Prupe.7G193800_v2.0.a1

RRP12-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
18420747 .. 18428590
7844 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G193800.1

Sequence Viewer

Length: 3792 bp
ATGGAAGGGATCGAAATGGACGACGGTTACACTCTTCCCCTAATCGAAGACGACGACATCTGCACCTCAATCCTCGCGCGCTTCAGCAACTCCACGCGCGAGGACCACCACCACCTCTGCGCAGCCATAGGCGCCATGGCTCAGGAGCTCAAAGACAAGAACCTCCCTTCGACCCCGGTCGCCTACTTGGGCTTCACGTGCTCTTCTCTCGACGGCCTCTCCTCCCAGCCCGAGCCTCCCGCTCATGTGATCGACGCCCTCCTCACAATTCTCTCCATTGTCTTTCAAAAAGTCTCGGCCGCAATTCTCGTGAAGAAGTCCGAGTTCCTATCGGAGCTCTTGGTGCGTGTTCTGCGGTCTCCGTCTTTGACAGTGGGCGCCGCCGTCTCAGGATTGAAATGCATATCGCATGTGCTCATCATCAGAGGCCGTGTCAACTGGTCTGATGTGTCTTCATTGTATGGCTTCTTATTGAGCTTTATTACAGATTCCCGCCCTAAGGTGAGAAGACAATCACAATTGTGTCTTCGTGATGTACTGCAAAGTCTTCAAGGAACACCGCTGCTTGCCCCTGCAAGTGAAGGGCTTACTAACTTATTTGAAAGGTTTCTTCTGCTTGCTGGTGGGTCAAATGCAGATGCGGGTGAAGGACCCAAGGGAGCTCAGGAGGTCTTGTATATTTTGGATGCTTTGAAAGAGTGTCTTTTTCTTATGTCAATCAAGTACAAAACTTCCGTCCTCAAGTACTACAAAACTCTCTTGGATCTGCACCAACCACTTGTTACAAAGCGCATAACAGATAGTTTGAATATACTTTGTCTCAATCCATCTACAGACGTTCCTCCTGAAGTGTTGCTCGATCTGTTATGCTCATTAGCTCTTTCTGTCTCCACAAATGAGACATCTGTCGATGGGATGATGTTCACAGCTCGCTTGCTCGGTAGTGGAATGGCCAAAGTTTATTCCCTCAATAGGCATATATGCGTAGTTAAACTCCCTATTGTATTCAATGCACTCAGAGATGTATTGGCATCTGAGCATGAAGAGGCTATACATGCAGCAGCGCATACATTTAAGAGTCTCATTCATGATTGCATTGATGAAAGCTTGATCAAACAGGGAGTTGACCAGATTGTAATGAATGCAAATCTGGATGCAAGGAAGTCTGGGCCAACTATAATTGAAAAAGTATGTGCTACTATTGAAAGCTTACTTGGTTATCACTACGCTGGTGTCTGGGACCTTGCATTCCAAGTTGTTTCAGCCATGTTCGATAAATTAGGGGTATATGCTTCTTATTTCATGAGGGGTGCGCTCAGGAGCTTGGCAGAGATGGAGAAGTTATCCGATGAAGATTTCCCTTTCAGGAAACAGCTGCATGAATGCCTTGGATCGGCTCTTGTTGCAATGGGACCTGAAACATTTTTAGGTCTTCTACCTCTTAATTTGGAGGCTGAAGACTCAAGTCAGGTGAATGTTTGGCTCTTTCCGATACTGAAGCAGTATACTATTGGTGCACGTTTGAGCTTCTTTACAGAGTCAATTTTGGGTATGGTTCGAACGATAAAGGAGAAATCTAGAAAGCTCGAGTCACAAGGACGTATTTTTTCATCAAGGAGTACAGATGCATTTGTACATGCTTTGTGGTCACTGTTACCTTCATTTTGCAACTACGCTTCAGATACTGCTGAAAGTTTCAACGATCTAGAGCAAGCCTTGTGCAGTGCCCTTCAAGATGAACCTGAGTTTCGTGGAATAATATGCTTGAGCTTGCAGATTCTTGTACAACAAAATAAGAAAATTGTGGAAGAAATGAATGATCTGTCTGATAGTGAAGTAGGTAGTGCGAGATACAGAGCTATTGCTCATTATACCCCTCAGGTTACAGCAGATAACTTAAGCGTGCTCAAGTCATCTGCTTGCGAGTTACTGCATGTTCTATCAGGTGTTTTCTTGAATACCACAAAAGATGATGCAGGCTGTTTGCAGTCCACAATTGGTGAGTTTGCTTCCATAGCAGATAAAGAAGCTGTGTCAAAGTTTTTCCGAAATAGAATGGGGATGCTTTTAAAGGTTACTGAAGAGGCTAGCAAAGCAGAAAGTCCTAGAGATTTTAATTCCAAGCGGGCCCAACTGTTTGACTTGGCGGTTTCATTTTTACCTGGTTTACATGATAATGAGGTTAATGTTCTATTTACTGCAATAAAGAATGCATTACAGGATGATGAAGGTTTGATACAAAAGAAGGCATATAAAGTCCTTTCAATCATTCTCAGGGACTGTGATTCGTTTCTTTCATCGAATTCATCGAAGCTCAAGGAATTGCTTGACCTTATGGTTAATGTACTGCCTTCATGCCATTTTTCAGCTAAACGGCACAGACTCGACTGCTTGTACTTCCTAGTAGTCCATGTTTCAAAGAGTGACACAGAGCAGTGGCGGGATGACATCATAAGTTTCCTGACAGAAATAGTTCTTGCACTTAAAGAGGCTAACAAAAAGACAAGAAATAGAGCTTATGATATCCTTGTCCAAATTGGCCACGCCTGTGGTGATGAGGAGAAAGGCGGGAATAGAGAACACCTGTTGGAATTTTTTAACATGGTAGCTGGGGGCCTAGCTGGTGAAACTCCTCATATGATCAGTGCTGCAATGAAGGGCTTAGCTCGGTTGGCTTATGAGTTTTCTGATCTTGTTTCAACCGCTACCAATTTGCTTCCGTCCGCATTTCTCCTCCTCCAGAGAAAGAACAAAGAAATAATTAAAGCTAATTTAGGTTTGTTGAAGGTATTAGTGGCCAAATCACAAGCCGAGGGGTTGCAATTGCACTTGAAAAGCATGGTGGAAGGCTTGCTGAAGTGGCAAGACGCTACTAAAACCCACTTCAAAGCCAAGGTTAAGCTTCTTCTAGAAATGCTTGTCAAGAAATGTGGGCTCGATGCTGTTAAGGCTGTGATGCCTCAAGAACATATGAAATTACTTACCAACATACGGAAGATCAAGGAACGGAAAGACAGGAAACTGGGTTCTAAATCTGAGGAAGCTAGATCTCAAGTTTCCAAAGCAACTACATCCAGGTTAAGCAGATGGAACCATACAAAAATATTTTCTGATTTTGATGATGATGAAACTGAGGATAGTGATACAGAAAATATGGATGCCAAAACAGTCTTGGGCAAACGTGGCAAGGCTTTCTCGCAGCTCAAATCCAAAGCATCTTCATTACGAAGAACAAAGAAGAACTTGCTCGATCAACTAGAAGATGAGCCACTCGACTTGCTTGATCGGCAAAGAACAAGGTCAGCACTTAGATCATCCGAGAATTTAAAGCGAAAAATGGAGTCGGATGATGGGCCAGAGATAGACGATGATGGGCGCCTAATAATTCGTGACGAAGCAGAATCGTACAAGAGAAAGCCATCGGAACCTCATTCGGATGCAAGAAGTGAAGCGGGTAGTTACTTGTCCGTAGACTCAAAGAAAACACAGAAGCGGCGGAAGACATCAGAGTCCGGGTGGGCTGCCACCGGCAAAGAGTACGCCAGCAAGAAGGCCGGTGGGGATTTGAAGAGGAAGGACAAACTTGAACCGTATGCGTATTGGCCACTTGATCGAAAAATGATGAGCCGTAGGCCGGAGCATAGGGCAGCTGCAAGAAAAGGGATATCAAGTGTGGTGAAGATGACAAAGAAGCTGGAAGGGAAGAGTGTCTCAACTATTCTCTCCACTAAAGGCTTAAAGTTTAAGAATAAAAGTAAGGTTCAGAAGGGAGGCAGCAAGAAGAAAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1264

Amino Acids

140.48

Weight (kDa)

8.67

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3508
Acc16I TGCGCA 1 cut(s) 121
AccB1I GGYRCC 3 cut(s) 131, 377, 3375
AccBSI CCGCTC 1 cut(s) 242
AccI GTMKAC 2 cut(s) 1505, 3471
AccII CGCG 4 cut(s) 77, 79, 97, 99
AclWI GGATC 3 cut(s) 17, 771, 1399
AcoI YGGCCR 5 cut(s) 297, 951, 2539, 2796, 3602
AcsI RAATTY 3 cut(s) 2302, 2591, 3322
AcuI CTGAAG 7 cut(s) 67, 867, 1476, 1517, 1662, 2100, 2876
AcvI CACGTG 1 cut(s) 198
AcyI GRCGYC 4 cut(s) 132, 255, 378, 3376
AfiI CCNNNNNNNGG 5 cut(s) 499, 972, 1393, 2991, 3634
AflII CTTAAG 1 cut(s) 1897
AjnI CCWGG 2 cut(s) 2161, 3074
AjuI GAANNNNNNNTTGG 2 cut(s) 1197, 1229
AleI CACNNNNGTG 2 cut(s) 520, 2547
AloI GAACNNNNNNTCC 2 cut(s) 3010, 3042
Alw21I GWGCWC 7 cut(s) 150, 203, 339, 417, 664, 1519, 1908
Alw26I GTCTC 8 cut(s) 298, 363, 391, 824, 892, 893, 1085, 3715
Alw44I GTGCAC 1 cut(s) 1515
AlwI GGATC 3 cut(s) 17, 771, 1399
AlwNI CAGNNNCTG 2 cut(s) 1685, 2280
Ama87I CYCGRG 2 cut(s) 230, 1586
ApaI GGGCCC 1 cut(s) 2131
ApaLI GTGCAC 1 cut(s) 1515
ApoI RAATTY 3 cut(s) 2302, 2591, 3322
ArsI GACNNNNNNTTYG 2 cut(s) 720, 752
Asp700I GAANNNNTTC 2 cut(s) 606, 2472
AspS9I GGNCC 9 cut(s) 103, 650, 1169, 1240, 1412, 2127, 2128, 2614, 3353
AsuC2I CCSGG 2 cut(s) 176, 3514
AsuHPI GGTGA 7 cut(s) 514, 656, 1483, 2012, 2564, 2636, 3688
AsuII TTCGAA 1 cut(s) 1558
AsuNHI GCTAGC 1 cut(s) 2087
AvaI CYCGRG 2 cut(s) 230, 1586
AvaII GGWCC 4 cut(s) 103, 650, 1240, 1412
AxyI CCTNAGG 2 cut(s) 498, 1878
BaeGI GKGCMC 3 cut(s) 1519, 1729, 2131
BalI TGGCCA 4 cut(s) 953, 2541, 2798, 3604
BanI GGYRCC 3 cut(s) 131, 377, 3375
BanII GRGCYC 5 cut(s) 150, 339, 664, 2131, 2937
BarI GAAGNNNNNNTAC 4 cut(s) 1035, 1067, 2220, 2252
BauI CACGAG 1 cut(s) 308
BbrPI CACGTG 1 cut(s) 198
BbsI GAAGAC 8 cut(s) 54, 444, 514, 518, 539, 1424, 1464, 3506
Bbv12I GWGCWC 7 cut(s) 150, 203, 339, 417, 664, 1519, 1908
BccI CCATC 7 cut(s) 835, 905, 1327, 3081, 3344, 3365, 3427
BceAI ACGGC 5 cut(s) 229, 368, 414, 2390, 3612
BciT130I CCWGG 2 cut(s) 2163, 3076
BclI TGATCA 2 cut(s) 1110, 2640
BcnI CCSGG 2 cut(s) 176, 3514
BcoDI GTCTC 8 cut(s) 298, 363, 391, 824, 892, 893, 1085, 3715
BfaI CTAG 9 cut(s) 1578, 1706, 2088, 2106, 2402, 2618, 2909, 3045, 3257
BfmI CTRYAG 1 cut(s) 831
BfoI RGCGCY 3 cut(s) 135, 381, 3379
BfrI CTTAAG 1 cut(s) 1897
BglII AGATCT 1 cut(s) 3047
BlpI GCTNAGC 1 cut(s) 2662
BmcAI AGTACT 1 cut(s) 746
Bme1390I CCNGG 4 cut(s) 176, 2163, 3076, 3514
Bme18I GGWCC 4 cut(s) 103, 650, 1240, 1412
BmeT110I CYCGRG 2 cut(s) 230, 1586
BmgT120I GGNCC 9 cut(s) 103, 650, 1169, 1240, 1412, 2127, 2128, 2614, 3353
BmrFI CCNGG 4 cut(s) 176, 2163, 3076, 3514
BmrI ACTGGG 1 cut(s) 3032
BmtI GCTAGC 1 cut(s) 2091
BmuI ACTGGG 1 cut(s) 3032
BoxI GACNNNNGTC 3 cut(s) 176, 905, 1464
BpiI GAAGAC 8 cut(s) 54, 444, 514, 518, 539, 1424, 1464, 3506
BpmI CTGGAG 1 cut(s) 2723
Bpu10I CCTNAGC 3 cut(s) 141, 663, 1316
Bpu1102I GCTNAGC 1 cut(s) 2662
Bpu14I TTCGAA 1 cut(s) 1558
BpuEI CTTGAG 7 cut(s) 725, 1447, 1786, 1892, 2300, 2946, 3036
BpuMI CCSGG 2 cut(s) 176, 3514
BsaAI YACGTR 1 cut(s) 198
BsaHI GRCGYC 4 cut(s) 132, 255, 378, 3376
BsaI GGTCTC 1 cut(s) 363
BsaJI CCNNGG 6 cut(s) 135, 174, 654, 1387, 2811, 2892
BsaXI ACNNNNNCTCC 4 cut(s) 203, 233, 659, 689
Bsc4I CCNNNNNNNGG 5 cut(s) 499, 972, 1393, 2991, 3634
Bse118I RCCGGY 2 cut(s) 3527, 3554
Bse1I ACTGG 2 cut(s) 443, 3027
Bse21I CCTNAGG 2 cut(s) 498, 1878
Bse3DI GCAATG 2 cut(s) 1413, 2658
BseBI CCWGG 2 cut(s) 2163, 3076
BseDI CCNNGG 6 cut(s) 135, 174, 654, 1387, 2811, 2892
BseLI CCNNNNNNNGG 5 cut(s) 499, 972, 1393, 2991, 3634
BseMI GCAATG 2 cut(s) 1413, 2658
BseNI ACTGG 2 cut(s) 443, 3027
BsePI GCGCGC 1 cut(s) 77
BseRI GAGGAG 6 cut(s) 211, 251, 2573, 2622, 2723, 2726
BseSI GKGCMC 3 cut(s) 1519, 1729, 2131
BseX3I CGGCCG 1 cut(s) 297
BseYI CCCAGC 2 cut(s) 225, 2609
BsgI GTGCAG 3 cut(s) 46, 752, 1741
Bsh1236I CGCG 4 cut(s) 77, 79, 97, 99
Bsh1285I CGRYCG 2 cut(s) 180, 300
BshNI GGYRCC 3 cut(s) 131, 377, 3375
BsiEI CGRYCG 2 cut(s) 180, 300
BsiHKAI GWGCWC 7 cut(s) 150, 203, 339, 417, 664, 1519, 1908
BsiHKCI CYCGRG 2 cut(s) 230, 1586
BsiSI CCGG 5 cut(s) 176, 3513, 3528, 3555, 3635
BslFI GGGAC 3 cut(s) 1253, 1425, 2291
BslI CCNNNNNNNGG 5 cut(s) 499, 972, 1393, 2991, 3634
BsmAI GTCTC 8 cut(s) 298, 363, 391, 824, 892, 893, 1085, 3715
BsmBI CGTCTC 1 cut(s) 391
BsmFI GGGAC 3 cut(s) 1253, 1425, 2291
BsmI GAATGC 4 cut(s) 1147, 1247, 1388, 2215
Bso31I GGTCTC 1 cut(s) 363
BsoBI CYCGRG 2 cut(s) 230, 1586
Bsp119I TTCGAA 1 cut(s) 1558
Bsp120I GGGCCC 1 cut(s) 2127
Bsp1407I TGTACA 2 cut(s) 1633, 1783
Bsp1720I GCTNAGC 1 cut(s) 2662
Bsp19I CCATGG 1 cut(s) 135
BspFNI CGCG 4 cut(s) 77, 79, 97, 99
BspHI TCATGA 2 cut(s) 1087, 1302
BspOI GCTAGC 1 cut(s) 2091
BspPI GGATC 3 cut(s) 17, 771, 1399
BspQI GCTCTTC 1 cut(s) 208
BspT104I TTCGAA 1 cut(s) 1558
BspT107I GGYRCC 3 cut(s) 131, 377, 3375
BspTI CTTAAG 1 cut(s) 1897
BspTNI GGTCTC 1 cut(s) 363
BsrBI CCGCTC 1 cut(s) 242
BsrDI GCAATG 2 cut(s) 1413, 2658
BsrFI RCCGGY 2 cut(s) 3527, 3554
BsrGI TGTACA 2 cut(s) 1633, 1783
BsrI ACTGG 2 cut(s) 443, 3027
BssAI RCCGGY 2 cut(s) 3527, 3554
BssECI CCNNGG 6 cut(s) 135, 174, 654, 1387, 2811, 2892
BssHII GCGCGC 1 cut(s) 77
BssNAI GTATAC 1 cut(s) 1506
BssNI GRCGYC 4 cut(s) 132, 255, 378, 3376
BssSI CACGAG 1 cut(s) 308
BssT1I CCWWGG 4 cut(s) 135, 654, 1387, 2892
Bst1107I GTATAC 1 cut(s) 1506
Bst2BI CACGAG 1 cut(s) 308
Bst2UI CCWGG 2 cut(s) 2163, 3076
Bst4CI ACNGT 7 cut(s) 26, 373, 1653, 2136, 2282, 3169, 3591
Bst6I CTCTTC 6 cut(s) 39, 208, 1038, 2076, 3563, 3698
BstACI GRCGYC 4 cut(s) 132, 255, 378, 3376
BstAFI CTTAAG 1 cut(s) 1897
BstAUI TGTACA 2 cut(s) 1633, 1783
BstBAI YACGTR 1 cut(s) 198
BstBI TTCGAA 1 cut(s) 1558
BstDSI CCRYGG 1 cut(s) 135
BstFNI CGCG 4 cut(s) 77, 79, 97, 99
BstH2I RGCGCY 3 cut(s) 135, 381, 3379
BstMAI GTCTC 8 cut(s) 298, 363, 391, 824, 892, 893, 1085, 3715
BstMCI CGRYCG 2 cut(s) 180, 300
BstNI CCWGG 2 cut(s) 2163, 3076
BstNSI RCATGY 4 cut(s) 413, 1058, 1640, 1937
BstPAI GACNNNNGTC 3 cut(s) 176, 905, 1464
BstSCI CCNGG 4 cut(s) 174, 2161, 3074, 3512
BstSFI CTRYAG 1 cut(s) 831
BstSLI GKGCMC 3 cut(s) 1519, 1729, 2131
BstUI CGCG 4 cut(s) 77, 79, 97, 99
BstV2I GAAGAC 8 cut(s) 54, 444, 514, 518, 539, 1424, 1464, 3506
BstX2I RGATCY 2 cut(s) 763, 3047
BstXI CCANNNNNNTGG 1 cut(s) 2549
BstYI RGATCY 2 cut(s) 763, 3047
BstZ17I GTATAC 1 cut(s) 1506
BstZI CGGCCG 1 cut(s) 297
Bsu36I CCTNAGG 2 cut(s) 498, 1878
BtgI CCRYGG 1 cut(s) 135
BtsI GCAGTG 2 cut(s) 1729, 2441
BtsIMutI CAGTG 5 cut(s) 378, 1649, 1729, 2441, 2650
CaiI CAGNNNCTG 2 cut(s) 1685, 2280
CciI TCATGA 2 cut(s) 1087, 1302
Cfr10I RCCGGY 2 cut(s) 3527, 3554
Cfr13I GGNCC 9 cut(s) 103, 650, 1169, 1240, 1412, 2127, 2128, 2614, 3353
CseI GACGC 2 cut(s) 263, 2876
CsiI ACCWGGT 1 cut(s) 2161
CspCI CAANNNNNGTGG 4 cut(s) 2911, 2946, 3258, 3293
DinI GGCGCC 3 cut(s) 133, 379, 3377
DraI TTTAAA 2 cut(s) 2070, 3327
DrdI GACNNNNNNGTC 1 cut(s) 3508
DseDI GACNNNNNNGTC 1 cut(s) 3508
EaeI YGGCCR 5 cut(s) 297, 951, 2539, 2796, 3602
EagI CGGCCG 1 cut(s) 297
Eam1104I CTCTTC 6 cut(s) 39, 208, 1038, 2076, 3563, 3698
EarI CTCTTC 6 cut(s) 39, 208, 1038, 2076, 3563, 3698
EciI GGCGGA 1 cut(s) 3511
Ecl136II GAGCTC 3 cut(s) 148, 337, 662
EclXI CGGCCG 1 cut(s) 297
Eco130I CCWWGG 4 cut(s) 135, 654, 1387, 2892
Eco24I GRGCYC 5 cut(s) 150, 339, 664, 2131, 2937
Eco31I GGTCTC 1 cut(s) 363
Eco32I GATATC 2 cut(s) 2524, 3666
Eco47I GGWCC 4 cut(s) 103, 650, 1240, 1412
Eco52I CGGCCG 1 cut(s) 297
Eco53kI GAGCTC 3 cut(s) 148, 337, 662
Eco57I CTGAAG 7 cut(s) 67, 867, 1476, 1517, 1662, 2100, 2876
Eco72I CACGTG 1 cut(s) 198
Eco81I CCTNAGG 2 cut(s) 498, 1878
Eco88I CYCGRG 2 cut(s) 230, 1586
EcoICRI GAGCTC 3 cut(s) 148, 337, 662
EcoO109I RGGNCCY 4 cut(s) 650, 1240, 1412, 2614
EcoRI GAATTC 1 cut(s) 2302
EcoRII CCWGG 2 cut(s) 2161, 3074
EcoRV GATATC 2 cut(s) 2524, 3666
EcoT14I CCWWGG 4 cut(s) 135, 654, 1387, 2892
EcoT22I ATGCAT 3 cut(s) 404, 1630, 2215
EcoT38I GRGCYC 5 cut(s) 150, 339, 664, 2131, 2937
EgeI GGCGCC 3 cut(s) 133, 379, 3377
EheI GGCGCC 3 cut(s) 133, 379, 3377
ErhI CCWWGG 4 cut(s) 135, 654, 1387, 2892
Esp3I CGTCTC 1 cut(s) 391
FalI AAGNNNNNCTT 4 cut(s) 687, 719, 3227, 3259
FaqI GGGAC 3 cut(s) 1253, 1425, 2291
FauI CCCGC 7 cut(s) 247, 500, 634, 2118, 2433, 2561, 3445
FauNDI CATATG 2 cut(s) 2637, 2970
FbaI TGATCA 2 cut(s) 1110, 2640
FblI GTMKAC 2 cut(s) 1505, 3471
FriOI GRGCYC 5 cut(s) 150, 339, 664, 2131, 2937
FspBI CTAG 9 cut(s) 1578, 1706, 2088, 2106, 2402, 2618, 2909, 3045, 3257
FspI TGCGCA 1 cut(s) 121
GsaI CCCAGC 2 cut(s) 229, 2613
GsuI CTGGAG 1 cut(s) 2723
HaeII RGCGCY 3 cut(s) 135, 381, 3379
HapII CCGG 5 cut(s) 176, 3513, 3528, 3555, 3635
HgaI GACGC 2 cut(s) 263, 2876
Hin1I GRCGYC 4 cut(s) 132, 255, 378, 3376
HincII GTYRAC 2 cut(s) 436, 1126
HindII GTYRAC 2 cut(s) 436, 1126
HindIII AAGCTT 3 cut(s) 1105, 1207, 2900
HpaII CCGG 5 cut(s) 176, 3513, 3528, 3555, 3635
HphI GGTGA 7 cut(s) 514, 656, 1483, 2012, 2564, 2636, 3688
Hpy166II GTNNAC 8 cut(s) 436, 924, 1126, 1506, 1517, 1992, 2168, 3472
Hpy8I GTNNAC 8 cut(s) 436, 924, 1126, 1506, 1517, 1992, 2168, 3472
Hpy99I CGWCG 4 cut(s) 26, 56, 215, 257
HpyCH4III ACNGT 7 cut(s) 26, 373, 1653, 2136, 2282, 3169, 3591
HpyCH4IV ACGT 5 cut(s) 197, 837, 1519, 1600, 3181
HpySE526I ACGT 5 cut(s) 197, 837, 1519, 1600, 3181
Hsp92I GRCGYC 4 cut(s) 132, 255, 378, 3376
KasI GGCGCC 3 cut(s) 131, 377, 3375
Ksp22I TGATCA 2 cut(s) 1110, 2640
LguI GCTCTTC 1 cut(s) 208
LmnI GCTCC 5 cut(s) 145, 334, 659, 1320, 3637
MabI ACCWGGT 1 cut(s) 2161
MaeI CTAG 9 cut(s) 1578, 1706, 2088, 2106, 2402, 2618, 2909, 3045, 3257
MaeII ACGT 5 cut(s) 197, 837, 1519, 1600, 3181
MbiI CCGCTC 1 cut(s) 242
MfeI CAATTG 3 cut(s) 518, 1995, 2822
MflI RGATCY 2 cut(s) 763, 3047
MlsI TGGCCA 4 cut(s) 953, 2541, 2798, 3604
MluNI TGGCCA 4 cut(s) 953, 2541, 2798, 3604
Mly113I GGCGCC 3 cut(s) 132, 378, 3376
MlyI GAGTC 8 cut(s) 1087, 1454, 1547, 1598, 2376, 3350, 3467, 3518
MmeI TCCRAC 2 cut(s) 2568, 3324
Mox20I TGGCCA 4 cut(s) 953, 2541, 2798, 3604
Mph1103I ATGCAT 3 cut(s) 404, 1630, 2215
MroXI GAANNNNTTC 2 cut(s) 606, 2472
MscI TGGCCA 4 cut(s) 953, 2541, 2798, 3604
MslI CAYNNNNRTG 4 cut(s) 520, 2175, 2547, 3435
Msp20I TGGCCA 4 cut(s) 953, 2541, 2798, 3604
MspA1I CMGCKG 3 cut(s) 562, 1375, 3650
MspCI CTTAAG 1 cut(s) 1897
MspI CCGG 5 cut(s) 176, 3513, 3528, 3555, 3635
MspR9I CCNGG 4 cut(s) 176, 2163, 3076, 3514
MunI CAATTG 3 cut(s) 518, 1995, 2822
Mva1269I GAATGC 4 cut(s) 1147, 1247, 1388, 2215
MvaI CCWGG 2 cut(s) 2163, 3076
MvnI CGCG 4 cut(s) 77, 79, 97, 99
NarI GGCGCC 3 cut(s) 132, 378, 3376
NciI CCSGG 2 cut(s) 176, 3514
NcoI CCATGG 1 cut(s) 135
NdeI CATATG 2 cut(s) 2637, 2970
NheI GCTAGC 1 cut(s) 2087
NmeAIII GCCGAG 2 cut(s) 275, 2836
NmuCI GTSAC 4 cut(s) 1590, 1647, 2423, 3389
NsbI TGCGCA 1 cut(s) 121
NsiI ATGCAT 3 cut(s) 404, 1630, 2215
NspI RCATGY 4 cut(s) 413, 1058, 1640, 1937
NspV TTCGAA 1 cut(s) 1558
OliI CACNNNNGTG 2 cut(s) 520, 2547
PaeR7I CTCGAG 1 cut(s) 1586
PagI TCATGA 2 cut(s) 1087, 1302
PauI GCGCGC 1 cut(s) 77
PciSI GCTCTTC 1 cut(s) 208
PcsI WCGNNNNNNNCGW 3 cut(s) 18, 51, 2306
PctI GAATGC 4 cut(s) 1147, 1247, 1388, 2215
PdmI GAANNNNTTC 2 cut(s) 606, 2472
PfeI GAWTC 4 cut(s) 488, 1777, 2285, 3401
PleI GAGTC 8 cut(s) 1086, 1454, 1546, 1597, 2376, 3349, 3467, 3517
PluTI GGCGCC 3 cut(s) 135, 381, 3379
PmaCI CACGTG 1 cut(s) 198
PmlI CACGTG 1 cut(s) 198
PpsI GAGTC 8 cut(s) 1086, 1454, 1546, 1597, 2376, 3349, 3467, 3517
Ppu21I YACGTR 1 cut(s) 198
PpuMI RGGWCCY 3 cut(s) 650, 1240, 1412
PshAI GACNNNNGTC 3 cut(s) 176, 905, 1464
Psp124BI GAGCTC 3 cut(s) 150, 339, 664
Psp5II RGGWCCY 3 cut(s) 650, 1240, 1412
Psp6I CCWGG 2 cut(s) 2161, 3074
PspCI CACGTG 1 cut(s) 198
PspFI CCCAGC 2 cut(s) 225, 2609
PspGI CCWGG 2 cut(s) 2161, 3074
PspOMI GGGCCC 1 cut(s) 2127
PspPI GGNCC 9 cut(s) 103, 650, 1169, 1240, 1412, 2127, 2128, 2614, 3353
PspPPI RGGWCCY 3 cut(s) 650, 1240, 1412
PspXI VCTCGAGB 1 cut(s) 1586
PstNI CAGNNNCTG 2 cut(s) 1685, 2280
PsuI RGATCY 2 cut(s) 763, 3047
PteI GCGCGC 1 cut(s) 77
PvuII CAGCTG 2 cut(s) 1375, 3650
RseI CAYNNNNRTG 4 cut(s) 520, 2175, 2547, 3435
SacI GAGCTC 3 cut(s) 150, 339, 664
SapI GCTCTTC 1 cut(s) 208
Sau96I GGNCC 9 cut(s) 103, 650, 1169, 1240, 1412, 2127, 2128, 2614, 3353
ScaI AGTACT 1 cut(s) 746
SchI GAGTC 8 cut(s) 1087, 1454, 1547, 1598, 2376, 3350, 3467, 3518
ScrFI CCNGG 4 cut(s) 176, 2163, 3076, 3514
SexAI ACCWGGT 1 cut(s) 2161
SfcI CTRYAG 1 cut(s) 831
SfoI GGCGCC 3 cut(s) 133, 379, 3377
Sfr274I CTCGAG 1 cut(s) 1586
SfuI TTCGAA 1 cut(s) 1558
SinI GGWCC 4 cut(s) 103, 650, 1240, 1412
SlaI CTCGAG 1 cut(s) 1586
SmiMI CAYNNNNRTG 4 cut(s) 520, 2175, 2547, 3435
SmlI CTYRAG 9 cut(s) 740, 1462, 1586, 1765, 1897, 1907, 2315, 2961, 3051
SmoI CTYRAG 9 cut(s) 740, 1462, 1586, 1765, 1897, 1907, 2315, 2961, 3051
SspDI GGCGCC 3 cut(s) 131, 377, 3375
SspI AATATT 1 cut(s) 3105
SspMI CTAG 9 cut(s) 1578, 1706, 2088, 2106, 2402, 2618, 2909, 3045, 3257
SstI GAGCTC 3 cut(s) 150, 339, 664
StyD4I CCNGG 4 cut(s) 174, 2161, 3074, 3512
StyI CCWWGG 4 cut(s) 135, 654, 1387, 2892
TaaI ACNGT 7 cut(s) 26, 373, 1653, 2136, 2282, 3169, 3591
TaiI ACGT 5 cut(s) 200, 840, 1522, 1603, 3184
TatI WGTACW 8 cut(s) 535, 723, 744, 1619, 1633, 1783, 2344, 2394
TauI GCSGC 3 cut(s) 302, 383, 3496
TfiI GAWTC 4 cut(s) 488, 1777, 2285, 3401
TscAI CASTG 5 cut(s) 378, 1656, 1729, 2441, 2650
TseFI GTSAC 4 cut(s) 1590, 1647, 2423, 3389
Tsp45I GTSAC 4 cut(s) 1590, 1647, 2423, 3389
TspGWI ACGGA 6 cut(s) 351, 724, 2709, 3007, 3022, 3457
TspRI CASTG 5 cut(s) 378, 1656, 1729, 2441, 2650
Vha464I CTTAAG 1 cut(s) 1897
VneI GTGCAC 1 cut(s) 1515
VpaK11BI GGWCC 4 cut(s) 103, 650, 1240, 1412
XapI RAATTY 3 cut(s) 2302, 2591, 3322
XbaI TCTAGA 3 cut(s) 1577, 1705, 2908
XceI RCATGY 4 cut(s) 413, 1058, 1640, 1937
XcmI CCANNNNNNNNNTGG 2 cut(s) 133, 3169
XhoI CTCGAG 1 cut(s) 1586
XmiI GTMKAC 2 cut(s) 1505, 3471
XmnI GAANNNNTTC 2 cut(s) 606, 2472
XspI CTAG 9 cut(s) 1578, 1706, 2088, 2106, 2402, 2618, 2909, 3045, 3257
ZrmI AGTACT 1 cut(s) 746
Zsp2I ATGCAT 3 cut(s) 404, 1630, 2215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.