RRP12-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G34357 |
| fragaria_vesca | FvH4_1g09210 FvH4_6g18960 |
| malus_domestica | MD02G1098900.v1.1 MD02G1099100.v1.1 MD15G1221900.v1.1 |
| prunus_persica | Prupe.6G204300_v2.0.a1 Prupe.6G204300_v2.0.a1 Prupe.6G204500_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G193800_v2.0.a1 |
| pyrus_communis | pycom02g07730 pycom15g19640 |
| rosa_chinensis | RchiOBHm_Chr2g0095731 |
| rosa_laevigata | RLG00000016587 RLG00000016588 |
| rosa_multiflora | Rmu_sc0001309.1_g000002 Rmu_sc0001309.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00146140 |
| rosa_rugosa | Rorug02G0052900 |
| rosa_samantha | Rh2AG101100 Rh2BG102800 Rh2CG105200 Rh2DG102600 |
| rosa_wichuraiana | Rw2G007670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2654 |
| AccB1I | GGYRCC | 2 cut(s) | 200, 3411 |
| AccI | GTMKAC | 3 cut(s) | 1305, 1523, 3754 |
| AccII | CGCG | 7 cut(s) | 88, 106, 108, 206, 266, 1537, 3632 |
| AccIII | TCCGGA | 1 cut(s) | 294 |
| AclI | AACGTT | 1 cut(s) | 1494 |
| AclWI | GGATC | 2 cut(s) | 748, 1057 |
| AcoI | YGGCCR | 3 cut(s) | 288, 3193, 3638 |
| AcsI | RAATTY | 3 cut(s) | 1794, 1975, 3358 |
| AcuI | CTGAAG | 4 cut(s) | 1355, 1494, 1745, 2819 |
| AcyI | GRCGYC | 3 cut(s) | 60, 201, 3412 |
| AfaI | GTAC | 7 cut(s) | 555, 1639, 1861, 2071, 2273, 2408, 3443 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 399, 517, 779, 1411, 1486, 2145, 3006, 3696, 3796 |
| AflIII | ACRYGT | 1 cut(s) | 3630 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2710 |
| AjnI | CCWGG | 8 cut(s) | 150, 348, 2105, 2138, 2182, 2631, 3092, 3689 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1215, 1247 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 336, 368 |
| Alw21I | GWGCWC | 5 cut(s) | 212, 361, 765, 1033, 2985 |
| Alw26I | GTCTC | 9 cut(s) | 186, 219, 307, 400, 686, 842, 910, 2432, 3462 |
| Alw44I | GTGCAC | 1 cut(s) | 1029 |
| AlwI | GGATC | 2 cut(s) | 748, 1057 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3191, 3548 |
| Ama87I | CYCGRG | 3 cut(s) | 683, 758, 2327 |
| Aor13HI | TCCGGA | 1 cut(s) | 294 |
| ApaLI | GTGCAC | 1 cut(s) | 1029 |
| ApoI | RAATTY | 3 cut(s) | 1794, 1975, 3358 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 336, 368 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1374 |
| AspLEI | GCGC | 9 cut(s) | 90, 108, 131, 203, 268, 418, 810, 1537, 3414 |
| AsuC2I | CCSGG | 2 cut(s) | 400, 440 |
| AsuHPI | GGTGA | 6 cut(s) | 532, 579, 1501, 2030, 3149, 3751 |
| AsuII | TTCGAA | 1 cut(s) | 2321 |
| AvaI | CYCGRG | 3 cut(s) | 683, 758, 2327 |
| AvaII | GGWCC | 5 cut(s) | 112, 1258, 1430, 3336, 3787 |
| AxyI | CCTNAGG | 2 cut(s) | 516, 1896 |
| BaeGI | GKGCMC | 2 cut(s) | 1033, 2152 |
| BalI | TGGCCA | 1 cut(s) | 3640 |
| BanI | GGYRCC | 2 cut(s) | 200, 3411 |
| BanII | GRGCYC | 2 cut(s) | 246, 765 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2241, 2255, 2273, 2287 |
| BauI | CACGAG | 1 cut(s) | 317 |
| BbsI | GAAGAC | 4 cut(s) | 1482, 1960, 3303, 3542 |
| Bbv12I | GWGCWC | 5 cut(s) | 212, 361, 765, 1033, 2985 |
| BbvCI | CCTCAGC | 1 cut(s) | 2826 |
| BccI | CCATC | 8 cut(s) | 812, 1985, 2300, 2341, 2743, 3099, 3401, 3546 |
| BceAI | ACGGC | 7 cut(s) | 116, 275, 377, 960, 1428, 2402, 3439 |
| BciT130I | CCWGG | 8 cut(s) | 152, 350, 2107, 2140, 2184, 2633, 3094, 3691 |
| BciVI | GTATCC | 1 cut(s) | 1229 |
| BclI | TGATCA | 2 cut(s) | 877, 1128 |
| BcnI | CCSGG | 2 cut(s) | 400, 440 |
| BcoDI | GTCTC | 9 cut(s) | 186, 219, 307, 400, 686, 842, 910, 2432, 3462 |
| BfaI | CTAG | 7 cut(s) | 660, 2124, 2382, 2682, 2924, 3048, 3293 |
| BfmI | CTRYAG | 1 cut(s) | 3087 |
| BfoI | RGCGCY | 2 cut(s) | 204, 3415 |
| BfuI | GTATCC | 1 cut(s) | 1229 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2637, 3201 |
| BglII | AGATCT | 1 cut(s) | 1944 |
| BlpI | GCTNAGC | 2 cut(s) | 2677, 3098 |
| BmcAI | AGTACT | 1 cut(s) | 2071 |
| Bme18I | GGWCC | 5 cut(s) | 112, 1258, 1430, 3336, 3787 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2710 |
| BmeT110I | CYCGRG | 3 cut(s) | 683, 758, 2327 |
| BmiI | GGNNCC | 8 cut(s) | 202, 237, 243, 391, 1431, 3110, 3413, 3788 |
| BmsI | GCATC | 5 cut(s) | 694, 2944, 3083, 3239, 3463 |
| BpiI | GAAGAC | 4 cut(s) | 1482, 1960, 3303, 3542 |
| BpmI | CTGGAG | 2 cut(s) | 2646, 2738 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2826 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2677, 3098 |
| Bpu14I | TTCGAA | 1 cut(s) | 2321 |
| BpuEI | CTTGAG | 5 cut(s) | 1625, 1804, 1936, 2961, 3733 |
| BpuMI | CCSGG | 2 cut(s) | 400, 440 |
| BsaAI | YACGTR | 1 cut(s) | 548 |
| BsaHI | GRCGYC | 3 cut(s) | 60, 201, 3412 |
| BsaJI | CCNNGG | 6 cut(s) | 150, 151, 285, 568, 1405, 2106 |
| BsaWI | WCCGGW | 3 cut(s) | 184, 248, 294 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 399, 517, 779, 1411, 1486, 2145, 3006, 3696, 3796 |
| Bse118I | RCCGGY | 3 cut(s) | 307, 589, 3195 |
| Bse1I | ACTGG | 4 cut(s) | 461, 3196, 3568, 3762 |
| Bse21I | CCTNAGG | 2 cut(s) | 516, 1896 |
| Bse3DI | GCAATG | 2 cut(s) | 2673, 3574 |
| BseAI | TCCGGA | 1 cut(s) | 294 |
| BseBI | CCWGG | 8 cut(s) | 152, 350, 2107, 2140, 2184, 2633, 3094, 3691 |
| BseDI | CCNNGG | 6 cut(s) | 150, 151, 285, 568, 1405, 2106 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 399, 517, 779, 1411, 1486, 2145, 3006, 3696, 3796 |
| BseMI | GCAATG | 2 cut(s) | 2673, 3574 |
| BseMII | CTCAG | 7 cut(s) | 482, 878, 1044, 1698, 1752, 1910, 2817 |
| BseNI | ACTGG | 4 cut(s) | 461, 3196, 3568, 3762 |
| BseRI | GAGGAG | 4 cut(s) | 260, 852, 2588, 2741 |
| BseSI | GKGCMC | 2 cut(s) | 1033, 2152 |
| BsgI | GTGCAG | 2 cut(s) | 55, 566 |
| Bsh1236I | CGCG | 7 cut(s) | 88, 106, 108, 206, 266, 1537, 3632 |
| Bsh1285I | CGRYCG | 2 cut(s) | 189, 223 |
| BshNI | GGYRCC | 2 cut(s) | 200, 3411 |
| BsiEI | CGRYCG | 2 cut(s) | 189, 223 |
| BsiHKAI | GWGCWC | 5 cut(s) | 212, 361, 765, 1033, 2985 |
| BsiHKCI | CYCGRG | 3 cut(s) | 683, 758, 2327 |
| BslFI | GGGAC | 5 cut(s) | 586, 795, 1342, 1443, 2312 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 399, 517, 779, 1411, 1486, 2145, 3006, 3696, 3796 |
| BsmAI | GTCTC | 9 cut(s) | 186, 219, 307, 400, 686, 842, 910, 2432, 3462 |
| BsmBI | CGTCTC | 4 cut(s) | 186, 219, 400, 3462 |
| BsmFI | GGGAC | 5 cut(s) | 586, 795, 1342, 1443, 2312 |
| BsmI | GAATGC | 1 cut(s) | 1406 |
| BsoBI | CYCGRG | 3 cut(s) | 683, 758, 2327 |
| Bsp119I | TTCGAA | 1 cut(s) | 2321 |
| Bsp1286I | GDGCHC | 7 cut(s) | 212, 246, 361, 765, 1033, 2152, 2985 |
| Bsp13I | TCCGGA | 1 cut(s) | 294 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2677, 3098 |
| Bsp19I | CCATGG | 1 cut(s) | 285 |
| BspCNI | CTCAG | 7 cut(s) | 483, 877, 1045, 1699, 1753, 1909, 2818 |
| BspEI | TCCGGA | 1 cut(s) | 294 |
| BspFNI | CGCG | 7 cut(s) | 88, 106, 108, 206, 266, 1537, 3632 |
| BspHI | TCATGA | 2 cut(s) | 1320, 3424 |
| BspLI | GGNNCC | 8 cut(s) | 202, 237, 243, 391, 1431, 3110, 3413, 3788 |
| BspPI | GGATC | 2 cut(s) | 748, 1057 |
| BspQI | GCTCTTC | 3 cut(s) | 15, 320, 1331 |
| BspT104I | TTCGAA | 1 cut(s) | 2321 |
| BspT107I | GGYRCC | 2 cut(s) | 200, 3411 |
| BsrDI | GCAATG | 2 cut(s) | 2673, 3574 |
| BsrFI | RCCGGY | 3 cut(s) | 307, 589, 3195 |
| BsrI | ACTGG | 4 cut(s) | 461, 3196, 3568, 3762 |
| BssAI | RCCGGY | 3 cut(s) | 307, 589, 3195 |
| BssECI | CCNNGG | 6 cut(s) | 150, 151, 285, 568, 1405, 2106 |
| BssNAI | GTATAC | 3 cut(s) | 1306, 1524, 3755 |
| BssNI | GRCGYC | 3 cut(s) | 60, 201, 3412 |
| BssSI | CACGAG | 1 cut(s) | 317 |
| BssT1I | CCWWGG | 2 cut(s) | 285, 568 |
| Bst1107I | GTATAC | 3 cut(s) | 1306, 1524, 3755 |
| Bst2BI | CACGAG | 1 cut(s) | 317 |
| Bst2UI | CCWGG | 8 cut(s) | 152, 350, 2107, 2140, 2184, 2633, 3094, 3691 |
| Bst4CI | ACNGT | 6 cut(s) | 382, 1021, 1195, 1671, 1954, 3187 |
| Bst6I | CTCTTC | 7 cut(s) | 15, 320, 1056, 1315, 1331, 2323, 3734 |
| BstACI | GRCGYC | 3 cut(s) | 60, 201, 3412 |
| BstBAI | YACGTR | 1 cut(s) | 548 |
| BstBI | TTCGAA | 1 cut(s) | 2321 |
| BstDSI | CCRYGG | 1 cut(s) | 285 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1484 |
| BstFNI | CGCG | 7 cut(s) | 88, 106, 108, 206, 266, 1537, 3632 |
| BstH2I | RGCGCY | 2 cut(s) | 204, 3415 |
| BstHHI | GCGC | 9 cut(s) | 90, 108, 131, 203, 268, 418, 810, 1537, 3414 |
| BstMAI | GTCTC | 9 cut(s) | 186, 219, 307, 400, 686, 842, 910, 2432, 3462 |
| BstMCI | CGRYCG | 2 cut(s) | 189, 223 |
| BstNI | CCWGG | 8 cut(s) | 152, 350, 2107, 2140, 2184, 2633, 3094, 3691 |
| BstNSI | RCATGY | 1 cut(s) | 1924 |
| BstSFI | CTRYAG | 1 cut(s) | 3087 |
| BstSLI | GKGCMC | 2 cut(s) | 1033, 2152 |
| BstUI | CGCG | 7 cut(s) | 88, 106, 108, 206, 266, 1537, 3632 |
| BstV2I | GAAGAC | 4 cut(s) | 1482, 1960, 3303, 3542 |
| BstX2I | RGATCY | 3 cut(s) | 753, 1049, 1944 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 16 |
| BstYI | RGATCY | 3 cut(s) | 753, 1049, 1944 |
| BstZ17I | GTATAC | 3 cut(s) | 1306, 1524, 3755 |
| Bsu36I | CCTNAGG | 2 cut(s) | 516, 1896 |
| BsuI | GTATCC | 1 cut(s) | 1229 |
| BtgI | CCRYGG | 1 cut(s) | 285 |
| BtgZI | GCGATG | 1 cut(s) | 1298 |
| BtsI | GCAGTG | 1 cut(s) | 1086 |
| BtsIMutI | CAGTG | 6 cut(s) | 1033, 1086, 1331, 1667, 2665, 3189 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3191, 3548 |
| CciI | TCATGA | 2 cut(s) | 1320, 3424 |
| CfoI | GCGC | 9 cut(s) | 90, 108, 131, 203, 268, 418, 810, 1537, 3414 |
| Cfr10I | RCCGGY | 3 cut(s) | 307, 589, 3195 |
| CseI | GACGC | 5 cut(s) | 68, 272, 1626, 1652, 2016 |
| CsiI | ACCWGGT | 1 cut(s) | 2182 |
| Csp6I | GTAC | 7 cut(s) | 554, 1638, 1860, 2070, 2272, 2407, 3442 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2926, 2961 |
| CviQI | GTAC | 7 cut(s) | 554, 1638, 1860, 2070, 2272, 2407, 3442 |
| DinI | GGCGCC | 2 cut(s) | 202, 3413 |
| DraI | TTTAAA | 5 cut(s) | 712, 769, 2190, 3363, 3781 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2710 |
| EaeI | YGGCCR | 3 cut(s) | 288, 3193, 3638 |
| Eam1104I | CTCTTC | 7 cut(s) | 15, 320, 1056, 1315, 1331, 2323, 3734 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2710 |
| EarI | CTCTTC | 7 cut(s) | 15, 320, 1056, 1315, 1331, 2323, 3734 |
| Ecl136II | GAGCTC | 1 cut(s) | 763 |
| Eco130I | CCWWGG | 2 cut(s) | 285, 568 |
| Eco147I | AGGCCT | 1 cut(s) | 2631 |
| Eco24I | GRGCYC | 2 cut(s) | 246, 765 |
| Eco32I | GATATC | 2 cut(s) | 2539, 3702 |
| Eco47I | GGWCC | 5 cut(s) | 112, 1258, 1430, 3336, 3787 |
| Eco53kI | GAGCTC | 1 cut(s) | 763 |
| Eco57I | CTGAAG | 4 cut(s) | 1355, 1494, 1745, 2819 |
| Eco81I | CCTNAGG | 2 cut(s) | 516, 1896 |
| Eco88I | CYCGRG | 3 cut(s) | 683, 758, 2327 |
| EcoICRI | GAGCTC | 1 cut(s) | 763 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1484 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1430 |
| EcoRI | GAATTC | 1 cut(s) | 1975 |
| EcoRII | CCWGG | 8 cut(s) | 150, 348, 2105, 2138, 2182, 2631, 3092, 3689 |
| EcoRV | GATATC | 2 cut(s) | 2539, 3702 |
| EcoT14I | CCWWGG | 2 cut(s) | 285, 568 |
| EcoT22I | ATGCAT | 1 cut(s) | 3076 |
| EcoT38I | GRGCYC | 2 cut(s) | 246, 765 |
| EgeI | GGCGCC | 2 cut(s) | 202, 3413 |
| EheI | GGCGCC | 2 cut(s) | 202, 3413 |
| ErhI | CCWWGG | 2 cut(s) | 285, 568 |
| Esp3I | CGTCTC | 4 cut(s) | 186, 219, 400, 3462 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 705, 737 |
| FaqI | GGGAC | 5 cut(s) | 586, 795, 1342, 1443, 2312 |
| FauI | CCCGC | 2 cut(s) | 518, 2576 |
| FauNDI | CATATG | 1 cut(s) | 2533 |
| FbaI | TGATCA | 2 cut(s) | 877, 1128 |
| FblI | GTMKAC | 3 cut(s) | 1305, 1523, 3754 |
| FriOI | GRGCYC | 2 cut(s) | 246, 765 |
| FspBI | CTAG | 7 cut(s) | 660, 2124, 2382, 2682, 2924, 3048, 3293 |
| GlaI | GCGC | 9 cut(s) | 89, 107, 130, 202, 267, 417, 809, 1536, 3413 |
| GsuI | CTGGAG | 2 cut(s) | 2646, 2738 |
| HaeII | RGCGCY | 2 cut(s) | 204, 3415 |
| HgaI | GACGC | 5 cut(s) | 68, 272, 1626, 1652, 2016 |
| HhaI | GCGC | 9 cut(s) | 90, 108, 131, 203, 268, 418, 810, 1537, 3414 |
| Hin1I | GRCGYC | 3 cut(s) | 60, 201, 3412 |
| Hin6I | GCGC | 9 cut(s) | 88, 106, 129, 201, 266, 416, 808, 1535, 3412 |
| HinP1I | GCGC | 9 cut(s) | 88, 106, 129, 201, 266, 416, 808, 1535, 3412 |
| HincII | GTYRAC | 4 cut(s) | 340, 445, 735, 1144 |
| HindII | GTYRAC | 4 cut(s) | 340, 445, 735, 1144 |
| HindIII | AAGCTT | 7 cut(s) | 1123, 1225, 1731, 2081, 2915, 3617, 3728 |
| HpaI | GTTAAC | 1 cut(s) | 340 |
| HphI | GGTGA | 6 cut(s) | 532, 579, 1501, 2030, 3149, 3751 |
| Hpy99I | CGWCG | 4 cut(s) | 62, 266, 386, 434 |
| HpyCH4III | ACNGT | 6 cut(s) | 382, 1021, 1195, 1671, 1954, 3187 |
| HpyCH4IV | ACGT | 3 cut(s) | 547, 1494, 3367 |
| HpySE526I | ACGT | 3 cut(s) | 547, 1494, 3367 |
| Hsp92I | GRCGYC | 3 cut(s) | 60, 201, 3412 |
| HspAI | GCGC | 9 cut(s) | 88, 106, 129, 201, 266, 416, 808, 1535, 3412 |
| KasI | GGCGCC | 2 cut(s) | 200, 3411 |
| Kpn2I | TCCGGA | 1 cut(s) | 294 |
| KroI | GCCGGC | 2 cut(s) | 307, 3195 |
| KroNI | GCCGGC | 2 cut(s) | 309, 3197 |
| Ksp22I | TGATCA | 2 cut(s) | 877, 1128 |
| KspAI | GTTAAC | 1 cut(s) | 340 |
| LguI | GCTCTTC | 3 cut(s) | 15, 320, 1331 |
| LmnI | GCTCC | 6 cut(s) | 235, 241, 273, 389, 2754, 3480 |
| LweI | GCATC | 5 cut(s) | 694, 2944, 3083, 3239, 3463 |
| MabI | ACCWGGT | 1 cut(s) | 2182 |
| MaeI | CTAG | 7 cut(s) | 660, 2124, 2382, 2682, 2924, 3048, 3293 |
| MaeII | ACGT | 3 cut(s) | 547, 1494, 3367 |
| MaeIII | GTNAC | 9 cut(s) | 251, 543, 799, 1608, 1665, 1671, 2092, 3187, 3494 |
| MfeI | CAATTG | 3 cut(s) | 1527, 2013, 2837 |
| MflI | RGATCY | 3 cut(s) | 753, 1049, 1944 |
| MhlI | GDGCHC | 7 cut(s) | 212, 246, 361, 765, 1033, 2152, 2985 |
| MlsI | TGGCCA | 1 cut(s) | 3640 |
| MluI | ACGCGT | 1 cut(s) | 3630 |
| MluNI | TGGCCA | 1 cut(s) | 3640 |
| Mly113I | GGCGCC | 2 cut(s) | 201, 3412 |
| MlyI | GAGTC | 6 cut(s) | 339, 688, 1105, 1565, 1616, 3386 |
| MmeI | TCCRAC | 1 cut(s) | 933 |
| Mox20I | TGGCCA | 1 cut(s) | 3640 |
| Mph1103I | ATGCAT | 1 cut(s) | 3076 |
| MreI | CGCCGGCG | 1 cut(s) | 307 |
| MroI | TCCGGA | 1 cut(s) | 294 |
| MroNI | GCCGGC | 2 cut(s) | 307, 3195 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1374 |
| MscI | TGGCCA | 1 cut(s) | 3640 |
| MslI | CAYNNNNRTG | 2 cut(s) | 14, 2562 |
| Msp20I | TGGCCA | 1 cut(s) | 3640 |
| MspA1I | CMGCKG | 2 cut(s) | 656, 2114 |
| MunI | CAATTG | 3 cut(s) | 1527, 2013, 2837 |
| Mva1269I | GAATGC | 1 cut(s) | 1406 |
| MvaI | CCWGG | 8 cut(s) | 152, 350, 2107, 2140, 2184, 2633, 3094, 3691 |
| MvnI | CGCG | 7 cut(s) | 88, 106, 108, 206, 266, 1537, 3632 |
| NaeI | GCCGGC | 2 cut(s) | 309, 3197 |
| NarI | GGCGCC | 2 cut(s) | 201, 3412 |
| NciI | CCSGG | 2 cut(s) | 400, 440 |
| NcoI | CCATGG | 1 cut(s) | 285 |
| NdeI | CATATG | 1 cut(s) | 2533 |
| NgoMIV | GCCGGC | 2 cut(s) | 307, 3195 |
| NlaIV | GGNNCC | 8 cut(s) | 202, 237, 243, 391, 1431, 3110, 3413, 3788 |
| NmuCI | GTSAC | 6 cut(s) | 251, 1608, 1665, 2092, 3187, 3494 |
| NsiI | ATGCAT | 1 cut(s) | 3076 |
| NspI | RCATGY | 1 cut(s) | 1924 |
| NspV | TTCGAA | 1 cut(s) | 2321 |
| PaeI | GCATGC | 1 cut(s) | 1924 |
| PaeR7I | CTCGAG | 3 cut(s) | 683, 758, 2327 |
| PagI | TCATGA | 2 cut(s) | 1320, 3424 |
| PasI | CCCWGGG | 1 cut(s) | 151 |
| PceI | AGGCCT | 1 cut(s) | 2631 |
| PciSI | GCTCTTC | 3 cut(s) | 15, 320, 1331 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 390, 756 |
| PctI | GAATGC | 1 cut(s) | 1406 |
| PdiI | GCCGGC | 2 cut(s) | 309, 3197 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1374 |
| PfeI | GAWTC | 8 cut(s) | 225, 313, 506, 1765, 2129, 3176, 3467, 3545 |
| Ple19I | CGATCG | 1 cut(s) | 223 |
| PleI | GAGTC | 6 cut(s) | 339, 687, 1104, 1564, 1615, 3385 |
| PluTI | GGCGCC | 2 cut(s) | 204, 3415 |
| PpsI | GAGTC | 6 cut(s) | 339, 687, 1104, 1564, 1615, 3385 |
| Ppu21I | YACGTR | 1 cut(s) | 548 |
| PpuMI | RGGWCCY | 1 cut(s) | 1430 |
| PsiI | TTATAA | 1 cut(s) | 2654 |
| Psp124BI | GAGCTC | 1 cut(s) | 765 |
| Psp1406I | AACGTT | 1 cut(s) | 1494 |
| Psp5II | RGGWCCY | 1 cut(s) | 1430 |
| Psp6I | CCWGG | 8 cut(s) | 150, 348, 2105, 2138, 2182, 2631, 3092, 3689 |
| PspGI | CCWGG | 8 cut(s) | 150, 348, 2105, 2138, 2182, 2631, 3092, 3689 |
| PspN4I | GGNNCC | 8 cut(s) | 202, 237, 243, 391, 1431, 3110, 3413, 3788 |
| PspPPI | RGGWCCY | 1 cut(s) | 1430 |
| PspXI | VCTCGAGB | 2 cut(s) | 758, 2327 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3191, 3548 |
| PsuI | RGATCY | 3 cut(s) | 753, 1049, 1944 |
| PvuI | CGATCG | 1 cut(s) | 223 |
| PvuII | CAGCTG | 2 cut(s) | 656, 2114 |
| RsaI | GTAC | 7 cut(s) | 555, 1639, 1861, 2071, 2273, 2408, 3443 |
| RsaNI | GTAC | 7 cut(s) | 554, 1638, 1860, 2070, 2272, 2407, 3442 |
| RseI | CAYNNNNRTG | 2 cut(s) | 14, 2562 |
| SacI | GAGCTC | 1 cut(s) | 765 |
| SapI | GCTCTTC | 3 cut(s) | 15, 320, 1331 |
| ScaI | AGTACT | 1 cut(s) | 2071 |
| SchI | GAGTC | 6 cut(s) | 339, 688, 1105, 1565, 1616, 3386 |
| SduI | GDGCHC | 7 cut(s) | 212, 246, 361, 765, 1033, 2152, 2985 |
| SexAI | ACCWGGT | 1 cut(s) | 2182 |
| SfaNI | GCATC | 5 cut(s) | 694, 2944, 3083, 3239, 3463 |
| SfcI | CTRYAG | 1 cut(s) | 3087 |
| SfoI | GGCGCC | 2 cut(s) | 202, 3413 |
| Sfr274I | CTCGAG | 3 cut(s) | 683, 758, 2327 |
| SfuI | TTCGAA | 1 cut(s) | 2321 |
| SgrAI | CRCCGGYG | 1 cut(s) | 307 |
| SinI | GGWCC | 5 cut(s) | 112, 1258, 1430, 3336, 3787 |
| SlaI | CTCGAG | 3 cut(s) | 683, 758, 2327 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 14, 2562 |
| SmlI | CTYRAG | 8 cut(s) | 683, 758, 1604, 1783, 1915, 2327, 2976, 3748 |
| SmoI | CTYRAG | 8 cut(s) | 683, 758, 1604, 1783, 1915, 2327, 2976, 3748 |
| SphI | GCATGC | 1 cut(s) | 1924 |
| SseBI | AGGCCT | 1 cut(s) | 2631 |
| SspDI | GGCGCC | 2 cut(s) | 200, 3411 |
| SspI | AATATT | 3 cut(s) | 961, 1512, 1819 |
| SspMI | CTAG | 7 cut(s) | 660, 2124, 2382, 2682, 2924, 3048, 3293 |
| SstI | GAGCTC | 1 cut(s) | 765 |
| StuI | AGGCCT | 1 cut(s) | 2631 |
| StyI | CCWWGG | 2 cut(s) | 285, 568 |
| TaaI | ACNGT | 6 cut(s) | 382, 1021, 1195, 1671, 1954, 3187 |
| TaiI | ACGT | 3 cut(s) | 550, 1497, 3370 |
| TatI | WGTACW | 3 cut(s) | 553, 1637, 2069 |
| TauI | GCSGC | 5 cut(s) | 28, 31, 144, 206, 3666 |
| TfiI | GAWTC | 8 cut(s) | 225, 313, 506, 1765, 2129, 3176, 3467, 3545 |
| TscAI | CASTG | 6 cut(s) | 1033, 1086, 1338, 1674, 2665, 3196 |
| TseFI | GTSAC | 6 cut(s) | 251, 1608, 1665, 2092, 3187, 3494 |
| Tsp45I | GTSAC | 6 cut(s) | 251, 1608, 1665, 2092, 3187, 3494 |
| TspGWI | ACGGA | 6 cut(s) | 168, 357, 830, 1192, 1600, 3179 |
| TspRI | CASTG | 6 cut(s) | 1033, 1086, 1338, 1674, 2665, 3196 |
| VneI | GTGCAC | 1 cut(s) | 1029 |
| VpaK11BI | GGWCC | 5 cut(s) | 112, 1258, 1430, 3336, 3787 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1484 |
| XapI | RAATTY | 3 cut(s) | 1794, 1975, 3358 |
| XbaI | TCTAGA | 1 cut(s) | 3047 |
| XceI | RCATGY | 1 cut(s) | 1924 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 3188, 3633 |
| XhoI | CTCGAG | 3 cut(s) | 683, 758, 2327 |
| XmiI | GTMKAC | 3 cut(s) | 1305, 1523, 3754 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1374 |
| XspI | CTAG | 7 cut(s) | 660, 2124, 2382, 2682, 2924, 3048, 3293 |
| ZrmI | AGTACT | 1 cut(s) | 2071 |
| Zsp2I | ATGCAT | 1 cut(s) | 3076 |