RRP12-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G34357 |
| fragaria_vesca | FvH4_1g09210 FvH4_6g18960 |
| malus_domestica | MD02G1098900.v1.1 MD02G1099100.v1.1 MD15G1221900.v1.1 |
| prunus_persica | Prupe.6G204300_v2.0.a1 Prupe.6G204300_v2.0.a1 Prupe.6G204500_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G193800_v2.0.a1 |
| pyrus_communis | pycom02g07730 pycom15g19640 |
| rosa_chinensis | RchiOBHm_Chr2g0095731 |
| rosa_laevigata | RLG00000016587 RLG00000016588 |
| rosa_multiflora | Rmu_sc0001309.1_g000002 Rmu_sc0001309.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00146140 |
| rosa_rugosa | Rorug02G0052900 |
| rosa_samantha | Rh2AG101100 Rh2BG102800 Rh2CG105200 Rh2DG102600 |
| rosa_wichuraiana | Rw2G007670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2666 |
| AarI | CACCTGC | 1 cut(s) | 50 |
| Acc36I | ACCTGC | 1 cut(s) | 50 |
| AccI | GTMKAC | 4 cut(s) | 746, 1317, 1535, 3766 |
| AccIII | TCCGGA | 1 cut(s) | 306 |
| AciI | CCGC | 9 cut(s) | 26, 29, 51, 153, 215, 523, 553, 2595, 3676 |
| AclI | AACGTT | 1 cut(s) | 2753 |
| AclWI | GGATC | 1 cut(s) | 760 |
| AcoI | YGGCCR | 4 cut(s) | 300, 2566, 3205, 3650 |
| AcsI | RAATTY | 3 cut(s) | 1806, 1987, 3370 |
| AcuI | CTGAAG | 3 cut(s) | 1367, 1757, 2831 |
| AcyI | GRCGYC | 2 cut(s) | 66, 72 |
| AfaI | GTAC | 5 cut(s) | 567, 1256, 1651, 1873, 2420 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 411, 529, 791, 1498, 2157, 3018, 3399, 3708, 3808 |
| AflIII | ACRYGT | 1 cut(s) | 3642 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2722 |
| AhlI | ACTAGT | 1 cut(s) | 3773 |
| AjnI | CCWGG | 7 cut(s) | 162, 360, 2117, 2194, 2643, 3104, 3701 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1227, 1259 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 348, 380 |
| Alw21I | GWGCWC | 7 cut(s) | 224, 373, 777, 1045, 1549, 1938, 2997 |
| Alw26I | GTCTC | 9 cut(s) | 198, 231, 319, 412, 698, 854, 922, 2444, 3519 |
| Alw44I | GTGCAC | 2 cut(s) | 1041, 1545 |
| AlwI | GGATC | 1 cut(s) | 760 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3203, 3560 |
| Ama87I | CYCGRG | 3 cut(s) | 695, 770, 2339 |
| Aor13HI | TCCGGA | 1 cut(s) | 306 |
| ApaLI | GTGCAC | 2 cut(s) | 1041, 1545 |
| ApoI | RAATTY | 3 cut(s) | 1806, 1987, 3370 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 348, 380, 3278, 3310 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2282 |
| AspS9I | GGNCC | 9 cut(s) | 124, 160, 680, 1199, 1270, 1442, 3255, 3401, 3799 |
| AsuC2I | CCSGG | 2 cut(s) | 412, 452 |
| AsuHPI | GGTGA | 5 cut(s) | 544, 591, 1603, 2042, 3161 |
| AsuII | TTCGAA | 1 cut(s) | 2333 |
| AvaI | CYCGRG | 3 cut(s) | 695, 770, 2339 |
| AvaII | GGWCC | 4 cut(s) | 124, 1270, 1442, 3799 |
| AxyI | CCTNAGG | 2 cut(s) | 528, 1908 |
| BaeGI | GKGCMC | 3 cut(s) | 1045, 1549, 2164 |
| BalI | TGGCCA | 2 cut(s) | 2568, 3652 |
| BanII | GRGCYC | 2 cut(s) | 258, 777 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2253, 2285 |
| BauI | CACGAG | 1 cut(s) | 329 |
| BbsI | GAAGAC | 4 cut(s) | 1972, 2718, 3315, 3554 |
| Bbv12I | GWGCWC | 7 cut(s) | 224, 373, 777, 1045, 1549, 1938, 2997 |
| BbvCI | CCTCAGC | 1 cut(s) | 2838 |
| BceAI | ACGGC | 6 cut(s) | 128, 287, 389, 972, 2414, 3472 |
| BciT130I | CCWGG | 7 cut(s) | 164, 362, 2119, 2196, 2645, 3106, 3703 |
| BclI | TGATCA | 3 cut(s) | 889, 1140, 3298 |
| BcnI | CCSGG | 2 cut(s) | 412, 452 |
| BcoDI | GTCTC | 9 cut(s) | 198, 231, 319, 412, 698, 854, 922, 2444, 3519 |
| BcuI | ACTAGT | 1 cut(s) | 3773 |
| BfaI | CTAG | 9 cut(s) | 672, 2136, 2394, 2555, 2694, 2936, 3060, 3305, 3774 |
| BfmI | CTRYAG | 1 cut(s) | 3099 |
| BfuAI | ACCTGC | 1 cut(s) | 50 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2649, 3213 |
| BglII | AGATCT | 2 cut(s) | 1604, 1956 |
| BlpI | GCTNAGC | 2 cut(s) | 2689, 3110 |
| Bme1390I | CCNGG | 9 cut(s) | 164, 362, 412, 452, 2119, 2196, 2645, 3106, 3703 |
| Bme18I | GGWCC | 4 cut(s) | 124, 1270, 1442, 3799 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2722 |
| BmeT110I | CYCGRG | 3 cut(s) | 695, 770, 2339 |
| BmgT120I | GGNCC | 9 cut(s) | 124, 160, 680, 1199, 1270, 1442, 3255, 3401, 3799 |
| BmiI | GGNNCC | 6 cut(s) | 249, 255, 403, 1443, 3122, 3800 |
| BmrFI | CCNGG | 9 cut(s) | 164, 362, 412, 452, 2119, 2196, 2645, 3106, 3703 |
| BmsI | GCATC | 5 cut(s) | 706, 2956, 3095, 3251, 3475 |
| BpiI | GAAGAC | 4 cut(s) | 1972, 2718, 3315, 3554 |
| BpmI | CTGGAG | 2 cut(s) | 2658, 2750 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2838 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2689, 3110 |
| Bpu14I | TTCGAA | 1 cut(s) | 2333 |
| BpuEI | CTTGAG | 4 cut(s) | 1637, 1816, 1948, 3745 |
| BpuMI | CCSGG | 2 cut(s) | 412, 452 |
| BsaHI | GRCGYC | 2 cut(s) | 66, 72 |
| BsaJI | CCNNGG | 6 cut(s) | 162, 163, 297, 580, 1417, 2118 |
| BsaWI | WCCGGW | 3 cut(s) | 196, 260, 306 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 411, 529, 791, 1498, 2157, 3018, 3399, 3708, 3808 |
| Bse118I | RCCGGY | 2 cut(s) | 601, 3207 |
| Bse1I | ACTGG | 4 cut(s) | 473, 1252, 3208, 3580 |
| Bse21I | CCTNAGG | 2 cut(s) | 528, 1908 |
| Bse3DI | GCAATG | 3 cut(s) | 1443, 2685, 3586 |
| BseAI | TCCGGA | 1 cut(s) | 306 |
| BseBI | CCWGG | 7 cut(s) | 164, 362, 2119, 2196, 2645, 3106, 3703 |
| BseDI | CCNNGG | 6 cut(s) | 162, 163, 297, 580, 1417, 2118 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 411, 529, 791, 1498, 2157, 3018, 3399, 3708, 3808 |
| BseMI | GCAATG | 3 cut(s) | 1443, 2685, 3586 |
| BseMII | CTCAG | 8 cut(s) | 494, 497, 890, 1056, 1710, 1764, 1922, 2829 |
| BseNI | ACTGG | 4 cut(s) | 473, 1252, 3208, 3580 |
| BsePI | GCGCGC | 2 cut(s) | 1947, 1949 |
| BseRI | GAGGAG | 4 cut(s) | 272, 864, 2600, 2753 |
| BseSI | GKGCMC | 3 cut(s) | 1045, 1549, 2164 |
| BsgI | GTGCAG | 4 cut(s) | 28, 67, 578, 3336 |
| Bsh1285I | CGRYCG | 2 cut(s) | 201, 235 |
| BsiEI | CGRYCG | 2 cut(s) | 201, 235 |
| BsiHKAI | GWGCWC | 7 cut(s) | 224, 373, 777, 1045, 1549, 1938, 2997 |
| BsiHKCI | CYCGRG | 3 cut(s) | 695, 770, 2339 |
| BsiSI | CCGG | 9 cut(s) | 197, 251, 261, 307, 399, 411, 451, 602, 3208 |
| BslFI | GGGAC | 5 cut(s) | 598, 807, 1354, 1455, 2324 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 411, 529, 791, 1498, 2157, 3018, 3399, 3708, 3808 |
| BsmAI | GTCTC | 9 cut(s) | 198, 231, 319, 412, 698, 854, 922, 2444, 3519 |
| BsmBI | CGTCTC | 3 cut(s) | 198, 231, 412 |
| BsmFI | GGGAC | 5 cut(s) | 598, 807, 1354, 1455, 2324 |
| BsmI | GAATGC | 1 cut(s) | 1418 |
| BsoBI | CYCGRG | 3 cut(s) | 695, 770, 2339 |
| Bsp119I | TTCGAA | 1 cut(s) | 2333 |
| Bsp1286I | GDGCHC | 9 cut(s) | 224, 258, 373, 777, 1045, 1549, 1938, 2164, 2997 |
| Bsp13I | TCCGGA | 1 cut(s) | 306 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2689, 3110 |
| BspACI | CCGC | 9 cut(s) | 26, 29, 51, 153, 215, 523, 553, 2595, 3676 |
| BspCNI | CTCAG | 8 cut(s) | 495, 496, 889, 1057, 1711, 1765, 1921, 2830 |
| BspEI | TCCGGA | 1 cut(s) | 306 |
| BspHI | TCATGA | 2 cut(s) | 1332, 3436 |
| BspLI | GGNNCC | 6 cut(s) | 249, 255, 403, 1443, 3122, 3800 |
| BspMI | ACCTGC | 1 cut(s) | 50 |
| BspPI | GGATC | 1 cut(s) | 760 |
| BspQI | GCTCTTC | 3 cut(s) | 15, 332, 1343 |
| BspT104I | TTCGAA | 1 cut(s) | 2333 |
| BsrDI | GCAATG | 3 cut(s) | 1443, 2685, 3586 |
| BsrFI | RCCGGY | 2 cut(s) | 601, 3207 |
| BsrI | ACTGG | 4 cut(s) | 473, 1252, 3208, 3580 |
| BssAI | RCCGGY | 2 cut(s) | 601, 3207 |
| BssECI | CCNNGG | 6 cut(s) | 162, 163, 297, 580, 1417, 2118 |
| BssHII | GCGCGC | 2 cut(s) | 1947, 1949 |
| BssNAI | GTATAC | 3 cut(s) | 1318, 1536, 3767 |
| BssNI | GRCGYC | 2 cut(s) | 66, 72 |
| BssSI | CACGAG | 1 cut(s) | 329 |
| BssT1I | CCWWGG | 1 cut(s) | 580 |
| Bst1107I | GTATAC | 3 cut(s) | 1318, 1536, 3767 |
| Bst2BI | CACGAG | 1 cut(s) | 329 |
| Bst2UI | CCWGG | 7 cut(s) | 164, 362, 2119, 2196, 2645, 3106, 3703 |
| Bst4CI | ACNGT | 7 cut(s) | 394, 1033, 1207, 1683, 1966, 2019, 3199 |
| Bst6I | CTCTTC | 7 cut(s) | 15, 332, 1068, 1327, 1343, 2335, 3746 |
| BstACI | GRCGYC | 2 cut(s) | 66, 72 |
| BstBI | TTCGAA | 1 cut(s) | 2333 |
| BstDSI | CCRYGG | 1 cut(s) | 297 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1496, 2155 |
| BstMAI | GTCTC | 9 cut(s) | 198, 231, 319, 412, 698, 854, 922, 2444, 3519 |
| BstMCI | CGRYCG | 2 cut(s) | 201, 235 |
| BstNI | CCWGG | 7 cut(s) | 164, 362, 2119, 2196, 2645, 3106, 3703 |
| BstSCI | CCNGG | 9 cut(s) | 162, 360, 410, 450, 2117, 2194, 2643, 3104, 3701 |
| BstSFI | CTRYAG | 1 cut(s) | 3099 |
| BstSLI | GKGCMC | 3 cut(s) | 1045, 1549, 2164 |
| BstV2I | GAAGAC | 4 cut(s) | 1972, 2718, 3315, 3554 |
| BstX2I | RGATCY | 3 cut(s) | 765, 1604, 1956 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 16, 2576 |
| BstYI | RGATCY | 3 cut(s) | 765, 1604, 1956 |
| BstZ17I | GTATAC | 3 cut(s) | 1318, 1536, 3767 |
| Bsu36I | CCTNAGG | 2 cut(s) | 528, 1908 |
| BtgI | CCRYGG | 1 cut(s) | 297 |
| BtgZI | GCGATG | 2 cut(s) | 1310, 1904 |
| BtsI | GCAGTG | 1 cut(s) | 1098 |
| BtsIMutI | CAGTG | 6 cut(s) | 1045, 1098, 1343, 1679, 2677, 3201 |
| BveI | ACCTGC | 1 cut(s) | 50 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3203, 3560 |
| CciI | TCATGA | 2 cut(s) | 1332, 3436 |
| Cfr10I | RCCGGY | 2 cut(s) | 601, 3207 |
| Cfr13I | GGNCC | 9 cut(s) | 124, 160, 680, 1199, 1270, 1442, 3255, 3401, 3799 |
| CseI | GACGC | 4 cut(s) | 74, 80, 284, 1664 |
| CsiI | ACCWGGT | 1 cut(s) | 2194 |
| Csp6I | GTAC | 5 cut(s) | 566, 1255, 1650, 1872, 2419 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2938, 2973 |
| CviQI | GTAC | 5 cut(s) | 566, 1255, 1650, 1872, 2419 |
| DraI | TTTAAA | 4 cut(s) | 724, 2202, 3375, 3793 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2722 |
| EaeI | YGGCCR | 4 cut(s) | 300, 2566, 3205, 3650 |
| Eam1104I | CTCTTC | 7 cut(s) | 15, 332, 1068, 1327, 1343, 2335, 3746 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2722 |
| EarI | CTCTTC | 7 cut(s) | 15, 332, 1068, 1327, 1343, 2335, 3746 |
| Ecl136II | GAGCTC | 1 cut(s) | 775 |
| Eco130I | CCWWGG | 1 cut(s) | 580 |
| Eco147I | AGGCCT | 1 cut(s) | 2643 |
| Eco24I | GRGCYC | 2 cut(s) | 258, 777 |
| Eco32I | GATATC | 1 cut(s) | 3714 |
| Eco47I | GGWCC | 4 cut(s) | 124, 1270, 1442, 3799 |
| Eco53kI | GAGCTC | 1 cut(s) | 775 |
| Eco57I | CTGAAG | 3 cut(s) | 1367, 1757, 2831 |
| Eco81I | CCTNAGG | 2 cut(s) | 528, 1908 |
| Eco88I | CYCGRG | 3 cut(s) | 695, 770, 2339 |
| EcoICRI | GAGCTC | 1 cut(s) | 775 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1496, 2155 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1442 |
| EcoRI | GAATTC | 1 cut(s) | 1987 |
| EcoRII | CCWGG | 7 cut(s) | 162, 360, 2117, 2194, 2643, 3104, 3701 |
| EcoRV | GATATC | 1 cut(s) | 3714 |
| EcoT14I | CCWWGG | 1 cut(s) | 580 |
| EcoT22I | ATGCAT | 1 cut(s) | 3088 |
| EcoT38I | GRGCYC | 2 cut(s) | 258, 777 |
| ErhI | CCWWGG | 1 cut(s) | 580 |
| Esp3I | CGTCTC | 3 cut(s) | 198, 231, 412 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 717, 749 |
| FaqI | GGGAC | 5 cut(s) | 598, 807, 1354, 1455, 2324 |
| FauI | CCCGC | 2 cut(s) | 530, 2588 |
| FauNDI | CATATG | 1 cut(s) | 2545 |
| FbaI | TGATCA | 3 cut(s) | 889, 1140, 3298 |
| FblI | GTMKAC | 4 cut(s) | 746, 1317, 1535, 3766 |
| FriOI | GRGCYC | 2 cut(s) | 258, 777 |
| FspBI | CTAG | 9 cut(s) | 672, 2136, 2394, 2555, 2694, 2936, 3060, 3305, 3774 |
| GsuI | CTGGAG | 2 cut(s) | 2658, 2750 |
| HapII | CCGG | 9 cut(s) | 197, 251, 261, 307, 399, 411, 451, 602, 3208 |
| HgaI | GACGC | 4 cut(s) | 74, 80, 284, 1664 |
| Hin1I | GRCGYC | 2 cut(s) | 66, 72 |
| HincII | GTYRAC | 4 cut(s) | 352, 457, 747, 1156 |
| HindII | GTYRAC | 4 cut(s) | 352, 457, 747, 1156 |
| HindIII | AAGCTT | 7 cut(s) | 1135, 1237, 1743, 2093, 2927, 3629, 3740 |
| HpaI | GTTAAC | 1 cut(s) | 352 |
| HpaII | CCGG | 9 cut(s) | 197, 251, 261, 307, 399, 411, 451, 602, 3208 |
| HphI | GGTGA | 5 cut(s) | 544, 591, 1603, 2042, 3161 |
| Hpy99I | CGWCG | 8 cut(s) | 62, 65, 68, 74, 278, 398, 446, 566 |
| HpyCH4III | ACNGT | 7 cut(s) | 394, 1033, 1207, 1683, 1966, 2019, 3199 |
| HpyCH4IV | ACGT | 4 cut(s) | 564, 1630, 2753, 3379 |
| HpySE526I | ACGT | 4 cut(s) | 564, 1630, 2753, 3379 |
| Hsp92I | GRCGYC | 2 cut(s) | 66, 72 |
| Kpn2I | TCCGGA | 1 cut(s) | 306 |
| KroI | GCCGGC | 1 cut(s) | 3207 |
| KroNI | GCCGGC | 1 cut(s) | 3209 |
| Ksp22I | TGATCA | 3 cut(s) | 889, 1140, 3298 |
| KspAI | GTTAAC | 1 cut(s) | 352 |
| LguI | GCTCTTC | 3 cut(s) | 15, 332, 1343 |
| LmnI | GCTCC | 7 cut(s) | 247, 253, 285, 401, 780, 2766, 3492 |
| LweI | GCATC | 5 cut(s) | 706, 2956, 3095, 3251, 3475 |
| MabI | ACCWGGT | 1 cut(s) | 2194 |
| MaeI | CTAG | 9 cut(s) | 672, 2136, 2394, 2555, 2694, 2936, 3060, 3305, 3774 |
| MaeII | ACGT | 4 cut(s) | 564, 1630, 2753, 3379 |
| MaeIII | GTNAC | 9 cut(s) | 263, 555, 811, 1620, 1677, 1683, 2104, 3199, 3506 |
| MauBI | CGCGCGCG | 1 cut(s) | 1949 |
| MfeI | CAATTG | 3 cut(s) | 1539, 2025, 2849 |
| MflI | RGATCY | 3 cut(s) | 765, 1604, 1956 |
| MhlI | GDGCHC | 9 cut(s) | 224, 258, 373, 777, 1045, 1549, 1938, 2164, 2997 |
| MlsI | TGGCCA | 2 cut(s) | 2568, 3652 |
| MluI | ACGCGT | 1 cut(s) | 3642 |
| MluNI | TGGCCA | 2 cut(s) | 2568, 3652 |
| MlyI | GAGTC | 6 cut(s) | 351, 700, 1117, 1577, 1628, 3398 |
| MmeI | TCCRAC | 1 cut(s) | 945 |
| Mox20I | TGGCCA | 2 cut(s) | 2568, 3652 |
| Mph1103I | ATGCAT | 1 cut(s) | 3088 |
| MroI | TCCGGA | 1 cut(s) | 306 |
| MroNI | GCCGGC | 1 cut(s) | 3207 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2282 |
| MscI | TGGCCA | 2 cut(s) | 2568, 3652 |
| MslI | CAYNNNNRTG | 2 cut(s) | 14, 2574 |
| Msp20I | TGGCCA | 2 cut(s) | 2568, 3652 |
| MspA1I | CMGCKG | 2 cut(s) | 668, 2126 |
| MspI | CCGG | 9 cut(s) | 197, 251, 261, 307, 399, 411, 451, 602, 3208 |
| MspR9I | CCNGG | 9 cut(s) | 164, 362, 412, 452, 2119, 2196, 2645, 3106, 3703 |
| MunI | CAATTG | 3 cut(s) | 1539, 2025, 2849 |
| Mva1269I | GAATGC | 1 cut(s) | 1418 |
| MvaI | CCWGG | 7 cut(s) | 164, 362, 2119, 2196, 2645, 3106, 3703 |
| NaeI | GCCGGC | 1 cut(s) | 3209 |
| NciI | CCSGG | 2 cut(s) | 412, 452 |
| NdeI | CATATG | 1 cut(s) | 2545 |
| NgoMIV | GCCGGC | 1 cut(s) | 3207 |
| NlaIV | GGNNCC | 6 cut(s) | 249, 255, 403, 1443, 3122, 3800 |
| NmuCI | GTSAC | 6 cut(s) | 263, 1620, 1677, 2104, 3199, 3506 |
| NsiI | ATGCAT | 1 cut(s) | 3088 |
| NspV | TTCGAA | 1 cut(s) | 2333 |
| PaeR7I | CTCGAG | 3 cut(s) | 695, 770, 2339 |
| PagI | TCATGA | 2 cut(s) | 1332, 3436 |
| PaqCI | CACCTGC | 1 cut(s) | 50 |
| PasI | CCCWGGG | 1 cut(s) | 163 |
| PauI | GCGCGC | 2 cut(s) | 1947, 1949 |
| PceI | AGGCCT | 1 cut(s) | 2643 |
| PciSI | GCTCTTC | 3 cut(s) | 15, 332, 1343 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 66, 72, 402, 768 |
| PctI | GAATGC | 1 cut(s) | 1418 |
| PdiI | GCCGGC | 1 cut(s) | 3209 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2282 |
| Ple19I | CGATCG | 1 cut(s) | 235 |
| PleI | GAGTC | 6 cut(s) | 351, 699, 1116, 1576, 1627, 3397 |
| PpsI | GAGTC | 6 cut(s) | 351, 699, 1116, 1576, 1627, 3397 |
| PpuMI | RGGWCCY | 1 cut(s) | 1442 |
| PsiI | TTATAA | 1 cut(s) | 2666 |
| Psp124BI | GAGCTC | 1 cut(s) | 777 |
| Psp1406I | AACGTT | 1 cut(s) | 2753 |
| Psp5II | RGGWCCY | 1 cut(s) | 1442 |
| Psp6I | CCWGG | 7 cut(s) | 162, 360, 2117, 2194, 2643, 3104, 3701 |
| PspGI | CCWGG | 7 cut(s) | 162, 360, 2117, 2194, 2643, 3104, 3701 |
| PspN4I | GGNNCC | 6 cut(s) | 249, 255, 403, 1443, 3122, 3800 |
| PspPI | GGNCC | 9 cut(s) | 124, 160, 680, 1199, 1270, 1442, 3255, 3401, 3799 |
| PspPPI | RGGWCCY | 1 cut(s) | 1442 |
| PspXI | VCTCGAGB | 2 cut(s) | 770, 2339 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3203, 3560 |
| PsuI | RGATCY | 3 cut(s) | 765, 1604, 1956 |
| PteI | GCGCGC | 2 cut(s) | 1947, 1949 |
| PvuI | CGATCG | 1 cut(s) | 235 |
| PvuII | CAGCTG | 2 cut(s) | 668, 2126 |
| RsaI | GTAC | 5 cut(s) | 567, 1256, 1651, 1873, 2420 |
| RsaNI | GTAC | 5 cut(s) | 566, 1255, 1650, 1872, 2419 |
| RseI | CAYNNNNRTG | 2 cut(s) | 14, 2574 |
| SacI | GAGCTC | 1 cut(s) | 777 |
| SalI | GTCGAC | 1 cut(s) | 745 |
| SapI | GCTCTTC | 3 cut(s) | 15, 332, 1343 |
| Sau96I | GGNCC | 9 cut(s) | 124, 160, 680, 1199, 1270, 1442, 3255, 3401, 3799 |
| SchI | GAGTC | 6 cut(s) | 351, 700, 1117, 1577, 1628, 3398 |
| ScrFI | CCNGG | 9 cut(s) | 164, 362, 412, 452, 2119, 2196, 2645, 3106, 3703 |
| SduI | GDGCHC | 9 cut(s) | 224, 258, 373, 777, 1045, 1549, 1938, 2164, 2997 |
| SexAI | ACCWGGT | 1 cut(s) | 2194 |
| SfaNI | GCATC | 5 cut(s) | 706, 2956, 3095, 3251, 3475 |
| SfcI | CTRYAG | 1 cut(s) | 3099 |
| Sfr274I | CTCGAG | 3 cut(s) | 695, 770, 2339 |
| SfuI | TTCGAA | 1 cut(s) | 2333 |
| SinI | GGWCC | 4 cut(s) | 124, 1270, 1442, 3799 |
| SlaI | CTCGAG | 3 cut(s) | 695, 770, 2339 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 14, 2574 |
| SmlI | CTYRAG | 7 cut(s) | 695, 770, 1616, 1795, 1927, 2339, 3760 |
| SmoI | CTYRAG | 7 cut(s) | 695, 770, 1616, 1795, 1927, 2339, 3760 |
| SpeI | ACTAGT | 1 cut(s) | 3773 |
| SseBI | AGGCCT | 1 cut(s) | 2643 |
| SsiI | CCGC | 9 cut(s) | 26, 29, 51, 153, 215, 523, 553, 2595, 3676 |
| SspI | AATATT | 2 cut(s) | 973, 1524 |
| SspMI | CTAG | 9 cut(s) | 672, 2136, 2394, 2555, 2694, 2936, 3060, 3305, 3774 |
| SstI | GAGCTC | 1 cut(s) | 777 |
| StuI | AGGCCT | 1 cut(s) | 2643 |
| StyD4I | CCNGG | 9 cut(s) | 162, 360, 410, 450, 2117, 2194, 2643, 3104, 3701 |
| StyI | CCWWGG | 1 cut(s) | 580 |
| TaaI | ACNGT | 7 cut(s) | 394, 1033, 1207, 1683, 1966, 2019, 3199 |
| TaiI | ACGT | 4 cut(s) | 567, 1633, 2756, 3382 |
| TatI | WGTACW | 2 cut(s) | 1254, 1649 |
| TauI | GCSGC | 5 cut(s) | 28, 31, 156, 218, 3678 |
| TscAI | CASTG | 6 cut(s) | 1045, 1098, 1350, 1686, 2677, 3208 |
| TseFI | GTSAC | 6 cut(s) | 263, 1620, 1677, 2104, 3199, 3506 |
| Tsp45I | GTSAC | 6 cut(s) | 263, 1620, 1677, 2104, 3199, 3506 |
| TspGWI | ACGGA | 8 cut(s) | 180, 286, 369, 842, 1204, 1580, 1612, 3191 |
| TspRI | CASTG | 6 cut(s) | 1045, 1098, 1350, 1686, 2677, 3208 |
| VneI | GTGCAC | 2 cut(s) | 1041, 1545 |
| VpaK11BI | GGWCC | 4 cut(s) | 124, 1270, 1442, 3799 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1496, 2155 |
| XapI | RAATTY | 3 cut(s) | 1806, 1987, 3370 |
| XbaI | TCTAGA | 1 cut(s) | 3059 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 3200, 3645 |
| XhoI | CTCGAG | 3 cut(s) | 695, 770, 2339 |
| XmiI | GTMKAC | 4 cut(s) | 746, 1317, 1535, 3766 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2282 |
| XspI | CTAG | 9 cut(s) | 672, 2136, 2394, 2555, 2694, 2936, 3060, 3305, 3774 |
| Zsp2I | ATGCAT | 1 cut(s) | 3088 |