TIFY 3B-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G43440 AT3G43440 AT5G20900 |
| fragaria_vesca | FvH4_1g09690 |
| malus_domestica | MD02G1105900.v1.1 MD15G1225800.v1.1 |
| prunus_persica | Prupe.7G189200_v2.0.a1 |
| pyrus_communis | pycom02g08380 pycom15g20070 |
| rosa_chinensis | RchiOBHm_Chr2g0096551 |
| rosa_laevigata | RLG00000016648 |
| rosa_multiflora | Rmu_sc0004096.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00145540 |
| rosa_rugosa | Rorug02G0058400 Rorug02G0058400 |
| rosa_samantha | Rh2AG105600 Rh2BG108100 Rh2CG109900 Rh2DG108700 |
| rosa_wichuraiana | Rw2G008170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 482 |
| AccII | CGCG | 2 cut(s) | 225, 290 |
| AciI | CCGC | 5 cut(s) | 212, 242, 246, 288, 591 |
| AclWI | GGATC | 1 cut(s) | 334 |
| AcoI | YGGCCR | 1 cut(s) | 243 |
| AcsI | RAATTY | 1 cut(s) | 422 |
| AcuI | CTGAAG | 2 cut(s) | 434, 542 |
| AcyI | GRCGYC | 1 cut(s) | 201 |
| AfaI | GTAC | 2 cut(s) | 123, 322 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 94, 435, 572 |
| AgsI | TTSAA | 1 cut(s) | 583 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 297 |
| AhlI | ACTAGT | 1 cut(s) | 269 |
| AjnI | CCWGG | 3 cut(s) | 113, 358, 459 |
| AluBI | AGCT | 4 cut(s) | 43, 163, 297, 419 |
| AluI | AGCT | 4 cut(s) | 43, 163, 297, 419 |
| Alw26I | GTCTC | 1 cut(s) | 433 |
| AlwI | GGATC | 1 cut(s) | 334 |
| AoxI | GGCC | 1 cut(s) | 243 |
| ApeKI | GCWGC | 5 cut(s) | 40, 248, 251, 254, 337 |
| ApoI | RAATTY | 1 cut(s) | 422 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 219 |
| AspS9I | GGNCC | 1 cut(s) | 373 |
| AsuHPI | GGTGA | 2 cut(s) | 157, 357 |
| AvaII | GGWCC | 1 cut(s) | 373 |
| BbsI | GAAGAC | 1 cut(s) | 272 |
| BbvI | GCAGC | 5 cut(s) | 52, 235, 238, 241, 324 |
| BccI | CCATC | 4 cut(s) | 46, 133, 176, 475 |
| BciT130I | CCWGG | 3 cut(s) | 115, 360, 461 |
| BcoDI | GTCTC | 1 cut(s) | 433 |
| BcuI | ACTAGT | 1 cut(s) | 269 |
| BfaI | CTAG | 2 cut(s) | 270, 628 |
| BisI | GCNGC | 7 cut(s) | 41, 243, 246, 249, 252, 255, 338 |
| BlpI | GCTNAGC | 1 cut(s) | 159 |
| BlsI | GCNGC | 7 cut(s) | 42, 244, 247, 250, 253, 256, 339 |
| Bme1390I | CCNGG | 3 cut(s) | 115, 360, 461 |
| Bme18I | GGWCC | 1 cut(s) | 373 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 297 |
| BmgT120I | GGNCC | 1 cut(s) | 373 |
| BmrFI | CCNGG | 3 cut(s) | 115, 360, 461 |
| BmsI | GCATC | 1 cut(s) | 523 |
| BpiI | GAAGAC | 1 cut(s) | 272 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 430, 462 |
| BpmI | CTGGAG | 1 cut(s) | 482 |
| Bpu10I | CCTNAGC | 2 cut(s) | 387, 548 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 159 |
| BsaHI | GRCGYC | 1 cut(s) | 201 |
| BsaJI | CCNNGG | 1 cut(s) | 594 |
| BsaWI | WCCGGW | 1 cut(s) | 565 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 94, 435, 572 |
| Bse1I | ACTGG | 1 cut(s) | 368 |
| Bse3DI | GCAATG | 1 cut(s) | 429 |
| BseBI | CCWGG | 3 cut(s) | 115, 360, 461 |
| BseDI | CCNNGG | 1 cut(s) | 594 |
| BseGI | GGATG | 2 cut(s) | 103, 486 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 94, 435, 572 |
| BseMI | GCAATG | 1 cut(s) | 429 |
| BseMII | CTCAG | 3 cut(s) | 173, 378, 539 |
| BseNI | ACTGG | 1 cut(s) | 368 |
| BseX3I | CGGCCG | 1 cut(s) | 243 |
| BseXI | GCAGC | 5 cut(s) | 52, 235, 238, 241, 324 |
| BsgI | GTGCAG | 2 cut(s) | 59, 114 |
| Bsh1236I | CGCG | 2 cut(s) | 225, 290 |
| Bsh1285I | CGRYCG | 1 cut(s) | 246 |
| BshFI | GGCC | 1 cut(s) | 245 |
| BsiEI | CGRYCG | 1 cut(s) | 246 |
| BsiSI | CCGG | 2 cut(s) | 155, 566 |
| BslFI | GGGAC | 1 cut(s) | 488 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 94, 435, 572 |
| BsmAI | GTCTC | 1 cut(s) | 433 |
| BsmFI | GGGAC | 1 cut(s) | 488 |
| BsnI | GGCC | 1 cut(s) | 245 |
| Bsp143I | GATC | 2 cut(s) | 100, 326 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 159 |
| Bsp19I | CCATGG | 1 cut(s) | 594 |
| Bsp68I | TCGCGA | 1 cut(s) | 225 |
| BspACI | CCGC | 5 cut(s) | 212, 242, 246, 288, 591 |
| BspANI | GGCC | 1 cut(s) | 245 |
| BspCNI | CTCAG | 3 cut(s) | 172, 379, 540 |
| BspFNI | CGCG | 2 cut(s) | 225, 290 |
| BspPI | GGATC | 1 cut(s) | 334 |
| BsrDI | GCAATG | 1 cut(s) | 429 |
| BsrI | ACTGG | 1 cut(s) | 368 |
| BssECI | CCNNGG | 1 cut(s) | 594 |
| BssMI | GATC | 2 cut(s) | 100, 326 |
| BssNI | GRCGYC | 1 cut(s) | 201 |
| BssT1I | CCWWGG | 1 cut(s) | 594 |
| Bst2UI | CCWGG | 3 cut(s) | 115, 360, 461 |
| Bst4CI | ACNGT | 1 cut(s) | 494 |
| Bst6I | CTCTTC | 1 cut(s) | 453 |
| BstACI | GRCGYC | 1 cut(s) | 201 |
| BstC8I | GCNNGC | 2 cut(s) | 417, 513 |
| BstDEI | CTNAG | 3 cut(s) | 159, 387, 548 |
| BstDSI | CCRYGG | 1 cut(s) | 594 |
| BstF5I | GGATG | 2 cut(s) | 103, 486 |
| BstFNI | CGCG | 2 cut(s) | 225, 290 |
| BstKTI | GATC | 2 cut(s) | 103, 329 |
| BstMAI | GTCTC | 1 cut(s) | 433 |
| BstMBI | GATC | 2 cut(s) | 100, 326 |
| BstMCI | CGRYCG | 1 cut(s) | 246 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 209, 248, 251, 254 |
| BstNI | CCWGG | 3 cut(s) | 115, 360, 461 |
| BstSCI | CCNGG | 3 cut(s) | 113, 358, 459 |
| BstUI | CGCG | 2 cut(s) | 225, 290 |
| BstV1I | GCAGC | 5 cut(s) | 52, 235, 238, 241, 324 |
| BstV2I | GAAGAC | 1 cut(s) | 272 |
| BstZI | CGGCCG | 1 cut(s) | 243 |
| BsuRI | GGCC | 1 cut(s) | 245 |
| BtgI | CCRYGG | 1 cut(s) | 594 |
| BtgZI | GCGATG | 1 cut(s) | 42 |
| BtsCI | GGATG | 2 cut(s) | 103, 486 |
| BtsIMutI | CAGTG | 3 cut(s) | 311, 375, 518 |
| BtuMI | TCGCGA | 1 cut(s) | 225 |
| Cac8I | GCNNGC | 2 cut(s) | 417, 513 |
| CciNI | GCGGCCGC | 1 cut(s) | 243 |
| Cfr13I | GGNCC | 1 cut(s) | 373 |
| CseI | GACGC | 1 cut(s) | 209 |
| Csp6I | GTAC | 2 cut(s) | 122, 321 |
| CviAII | CATG | 1 cut(s) | 595 |
| CviJI | RGCY | 8 cut(s) | 43, 82, 158, 163, 245, 297, 379, 419 |
| CviKI_1 | RGCY | 8 cut(s) | 43, 82, 158, 163, 245, 297, 379, 419 |
| CviQI | GTAC | 2 cut(s) | 122, 321 |
| DdeI | CTNAG | 3 cut(s) | 159, 387, 548 |
| DpnI | GATC | 2 cut(s) | 102, 328 |
| DpnII | GATC | 2 cut(s) | 100, 326 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 482 |
| DriI | GACNNNNNGTC | 1 cut(s) | 297 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 482 |
| EaeI | YGGCCR | 1 cut(s) | 243 |
| EagI | CGGCCG | 1 cut(s) | 243 |
| Eam1104I | CTCTTC | 1 cut(s) | 453 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 297 |
| EarI | CTCTTC | 1 cut(s) | 453 |
| EciI | GGCGGA | 1 cut(s) | 580 |
| EclXI | CGGCCG | 1 cut(s) | 243 |
| Eco130I | CCWWGG | 1 cut(s) | 594 |
| Eco47I | GGWCC | 1 cut(s) | 373 |
| Eco52I | CGGCCG | 1 cut(s) | 243 |
| Eco57I | CTGAAG | 2 cut(s) | 434, 542 |
| EcoRII | CCWGG | 3 cut(s) | 113, 358, 459 |
| EcoT14I | CCWWGG | 1 cut(s) | 594 |
| ErhI | CCWWGG | 1 cut(s) | 594 |
| FaeI | CATG | 1 cut(s) | 598 |
| FaiI | YATR | 4 cut(s) | 233, 351, 499, 596 |
| FaqI | GGGAC | 1 cut(s) | 488 |
| FatI | CATG | 1 cut(s) | 594 |
| Fnu4HI | GCNGC | 7 cut(s) | 41, 243, 246, 249, 252, 255, 338 |
| FokI | GGATG | 2 cut(s) | 110, 493 |
| Fsp4HI | GCNGC | 7 cut(s) | 41, 243, 246, 249, 252, 255, 338 |
| FspBI | CTAG | 2 cut(s) | 270, 628 |
| GluI | GCNGC | 7 cut(s) | 41, 243, 246, 249, 252, 255, 338 |
| GsuI | CTGGAG | 1 cut(s) | 482 |
| HaeIII | GGCC | 1 cut(s) | 245 |
| HapII | CCGG | 2 cut(s) | 155, 566 |
| HgaI | GACGC | 1 cut(s) | 209 |
| Hin1I | GRCGYC | 1 cut(s) | 201 |
| Hin1II | CATG | 1 cut(s) | 598 |
| HinfI | GANTC | 1 cut(s) | 316 |
| HpaII | CCGG | 2 cut(s) | 155, 566 |
| HphI | GGTGA | 2 cut(s) | 157, 357 |
| Hpy166II | GTNNAC | 3 cut(s) | 311, 333, 365 |
| Hpy188I | TCNGA | 1 cut(s) | 49 |
| Hpy188III | TCNNGA | 2 cut(s) | 224, 602 |
| Hpy8I | GTNNAC | 3 cut(s) | 311, 333, 365 |
| Hpy99I | CGWCG | 2 cut(s) | 474, 533 |
| HpyAV | CCTTC | 3 cut(s) | 28, 517, 627 |
| HpyCH4III | ACNGT | 1 cut(s) | 494 |
| HpyCH4V | TGCA | 8 cut(s) | 40, 106, 131, 340, 408, 415, 434, 536 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 209, 248, 251, 254 |
| HpyF3I | CTNAG | 3 cut(s) | 159, 387, 548 |
| Hsp92I | GRCGYC | 1 cut(s) | 201 |
| Hsp92II | CATG | 1 cut(s) | 598 |
| Kzo9I | GATC | 2 cut(s) | 100, 326 |
| LmnI | GCTCC | 3 cut(s) | 157, 183, 361 |
| Lsp1109I | GCAGC | 5 cut(s) | 52, 235, 238, 241, 324 |
| LweI | GCATC | 1 cut(s) | 523 |
| MaeI | CTAG | 2 cut(s) | 270, 628 |
| MalI | GATC | 2 cut(s) | 102, 328 |
| MboI | GATC | 2 cut(s) | 100, 326 |
| MboII | GAAGA | 7 cut(s) | 68, 71, 163, 277, 292, 440, 617 |
| MluCI | AATT | 2 cut(s) | 410, 422 |
| MnlI | CCTC | 2 cut(s) | 88, 312 |
| MroXI | GAANNNNTTC | 1 cut(s) | 219 |
| MspA1I | CMGCKG | 1 cut(s) | 248 |
| MspI | CCGG | 2 cut(s) | 155, 566 |
| MspR9I | CCNGG | 3 cut(s) | 115, 360, 461 |
| MvaI | CCWGG | 3 cut(s) | 115, 360, 461 |
| MvnI | CGCG | 2 cut(s) | 225, 290 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 209, 248, 251, 254 |
| NcoI | CCATGG | 1 cut(s) | 594 |
| NdeII | GATC | 2 cut(s) | 100, 326 |
| NlaIII | CATG | 1 cut(s) | 598 |
| NotI | GCGGCCGC | 1 cut(s) | 243 |
| NruI | TCGCGA | 1 cut(s) | 225 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 183 |
| PdmI | GAANNNNTTC | 1 cut(s) | 219 |
| PfeI | GAWTC | 1 cut(s) | 316 |
| PfoI | TCCNGGA | 1 cut(s) | 459 |
| PkrI | GCNGC | 7 cut(s) | 42, 244, 247, 250, 253, 256, 339 |
| Psp6I | CCWGG | 3 cut(s) | 113, 358, 459 |
| PspGI | CCWGG | 3 cut(s) | 113, 358, 459 |
| PspPI | GGNCC | 1 cut(s) | 373 |
| RruI | TCGCGA | 1 cut(s) | 225 |
| RsaI | GTAC | 2 cut(s) | 123, 322 |
| RsaNI | GTAC | 2 cut(s) | 122, 321 |
| SatI | GCNGC | 7 cut(s) | 41, 243, 246, 249, 252, 255, 338 |
| Sau3AI | GATC | 2 cut(s) | 100, 326 |
| Sau96I | GGNCC | 1 cut(s) | 373 |
| ScrFI | CCNGG | 3 cut(s) | 115, 360, 461 |
| SetI | ASST | 9 cut(s) | 39, 45, 146, 165, 222, 299, 421, 549, 619 |
| SfaNI | GCATC | 1 cut(s) | 523 |
| SinI | GGWCC | 1 cut(s) | 373 |
| SpeI | ACTAGT | 1 cut(s) | 269 |
| Sse9I | AATT | 2 cut(s) | 410, 422 |
| SsiI | CCGC | 5 cut(s) | 212, 242, 246, 288, 591 |
| SspMI | CTAG | 2 cut(s) | 270, 628 |
| StyD4I | CCNGG | 3 cut(s) | 113, 358, 459 |
| StyI | CCWWGG | 1 cut(s) | 594 |
| TaaI | ACNGT | 1 cut(s) | 494 |
| TasI | AATT | 2 cut(s) | 410, 422 |
| TauI | GCSGC | 2 cut(s) | 245, 248 |
| TfiI | GAWTC | 1 cut(s) | 316 |
| TscAI | CASTG | 3 cut(s) | 318, 375, 525 |
| TseI | GCWGC | 5 cut(s) | 40, 248, 251, 254, 337 |
| TspGWI | ACGGA | 1 cut(s) | 107 |
| TspRI | CASTG | 3 cut(s) | 318, 375, 525 |
| VpaK11BI | GGWCC | 1 cut(s) | 373 |
| XapI | RAATTY | 1 cut(s) | 422 |
| XmnI | GAANNNNTTC | 1 cut(s) | 219 |
| XspI | CTAG | 2 cut(s) | 270, 628 |