Rmu_sc0001309.1_g000003

RRP12-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001309.1
Physical Location & Seq
Forward (+)
15237 .. 23513
8277 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001309.1_g000003.1.cds

Sequence Viewer

Length: 3867 bp
atggccgtccggaaagtctcgccggcgattctcgtgaagaagagcgacctcgttaacggactcctggttcgtgctctcctgtccatctctttgaccgtcgccggagccgtctccgggttgaaatgtatagcgcatttgctcatcgtcggcagccgggtcaaccacaacaactggtcagacatttctcagctctatggcttcttactgagcttcgctaccgattcccgccctaaggtgaaaaggcaatcacatttgcggttacatgatgtactacaaagtttccaagggacttcgctgcactcaccggcaagtcaaggcattactgatttattcaaaaggtttattctgcttgccggtggaacaaaaccagctgctagtgaagggccaaaggggagtctcgaggttttatatcttttggatgcttttaaagaatgtcttgctcttatgtcaaccaagaataaaaacgagatcctcgagctctttaaacctctcttgggactgcaaaaccctgttgttacaaggcgcataacggatggtttgtataggctttgtctcgaaccatgtccagatgtttctcctcagatattgcttgatcaactatgcttattatctctttctgtctccaacaataagacatctgtggatgacatgacatttacggctcgtttgctcaatattggaatgacaaaggtttattcactcaacaggcagttgtgcgtgattaaactccctactgtattcagtgcactacgagatatattgggatctgagcatgaagaggccattcatgcagcagtgaacgcatttaagagtcttattcatgcttgcattgatgaaagcttgatcaaacagggggttgaccagattgtgaagaatggaaatatggatgaacggaggtctgggccaactgtaattgaaaaagtgtgtgctattattgaaagcttgcttggatacaactacactcctgtcttggaccttgtatttcaagttgtttcagcgatgtttgatagattaggggtatactcttcttatttcatgagggggacactgaagagcttggcagacatggaaaagctgcctgatgaagattttcctttcaggaaagagctgcatgaatgcctcggaacggctcttgttgctatgggacctgaaacttttataggctttctgcctcttaatttggaggctgaagaccttagtgaggtgaacgtttggctttttcctatattgaagcagtatacaattggtgcgcgattgagcttttttatggagtcaattttgggtatggttgaagtgatacggaataaatctcgacagcttgagtcacaaggtcgtattttttcatcaaggagtacagacgcacttatatactctttgtggtcactgttaccttcattttgcaacttcccttctgatactgctgagagtttcaatgatctgaagcaagctttgtgcaacgcccttcgtgatgaacctgagattcgtggaataatatgcttgagcttgcaaattcttgttcaacaaaataagaatattgtggaagaagtgaatgatctgtctgatagcgaagtaggtactgccaaacagagagctatggctaattatacccctcaggttatgacagataacttgagcgtgctcaaatcaagtgcgtgtgagatcttgactgttctatcaggtgtcttcttgaattctacaaaagatgatggaggttgtttgcagtccacaattggtgagtttgcgtcaatatcagataaagcagttgtgtcaaggttgtttctaagtaatatgcacaagcttttgagggtcactaaagaggccagggcagctgcaagttctagtgattctaattccaggcagagggcactactatttgacttgtcagtttcatttttacctggtttaaatgctgatgaggttgatgtgttgtttaacgcaataaagcctgcattacaggatgatgaaggtttgatacagaagaaggcgtacaaagttctttcaattattcttcgggactttgaggggtttatctcttcgaagctcgaggatttgcttagactgatggtggaattgctgccttcatgccatttttcagctagacggcatagacttgactgcttgtacctcctaatagtccatgtttcaaagagcgagacagagcagaggtggcttgacatcataagttctttcctaacagagataattcttgggcttaaagaggctaacaagaaaacaagaaacaaagcatatgatatccttgtccagattggtcatgcttgtggggatgaggagaaaggcgggaagaaagagaacctgtatcaattctttaacatggtagctggaggcctggctggcgaaacccctgttataatcagtgctgcaatgagaggcttagctaggttggcttatgagttttctgaccttgtgtcgtctgctaccaatttgcttccatcaacatttctgctcctccagagaaagaacagagaaataattaaagctaatttaggcttgctgaaggtattggttgccaaatcacaagctgaggggttgcaattgcacttgaaaagcatggttgaagccttgttgaagtggcaagatgatactaaaactcatttcaaaagcaagattaagcttctactagaaatgctcgtcaagaaatgtgggctggatgctgttaaggctgtcatgcctcaagagcacatgaaactacttaccaacattcggaagattaaggaacgaaaagataagaaacaacagggttctagatcggaggaagctaaatctcatgcatccaaagcaactacagccaggctaagcagatggaaccattcaaaagtattttctgatttcggtgatgaagaaactgatgatagtaatacggattatatggattcccaaacagtcactggccggtgtggcaaggcttcacacttcaaatctaaagcatcttcatcacgggccaagagtagaacaaatcagaacttgcctgaccacttatttaatcaactagaagacgagcctcttgacttacttgatcggcaaagaacaaggtccgcacttcgatcatcagagaatttaaaacgtaaaatggagtctgatgaagggccagagatagaccctgatgggcgcctcataattcatgaagaaccaaactcgtacaacaaaaagccatctcatcctgattcagatgcaaggagcgaagcaggaagtcacttgtctgtgaatacaaagaaaatacagaagcgaaggaagacatcagaatctggatgggcttcaactggcaatgagtatgccagcaagaaggctggtggggatttgaaaaagaaggacaagcttgaaccatacgcgtattggccacttgatcgcaagatgatgagccgcagaccagagcatagggctgctgccaggaaagggatatcaagtgtggttaggatgacaaagaagcttgaagggaagagtgcctcaagtatactcaccagtaaaggcttgaagtttaaaagggtccagaagaagggcagcaagagaaaaagtcgacgccgttccggaatcgggacctcccctttccggctacttcggtgccttccgccgattcccctctttttgttgaagtcgacgccgttccggaatcaggacctcccctttccggctacttcagtgccttccgccgattcccctcttttttgttttactacactcacccctgcacgcatgtcgacgccgttccggaatcaggacctcccctttccggctacttcggtgccttccgccgattcccctctttttgttgaagtcgacgccgttccggaattaggacctcccctttccggctacttcagtgccttccgccgattcccctctttttgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1288

Amino Acids

143.41

Weight (kDa)

9.22

Isoelectric Point (pI)

51.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2369
AccB1I GGYRCC 3 cut(s) 3126, 3576, 3757
AccI GTMKAC 7 cut(s) 1020, 1238, 3469, 3532, 3611, 3713, 3792
AccII CGCG 2 cut(s) 1252, 3347
AccIII TCCGGA 5 cut(s) 9, 3542, 3621, 3723, 3802
AciI CCGC 9 cut(s) 226, 256, 2298, 3054, 3379, 3584, 3663, 3765, 3844
AclI AACGTT 1 cut(s) 1209
AclWI GGATC 2 cut(s) 463, 772
AcoI YGGCCR 3 cut(s) 3, 2908, 3353
AcsI RAATTY 3 cut(s) 1509, 1690, 3073
AcuI CTGAAG 6 cut(s) 1070, 1209, 1460, 2534, 3636, 3817
AcyI GRCGYC 5 cut(s) 3127, 3535, 3614, 3716, 3795
AfaI GTAC 6 cut(s) 270, 1354, 1576, 1988, 2123, 3158
AflIII ACRYGT 1 cut(s) 3345
AhdI GACNNNNNGTC 1 cut(s) 2425
AjnI CCWGG 7 cut(s) 63, 1820, 1853, 1897, 2346, 2807, 3404
AjuI GAANNNNNNNTTGG 2 cut(s) 930, 962
AloI GAACNNNNNNTCC 2 cut(s) 51, 83
Alw21I GWGCWC 5 cut(s) 76, 480, 748, 1641, 2700
Alw26I GTCTC 6 cut(s) 22, 115, 401, 557, 625, 2147
Alw44I GTGCAC 1 cut(s) 744
AlwI GGATC 2 cut(s) 463, 772
AlwNI CAGNNNCTG 2 cut(s) 2906, 3263
Ama87I CYCGRG 3 cut(s) 398, 473, 2042
Aor13HI TCCGGA 5 cut(s) 9, 3542, 3621, 3723, 3802
ApaLI GTGCAC 1 cut(s) 744
ApoI RAATTY 3 cut(s) 1509, 1690, 3073
ArsI GACNNNNNNTTYG 2 cut(s) 51, 83
Asp700I GAANNNNTTC 1 cut(s) 1089
AspLEI GCGC 4 cut(s) 133, 525, 1252, 3129
AsuC2I CCSGG 2 cut(s) 115, 155
AsuHPI GGTGA 7 cut(s) 247, 294, 1216, 1745, 2864, 3466, 3688
AsuII TTCGAA 1 cut(s) 2036
AvaI CYCGRG 3 cut(s) 398, 473, 2042
AvaII GGWCC 8 cut(s) 973, 1145, 3051, 3502, 3552, 3631, 3733, 3812
AxyI CCTNAGG 2 cut(s) 231, 1611
BaeGI GKGCMC 2 cut(s) 748, 1867
BalI TGGCCA 1 cut(s) 3355
BanI GGYRCC 3 cut(s) 3126, 3576, 3757
BanII GRGCYC 1 cut(s) 480
BarI GAAGNNNNNNTAC 4 cut(s) 1956, 1970, 1988, 2002
BauI CACGAG 1 cut(s) 32
BbsI GAAGAC 4 cut(s) 1197, 1675, 3018, 3257
Bbv12I GWGCWC 5 cut(s) 76, 480, 748, 1641, 2700
BbvCI CCTCAGC 1 cut(s) 2541
BccI CCATC 9 cut(s) 92, 527, 1700, 2056, 2458, 2814, 3116, 3178, 3261
BceAI ACGGC 8 cut(s) 92, 675, 1143, 2117, 3522, 3601, 3703, 3782
BcgI CGANNNNNNTGC 2 cut(s) 3693, 3727
BciT130I CCWGG 7 cut(s) 65, 1822, 1855, 1899, 2348, 2809, 3406
BciVI GTATCC 1 cut(s) 944
BclI TGATCA 2 cut(s) 592, 843
BcnI CCSGG 2 cut(s) 115, 155
BcoDI GTCTC 6 cut(s) 22, 115, 401, 557, 625, 2147
BfaI CTAG 7 cut(s) 375, 1839, 2097, 2397, 2639, 2763, 3008
BfmI CTRYAG 1 cut(s) 2802
BfoI RGCGCY 1 cut(s) 3130
BfuI GTATCC 1 cut(s) 944
BglI GCCNNNNNGGC 2 cut(s) 2352, 2916
BglII AGATCT 1 cut(s) 1659
BlpI GCTNAGC 2 cut(s) 2392, 2813
Bme1390I CCNGG 9 cut(s) 65, 115, 155, 1822, 1855, 1899, 2348, 2809, 3406
Bme18I GGWCC 8 cut(s) 973, 1145, 3051, 3502, 3552, 3631, 3733, 3812
BmeRI GACNNNNNGTC 1 cut(s) 2425
BmeT110I CYCGRG 3 cut(s) 398, 473, 2042
BmiI GGNNCC 8 cut(s) 106, 1146, 2825, 3128, 3503, 3553, 3578, 3759
BmrFI CCNGG 9 cut(s) 65, 115, 155, 1822, 1855, 1899, 2348, 2809, 3406
BmsI GCATC 5 cut(s) 409, 2659, 2798, 2954, 3178
BpiI GAAGAC 4 cut(s) 1197, 1675, 3018, 3257
BpmI CTGGAG 2 cut(s) 2361, 2453
Bpu10I CCTNAGC 1 cut(s) 2541
Bpu1102I GCTNAGC 2 cut(s) 2392, 2813
Bpu14I TTCGAA 1 cut(s) 2036
BpuEI CTTGAG 5 cut(s) 1340, 1519, 1651, 2676, 3448
BpuMI CCSGG 2 cut(s) 115, 155
BsaHI GRCGYC 5 cut(s) 3127, 3535, 3614, 3716, 3795
BsaJI CCNNGG 3 cut(s) 283, 1120, 1821
BsaWI WCCGGW 5 cut(s) 9, 3542, 3621, 3723, 3802
Bse118I RCCGGY 4 cut(s) 22, 304, 353, 2910
Bse1I ACTGG 4 cut(s) 176, 2911, 3283, 3477
Bse21I CCTNAGG 2 cut(s) 231, 1611
Bse3DI GCAATG 2 cut(s) 2388, 3289
BseAI TCCGGA 5 cut(s) 9, 3542, 3621, 3723, 3802
BseBI CCWGG 7 cut(s) 65, 1822, 1855, 1899, 2348, 2809, 3406
BseDI CCNNGG 3 cut(s) 283, 1120, 1821
BseMI GCAATG 2 cut(s) 2388, 3289
BseMII CTCAG 8 cut(s) 197, 200, 593, 759, 1413, 1467, 1625, 2532
BseNI ACTGG 4 cut(s) 176, 2911, 3283, 3477
BseRI GAGGAG 3 cut(s) 567, 2303, 2456
BseSI GKGCMC 2 cut(s) 748, 1867
BsgI GTGCAG 2 cut(s) 281, 3687
Bsh1236I CGCG 2 cut(s) 1252, 3347
BshNI GGYRCC 3 cut(s) 3126, 3576, 3757
BsiHKAI GWGCWC 5 cut(s) 76, 480, 748, 1641, 2700
BsiHKCI CYCGRG 3 cut(s) 398, 473, 2042
BslFI GGGAC 6 cut(s) 301, 510, 1057, 1158, 2027, 3565
BsmAI GTCTC 6 cut(s) 22, 115, 401, 557, 625, 2147
BsmBI CGTCTC 1 cut(s) 115
BsmFI GGGAC 6 cut(s) 301, 510, 1057, 1158, 2027, 3565
BsmI GAATGC 1 cut(s) 1121
BsoBI CYCGRG 3 cut(s) 398, 473, 2042
Bsp119I TTCGAA 1 cut(s) 2036
Bsp1286I GDGCHC 6 cut(s) 76, 480, 748, 1641, 1867, 2700
Bsp13I TCCGGA 5 cut(s) 9, 3542, 3621, 3723, 3802
Bsp1720I GCTNAGC 2 cut(s) 2392, 2813
BspACI CCGC 9 cut(s) 226, 256, 2298, 3054, 3379, 3584, 3663, 3765, 3844
BspCNI CTCAG 8 cut(s) 198, 199, 592, 760, 1414, 1468, 1624, 2533
BspEI TCCGGA 5 cut(s) 9, 3542, 3621, 3723, 3802
BspFNI CGCG 2 cut(s) 1252, 3347
BspHI TCATGA 2 cut(s) 1035, 3139
BspLI GGNNCC 8 cut(s) 106, 1146, 2825, 3128, 3503, 3553, 3578, 3759
BspPI GGATC 2 cut(s) 463, 772
BspQI GCTCTTC 2 cut(s) 35, 1046
BspT104I TTCGAA 1 cut(s) 2036
BspT107I GGYRCC 3 cut(s) 3126, 3576, 3757
BsrDI GCAATG 2 cut(s) 2388, 3289
BsrFI RCCGGY 4 cut(s) 22, 304, 353, 2910
BsrI ACTGG 4 cut(s) 176, 2911, 3283, 3477
BssAI RCCGGY 4 cut(s) 22, 304, 353, 2910
BssECI CCNNGG 3 cut(s) 283, 1120, 1821
BssNAI GTATAC 3 cut(s) 1021, 1239, 3470
BssNI GRCGYC 5 cut(s) 3127, 3535, 3614, 3716, 3795
BssSI CACGAG 1 cut(s) 32
BssT1I CCWWGG 1 cut(s) 283
Bst1107I GTATAC 3 cut(s) 1021, 1239, 3470
Bst2BI CACGAG 1 cut(s) 32
Bst2UI CCWGG 7 cut(s) 65, 1822, 1855, 1899, 2348, 2809, 3406
Bst4CI ACNGT 6 cut(s) 97, 736, 910, 1386, 1669, 2902
Bst6I CTCTTC 6 cut(s) 35, 771, 1030, 1046, 2038, 3449
BstACI GRCGYC 5 cut(s) 3127, 3535, 3614, 3716, 3795
BstBI TTCGAA 1 cut(s) 2036
BstENI CCTNNNNNAGG 1 cut(s) 1199
BstFNI CGCG 2 cut(s) 1252, 3347
BstH2I RGCGCY 1 cut(s) 3130
BstHHI GCGC 4 cut(s) 133, 525, 1252, 3129
BstMAI GTCTC 6 cut(s) 22, 115, 401, 557, 625, 2147
BstNI CCWGG 7 cut(s) 65, 1822, 1855, 1899, 2348, 2809, 3406
BstNSI RCATGY 1 cut(s) 3712
BstSCI CCNGG 9 cut(s) 63, 113, 153, 1820, 1853, 1897, 2346, 2807, 3404
BstSFI CTRYAG 1 cut(s) 2802
BstSLI GKGCMC 2 cut(s) 748, 1867
BstUI CGCG 2 cut(s) 1252, 3347
BstV2I GAAGAC 4 cut(s) 1197, 1675, 3018, 3257
BstX2I RGATCY 3 cut(s) 468, 764, 1659
BstYI RGATCY 3 cut(s) 468, 764, 1659
BstZ17I GTATAC 3 cut(s) 1021, 1239, 3470
Bsu36I CCTNAGG 2 cut(s) 231, 1611
BsuI GTATCC 1 cut(s) 944
BtgZI GCGATG 1 cut(s) 1013
BtsI GCAGTG 1 cut(s) 801
BtsIMutI CAGTG 8 cut(s) 748, 801, 1046, 1382, 2380, 2904, 3660, 3841
CaiI CAGNNNCTG 2 cut(s) 2906, 3263
CciI TCATGA 2 cut(s) 1035, 3139
CfoI GCGC 4 cut(s) 133, 525, 1252, 3129
Cfr10I RCCGGY 4 cut(s) 22, 304, 353, 2910
CseI GACGC 6 cut(s) 1367, 1731, 3543, 3622, 3724, 3803
CsiI ACCWGGT 1 cut(s) 1897
Csp6I GTAC 6 cut(s) 269, 1353, 1575, 1987, 2122, 3157
CspCI CAANNNNNGTGG 2 cut(s) 2641, 2676
CviQI GTAC 6 cut(s) 269, 1353, 1575, 1987, 2122, 3157
DinI GGCGCC 1 cut(s) 3128
DraI TTTAAA 5 cut(s) 427, 484, 1905, 3078, 3496
DriI GACNNNNNGTC 1 cut(s) 2425
EaeI YGGCCR 3 cut(s) 3, 2908, 3353
Eam1104I CTCTTC 6 cut(s) 35, 771, 1030, 1046, 2038, 3449
Eam1105I GACNNNNNGTC 1 cut(s) 2425
EarI CTCTTC 6 cut(s) 35, 771, 1030, 1046, 2038, 3449
EciI GGCGGA 4 cut(s) 3573, 3652, 3754, 3833
Ecl136II GAGCTC 1 cut(s) 478
Eco130I CCWWGG 1 cut(s) 283
Eco147I AGGCCT 1 cut(s) 2346
Eco24I GRGCYC 1 cut(s) 480
Eco32I GATATC 2 cut(s) 2254, 3417
Eco47I GGWCC 8 cut(s) 973, 1145, 3051, 3502, 3552, 3631, 3733, 3812
Eco53kI GAGCTC 1 cut(s) 478
Eco57I CTGAAG 6 cut(s) 1070, 1209, 1460, 2534, 3636, 3817
Eco81I CCTNAGG 2 cut(s) 231, 1611
Eco88I CYCGRG 3 cut(s) 398, 473, 2042
EcoICRI GAGCTC 1 cut(s) 478
EcoNI CCTNNNNNAGG 1 cut(s) 1199
EcoO109I RGGNCCY 5 cut(s) 1145, 3552, 3631, 3733, 3812
EcoRI GAATTC 1 cut(s) 1690
EcoRII CCWGG 7 cut(s) 63, 1820, 1853, 1897, 2346, 2807, 3404
EcoRV GATATC 2 cut(s) 2254, 3417
EcoT14I CCWWGG 1 cut(s) 283
EcoT22I ATGCAT 1 cut(s) 2791
EcoT38I GRGCYC 1 cut(s) 480
EgeI GGCGCC 1 cut(s) 3128
EheI GGCGCC 1 cut(s) 3128
ErhI CCWWGG 1 cut(s) 283
Esp3I CGTCTC 1 cut(s) 115
FalI AAGNNNNNCTT 2 cut(s) 420, 452
FaqI GGGAC 6 cut(s) 301, 510, 1057, 1158, 2027, 3565
FauI CCCGC 2 cut(s) 233, 2291
FauNDI CATATG 1 cut(s) 2248
FbaI TGATCA 2 cut(s) 592, 843
FblI GTMKAC 7 cut(s) 1020, 1238, 3469, 3532, 3611, 3713, 3792
FriOI GRGCYC 1 cut(s) 480
FspBI CTAG 7 cut(s) 375, 1839, 2097, 2397, 2639, 2763, 3008
GlaI GCGC 4 cut(s) 132, 524, 1251, 3128
GsuI CTGGAG 2 cut(s) 2361, 2453
HaeII RGCGCY 1 cut(s) 3130
HgaI GACGC 6 cut(s) 1367, 1731, 3543, 3622, 3724, 3803
HhaI GCGC 4 cut(s) 133, 525, 1252, 3129
Hin1I GRCGYC 5 cut(s) 3127, 3535, 3614, 3716, 3795
Hin6I GCGC 4 cut(s) 131, 523, 1250, 3127
HinP1I GCGC 4 cut(s) 131, 523, 1250, 3127
HincII GTYRAC 8 cut(s) 55, 160, 450, 859, 3533, 3612, 3714, 3793
HindII GTYRAC 8 cut(s) 55, 160, 450, 859, 3533, 3612, 3714, 3793
HindIII AAGCTT 7 cut(s) 838, 940, 1446, 1796, 2630, 3332, 3443
HpaI GTTAAC 1 cut(s) 55
HphI GGTGA 7 cut(s) 247, 294, 1216, 1745, 2864, 3466, 3688
Hpy99I CGWCG 6 cut(s) 101, 149, 3537, 3616, 3718, 3797
HpyCH4III ACNGT 6 cut(s) 97, 736, 910, 1386, 1669, 2902
HpyCH4IV ACGT 2 cut(s) 1209, 3082
HpySE526I ACGT 2 cut(s) 1209, 3082
Hsp92I GRCGYC 5 cut(s) 3127, 3535, 3614, 3716, 3795
HspAI GCGC 4 cut(s) 131, 523, 1250, 3127
KasI GGCGCC 1 cut(s) 3126
Kpn2I TCCGGA 5 cut(s) 9, 3542, 3621, 3723, 3802
KroI GCCGGC 1 cut(s) 22
KroNI GCCGGC 1 cut(s) 24
Ksp22I TGATCA 2 cut(s) 592, 843
KspAI GTTAAC 1 cut(s) 55
LguI GCTCTTC 2 cut(s) 35, 1046
LmnI GCTCC 3 cut(s) 104, 2469, 3195
LweI GCATC 5 cut(s) 409, 2659, 2798, 2954, 3178
MabI ACCWGGT 1 cut(s) 1897
MaeI CTAG 7 cut(s) 375, 1839, 2097, 2397, 2639, 2763, 3008
MaeII ACGT 2 cut(s) 1209, 3082
MaeIII GTNAC 8 cut(s) 258, 514, 1323, 1380, 1386, 1807, 2902, 3209
MfeI CAATTG 3 cut(s) 1242, 1728, 2552
MflI RGATCY 3 cut(s) 468, 764, 1659
MhlI GDGCHC 6 cut(s) 76, 480, 748, 1641, 1867, 2700
MlsI TGGCCA 1 cut(s) 3355
MluI ACGCGT 1 cut(s) 3345
MluNI TGGCCA 1 cut(s) 3355
Mly113I GGCGCC 1 cut(s) 3127
MlyI GAGTC 6 cut(s) 54, 403, 820, 1280, 1331, 3101
MmeI TCCRAC 1 cut(s) 648
Mox20I TGGCCA 1 cut(s) 3355
Mph1103I ATGCAT 1 cut(s) 2791
MreI CGCCGGCG 1 cut(s) 22
MroI TCCGGA 5 cut(s) 9, 3542, 3621, 3723, 3802
MroNI GCCGGC 1 cut(s) 22
MroXI GAANNNNTTC 1 cut(s) 1089
MscI TGGCCA 1 cut(s) 3355
MslI CAYNNNNRTG 1 cut(s) 2277
Msp20I TGGCCA 1 cut(s) 3355
MspA1I CMGCKG 2 cut(s) 371, 1829
MspR9I CCNGG 9 cut(s) 65, 115, 155, 1822, 1855, 1899, 2348, 2809, 3406
MunI CAATTG 3 cut(s) 1242, 1728, 2552
Mva1269I GAATGC 1 cut(s) 1121
MvaI CCWGG 7 cut(s) 65, 1822, 1855, 1899, 2348, 2809, 3406
MvnI CGCG 2 cut(s) 1252, 3347
NaeI GCCGGC 1 cut(s) 24
NarI GGCGCC 1 cut(s) 3127
NciI CCSGG 2 cut(s) 115, 155
NdeI CATATG 1 cut(s) 2248
NgoMIV GCCGGC 1 cut(s) 22
NlaIV GGNNCC 8 cut(s) 106, 1146, 2825, 3128, 3503, 3553, 3578, 3759
NmuCI GTSAC 5 cut(s) 1323, 1380, 1807, 2902, 3209
NsiI ATGCAT 1 cut(s) 2791
NspI RCATGY 1 cut(s) 3712
NspV TTCGAA 1 cut(s) 2036
PaeR7I CTCGAG 3 cut(s) 398, 473, 2042
PagI TCATGA 2 cut(s) 1035, 3139
PceI AGGCCT 1 cut(s) 2346
PciSI GCTCTTC 2 cut(s) 35, 1046
PcsI WCGNNNNNNNCGW 2 cut(s) 105, 471
PctI GAATGC 1 cut(s) 1121
PdiI GCCGGC 1 cut(s) 24
PdmI GAANNNNTTC 1 cut(s) 1089
PleI GAGTC 6 cut(s) 54, 402, 819, 1279, 1330, 3100
PluTI GGCGCC 1 cut(s) 3130
PpsI GAGTC 6 cut(s) 54, 402, 819, 1279, 1330, 3100
PpuMI RGGWCCY 5 cut(s) 1145, 3552, 3631, 3733, 3812
PsiI TTATAA 1 cut(s) 2369
Psp124BI GAGCTC 1 cut(s) 480
Psp1406I AACGTT 1 cut(s) 1209
Psp5II RGGWCCY 5 cut(s) 1145, 3552, 3631, 3733, 3812
Psp6I CCWGG 7 cut(s) 63, 1820, 1853, 1897, 2346, 2807, 3404
PspGI CCWGG 7 cut(s) 63, 1820, 1853, 1897, 2346, 2807, 3404
PspN4I GGNNCC 8 cut(s) 106, 1146, 2825, 3128, 3503, 3553, 3578, 3759
PspPPI RGGWCCY 5 cut(s) 1145, 3552, 3631, 3733, 3812
PspXI VCTCGAGB 2 cut(s) 473, 2042
PstNI CAGNNNCTG 2 cut(s) 2906, 3263
PsuI RGATCY 3 cut(s) 468, 764, 1659
PvuII CAGCTG 2 cut(s) 371, 1829
RsaI GTAC 6 cut(s) 270, 1354, 1576, 1988, 2123, 3158
RsaNI GTAC 6 cut(s) 269, 1353, 1575, 1987, 2122, 3157
RseI CAYNNNNRTG 1 cut(s) 2277
SacI GAGCTC 1 cut(s) 480
SalI GTCGAC 4 cut(s) 3531, 3610, 3712, 3791
SapI GCTCTTC 2 cut(s) 35, 1046
SchI GAGTC 6 cut(s) 54, 403, 820, 1280, 1331, 3101
ScrFI CCNGG 9 cut(s) 65, 115, 155, 1822, 1855, 1899, 2348, 2809, 3406
SduI GDGCHC 6 cut(s) 76, 480, 748, 1641, 1867, 2700
SexAI ACCWGGT 1 cut(s) 1897
SfaNI GCATC 5 cut(s) 409, 2659, 2798, 2954, 3178
SfcI CTRYAG 1 cut(s) 2802
SfoI GGCGCC 1 cut(s) 3128
Sfr274I CTCGAG 3 cut(s) 398, 473, 2042
SfuI TTCGAA 1 cut(s) 2036
SgrAI CRCCGGYG 1 cut(s) 22
SinI GGWCC 8 cut(s) 973, 1145, 3051, 3502, 3552, 3631, 3733, 3812
SlaI CTCGAG 3 cut(s) 398, 473, 2042
SmiMI CAYNNNNRTG 1 cut(s) 2277
SmlI CTYRAG 8 cut(s) 398, 473, 1319, 1498, 1630, 2042, 2691, 3463
SmoI CTYRAG 8 cut(s) 398, 473, 1319, 1498, 1630, 2042, 2691, 3463
SseBI AGGCCT 1 cut(s) 2346
SsiI CCGC 9 cut(s) 226, 256, 2298, 3054, 3379, 3584, 3663, 3765, 3844
SspDI GGCGCC 1 cut(s) 3126
SspI AATATT 2 cut(s) 676, 1534
SspMI CTAG 7 cut(s) 375, 1839, 2097, 2397, 2639, 2763, 3008
SstI GAGCTC 1 cut(s) 480
StuI AGGCCT 1 cut(s) 2346
StyD4I CCNGG 9 cut(s) 63, 113, 153, 1820, 1853, 1897, 2346, 2807, 3404
StyI CCWWGG 1 cut(s) 283
TaaI ACNGT 6 cut(s) 97, 736, 910, 1386, 1669, 2902
TaiI ACGT 2 cut(s) 1212, 3085
TatI WGTACW 2 cut(s) 268, 1352
TauI GCSGC 1 cut(s) 3381
TscAI CASTG 8 cut(s) 748, 801, 1053, 1389, 2380, 2911, 3660, 3841
TseFI GTSAC 5 cut(s) 1323, 1380, 1807, 2902, 3209
Tsp45I GTSAC 5 cut(s) 1323, 1380, 1807, 2902, 3209
TspGWI ACGGA 5 cut(s) 72, 545, 907, 1315, 2894
TspRI CASTG 8 cut(s) 748, 801, 1053, 1389, 2380, 2911, 3660, 3841
VneI GTGCAC 1 cut(s) 744
VpaK11BI GGWCC 8 cut(s) 973, 1145, 3051, 3502, 3552, 3631, 3733, 3812
XagI CCTNNNNNAGG 1 cut(s) 1199
XapI RAATTY 3 cut(s) 1509, 1690, 3073
XbaI TCTAGA 1 cut(s) 2762
XceI RCATGY 1 cut(s) 3712
XcmI CCANNNNNNNNNTGG 2 cut(s) 2903, 3348
XhoI CTCGAG 3 cut(s) 398, 473, 2042
XmiI GTMKAC 7 cut(s) 1020, 1238, 3469, 3532, 3611, 3713, 3792
XmnI GAANNNNTTC 1 cut(s) 1089
XspI CTAG 7 cut(s) 375, 1839, 2097, 2397, 2639, 2763, 3008
Zsp2I ATGCAT 1 cut(s) 2791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.