Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0006794

Physical Location & Seq

Genomic Coordinates Reverse (-)

7982102 .. 7985864

Gene Structure 3763 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016588

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGGAAGCCATTGAAATGGAAGAGCCGCCGCTAACCCCCACCAGCACCACCGCCTTCGATGACGACGCCGACGCCGACATCTGCACCTCAATCCTCACGTGCTTCGGCAACTCCACGCGCGAGGACCACCAGCACCTCTGCGCCGTCATCGGCGGCATGGCCCAGGGTTTCAAAGACCAAAACCTCCCTCCGTCTCCGGTAGCCTACTTCGGCGCCGCGTGCTCGTCTCTTGATCGAATCTTATCGGAGCCGGAGCCCTCCGGTCACATGATCGACGCGCTCCTCACAATTCTCTCCATGGCCGTCCGGAAAGTCTCGCCAGCGATTCTCGTGAAGAAGAGCAACCTCGTTAACGGACTCCTGGTTCGTGCTCTCCTGTCCAGCTCTTTGACCATCGCCGGAGCCGTCTCCGGGTTGAAATGTATAGCGCATTTGCTCATCGTCGGCAGCCGGGTCAACCACAACAACTGGTCAGACATTTCTCAGCTCTATGGCTTCTTACTGAGCTTCGCTACCGATTCCCGCCCTAAGGTGAAAAGGCAATCACATTTGCGGTTACGCGATGTACTGCAAAGTTTCCAAGGGACTTCGCTGCACTCACCGGCAAGTCAAGGCATTACTGATTTATTCAAAAGGTTTATTCTGCTTGCTGGTGGAACAAAACCAGCTGCTAGTGAAGGGCCGAAGGGGAGTCTCGAGGTTTTATATCTTTTGGATGCTTTTAAAGAATGTCTTGCTCTTATGTCGACCAAGAATAAAAACGAGATCCTCGAGCTCTTTAAACCTCTCTTGGGACTGCAAAACCCTGTTGTTACAAGGCGCATAACGGATGGTTTGTATAGGCTTTGTCTCGAACCATGTCCAGACGTTTCTCCTCAGATATTGCTTGATCAACTATGCTTATTATCTCTTTCTGTCTCCAACAATAAGACATCTGTGGATGACATGACATTTACGGCTCGTTTGCTCAATAATGGAATGGCAAAGGTTTATTCACTCAATAGGCAATTGTGTGTGATTAAACTCCCTACTGTATTCAGTTCACTGCGAGATATATTGGGATCTGAGCATGAAGAGGCCATTCATGCAGCAGTGAACGCATTTAAGAGTCTTATTCATGCTTGCATTGATGAAAGCTTGATCAAACAGGGGGTTGACCAGATTTTGAAGAATGGAAATATGGATGAACGGATGTCTGGGCCAACTGTAATTGAAAAAGTGTGTGCTATTATTGAAAGCTTGCTTGGATACAACTACACTCCTGTCTTGGACCTTGTATTTCAAGTTGTTTCAGCGATGTTTGATAGATTAGGGGTATACTCTTCTTATTTCATGAGGGGCACACTGAAGAGCTTGGCAGACATGGAAAAGCTGCCTGGTGAAGATTTTCCTTTCAGGAAAGAGCTGCATGAATGCCTCGGAACGGCTCTTGTTGCTATGGGACCTGAAACTTTTATAGGCTTTCTGCCTCTTAATTTGGAGGCTGAAGACCTTAGTGAGGTGAACGTTTGGCTTTTTCCAATATTGAAGCAGTATACAATTGGTGCGCGATTGAGCTTTTTTATGGAGTCAATTTTGGGTATGGTCGAAGTGATACGGAATAAATCTCGACAGCTTGAGTCACAAGGACGTATTTTTTCATCAAGGAGTACAGACGCACTTTTATACTCTTTGTGGTCACTGTTACCTTCATTTTGCAACTTCCCTTCTGATACTGCTGAGAGTTTCAATGATCTGAAGCAAGCTTTGTGCAACGCTCTTCGTGATGAACCTGAGATTCGTGGAATAATATGCTTGAGCTTGCAAATTCTTGTTCAACAAAATAAGAAAATTGTGGAAGAAGTGAATGATCTGTCTGATAGCGAAGTGGGTACTGCCAAACAGAGAGCTATGGCTAATTATACCCCTCAGGTTATGACAGATAACTTGAGCGTGCTCAAATCAAGTGCGCGCGAGATCTTGACTGTTCTATCAGGTGTCTTCTTGAATTCTACAAAAGATGATGGAGGTTGTTTACAGTCCACAATTGGTGAGTTTGCATCAATATCAGATAAAGCAGTTGTGTCAAGGTTGTTTCTAAGTAATATGCACAAGCTTTTGAGGGTCACTAAAGAGGCCAGGGCAGCTGCAAGTTCTAGTGATTCTAATTCCATGCAGAGGGCACTACTATTTGACTTGTCAGTTTCATTTTTACCTGGTTTAAATGCTGATGAGGTTGATGTGTTGTTTAACGCAATAAAGCCTGCATTACAGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC173

Protein Analysis

753

Amino Acids

82.41

Weight (kDa)

5.49

Isoelectric Point (pI)

46.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HEAT_RRP12_N	PF25772	16 - 289	3.7e-100	RRP12-like, N-terminal HEAT repeats
RRP12_HEAT	PF08161	355 - 662	3.4e-76	Ribosomal RNA-processing protein 12, HEAT repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006794)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34357
fragaria_vesca	FvH4_1g09210 FvH4_6g18960
malus_domestica	MD02G1098900.v1.1 MD02G1099100.v1.1 MD15G1221900.v1.1
prunus_persica	Prupe.6G204300_v2.0.a1 Prupe.6G204300_v2.0.a1 Prupe.6G204500_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G193800_v2.0.a1
pyrus_communis	pycom02g07730 pycom15g19640
rosa_chinensis	RchiOBHm_Chr2g0095731
rosa_laevigata	RLG00000016587 RLG00000016588
rosa_multiflora	Rmu_sc0001309.1_g000002 Rmu_sc0001309.1_g000003
rosa_roxburghii	Rroxscaffold_2G00146140
rosa_rugosa	Rorug02G0052900
rosa_samantha	Rh2AG101100 Rh2BG102800 Rh2CG105200 Rh2DG102600
rosa_wichuraiana	Rw2G007670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	212
AccI	GTMKAC	3 cut(s)	746, 1317, 1535
AccII	CGCG	8 cut(s)	118, 120, 218, 278, 561, 1549, 1951, 1953
AccIII	TCCGGA	1 cut(s)	306
AciI	CCGC	7 cut(s)	26, 29, 51, 153, 216, 523, 553
AclI	AACGTT	1 cut(s)	1506
AclWI	GGATC	2 cut(s)	760, 1069
AcoI	YGGCCR	1 cut(s)	300
AcsI	RAATTY	2 cut(s)	1806, 1987
AcuI	CTGAAG	3 cut(s)	1367, 1506, 1757
AcvI	CACGTG	1 cut(s)	99
AcyI	GRCGYC	3 cut(s)	66, 72, 213
AfaI	GTAC	3 cut(s)	567, 1651, 1873
AfiI	CCNNNNNNNGG	6 cut(s)	411, 529, 791, 1423, 1498, 2157
AjnI	CCWGG	5 cut(s)	162, 360, 1375, 2117, 2194
AjuI	GAANNNNNNNTTGG	2 cut(s)	1227, 1259
AloI	GAACNNNNNNTCC	2 cut(s)	348, 380
Alw21I	GWGCWC	4 cut(s)	224, 373, 777, 1938
Alw26I	GTCTC	7 cut(s)	198, 231, 319, 412, 698, 854, 922
AlwI	GGATC	2 cut(s)	760, 1069
Ama87I	CYCGRG	2 cut(s)	695, 770
Aor13HI	TCCGGA	1 cut(s)	306
AoxI	GGCC	6 cut(s)	159, 300, 680, 1077, 1199, 2115
ApeKI	GCWGC	8 cut(s)	447, 592, 668, 1088, 1372, 1405, 2123, 2126
ApoI	RAATTY	2 cut(s)	1806, 1987
ArsI	GACNNNNNNTTYG	2 cut(s)	348, 380
Asp700I	GAANNNNTTC	1 cut(s)	1386
AspLEI	GCGC	9 cut(s)	120, 143, 215, 280, 430, 822, 1549, 1951, 1953
AspS9I	GGNCC	6 cut(s)	124, 160, 680, 1199, 1270, 1442
AsuC2I	CCSGG	2 cut(s)	412, 452
AsuHPI	GGTGA	5 cut(s)	544, 591, 1391, 1513, 2042
AvaI	CYCGRG	2 cut(s)	695, 770
AvaII	GGWCC	3 cut(s)	124, 1270, 1442
AxyI	CCTNAGG	2 cut(s)	528, 1908
BaeGI	GKGCMC	2 cut(s)	1343, 2164
BanI	GGYRCC	1 cut(s)	212
BanII	GRGCYC	2 cut(s)	258, 777
BauI	CACGAG	1 cut(s)	329
BbrPI	CACGTG	1 cut(s)	99
BbsI	GAAGAC	2 cut(s)	1494, 1972
Bbv12I	GWGCWC	4 cut(s)	224, 373, 777, 1938
BbvI	GCAGC	8 cut(s)	459, 579, 655, 1100, 1359, 1392, 2113, 2135
BccI	CCATC	3 cut(s)	401, 824, 1997
BceAI	ACGGC	5 cut(s)	128, 287, 389, 972, 1440
BciT130I	CCWGG	5 cut(s)	164, 362, 1377, 2119, 2196
BciVI	GTATCC	1 cut(s)	1241
BclI	TGATCA	2 cut(s)	889, 1140
BcnI	CCSGG	2 cut(s)	412, 452
BcoDI	GTCTC	7 cut(s)	198, 231, 319, 412, 698, 854, 922
BfaI	CTAG	2 cut(s)	672, 2136
BfoI	RGCGCY	1 cut(s)	216
BfuI	GTATCC	1 cut(s)	1241
BglII	AGATCT	1 cut(s)	1956
Bme1390I	CCNGG	7 cut(s)	164, 362, 412, 452, 1377, 2119, 2196
Bme18I	GGWCC	3 cut(s)	124, 1270, 1442
BmeT110I	CYCGRG	2 cut(s)	695, 770
BmgT120I	GGNCC	6 cut(s)	124, 160, 680, 1199, 1270, 1442
BmiI	GGNNCC	5 cut(s)	214, 249, 255, 403, 1443
BmrFI	CCNGG	7 cut(s)	164, 362, 412, 452, 1377, 2119, 2196
BmsI	GCATC	2 cut(s)	706, 2048
BpiI	GAAGAC	2 cut(s)	1494, 1972
BpuEI	CTTGAG	3 cut(s)	1637, 1816, 1948
BpuMI	CCSGG	2 cut(s)	412, 452
BsaAI	YACGTR	1 cut(s)	99
BsaHI	GRCGYC	3 cut(s)	66, 72, 213
BsaJI	CCNNGG	6 cut(s)	162, 163, 297, 580, 1417, 2118
BsaWI	WCCGGW	3 cut(s)	196, 260, 306
Bsc4I	CCNNNNNNNGG	6 cut(s)	411, 529, 791, 1423, 1498, 2157
Bse118I	RCCGGY	1 cut(s)	601
Bse1I	ACTGG	1 cut(s)	473
Bse21I	CCTNAGG	2 cut(s)	528, 1908
BseAI	TCCGGA	1 cut(s)	306
BseBI	CCWGG	5 cut(s)	164, 362, 1377, 2119, 2196
BseDI	CCNNGG	6 cut(s)	162, 163, 297, 580, 1417, 2118
BseGI	GGATG	5 cut(s)	721, 835, 946, 1189, 1197
BseLI	CCNNNNNNNGG	6 cut(s)	411, 529, 791, 1423, 1498, 2157
BseMII	CTCAG	7 cut(s)	494, 497, 890, 1056, 1710, 1764, 1922
BseNI	ACTGG	1 cut(s)	473
BsePI	GCGCGC	1 cut(s)	1949
BseRI	GAGGAG	2 cut(s)	272, 864
BseSI	GKGCMC	2 cut(s)	1343, 2164
BseXI	GCAGC	8 cut(s)	459, 579, 655, 1100, 1359, 1392, 2113, 2135
BsgI	GTGCAG	2 cut(s)	67, 578
Bsh1236I	CGCG	8 cut(s)	118, 120, 218, 278, 561, 1549, 1951, 1953
BshFI	GGCC	6 cut(s)	161, 302, 682, 1079, 1201, 2117
BshNI	GGYRCC	1 cut(s)	212
BsiHKAI	GWGCWC	4 cut(s)	224, 373, 777, 1938
BsiHKCI	CYCGRG	2 cut(s)	695, 770
BsiSI	CCGG	8 cut(s)	197, 251, 261, 307, 399, 411, 451, 602
BslFI	GGGAC	3 cut(s)	598, 807, 1455
BslI	CCNNNNNNNGG	6 cut(s)	411, 529, 791, 1423, 1498, 2157
BsmAI	GTCTC	7 cut(s)	198, 231, 319, 412, 698, 854, 922
BsmBI	CGTCTC	3 cut(s)	198, 231, 412
BsmFI	GGGAC	3 cut(s)	598, 807, 1455
BsmI	GAATGC	1 cut(s)	1418
BsnI	GGCC	6 cut(s)	161, 302, 682, 1079, 1201, 2117
BsoBI	CYCGRG	2 cut(s)	695, 770
Bsp1286I	GDGCHC	7 cut(s)	224, 258, 373, 777, 1343, 1938, 2164
Bsp13I	TCCGGA	1 cut(s)	306
Bsp143I	GATC	9 cut(s)	232, 270, 765, 889, 1061, 1140, 1732, 1849, 1956
Bsp19I	CCATGG	1 cut(s)	297
BspACI	CCGC	7 cut(s)	26, 29, 51, 153, 216, 523, 553
BspANI	GGCC	6 cut(s)	161, 302, 682, 1079, 1201, 2117
BspCNI	CTCAG	7 cut(s)	495, 496, 889, 1057, 1711, 1765, 1921
BspEI	TCCGGA	1 cut(s)	306
BspFNI	CGCG	8 cut(s)	118, 120, 218, 278, 561, 1549, 1951, 1953
BspHI	TCATGA	1 cut(s)	1332
BspLI	GGNNCC	5 cut(s)	214, 249, 255, 403, 1443
BspPI	GGATC	2 cut(s)	760, 1069
BspQI	GCTCTTC	4 cut(s)	15, 332, 1343, 1764
BspT107I	GGYRCC	1 cut(s)	212
BsrFI	RCCGGY	1 cut(s)	601
BsrI	ACTGG	1 cut(s)	473
BssAI	RCCGGY	1 cut(s)	601
BssECI	CCNNGG	6 cut(s)	162, 163, 297, 580, 1417, 2118
BssHII	GCGCGC	1 cut(s)	1949
BssMI	GATC	9 cut(s)	232, 270, 765, 889, 1061, 1140, 1732, 1849, 1956
BssNAI	GTATAC	2 cut(s)	1318, 1536
BssNI	GRCGYC	3 cut(s)	66, 72, 213
BssSI	CACGAG	1 cut(s)	329
BssT1I	CCWWGG	2 cut(s)	297, 580
Bst1107I	GTATAC	2 cut(s)	1318, 1536
Bst2BI	CACGAG	1 cut(s)	329
Bst2UI	CCWGG	5 cut(s)	164, 362, 1377, 2119, 2196
Bst4CI	ACNGT	5 cut(s)	1033, 1207, 1683, 1966, 2019
Bst6I	CTCTTC	6 cut(s)	15, 332, 1068, 1327, 1343, 1764
BstACI	GRCGYC	3 cut(s)	66, 72, 213
BstBAI	YACGTR	1 cut(s)	99
BstDSI	CCRYGG	1 cut(s)	297
BstENI	CCTNNNNNAGG	1 cut(s)	1496
BstF5I	GGATG	5 cut(s)	721, 835, 946, 1189, 1197
BstFNI	CGCG	8 cut(s)	118, 120, 218, 278, 561, 1549, 1951, 1953
BstH2I	RGCGCY	1 cut(s)	216
BstHHI	GCGC	9 cut(s)	120, 143, 215, 280, 430, 822, 1549, 1951, 1953
BstKTI	GATC	9 cut(s)	235, 273, 768, 892, 1064, 1143, 1735, 1852, 1959
BstMAI	GTCTC	7 cut(s)	198, 231, 319, 412, 698, 854, 922
BstMBI	GATC	9 cut(s)	232, 270, 765, 889, 1061, 1140, 1732, 1849, 1956
BstMWI	GCNNNNNNNGC	5 cut(s)	219, 1085, 1097, 1433, 2123
BstNI	CCWGG	5 cut(s)	164, 362, 1377, 2119, 2196
BstSCI	CCNGG	7 cut(s)	162, 360, 410, 450, 1375, 2117, 2194
BstSLI	GKGCMC	2 cut(s)	1343, 2164
BstUI	CGCG	8 cut(s)	118, 120, 218, 278, 561, 1549, 1951, 1953
BstV1I	GCAGC	8 cut(s)	459, 579, 655, 1100, 1359, 1392, 2113, 2135
BstV2I	GAAGAC	2 cut(s)	1494, 1972
BstX2I	RGATCY	3 cut(s)	765, 1061, 1956
BstXI	CCANNNNNNTGG	1 cut(s)	16
BstYI	RGATCY	3 cut(s)	765, 1061, 1956
BstZ17I	GTATAC	2 cut(s)	1318, 1536
Bsu36I	CCTNAGG	2 cut(s)	528, 1908
BsuI	GTATCC	1 cut(s)	1241
BsuRI	GGCC	6 cut(s)	161, 302, 682, 1079, 1201, 2117
BtgI	CCRYGG	1 cut(s)	297
BtgZI	GCGATG	3 cut(s)	379, 576, 1310
BtsCI	GGATG	5 cut(s)	721, 835, 946, 1189, 1197
BtsI	GCAGTG	2 cut(s)	1043, 1098
BtsIMutI	CAGTG	4 cut(s)	1043, 1098, 1343, 1679
CciI	TCATGA	1 cut(s)	1332
CfoI	GCGC	9 cut(s)	120, 143, 215, 280, 430, 822, 1549, 1951, 1953
Cfr10I	RCCGGY	1 cut(s)	601
Cfr13I	GGNCC	6 cut(s)	124, 160, 680, 1199, 1270, 1442
CseI	GACGC	4 cut(s)	74, 80, 284, 1664
CsiI	ACCWGGT	1 cut(s)	2194
Csp6I	GTAC	3 cut(s)	566, 1650, 1872
CviQI	GTAC	3 cut(s)	566, 1650, 1872
DinI	GGCGCC	1 cut(s)	214
DpnI	GATC	9 cut(s)	234, 272, 767, 891, 1063, 1142, 1734, 1851, 1958
DpnII	GATC	9 cut(s)	232, 270, 765, 889, 1061, 1140, 1732, 1849, 1956
DraI	TTTAAA	3 cut(s)	724, 781, 2202
EaeI	YGGCCR	1 cut(s)	300
Eam1104I	CTCTTC	6 cut(s)	15, 332, 1068, 1327, 1343, 1764
EarI	CTCTTC	6 cut(s)	15, 332, 1068, 1327, 1343, 1764
Ecl136II	GAGCTC	1 cut(s)	775
Eco130I	CCWWGG	2 cut(s)	297, 580
Eco24I	GRGCYC	2 cut(s)	258, 777
Eco47I	GGWCC	3 cut(s)	124, 1270, 1442
Eco53kI	GAGCTC	1 cut(s)	775
Eco57I	CTGAAG	3 cut(s)	1367, 1506, 1757
Eco72I	CACGTG	1 cut(s)	99
Eco81I	CCTNAGG	2 cut(s)	528, 1908
Eco88I	CYCGRG	2 cut(s)	695, 770
EcoICRI	GAGCTC	1 cut(s)	775
EcoNI	CCTNNNNNAGG	1 cut(s)	1496
EcoO109I	RGGNCCY	1 cut(s)	1442
EcoRI	GAATTC	1 cut(s)	1987
EcoRII	CCWGG	5 cut(s)	162, 360, 1375, 2117, 2194
EcoT14I	CCWWGG	2 cut(s)	297, 580
EcoT38I	GRGCYC	2 cut(s)	258, 777
EgeI	GGCGCC	1 cut(s)	214
EheI	GGCGCC	1 cut(s)	214
ErhI	CCWWGG	2 cut(s)	297, 580
Esp3I	CGTCTC	3 cut(s)	198, 231, 412
FalI	AAGNNNNNCTT	2 cut(s)	717, 749
FaqI	GGGAC	3 cut(s)	598, 807, 1455
FauI	CCCGC	1 cut(s)	530
FbaI	TGATCA	2 cut(s)	889, 1140
FblI	GTMKAC	3 cut(s)	746, 1317, 1535
FokI	GGATG	5 cut(s)	728, 842, 953, 1196, 1204
FriOI	GRGCYC	2 cut(s)	258, 777
FspBI	CTAG	2 cut(s)	672, 2136
GlaI	GCGC	9 cut(s)	119, 142, 214, 279, 429, 821, 1548, 1950, 1952
HaeII	RGCGCY	1 cut(s)	216
HaeIII	GGCC	6 cut(s)	161, 302, 682, 1079, 1201, 2117
HapII	CCGG	8 cut(s)	197, 251, 261, 307, 399, 411, 451, 602
HgaI	GACGC	4 cut(s)	74, 80, 284, 1664
HhaI	GCGC	9 cut(s)	120, 143, 215, 280, 430, 822, 1549, 1951, 1953
Hin1I	GRCGYC	3 cut(s)	66, 72, 213
Hin6I	GCGC	9 cut(s)	118, 141, 213, 278, 428, 820, 1547, 1949, 1951
HinP1I	GCGC	9 cut(s)	118, 141, 213, 278, 428, 820, 1547, 1949, 1951
HincII	GTYRAC	4 cut(s)	352, 457, 747, 1156
HindII	GTYRAC	4 cut(s)	352, 457, 747, 1156
HindIII	AAGCTT	4 cut(s)	1135, 1237, 1743, 2093
HpaI	GTTAAC	1 cut(s)	352
HpaII	CCGG	8 cut(s)	197, 251, 261, 307, 399, 411, 451, 602
HphI	GGTGA	5 cut(s)	544, 591, 1391, 1513, 2042
Hpy99I	CGWCG	4 cut(s)	68, 74, 278, 446
HpyAV	CCTTC	5 cut(s)	64, 671, 679, 1698, 1716
HpyCH4III	ACNGT	5 cut(s)	1033, 1207, 1683, 1966, 2019
HpyCH4IV	ACGT	4 cut(s)	98, 867, 1506, 1630
HpyF10VI	GCNNNNNNNGC	5 cut(s)	219, 1085, 1097, 1433, 2123
HpySE526I	ACGT	4 cut(s)	98, 867, 1506, 1630
Hsp92I	GRCGYC	3 cut(s)	66, 72, 213
HspAI	GCGC	9 cut(s)	118, 141, 213, 278, 428, 820, 1547, 1949, 1951
KasI	GGCGCC	1 cut(s)	212
Kpn2I	TCCGGA	1 cut(s)	306
Ksp22I	TGATCA	2 cut(s)	889, 1140
KspAI	GTTAAC	1 cut(s)	352
Kzo9I	GATC	9 cut(s)	232, 270, 765, 889, 1061, 1140, 1732, 1849, 1956
LguI	GCTCTTC	4 cut(s)	15, 332, 1343, 1764
LmnI	GCTCC	4 cut(s)	247, 253, 285, 401
Lsp1109I	GCAGC	8 cut(s)	459, 579, 655, 1100, 1359, 1392, 2113, 2135
LweI	GCATC	2 cut(s)	706, 2048
MabI	ACCWGGT	1 cut(s)	2194
MaeI	CTAG	2 cut(s)	672, 2136
MaeII	ACGT	4 cut(s)	98, 867, 1506, 1630
MaeIII	GTNAC	7 cut(s)	263, 555, 811, 1620, 1677, 1683, 2104
MalI	GATC	9 cut(s)	234, 272, 767, 891, 1063, 1142, 1734, 1851, 1958
MboI	GATC	9 cut(s)	232, 270, 765, 889, 1061, 1140, 1732, 1849, 1956
MfeI	CAATTG	3 cut(s)	1007, 1539, 2025
MflI	RGATCY	3 cut(s)	765, 1061, 1956
MhlI	GDGCHC	7 cut(s)	224, 258, 373, 777, 1343, 1938, 2164
Mly113I	GGCGCC	1 cut(s)	213
MlyI	GAGTC	5 cut(s)	351, 700, 1117, 1577, 1628
MmeI	TCCRAC	1 cut(s)	945
MroI	TCCGGA	1 cut(s)	306
MroXI	GAANNNNTTC	1 cut(s)	1386
MseI	TTAA	8 cut(s)	351, 723, 780, 1020, 1104, 1473, 2201, 2229
MslI	CAYNNNNRTG	1 cut(s)	14
MspA1I	CMGCKG	2 cut(s)	668, 2126
MspI	CCGG	8 cut(s)	197, 251, 261, 307, 399, 411, 451, 602
MspR9I	CCNGG	7 cut(s)	164, 362, 412, 452, 1377, 2119, 2196
MunI	CAATTG	3 cut(s)	1007, 1539, 2025
Mva1269I	GAATGC	1 cut(s)	1418
MvaI	CCWGG	5 cut(s)	164, 362, 1377, 2119, 2196
MvnI	CGCG	8 cut(s)	118, 120, 218, 278, 561, 1549, 1951, 1953
MwoI	GCNNNNNNNGC	5 cut(s)	219, 1085, 1097, 1433, 2123
NarI	GGCGCC	1 cut(s)	213
NciI	CCSGG	2 cut(s)	412, 452
NcoI	CCATGG	1 cut(s)	297
NdeII	GATC	9 cut(s)	232, 270, 765, 889, 1061, 1140, 1732, 1849, 1956
NlaIV	GGNNCC	5 cut(s)	214, 249, 255, 403, 1443
NmuCI	GTSAC	4 cut(s)	263, 1620, 1677, 2104
PaeR7I	CTCGAG	2 cut(s)	695, 770
PagI	TCATGA	1 cut(s)	1332
PasI	CCCWGGG	1 cut(s)	163
PauI	GCGCGC	1 cut(s)	1949
PciSI	GCTCTTC	4 cut(s)	15, 332, 1343, 1764
PcsI	WCGNNNNNNNCGW	3 cut(s)	72, 402, 768
PctI	GAATGC	1 cut(s)	1418
PdmI	GAANNNNTTC	1 cut(s)	1386
PfeI	GAWTC	5 cut(s)	237, 325, 518, 1777, 2141
PleI	GAGTC	5 cut(s)	351, 699, 1116, 1576, 1627
PluTI	GGCGCC	1 cut(s)	216
PmaCI	CACGTG	1 cut(s)	99
PmlI	CACGTG	1 cut(s)	99
PpsI	GAGTC	5 cut(s)	351, 699, 1116, 1576, 1627
Ppu21I	YACGTR	1 cut(s)	99
PpuMI	RGGWCCY	1 cut(s)	1442
Psp124BI	GAGCTC	1 cut(s)	777
Psp1406I	AACGTT	1 cut(s)	1506
Psp5II	RGGWCCY	1 cut(s)	1442
Psp6I	CCWGG	5 cut(s)	162, 360, 1375, 2117, 2194
PspCI	CACGTG	1 cut(s)	99
PspGI	CCWGG	5 cut(s)	162, 360, 1375, 2117, 2194
PspN4I	GGNNCC	5 cut(s)	214, 249, 255, 403, 1443
PspPI	GGNCC	6 cut(s)	124, 160, 680, 1199, 1270, 1442
PspPPI	RGGWCCY	1 cut(s)	1442
PspXI	VCTCGAGB	1 cut(s)	770
PsuI	RGATCY	3 cut(s)	765, 1061, 1956
PteI	GCGCGC	1 cut(s)	1949
PvuII	CAGCTG	2 cut(s)	668, 2126
RsaI	GTAC	3 cut(s)	567, 1651, 1873
RsaNI	GTAC	3 cut(s)	566, 1650, 1872
RseI	CAYNNNNRTG	1 cut(s)	14
SacI	GAGCTC	1 cut(s)	777
SalI	GTCGAC	1 cut(s)	745
SapI	GCTCTTC	4 cut(s)	15, 332, 1343, 1764
SaqAI	TTAA	8 cut(s)	351, 723, 780, 1020, 1104, 1473, 2201, 2229
Sau3AI	GATC	9 cut(s)	232, 270, 765, 889, 1061, 1140, 1732, 1849, 1956
Sau96I	GGNCC	6 cut(s)	124, 160, 680, 1199, 1270, 1442
SchI	GAGTC	5 cut(s)	351, 700, 1117, 1577, 1628
ScrFI	CCNGG	7 cut(s)	164, 362, 412, 452, 1377, 2119, 2196
SduI	GDGCHC	7 cut(s)	224, 258, 373, 777, 1343, 1938, 2164
SexAI	ACCWGGT	1 cut(s)	2194
SfaNI	GCATC	2 cut(s)	706, 2048
SfoI	GGCGCC	1 cut(s)	214
Sfr274I	CTCGAG	2 cut(s)	695, 770
SinI	GGWCC	3 cut(s)	124, 1270, 1442
SlaI	CTCGAG	2 cut(s)	695, 770
SmiMI	CAYNNNNRTG	1 cut(s)	14
SmlI	CTYRAG	5 cut(s)	695, 770, 1616, 1795, 1927
SmoI	CTYRAG	5 cut(s)	695, 770, 1616, 1795, 1927
SsiI	CCGC	7 cut(s)	26, 29, 51, 153, 216, 523, 553
SspDI	GGCGCC	1 cut(s)	212
SspI	AATATT	1 cut(s)	1524
SspMI	CTAG	2 cut(s)	672, 2136
SstI	GAGCTC	1 cut(s)	777
StyD4I	CCNGG	7 cut(s)	162, 360, 410, 450, 1375, 2117, 2194
StyI	CCWWGG	2 cut(s)	297, 580
TaaI	ACNGT	5 cut(s)	1033, 1207, 1683, 1966, 2019
TaiI	ACGT	4 cut(s)	101, 870, 1509, 1633
TaqI	TCGA	9 cut(s)	57, 235, 273, 696, 746, 771, 852, 1587, 1609
TatI	WGTACW	2 cut(s)	565, 1649
TauI	GCSGC	4 cut(s)	28, 31, 156, 218
TfiI	GAWTC	5 cut(s)	237, 325, 518, 1777, 2141
Tru1I	TTAA	8 cut(s)	351, 723, 780, 1020, 1104, 1473, 2201, 2229
Tru9I	TTAA	8 cut(s)	351, 723, 780, 1020, 1104, 1473, 2201, 2229
TscAI	CASTG	4 cut(s)	1050, 1098, 1350, 1686
TseFI	GTSAC	4 cut(s)	263, 1620, 1677, 2104
TseI	GCWGC	8 cut(s)	447, 592, 668, 1088, 1372, 1405, 2123, 2126
Tsp45I	GTSAC	4 cut(s)	263, 1620, 1677, 2104
TspGWI	ACGGA	5 cut(s)	180, 369, 842, 1204, 1612
TspRI	CASTG	4 cut(s)	1050, 1098, 1350, 1686
VpaK11BI	GGWCC	3 cut(s)	124, 1270, 1442
XagI	CCTNNNNNAGG	1 cut(s)	1496
XapI	RAATTY	2 cut(s)	1806, 1987
XhoI	CTCGAG	2 cut(s)	695, 770
XmiI	GTMKAC	3 cut(s)	746, 1317, 1535
XmnI	GAANNNNTTC	1 cut(s)	1386
XspI	CTAG	2 cut(s)	672, 2136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.