cut(s) | 230 |
| PkrI | GCNGC | 5 cut(s) | 101, 857, 1426, 1705, 1747 |
| PleI | GAGTC | 1 cut(s) | 819 |
| PmaCI | CACGTG | 1 cut(s) | 1619 |
| PmlI | CACGTG | 1 cut(s) | 1619 |
| PpsI | GAGTC | 1 cut(s) | 819 |
| Ppu21I | YACGTR | 2 cut(s) | 601, 1619 |
| PscI | ACATGT | 1 cut(s) | 1302 |
| PshBI | ATTAAT | 2 cut(s) | 1061, 1653 |
| Psp124BI | GAGCTC | 1 cut(s) | 1696 |
| Psp1406I | AACGTT | 1 cut(s) | 1176 |
| Psp6I | CCWGG | 2 cut(s) | 230, 285 |
| PspCI | CACGTG | 1 cut(s) | 1619 |
| PspFI | CCCAGC | 3 cut(s) | 1069, 1577, 1781 |
| PspGI | CCWGG | 2 cut(s) | 230, 285 |
| PspN4I | GGNNCC | 2 cut(s) | 759, 1671 |
| PspPI | GGNCC | 4 cut(s) | 276, 777, 995, 1531 |
| PteI | GCGCGC | 1 cut(s) | 13 |
| PvuII | CAGCTG | 1 cut(s) | 992 |
| RsaI | GTAC | 3 cut(s) | 1307, 1565, 1842 |
| RsaNI | GTAC | 3 cut(s) | 1306, 1564, 1841 |
| RseI | CAYNNNNRTG | 4 cut(s) | 444, 948, 1413, 1722 |
| SacI | GAGCTC | 1 cut(s) | 1696 |
| SapI | GCTCTTC | 2 cut(s) | 1414, 1434 |
| SaqAI | TTAA | 8 cut(s) | 254, 392, 471, 753, 1056, 1061, 1653, 1728 |
| SatI | GCNGC | 5 cut(s) | 100, 856, 1425, 1704, 1746 |
| Sau3AI | GATC | 6 cut(s) | 163, 282, 588, 1296, 1356, 1871 |
| Sau96I | GGNCC | 4 cut(s) | 276, 777, 995, 1531 |
| SchI | GAGTC | 1 cut(s) | 820 |
| ScrFI | CCNGG | 3 cut(s) | 232, 287, 1773 |
| SduI | GDGCHC | 4 cut(s) | 406, 720, 1168, 1696 |
| SfaNI | GCATC | 8 cut(s) | 688, 830, 919, 1030, 1179, 1310, 1627, 1650 |
| SfuI | TTCGAA | 1 cut(s) | 107 |
| SinI | GGWCC | 2 cut(s) | 276, 777 |
| SmiI | ATTTAAAT | 1 cut(s) | 1057 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 444, 948, 1413, 1722 |
| SmlI | CTYRAG | 3 cut(s) | 391, 826, 1631 |
| SmoI | CTYRAG | 3 cut(s) | 391, 826, 1631 |
| SphI | GCATGC | 1 cut(s) | 1710 |
| SsiI | CCGC | 1 cut(s) | 279 |
| SstI | GAGCTC | 1 cut(s) | 1696 |
| StyD4I | CCNGG | 3 cut(s) | 230, 285, 1771 |
| StyI | CCWWGG | 1 cut(s) | 1867 |
| SwaI | ATTTAAAT | 1 cut(s) | 1057 |
| TaaI | ACNGT | 7 cut(s) | 408, 691, 722, 892, 947, 1145, 1550 |
| TaiI | ACGT | 3 cut(s) | 603, 1179, 1621 |
| TaqI | TCGA | 3 cut(s) | 22, 107, 299 |
| TatI | WGTACW | 1 cut(s) | 1305 |
| TfiI | GAWTC | 6 cut(s) | 291, 738, 878, 965, 1099, 1450 |
| Tru1I | TTAA | 8 cut(s) | 254, 392, 471, 753, 1056, 1061, 1653, 1728 |
| Tru9I | TTAA | 8 cut(s) | 254, 392, 471, 753, 1056, 1061, 1653, 1728 |
| TscAI | CASTG | 2 cut(s) | 725, 1299 |
| TseFI | GTSAC | 4 cut(s) | 181, 676, 1508, 1792 |
| TseI | GCWGC | 5 cut(s) | 99, 855, 1424, 1703, 1745 |
| Tsp45I | GTSAC | 4 cut(s) | 181, 676, 1508, 1792 |
| TspGWI | ACGGA | 1 cut(s) | 321 |
| TspRI | CASTG | 2 cut(s) | 725, 1299 |
| Vha464I | CTTAAG | 1 cut(s) | 391 |
| VneI | GTGCAC | 1 cut(s) | 402 |
| VpaK11BI | GGWCC | 2 cut(s) | 276, 777 |
| VspI | ATTAAT | 2 cut(s) | 1061, 1653 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1249 |
| XapI | RAATTY | 5 cut(s) | 580, 649, 1032, 1223, 1236 |
| XceI | RCATGY | 5 cut(s) | 134, 402, 1306, 1612, 1710 |
| Zsp2I | ATGCAT | 3 cut(s) | 315, 1325, 1410 |