Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0006794

Physical Location & Seq

Genomic Coordinates Reverse (-)

14042420 .. 14047431

Gene Structure 5012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g19640.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2676 bp

ATGGAAGGCATCGAAGTGGACGACGTCCACTCCCTCCCTCTAAGCGACGATGACGACATCTGCGCCTCAATCTTCACGCGCTTCAGCAGCTCCACGCGCGAAGACCACCACCACCTCTGTGCCGCCGTCGGCGCCATGGCCCAGGAGCTCAAAGACAAGAACCTCCCTTCGACTCCCGTCGCATACCTCGGCTTCACGTGCTCGTCCCTCGACGGCCTCGCCTCCCAGCCAGACCCACCCGGTCACGTGATCGACGCCCTCCTCACGATTCTCTCCATTGTGTTTCAGAAAGTATCGGTGGGGATTCTCGTGAAGAAGAGCGAGTTCTTATCGGAGCTCTTGGTCCGTGTTCTTCGGTCGCCGTCGTTGACGGTGGGTGCCGCCGTCTCGGGATTGAAATGTATATCGCATTTGCTCATTGTCAGAGGCCGCGTCAACTGGTCTGATGCCTCTCAATTGTATGGATTCCTATTGAGTTTCGTTACGGATTCTCGCCCGAAGGTGAGAAGACAATCACATTTGTGTCTTCGCGATGTGCTGCAAAGTTTTCAAGGAACACCGCTCCTCGCCCCCGCAAGTGAAGGGATAACTAACTTATTTGAAAGGTTTCTTCTGCTTGCCGGTGGGTCAAGTGCAGATGCGAGTGAAGGACCCAAGGGAGCCCAAGAGGTCTTGTATGTTTTGGATGCTCTGAAAGAGTGTCTGTTTCTTATGTCAATCAAGTACAAAACCAACGTCCTCAAGTACTACAAAACTCTTCTGGAACTGCGCCAACCACTTGTTACAAAGCGCATAACAGACAGTTTGAATATACTTTGTCTCAATCCATCAACAGATGTTTCTCTTGAAGTGTTGCTCGATCTATTATGCTCATTAGCTCTTTCTGTCTCTACGAATGAGACATCTGTGGATGGCATGACATTTACAGCTCGCTTGCTTGGTACTGGAATGGCGAAAGTTTATTCCCTTAATAGGCAAATATGTGTAGTTAAACTCCCTCTTGTATTCAATGCACTCAAAGATGTGTTGGCATCTGAGCATGAAGAGGCTATACACGCAGCAGCGGACACATTTAAGAGTCTCATTCGTGCTTGCATTGATGAAAGCTTGGTCAAACAGGGAGTTGACCAGATTGTAATGAATGCAAAAAATGATGCAAGGAAGTCTGGGCCAACTATAATTGAAAAAGTGTGTGCTACTATTGAAAGCTTACTTGGTTATCACTACGCAGGTGTCTGGGACCTTGCATTTCAAGTTGTCTCAGCAATGTTTGATAAACTTGGGGTATACTCTTCTTATTTCATGAGGGGCGCGATGAAGAGCTTGGAGGAAATGGAGAAGTTACCTGATGAAGATTTCCCTTTCAGGAAACAGTTGCATGAATGCTTTGGATCGGCTCTTGTTGCAATGGGACCTGAAACATTTTTAGGTCTTCTACCTCTTAATTTGGAGGCTGAAGACCTAAGTCAGGTGAATGTTTGGCTCTTTCCAATACTGAAGCAGTATACAATTGGTGCACGTTTGAGCTTCTTTACGGAGTCAATTTTGGGTATGGTTGGAATGATAAAGGAGAAATCTAAAAAGCTGGAGTCACAAGGACGTATTGTTTCATCAAGGAGTTCAGATGCGCTTGTACACGCTTTGTGGTCACTGTTACCTTCCTTTTGCAACTATGCTTCTGATGCTGCTGAAAGTTTCAAGGATCTAGAGCAAGCCTTGTGCAGTGCCCTTCAGGATGAACCTGAGATTCGTGGGATAATATGCTTGAGCTTGCAGATTCTTGTTCAACAAAATAAGAAAATTGTGGAAGTGATCGATCTGTCTGATAGTGAATTAGGCAGCGCCAGACATAGAGCTATGGCCAATTATACCCCTGAAGTTAGAGAAGGTAACATGAGCGTACTCAAGTCATCTGCACGCAAGTTACTACCTGTTCTATCCGGTGTTTTCTTGAATACCACAAAAGATGATGCAGGCTGTTTGCAGTCCACAATTGGTGAGTTTGCTTCAATATCAGATAAAGAAGTTGTGTCTAGATATTTTAGAAGTACATTGGTGAAGCTTTTGAAGGTTACTGAAGAGGCTAGGAAAGCAGAAAGCTCTAGAGATTCTAATACCATGCGGGCACAACTATTTGACTTGGCAGTCTCACTTTTACCTGGTTTGGATGCTAAAGAGGTTGATGTTTTATTTAGTGCAATAAAGACTGCATTGCAGGATAATGAAGGATTGATACAAAAGAAGGCATACAAAGTTCTTTCAATCATTCTCAGGGACTGTGATTGGTTTCTTTCATCGAAGCGCAAGGAATTGTCTGATATTATGATTGAAGTACTTCCTTCATGCCATTTTTCAGCTAAACGGCACAGACTTGACTGCTTGTACCTCCTAGTAGTCCATGTTTCAAAGAGCGACACTGAGCAGATGCAGCATGATATCATAAGTTCTTTCCTGACAGAAATAATTCTTGCGCTTAAAGAGGCTAACAAGAAAACAAGAAATAGAGCTTATGACATCCTTGTCCAAATTGGCCATGCTTGTGGAGACGAGGAGACTGGCCGGAAGAGAGAAAACCTGCTGCAATTTTTTAACATGGTAGCTGGGGGGCTAGCTGGTGAAACTCCTCATATGATCGATCAGTGCTGCAATGAAGGGTTTAGCTCGGTTGGCTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC173

Protein Analysis

892

Amino Acids

98.26

Weight (kDa)

5.78

Isoelectric Point (pI)

42.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006794)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34357
fragaria_vesca	FvH4_1g09210 FvH4_6g18960
malus_domestica	MD02G1098900.v1.1 MD02G1099100.v1.1 MD15G1221900.v1.1
prunus_persica	Prupe.6G204300_v2.0.a1 Prupe.6G204300_v2.0.a1 Prupe.6G204500_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G193800_v2.0.a1
pyrus_communis	pycom02g07730 pycom15g19640
rosa_chinensis	RchiOBHm_Chr2g0095731
rosa_laevigata	RLG00000016587 RLG00000016588
rosa_multiflora	Rmu_sc0001309.1_g000002 Rmu_sc0001309.1_g000003
rosa_roxburghii	Rroxscaffold_2G00146140
rosa_rugosa	Rorug02G0052900
rosa_samantha	Rh2AG101100 Rh2BG102800 Rh2CG105200 Rh2DG102600
rosa_wichuraiana	Rw2G007670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1220
AasI	GACNNNNNNGTC	2 cut(s)	2144, 2519
AatII	GACGTC	1 cut(s)	27
Acc36I	ACCTGC	2 cut(s)	1220, 2583
AccB1I	GGYRCC	2 cut(s)	131, 377
AccBSI	CCGCTC	1 cut(s)	562
AccI	GTMKAC	2 cut(s)	1287, 1505
AccII	CGCG	6 cut(s)	79, 97, 99, 432, 531, 1313
AciI	CCGC	7 cut(s)	123, 381, 430, 560, 573, 1064, 2122
AclWI	GGATC	2 cut(s)	1399, 1710
AcoI	YGGCCR	3 cut(s)	1860, 2530, 2557
AcuI	CTGAAG	6 cut(s)	67, 1476, 1517, 1715, 1896, 2097
AcvI	CACGTG	2 cut(s)	198, 247
AcyI	GRCGYC	3 cut(s)	24, 132, 255
AfaI	GTAC	8 cut(s)	725, 746, 943, 1635, 1902, 2050, 2334, 2384
AfiI	CCNNNNNNNGG	2 cut(s)	972, 1468
AjnI	CCWGG	2 cut(s)	141, 2158
AjuI	GAANNNNNNNTTGG	2 cut(s)	1197, 1229
AleI	CACNNNNGTG	2 cut(s)	117, 520
Alw21I	GWGCWC	4 cut(s)	150, 203, 339, 1519
Alw26I	GTCTC	9 cut(s)	391, 824, 892, 893, 1085, 1264, 2152, 2538, 2546
Alw44I	GTGCAC	1 cut(s)	1515
AlwI	GGATC	2 cut(s)	1399, 1710
AlwNI	CAGNNNCTG	1 cut(s)	2277
Ama87I	CYCGRG	1 cut(s)	388
AoxI	GGCC	7 cut(s)	138, 214, 427, 1169, 1860, 2530, 2557
ApaLI	GTGCAC	1 cut(s)	1515
ApeKI	GCWGC	9 cut(s)	87, 538, 1058, 1061, 1685, 1839, 2428, 2578, 2643
ArsI	GACNNNNNNTTYG	2 cut(s)	720, 752
Asp700I	GAANNNNTTC	3 cut(s)	606, 2334, 2463
AspS9I	GGNCC	6 cut(s)	139, 343, 650, 1169, 1240, 1412
AsuC2I	CCSGG	1 cut(s)	240
AsuHPI	GGTGA	5 cut(s)	514, 1483, 2009, 2068, 2627
AsuNHI	GCTAGC	1 cut(s)	2608
AvaI	CYCGRG	1 cut(s)	388
AvaII	GGWCC	4 cut(s)	343, 650, 1240, 1412
BaeGI	GKGCMC	3 cut(s)	1519, 1729, 2128
BalI	TGGCCA	2 cut(s)	1862, 2532
BanI	GGYRCC	2 cut(s)	131, 377
BanII	GRGCYC	3 cut(s)	150, 339, 664
BarI	GAAGNNNNNNTAC	4 cut(s)	1035, 1067, 2217, 2249
BauI	CACGAG	1 cut(s)	308
BbrPI	CACGTG	2 cut(s)	198, 247
BbsI	GAAGAC	5 cut(s)	108, 514, 518, 1424, 1464
Bbv12I	GWGCWC	4 cut(s)	150, 203, 339, 1519
BbvI	GCAGC	9 cut(s)	99, 525, 1070, 1073, 1672, 1851, 2440, 2565, 2630
BccI	CCATC	2 cut(s)	835, 905
BceAI	ACGGC	5 cut(s)	110, 229, 346, 368, 2378
BciT130I	CCWGG	2 cut(s)	143, 2160
BcnI	CCSGG	1 cut(s)	240
BcoDI	GTCTC	9 cut(s)	391, 824, 892, 893, 1085, 1264, 2152, 2538, 2546
BfaI	CTAG	6 cut(s)	1706, 2034, 2085, 2103, 2390, 2609
BfoI	RGCGCY	2 cut(s)	135, 1845
BfuAI	ACCTGC	2 cut(s)	1220, 2583
BmcAI	AGTACT	2 cut(s)	746, 2334
Bme1390I	CCNGG	3 cut(s)	143, 240, 2160
Bme18I	GGWCC	4 cut(s)	343, 650, 1240, 1412
BmeT110I	CYCGRG	1 cut(s)	388
BmgT120I	GGNCC	6 cut(s)	139, 343, 650, 1169, 1240, 1412
BmiI	GGNNCC	6 cut(s)	133, 379, 652, 661, 1241, 1413
BmrFI	CCNGG	3 cut(s)	143, 240, 2160
BmtI	GCTAGC	1 cut(s)	2612
BoxI	GACNNNNGTC	2 cut(s)	176, 1464
BpiI	GAAGAC	5 cut(s)	108, 514, 518, 1424, 1464
BpmI	CTGGAG	1 cut(s)	1607
BpuEI	CTTGAG	3 cut(s)	725, 1786, 1889
BpuMI	CCSGG	1 cut(s)	240
Bsa29I	ATCGAT	2 cut(s)	1815, 2634
BsaAI	YACGTR	2 cut(s)	198, 247
BsaHI	GRCGYC	3 cut(s)	24, 132, 255
BsaJI	CCNNGG	4 cut(s)	135, 141, 187, 654
BsaWI	WCCGGW	1 cut(s)	1940
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	2 cut(s)	972, 1468
Bse118I	RCCGGY	1 cut(s)	620
Bse1I	ACTGG	3 cut(s)	443, 949, 2560
Bse3DI	GCAATG	4 cut(s)	1272, 1413, 2210, 2653
BseBI	CCWGG	2 cut(s)	143, 2160
BseCI	ATCGAT	2 cut(s)	1815, 2634
BseDI	CCNNGG	4 cut(s)	135, 141, 187, 654
BseGI	GGATG	5 cut(s)	691, 916, 1741, 2173, 2514
BseLI	CCNNNNNNNGG	2 cut(s)	972, 1468
BseMI	GCAATG	4 cut(s)	1272, 1413, 2210, 2653
BseMII	CTCAG	5 cut(s)	1026, 1275, 1734, 2284, 2409
BseNI	ACTGG	3 cut(s)	443, 949, 2560
BseRI	GAGGAG	4 cut(s)	251, 554, 2564, 2613
BseSI	GKGCMC	3 cut(s)	1519, 1729, 2128
BseXI	GCAGC	9 cut(s)	99, 525, 1070, 1073, 1672, 1851, 2440, 2565, 2630
BseYI	CCCAGC	2 cut(s)	225, 2600
BsgI	GTGCAG	3 cut(s)	654, 1741, 1899
Bsh1236I	CGCG	6 cut(s)	79, 97, 99, 432, 531, 1313
Bsh1285I	CGRYCG	1 cut(s)	359
BshFI	GGCC	7 cut(s)	140, 216, 429, 1171, 1862, 2532, 2559
BshNI	GGYRCC	2 cut(s)	131, 377
BshVI	ATCGAT	2 cut(s)	1815, 2634
BsiEI	CGRYCG	1 cut(s)	359
BsiHKAI	GWGCWC	4 cut(s)	150, 203, 339, 1519
BsiHKCI	CYCGRG	1 cut(s)	388
BsiSI	CCGG	4 cut(s)	240, 621, 1941, 2560
BslFI	GGGAC	4 cut(s)	190, 1253, 1425, 2288
BslI	CCNNNNNNNGG	2 cut(s)	972, 1468
BsmAI	GTCTC	9 cut(s)	391, 824, 892, 893, 1085, 1264, 2152, 2538, 2546
BsmBI	CGTCTC	2 cut(s)	391, 2538
BsmFI	GGGAC	4 cut(s)	190, 1253, 1425, 2288
BsmI	GAATGC	2 cut(s)	1147, 1388
BsnI	GGCC	7 cut(s)	140, 216, 429, 1171, 1862, 2532, 2559
BsoBI	CYCGRG	1 cut(s)	388
Bsp1286I	GDGCHC	7 cut(s)	150, 203, 339, 664, 1519, 1729, 2128
Bsp1407I	TGTACA	1 cut(s)	1633
Bsp143I	GATC	8 cut(s)	249, 859, 1391, 1702, 1812, 1816, 2631, 2635
Bsp19I	CCATGG	1 cut(s)	135
Bsp68I	TCGCGA	1 cut(s)	531
BspACI	CCGC	7 cut(s)	123, 381, 430, 560, 573, 1064, 2122
BspANI	GGCC	7 cut(s)	140, 216, 429, 1171, 1862, 2532, 2559
BspCNI	CTCAG	5 cut(s)	1027, 1274, 1735, 2283, 2410
BspDI	ATCGAT	2 cut(s)	1815, 2634
BspFNI	CGCG	6 cut(s)	79, 97, 99, 432, 531, 1313
BspHI	TCATGA	1 cut(s)	1302
BspLI	GGNNCC	6 cut(s)	133, 379, 652, 661, 1241, 1413
BspMI	ACCTGC	2 cut(s)	1220, 2583
BspOI	GCTAGC	1 cut(s)	2612
BspPI	GGATC	2 cut(s)	1399, 1710
BspQI	GCTCTTC	2 cut(s)	311, 1313
BspT107I	GGYRCC	2 cut(s)	131, 377
BsrBI	CCGCTC	1 cut(s)	562
BsrDI	GCAATG	4 cut(s)	1272, 1413, 2210, 2653
BsrFI	RCCGGY	1 cut(s)	620
BsrGI	TGTACA	1 cut(s)	1633
BsrI	ACTGG	3 cut(s)	443, 949, 2560
BssAI	RCCGGY	1 cut(s)	620
BssECI	CCNNGG	4 cut(s)	135, 141, 187, 654
BssMI	GATC	8 cut(s)	249, 859, 1391, 1702, 1812, 1816, 2631, 2635
BssNAI	GTATAC	2 cut(s)	1288, 1506
BssNI	GRCGYC	3 cut(s)	24, 132, 255
BssSI	CACGAG	1 cut(s)	308
BssT1I	CCWWGG	2 cut(s)	135, 654
Bst1107I	GTATAC	2 cut(s)	1288, 1506
Bst2BI	CACGAG	1 cut(s)	308
Bst2UI	CCWGG	2 cut(s)	143, 2160
Bst4CI	ACNGT	5 cut(s)	373, 803, 1374, 1653, 2279
Bst6I	CTCTTC	7 cut(s)	311, 762, 1038, 1297, 1313, 2073, 2558
BstACI	GRCGYC	3 cut(s)	24, 132, 255
BstAUI	TGTACA	1 cut(s)	1633
BstBAI	YACGTR	2 cut(s)	198, 247
BstDEI	CTNAG	7 cut(s)	41, 1035, 1261, 1463, 1743, 2270, 2418
BstDSI	CCRYGG	1 cut(s)	135
BstENI	CCTNNNNNAGG	1 cut(s)	1466
BstF5I	GGATG	5 cut(s)	691, 916, 1741, 2173, 2514
BstFNI	CGCG	6 cut(s)	79, 97, 99, 432, 531, 1313
BstH2I	RGCGCY	2 cut(s)	135, 1845
BstKTI	GATC	8 cut(s)	252, 862, 1394, 1705, 1815, 1819, 2634, 2638
BstMAI	GTCTC	9 cut(s)	391, 824, 892, 893, 1085, 1264, 2152, 2538, 2546
BstMBI	GATC	8 cut(s)	249, 859, 1391, 1702, 1812, 1816, 2631, 2635
BstMCI	CGRYCG	1 cut(s)	359
BstNI	CCWGG	2 cut(s)	143, 2160
BstPAI	GACNNNNGTC	2 cut(s)	176, 1464
BstSCI	CCNGG	3 cut(s)	141, 238, 2158
BstSLI	GKGCMC	3 cut(s)	1519, 1729, 2128
BstUI	CGCG	6 cut(s)	79, 97, 99, 432, 531, 1313
BstV1I	GCAGC	9 cut(s)	99, 525, 1070, 1073, 1672, 1851, 2440, 2565, 2630
BstV2I	GAAGAC	5 cut(s)	108, 514, 518, 1424, 1464
BstX2I	RGATCY	1 cut(s)	1702
BstXI	CCANNNNNNTGG	1 cut(s)	2540
BstYI	RGATCY	1 cut(s)	1702
BstZ17I	GTATAC	2 cut(s)	1288, 1506
Bsu15I	ATCGAT	2 cut(s)	1815, 2634
BsuRI	GGCC	7 cut(s)	140, 216, 429, 1171, 1862, 2532, 2559
BsuTUI	ATCGAT	2 cut(s)	1815, 2634
BtgI	CCRYGG	1 cut(s)	135
BtgZI	GCGATG	2 cut(s)	546, 1328
BtsCI	GGATG	5 cut(s)	691, 916, 1741, 2173, 2514
BtsI	GCAGTG	1 cut(s)	1729
BtsIMutI	CAGTG	4 cut(s)	1649, 1729, 2415, 2645
BtuMI	TCGCGA	1 cut(s)	531
BveI	ACCTGC	2 cut(s)	1220, 2583
CaiI	CAGNNNCTG	1 cut(s)	2277
CciI	TCATGA	1 cut(s)	1302
Cfr10I	RCCGGY	1 cut(s)	620
Cfr13I	GGNCC	6 cut(s)	139, 343, 650, 1169, 1240, 1412
ClaI	ATCGAT	2 cut(s)	1815, 2634
CseI	GACGC	2 cut(s)	263, 421
CsiI	ACCWGGT	1 cut(s)	2158
Csp6I	GTAC	8 cut(s)	724, 745, 942, 1634, 1901, 2049, 2333, 2383
CviQI	GTAC	8 cut(s)	724, 745, 942, 1634, 1901, 2049, 2333, 2383
DdeI	CTNAG	7 cut(s)	41, 1035, 1261, 1463, 1743, 2270, 2418
DinI	GGCGCC	1 cut(s)	133
DpnI	GATC	8 cut(s)	251, 861, 1393, 1704, 1814, 1818, 2633, 2637
DpnII	GATC	8 cut(s)	249, 859, 1391, 1702, 1812, 1816, 2631, 2635
DrdI	GACNNNNNNGTC	2 cut(s)	2144, 2519
DseDI	GACNNNNNNGTC	2 cut(s)	2144, 2519
EaeI	YGGCCR	3 cut(s)	1860, 2530, 2557
Eam1104I	CTCTTC	7 cut(s)	311, 762, 1038, 1297, 1313, 2073, 2558
EarI	CTCTTC	7 cut(s)	311, 762, 1038, 1297, 1313, 2073, 2558
Ecl136II	GAGCTC	2 cut(s)	148, 337
Eco130I	CCWWGG	2 cut(s)	135, 654
Eco24I	GRGCYC	3 cut(s)	150, 339, 664
Eco32I	GATATC	1 cut(s)	2437
Eco47I	GGWCC	4 cut(s)	343, 650, 1240, 1412
Eco53kI	GAGCTC	2 cut(s)	148, 337
Eco57I	CTGAAG	6 cut(s)	67, 1476, 1517, 1715, 1896, 2097
Eco72I	CACGTG	2 cut(s)	198, 247
Eco88I	CYCGRG	1 cut(s)	388
EcoICRI	GAGCTC	2 cut(s)	148, 337
EcoNI	CCTNNNNNAGG	1 cut(s)	1466
EcoO109I	RGGNCCY	3 cut(s)	650, 1240, 1412
EcoRII	CCWGG	2 cut(s)	141, 2158
EcoRV	GATATC	1 cut(s)	2437
EcoT14I	CCWWGG	2 cut(s)	135, 654
EcoT38I	GRGCYC	3 cut(s)	150, 339, 664
EgeI	GGCGCC	1 cut(s)	133
EheI	GGCGCC	1 cut(s)	133
ErhI	CCWWGG	2 cut(s)	135, 654
Esp3I	CGTCTC	2 cut(s)	391, 2538
FaqI	GGGAC	4 cut(s)	190, 1253, 1425, 2288
FauI	CCCGC	2 cut(s)	580, 2115
FauNDI	CATATG	1 cut(s)	2628
FblI	GTMKAC	2 cut(s)	1287, 1505
FokI	GGATG	5 cut(s)	698, 923, 1748, 2180, 2501
FriOI	GRGCYC	3 cut(s)	150, 339, 664
FspBI	CTAG	6 cut(s)	1706, 2034, 2085, 2103, 2390, 2609
GsaI	CCCAGC	2 cut(s)	229, 2604
GsuI	CTGGAG	1 cut(s)	1607
HaeII	RGCGCY	2 cut(s)	135, 1845
HaeIII	GGCC	7 cut(s)	140, 216, 429, 1171, 1862, 2532, 2559
HapII	CCGG	4 cut(s)	240, 621, 1941, 2560
HgaI	GACGC	2 cut(s)	263, 421
Hin1I	GRCGYC	3 cut(s)	24, 132, 255
HincII	GTYRAC	3 cut(s)	369, 436, 1126
HindII	GTYRAC	3 cut(s)	369, 436, 1126
HindIII	AAGCTT	3 cut(s)	1105, 1207, 2060
HpaII	CCGG	4 cut(s)	240, 621, 1941, 2560
HphI	GGTGA	5 cut(s)	514, 1483, 2009, 2068, 2627
Hpy99I	CGWCG	7 cut(s)	26, 50, 131, 182, 215, 257, 367
HpyCH4III	ACNGT	5 cut(s)	373, 803, 1374, 1653, 2279
HpyCH4IV	ACGT	6 cut(s)	24, 197, 246, 735, 1519, 1600
HpyF3I	CTNAG	7 cut(s)	41, 1035, 1261, 1463, 1743, 2270, 2418
HpySE526I	ACGT	6 cut(s)	24, 197, 246, 735, 1519, 1600
Hsp92I	GRCGYC	3 cut(s)	24, 132, 255
KasI	GGCGCC	1 cut(s)	131
Kzo9I	GATC	8 cut(s)	249, 859, 1391, 1702, 1812, 1816, 2631, 2635
LguI	GCTCTTC	2 cut(s)	311, 1313
LmnI	GCTCC	5 cut(s)	95, 145, 334, 567, 659
Lsp1109I	GCAGC	9 cut(s)	99, 525, 1070, 1073, 1672, 1851, 2440, 2565, 2630
MabI	ACCWGGT	1 cut(s)	2158
MaeI	CTAG	6 cut(s)	1706, 2034, 2085, 2103, 2390, 2609
MaeII	ACGT	6 cut(s)	24, 197, 246, 735, 1519, 1600
MalI	GATC	8 cut(s)	251, 861, 1393, 1704, 1814, 1818, 2633, 2637
MbiI	CCGCTC	1 cut(s)	562
MboI	GATC	8 cut(s)	249, 859, 1391, 1702, 1812, 1816, 2631, 2635
MfeI	CAATTG	3 cut(s)	455, 1509, 1992
MflI	RGATCY	1 cut(s)	1702
MhlI	GDGCHC	7 cut(s)	150, 203, 339, 664, 1519, 1729, 2128
MlsI	TGGCCA	2 cut(s)	1862, 2532
MluNI	TGGCCA	2 cut(s)	1862, 2532
Mly113I	GGCGCC	1 cut(s)	132
MlyI	GAGTC	4 cut(s)	166, 1087, 1547, 1598
MmeI	TCCRAC	1 cut(s)	1537
Mox20I	TGGCCA	2 cut(s)	1862, 2532
MroXI	GAANNNNTTC	3 cut(s)	606, 2334, 2463
MscI	TGGCCA	2 cut(s)	1862, 2532
MseI	TTAA	6 cut(s)	969, 990, 1074, 1443, 2475, 2589
MslI	CAYNNNNRTG	4 cut(s)	14, 117, 520, 2538
Msp20I	TGGCCA	2 cut(s)	1862, 2532
MspA1I	CMGCKG	1 cut(s)	1064
MspI	CCGG	4 cut(s)	240, 621, 1941, 2560
MspR9I	CCNGG	3 cut(s)	143, 240, 2160
MunI	CAATTG	3 cut(s)	455, 1509, 1992
Mva1269I	GAATGC	2 cut(s)	1147, 1388
MvaI	CCWGG	2 cut(s)	143, 2160
MvnI	CGCG	6 cut(s)	79, 97, 99, 432, 531, 1313
NarI	GGCGCC	1 cut(s)	132
NciI	CCSGG	1 cut(s)	240
NcoI	CCATGG	1 cut(s)	135
NdeI	CATATG	1 cut(s)	2628
NdeII	GATC	8 cut(s)	249, 859, 1391, 1702, 1812, 1816, 2631, 2635
NheI	GCTAGC	1 cut(s)	2608
NlaIV	GGNNCC	6 cut(s)	133, 379, 652, 661, 1241, 1413
NmeAIII	GCCGAG	1 cut(s)	168
NmuCI	GTSAC	3 cut(s)	242, 1590, 1647
NruI	TCGCGA	1 cut(s)	531
OliI	CACNNNNGTG	2 cut(s)	117, 520
PagI	TCATGA	1 cut(s)	1302
PaqCI	CACCTGC	1 cut(s)	1220
PciSI	GCTCTTC	2 cut(s)	311, 1313
PcsI	WCGNNNNNNNCGW	1 cut(s)	18
PctI	GAATGC	2 cut(s)	1147, 1388
PdmI	GAANNNNTTC	3 cut(s)	606, 2334, 2463
PfeI	GAWTC	7 cut(s)	268, 304, 465, 488, 1747, 1777, 2108
PflFI	GACNNNGTC	1 cut(s)	23
PleI	GAGTC	4 cut(s)	166, 1086, 1546, 1597
PluTI	GGCGCC	1 cut(s)	135
PmaCI	CACGTG	2 cut(s)	198, 247
PmlI	CACGTG	2 cut(s)	198, 247
PpsI	GAGTC	4 cut(s)	166, 1086, 1546, 1597
Ppu21I	YACGTR	2 cut(s)	198, 247
PpuMI	RGGWCCY	3 cut(s)	650, 1240, 1412
PshAI	GACNNNNGTC	2 cut(s)	176, 1464
Psp124BI	GAGCTC	2 cut(s)	150, 339
Psp5II	RGGWCCY	3 cut(s)	650, 1240, 1412
Psp6I	CCWGG	2 cut(s)	141, 2158
PspCI	CACGTG	2 cut(s)	198, 247
PspFI	CCCAGC	2 cut(s)	225, 2600
PspGI	CCWGG	2 cut(s)	141, 2158
PspN4I	GGNNCC	6 cut(s)	133, 379, 652, 661, 1241, 1413
PspPI	GGNCC	6 cut(s)	139, 343, 650, 1169, 1240, 1412
PspPPI	RGGWCCY	3 cut(s)	650, 1240, 1412
PstNI	CAGNNNCTG	1 cut(s)	2277
PsuI	RGATCY	1 cut(s)	1702
PsyI	GACNNNGTC	1 cut(s)	23
RruI	TCGCGA	1 cut(s)	531
RsaI	GTAC	8 cut(s)	725, 746, 943, 1635, 1902, 2050, 2334, 2384
RsaNI	GTAC	8 cut(s)	724, 745, 942, 1634, 1901, 2049, 2333, 2383
RseI	CAYNNNNRTG	4 cut(s)	14, 117, 520, 2538
SacI	GAGCTC	2 cut(s)	150, 339
SapI	GCTCTTC	2 cut(s)	311, 1313
SaqAI	TTAA	6 cut(s)	969, 990, 1074, 1443, 2475, 2589
Sau3AI	GATC	8 cut(s)	249, 859, 1391, 1702, 1812, 1816, 2631, 2635
Sau96I	GGNCC	6 cut(s)	139, 343, 650, 1169, 1240, 1412
ScaI	AGTACT	2 cut(s)	746, 2334
SchI	GAGTC	4 cut(s)	166, 1087, 1547, 1598
ScrFI	CCNGG	3 cut(s)	143, 240, 2160
SduI	GDGCHC	7 cut(s)	150, 203, 339, 664, 1519, 1729, 2128
SexAI	ACCWGGT	1 cut(s)	2158
SfoI	GGCGCC	1 cut(s)	133
SinI	GGWCC	4 cut(s)	343, 650, 1240, 1412
SmiMI	CAYNNNNRTG	4 cut(s)	14, 117, 520, 2538
SmlI	CTYRAG	3 cut(s)	740, 1765, 1904
SmoI	CTYRAG	3 cut(s)	740, 1765, 1904
SsiI	CCGC	7 cut(s)	123, 381, 430, 560, 573, 1064, 2122
SspDI	GGCGCC	1 cut(s)	131
SspMI	CTAG	6 cut(s)	1706, 2034, 2085, 2103, 2390, 2609
SstI	GAGCTC	2 cut(s)	150, 339
StyD4I	CCNGG	3 cut(s)	141, 238, 2158
StyI	CCWWGG	2 cut(s)	135, 654
TaaI	ACNGT	5 cut(s)	373, 803, 1374, 1653, 2279
TaiI	ACGT	6 cut(s)	27, 200, 249, 738, 1522, 1603
TaqI	TCGA	8 cut(s)	12, 170, 210, 252, 858, 1815, 2297, 2634
TaqII	GACCGA	1 cut(s)	345
TatI	WGTACW	5 cut(s)	723, 744, 1633, 2048, 2332
TauI	GCSGC	3 cut(s)	125, 383, 432
TfiI	GAWTC	7 cut(s)	268, 304, 465, 488, 1747, 1777, 2108
Tru1I	TTAA	6 cut(s)	969, 990, 1074, 1443, 2475, 2589
Tru9I	TTAA	6 cut(s)	969, 990, 1074, 1443, 2475, 2589
TscAI	CASTG	4 cut(s)	1656, 1729, 2422, 2645
TseFI	GTSAC	3 cut(s)	242, 1590, 1647
TseI	GCWGC	9 cut(s)	87, 538, 1058, 1061, 1685, 1839, 2428, 2578, 2643
Tsp45I	GTSAC	3 cut(s)	242, 1590, 1647
TspGWI	ACGGA	3 cut(s)	335, 500, 1550
TspRI	CASTG	4 cut(s)	1656, 1729, 2422, 2645
Tth111I	GACNNNGTC	1 cut(s)	23
VneI	GTGCAC	1 cut(s)	1515
VpaK11BI	GGWCC	4 cut(s)	343, 650, 1240, 1412
XagI	CCTNNNNNAGG	1 cut(s)	1466
XbaI	TCTAGA	3 cut(s)	1705, 2033, 2102
XmiI	GTMKAC	2 cut(s)	1287, 1505
XmnI	GAANNNNTTC	3 cut(s)	606, 2334, 2463
XspI	CTAG	6 cut(s)	1706, 2034, 2085, 2103, 2390, 2609
ZraI	GACGTC	1 cut(s)	25
ZrmI	AGTACT	2 cut(s)	746, 2334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.