Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0011174

Physical Location & Seq

Genomic Coordinates Reverse (-)

18154179 .. 18156419

Gene Structure 2241 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G189200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 651 bp

ATGGAAGAAAAATCTCAAGCTGGTGATGTGAAGAATACCCCAGAGATGGAGGAAAAGGTGGTTGGCCAAAGCCAGCCTATGAAAACAGAGGAAGAAGCAGCTAAAGAAAAGGACCCATCTTCTTCCCATGATCTGCCCAACAACAGCAACACCACCAGAAAGATCATGCCGGCTCAGCTTACCATCTTCTATGCTGGGAGTGTTAGCGTCTTTGATGCAGTTACTGCAGAAAAGGTTCGTGAACTTATGCTTATTGCAGCAGCTGATGCTGCAAATAAGACTGCTGATGTTAAGAATGGTGGGACAAGCGGTCCACCAAGTCCACTAGTTTGTACAGGGTCATCTTCGCTGCAAAACTCTGCTCCTGGTTCACCAGTGGTCCAGCCCTACCCTGATCAGAAGAGTTCCATTTGCAAACTGCAAGCTGAATTTCCCATAGCAAGGAGACACTCTCTTCAGCGCTTCCTGGAGAAGCGACGGGACAGGTTGGTCAGCAAGAATCCATATCCTACTTCACCCGCAACACAGCTGGATGACGATGCTAAAATTAACCTCAGCAATAATGCCTCTCCAGGTTTGGGTTGCTTCAAACAATCTGCCATGGTGAAGGAGGAAATGCAACCAAGTTCTGCTACTGCCTACCCAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003712 GO:0003714 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006950 GO:0008150 GO:0009611 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0010556 GO:0010558 GO:0010605 GO:0010646 GO:0019219 GO:0019222 GO:0023051 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045934 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0140110 GO:1902679 GO:1903506 GO:1903507 GO:2000022 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

CCT_2 tify

Protein Analysis

217

Amino Acids

23.21

Weight (kDa)

6.18

Isoelectric Point (pI)

65.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43440 AT3G43440 AT5G20900
fragaria_vesca	FvH4_1g09690
malus_domestica	MD02G1105900.v1.1 MD15G1225800.v1.1
prunus_persica	Prupe.7G189200_v2.0.a1
pyrus_communis	pycom02g08380 pycom15g20070
rosa_chinensis	RchiOBHm_Chr2g0096551
rosa_laevigata	RLG00000016648
rosa_multiflora	Rmu_sc0004096.1_g000006
rosa_roxburghii	Rroxscaffold_2G00145540
rosa_rugosa	Rorug02G0058400 Rorug02G0058400
rosa_samantha	Rh2AG105600 Rh2BG108100 Rh2CG109900 Rh2DG108700
rosa_wichuraiana	Rw2G008170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	488
AciI	CCGC	2 cut(s)	309, 519
AcoI	YGGCCR	1 cut(s)	64
AcsI	RAATTY	1 cut(s)	428
AcuI	CTGAAG	1 cut(s)	440
AfaI	GTAC	1 cut(s)	334
AfeI	AGCGCT	1 cut(s)	461
AfiI	CCNNNNNNNGG	3 cut(s)	46, 441, 578
AgsI	TTSAA	1 cut(s)	589
AhdI	GACNNNNNGTC	1 cut(s)	309
AhlI	ACTAGT	1 cut(s)	325
AjnI	CCWGG	3 cut(s)	364, 465, 571
AjuI	GAANNNNNNNTTGG	2 cut(s)	45, 77
AluBI	AGCT	7 cut(s)	20, 101, 178, 263, 425, 529, 647
AluI	AGCT	7 cut(s)	20, 101, 178, 263, 425, 529, 647
Alw26I	GTCTC	1 cut(s)	439
AlwNI	CAGNNNCTG	2 cut(s)	224, 263
Aor51HI	AGCGCT	1 cut(s)	461
AoxI	GGCC	1 cut(s)	64
ApeKI	GCWGC	5 cut(s)	98, 257, 260, 269, 349
ApoI	RAATTY	1 cut(s)	428
Asp700I	GAANNNNTTC	1 cut(s)	234
AspLEI	GCGC	1 cut(s)	462
AspS9I	GGNCC	3 cut(s)	112, 311, 379
AsuHPI	GGTGA	4 cut(s)	35, 363, 507, 616
AvaII	GGWCC	3 cut(s)	112, 311, 379
BalI	TGGCCA	1 cut(s)	66
BbvCI	CCTCAGC	1 cut(s)	554
BbvI	GCAGC	5 cut(s)	110, 256, 269, 272, 336
BccI	CCATC	3 cut(s)	40, 124, 191
BciT130I	CCWGG	3 cut(s)	366, 467, 573
BclI	TGATCA	1 cut(s)	394
BcoDI	GTCTC	1 cut(s)	439
BcuI	ACTAGT	1 cut(s)	325
BfaI	CTAG	1 cut(s)	326
BfmI	CTRYAG	1 cut(s)	225
BfoI	RGCGCY	1 cut(s)	463
BisI	GCNGC	5 cut(s)	99, 258, 261, 270, 350
BlpI	GCTNAGC	1 cut(s)	174
BlsI	GCNGC	5 cut(s)	100, 259, 262, 271, 351
Bme1390I	CCNGG	3 cut(s)	366, 467, 573
Bme18I	GGWCC	3 cut(s)	112, 311, 379
BmeRI	GACNNNNNGTC	1 cut(s)	309
BmgT120I	GGNCC	3 cut(s)	112, 311, 379
BmiI	GGNNCC	1 cut(s)	114
BmrFI	CCNGG	3 cut(s)	366, 467, 573
BmsI	GCATC	3 cut(s)	205, 256, 529
BplI	GAGNNNNNCTC	2 cut(s)	436, 468
BpmI	CTGGAG	2 cut(s)	488, 555
Bpu10I	CCTNAGC	1 cut(s)	554
Bpu1102I	GCTNAGC	1 cut(s)	174
BsaJI	CCNNGG	1 cut(s)	600
Bsc4I	CCNNNNNNNGG	3 cut(s)	46, 441, 578
Bse118I	RCCGGY	1 cut(s)	169
Bse1I	ACTGG	1 cut(s)	374
BseBI	CCWGG	3 cut(s)	366, 467, 573
BseDI	CCNNGG	1 cut(s)	600
BseGI	GGATG	1 cut(s)	538
BseLI	CCNNNNNNNGG	3 cut(s)	46, 441, 578
BseMII	CTCAG	2 cut(s)	188, 568
BseNI	ACTGG	1 cut(s)	374
BseXI	GCAGC	5 cut(s)	110, 256, 269, 272, 336
BseYI	CCCAGC	2 cut(s)	194, 643
BshFI	GGCC	1 cut(s)	66
BsiSI	CCGG	1 cut(s)	170
BslFI	GGGAC	2 cut(s)	316, 494
BslI	CCNNNNNNNGG	3 cut(s)	46, 441, 578
BsmAI	GTCTC	1 cut(s)	439
BsmFI	GGGAC	2 cut(s)	316, 494
BsnI	GGCC	1 cut(s)	66
Bsp1407I	TGTACA	1 cut(s)	332
Bsp143I	GATC	3 cut(s)	130, 162, 394
Bsp1720I	GCTNAGC	1 cut(s)	174
Bsp19I	CCATGG	1 cut(s)	600
BspACI	CCGC	2 cut(s)	309, 519
BspANI	GGCC	1 cut(s)	66
BspCNI	CTCAG	2 cut(s)	187, 567
BspLI	GGNNCC	1 cut(s)	114
BspMAI	CTGCAG	1 cut(s)	229
BsrFI	RCCGGY	1 cut(s)	169
BsrGI	TGTACA	1 cut(s)	332
BsrI	ACTGG	1 cut(s)	374
BssAI	RCCGGY	1 cut(s)	169
BssECI	CCNNGG	1 cut(s)	600
BssMI	GATC	3 cut(s)	130, 162, 394
BssT1I	CCWWGG	1 cut(s)	600
Bst2UI	CCWGG	3 cut(s)	366, 467, 573
Bst6I	CTCTTC	2 cut(s)	395, 459
BstAPI	GCANNNNNTGC	2 cut(s)	224, 266
BstAUI	TGTACA	1 cut(s)	332
BstC8I	GCNNGC	3 cut(s)	74, 171, 423
BstDEI	CTNAG	2 cut(s)	174, 554
BstDSI	CCRYGG	1 cut(s)	600
BstF5I	GGATG	1 cut(s)	538
BstH2I	RGCGCY	1 cut(s)	463
BstHHI	GCGC	1 cut(s)	462
BstKTI	GATC	3 cut(s)	133, 165, 397
BstMAI	GTCTC	1 cut(s)	439
BstMBI	GATC	3 cut(s)	130, 162, 394
BstMWI	GCNNNNNNNGC	5 cut(s)	175, 224, 266, 269, 644
BstNI	CCWGG	3 cut(s)	366, 467, 573
BstSCI	CCNGG	3 cut(s)	364, 465, 571
BstSFI	CTRYAG	1 cut(s)	225
BstV1I	GCAGC	5 cut(s)	110, 256, 269, 272, 336
BsuRI	GGCC	1 cut(s)	66
BtgI	CCRYGG	1 cut(s)	600
BtsCI	GGATG	1 cut(s)	538
BtsIMutI	CAGTG	1 cut(s)	381
Cac8I	GCNNGC	3 cut(s)	74, 171, 423
CaiI	CAGNNNCTG	2 cut(s)	224, 263
CfoI	GCGC	1 cut(s)	462
Cfr10I	RCCGGY	1 cut(s)	169
Cfr13I	GGNCC	3 cut(s)	112, 311, 379
CseI	GACGC	1 cut(s)	196
Csp6I	GTAC	1 cut(s)	333
CviAII	CATG	3 cut(s)	128, 166, 601
CviQI	GTAC	1 cut(s)	333
DdeI	CTNAG	2 cut(s)	174, 554
DpnI	GATC	3 cut(s)	132, 164, 396
DpnII	GATC	3 cut(s)	130, 162, 394
DrdI	GACNNNNNNGTC	1 cut(s)	488
DriI	GACNNNNNGTC	1 cut(s)	309
DseDI	GACNNNNNNGTC	1 cut(s)	488
EaeI	YGGCCR	1 cut(s)	64
Eam1104I	CTCTTC	2 cut(s)	395, 459
Eam1105I	GACNNNNNGTC	1 cut(s)	309
EarI	CTCTTC	2 cut(s)	395, 459
Eco130I	CCWWGG	1 cut(s)	600
Eco47I	GGWCC	3 cut(s)	112, 311, 379
Eco47III	AGCGCT	1 cut(s)	461
Eco57I	CTGAAG	1 cut(s)	440
EcoO109I	RGGNCCY	1 cut(s)	112
EcoRII	CCWGG	3 cut(s)	364, 465, 571
EcoT14I	CCWWGG	1 cut(s)	600
ErhI	CCWWGG	1 cut(s)	600
FaeI	CATG	3 cut(s)	131, 169, 604
FaiI	YATR	8 cut(s)	80, 129, 167, 192, 248, 437, 505, 602
FaqI	GGGAC	2 cut(s)	316, 494
FatI	CATG	3 cut(s)	127, 165, 600
FauI	CCCGC	1 cut(s)	526
FbaI	TGATCA	1 cut(s)	394
Fnu4HI	GCNGC	5 cut(s)	99, 258, 261, 270, 350
FokI	GGATG	1 cut(s)	545
Fsp4HI	GCNGC	5 cut(s)	99, 258, 261, 270, 350
FspBI	CTAG	1 cut(s)	326
GlaI	GCGC	1 cut(s)	461
GluI	GCNGC	5 cut(s)	99, 258, 261, 270, 350
GsaI	CCCAGC	2 cut(s)	198, 647
GsuI	CTGGAG	2 cut(s)	488, 555
HaeII	RGCGCY	1 cut(s)	463
HaeIII	GGCC	1 cut(s)	66
HapII	CCGG	1 cut(s)	170
HgaI	GACGC	1 cut(s)	196
HhaI	GCGC	1 cut(s)	462
Hin1II	CATG	3 cut(s)	131, 169, 604
Hin6I	GCGC	1 cut(s)	460
HinP1I	GCGC	1 cut(s)	460
HinfI	GANTC	1 cut(s)	499
HpaII	CCGG	1 cut(s)	170
HphI	GGTGA	4 cut(s)	35, 363, 507, 616
Hpy166II	GTNNAC	4 cut(s)	242, 314, 323, 371
Hpy188I	TCNGA	1 cut(s)	399
Hpy188III	TCNNGA	1 cut(s)	239
Hpy8I	GTNNAC	4 cut(s)	242, 314, 323, 371
Hpy99I	CGWCG	1 cut(s)	480
HpyAV	CCTTC	1 cut(s)	601
HpyCH4V	TGCA	8 cut(s)	218, 227, 257, 272, 352, 414, 421, 619
HpyF10VI	GCNNNNNNNGC	5 cut(s)	175, 224, 266, 269, 644
HpyF3I	CTNAG	2 cut(s)	174, 554
Hsp92II	CATG	3 cut(s)	131, 169, 604
HspAI	GCGC	1 cut(s)	460
KroI	GCCGGC	1 cut(s)	169
KroNI	GCCGGC	1 cut(s)	171
Ksp22I	TGATCA	1 cut(s)	394
Kzo9I	GATC	3 cut(s)	130, 162, 394
LmnI	GCTCC	1 cut(s)	367
Lsp1109I	GCAGC	5 cut(s)	110, 256, 269, 272, 336
LweI	GCATC	3 cut(s)	205, 256, 529
MaeI	CTAG	1 cut(s)	326
MaeIII	GTNAC	1 cut(s)	220
MalI	GATC	3 cut(s)	132, 164, 396
MboI	GATC	3 cut(s)	130, 162, 394
MboII	GAAGA	9 cut(s)	17, 43, 104, 111, 114, 178, 336, 412, 446
MlsI	TGGCCA	1 cut(s)	66
MluCI	AATT	2 cut(s)	428, 546
MluNI	TGGCCA	1 cut(s)	66
MnlI	CCTC	5 cut(s)	43, 82, 563, 577, 604
Mox20I	TGGCCA	1 cut(s)	66
MroNI	GCCGGC	1 cut(s)	169
MroXI	GAANNNNTTC	1 cut(s)	234
MscI	TGGCCA	1 cut(s)	66
MseI	TTAA	2 cut(s)	291, 549
Msp20I	TGGCCA	1 cut(s)	66
MspA1I	CMGCKG	2 cut(s)	263, 529
MspI	CCGG	1 cut(s)	170
MspR9I	CCNGG	3 cut(s)	366, 467, 573
MvaI	CCWGG	3 cut(s)	366, 467, 573
MwoI	GCNNNNNNNGC	5 cut(s)	175, 224, 266, 269, 644
NaeI	GCCGGC	1 cut(s)	171
NcoI	CCATGG	1 cut(s)	600
NdeII	GATC	3 cut(s)	130, 162, 394
NgoMIV	GCCGGC	1 cut(s)	169
NlaIII	CATG	3 cut(s)	131, 169, 604
NlaIV	GGNNCC	1 cut(s)	114
PdiI	GCCGGC	1 cut(s)	171
PdmI	GAANNNNTTC	1 cut(s)	234
PfeI	GAWTC	1 cut(s)	499
PfoI	TCCNGGA	1 cut(s)	465
PkrI	GCNGC	5 cut(s)	100, 259, 262, 271, 351
PpuMI	RGGWCCY	1 cut(s)	112
Psp5II	RGGWCCY	1 cut(s)	112
Psp6I	CCWGG	3 cut(s)	364, 465, 571
PspFI	CCCAGC	2 cut(s)	194, 643
PspGI	CCWGG	3 cut(s)	364, 465, 571
PspN4I	GGNNCC	1 cut(s)	114
PspPI	GGNCC	3 cut(s)	112, 311, 379
PspPPI	RGGWCCY	1 cut(s)	112
PstI	CTGCAG	1 cut(s)	229
PstNI	CAGNNNCTG	2 cut(s)	224, 263
PvuII	CAGCTG	2 cut(s)	263, 529
RsaI	GTAC	1 cut(s)	334
RsaNI	GTAC	1 cut(s)	333
SaqAI	TTAA	2 cut(s)	291, 549
SatI	GCNGC	5 cut(s)	99, 258, 261, 270, 350
Sau3AI	GATC	3 cut(s)	130, 162, 394
Sau96I	GGNCC	3 cut(s)	112, 311, 379
ScrFI	CCNGG	3 cut(s)	366, 467, 573
SfaNI	GCATC	3 cut(s)	205, 256, 529
SfcI	CTRYAG	1 cut(s)	225
SinI	GGWCC	3 cut(s)	112, 311, 379
SmlI	CTYRAG	1 cut(s)	15
SmoI	CTYRAG	1 cut(s)	15
SpeI	ACTAGT	1 cut(s)	325
Sse9I	AATT	2 cut(s)	428, 546
SsiI	CCGC	2 cut(s)	309, 519
SspMI	CTAG	1 cut(s)	326
StyD4I	CCNGG	3 cut(s)	364, 465, 571
StyI	CCWWGG	1 cut(s)	600
TasI	AATT	2 cut(s)	428, 546
TatI	WGTACW	1 cut(s)	332
TfiI	GAWTC	1 cut(s)	499
Tru1I	TTAA	2 cut(s)	291, 549
Tru9I	TTAA	2 cut(s)	291, 549
TscAI	CASTG	1 cut(s)	381
TseI	GCWGC	5 cut(s)	98, 257, 260, 269, 349
TspDTI	ATGAA	1 cut(s)	95
TspRI	CASTG	1 cut(s)	381
VpaK11BI	GGWCC	3 cut(s)	112, 311, 379
XapI	RAATTY	1 cut(s)	428
XmnI	GAANNNNTTC	1 cut(s)	234
XspI	CTAG	1 cut(s)	326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.