RRP12-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G34357 |
| fragaria_vesca | FvH4_1g09210 FvH4_6g18960 |
| malus_domestica | MD02G1098900.v1.1 MD02G1099100.v1.1 MD15G1221900.v1.1 |
| prunus_persica | Prupe.6G204300_v2.0.a1 Prupe.6G204300_v2.0.a1 Prupe.6G204500_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G186700_v2.0.a1 Prupe.7G193800_v2.0.a1 |
| pyrus_communis | pycom02g07730 pycom15g19640 |
| rosa_chinensis | RchiOBHm_Chr2g0095731 |
| rosa_laevigata | RLG00000016587 RLG00000016588 |
| rosa_multiflora | Rmu_sc0001309.1_g000002 Rmu_sc0001309.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00146140 |
| rosa_rugosa | Rorug02G0052900 |
| rosa_samantha | Rh2AG101100 Rh2BG102800 Rh2CG105200 Rh2DG102600 |
| rosa_wichuraiana | Rw2G007670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 583, 3069 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2147 |
| Acc36I | ACCTGC | 3 cut(s) | 583, 2586, 3069 |
| AccB1I | GGYRCC | 2 cut(s) | 134, 380 |
| AccBSI | CCGCTC | 1 cut(s) | 1311 |
| AccI | GTMKAC | 4 cut(s) | 1290, 1508, 1991, 3628 |
| AccII | CGCG | 4 cut(s) | 100, 102, 1232, 3387 |
| AclWI | GGATC | 3 cut(s) | 17, 1713, 3291 |
| AcoI | YGGCCR | 4 cut(s) | 1863, 2533, 3599, 3645 |
| AcuI | CTGAAG | 7 cut(s) | 70, 870, 1479, 1899, 2100, 2717, 2870 |
| AcvI | CACGTG | 1 cut(s) | 250 |
| AcyI | GRCGYC | 3 cut(s) | 135, 2431, 3185 |
| AfaI | GTAC | 7 cut(s) | 749, 946, 1638, 2042, 2053, 2387, 3536 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 502, 1471 |
| AjnI | CCWGG | 8 cut(s) | 144, 189, 666, 1701, 2142, 2161, 2391, 3068 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1200, 1232 |
| AleI | CACNNNNGTG | 1 cut(s) | 523 |
| Alw21I | GWGCWC | 7 cut(s) | 153, 342, 875, 1044, 1522, 1908, 3639 |
| Alw44I | GTGCAC | 1 cut(s) | 1518 |
| AlwI | GGATC | 3 cut(s) | 17, 1713, 3291 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2280, 3509 |
| Ama87I | CYCGRG | 2 cut(s) | 391, 3166 |
| AoxI | GGCC | 9 cut(s) | 141, 217, 430, 1172, 1863, 2533, 3350, 3599, 3645 |
| ApaLI | GTGCAC | 1 cut(s) | 1518 |
| ApeKI | GCWGC | 7 cut(s) | 90, 1061, 1064, 1199, 2581, 2642, 3518 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 723, 755 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 609, 2337, 2466 |
| AspLEI | GCGC | 9 cut(s) | 68, 102, 125, 137, 774, 795, 1018, 3375, 3492 |
| AspS9I | GGNCC | 8 cut(s) | 106, 142, 346, 653, 1172, 1243, 1415, 3350 |
| AsuC2I | CCSGG | 1 cut(s) | 243 |
| AsuHPI | GGTGA | 6 cut(s) | 517, 1486, 2012, 2071, 2630, 3685 |
| AsuII | TTCGAA | 3 cut(s) | 483, 2978, 3023 |
| AsuNHI | GCTAGC | 1 cut(s) | 2611 |
| AvaI | CYCGRG | 2 cut(s) | 391, 3166 |
| AvaII | GGWCC | 5 cut(s) | 106, 346, 653, 1243, 1415 |
| AxyI | CCTNAGG | 1 cut(s) | 501 |
| BaeGI | GKGCMC | 3 cut(s) | 1522, 1732, 2131 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 936, 969 |
| BalI | TGGCCA | 3 cut(s) | 1865, 2535, 3601 |
| BanI | GGYRCC | 2 cut(s) | 134, 380 |
| BanII | GRGCYC | 3 cut(s) | 153, 342, 667 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2220, 2252 |
| BbrPI | CACGTG | 1 cut(s) | 250 |
| BbsI | GAAGAC | 6 cut(s) | 517, 521, 1427, 1467, 1942, 3020 |
| Bbv12I | GWGCWC | 7 cut(s) | 153, 342, 875, 1044, 1522, 1908, 3639 |
| BbvI | GCAGC | 7 cut(s) | 102, 1073, 1076, 1186, 2593, 2629, 3505 |
| BccI | CCATC | 7 cut(s) | 838, 908, 1330, 3328, 3341, 3362, 3507 |
| BceAI | ACGGC | 6 cut(s) | 232, 349, 371, 417, 2381, 3609 |
| BciT130I | CCWGG | 8 cut(s) | 146, 191, 668, 1703, 2144, 2163, 2393, 3070 |
| BclI | TGATCA | 3 cut(s) | 1113, 2634, 3247 |
| BcnI | CCSGG | 1 cut(s) | 243 |
| BfaI | CTAG | 9 cut(s) | 1709, 2088, 2106, 2612, 2903, 3039, 3254, 3359, 3783 |
| BfmI | CTRYAG | 1 cut(s) | 2579 |
| BfoI | RGCGCY | 2 cut(s) | 138, 3376 |
| BfuAI | ACCTGC | 3 cut(s) | 583, 2586, 3069 |
| BglII | AGATCT | 1 cut(s) | 3041 |
| BlpI | GCTNAGC | 2 cut(s) | 2656, 3074 |
| BmcAI | AGTACT | 1 cut(s) | 749 |
| Bme1390I | CCNGG | 9 cut(s) | 146, 191, 243, 668, 1703, 2144, 2163, 2393, 3070 |
| Bme18I | GGWCC | 5 cut(s) | 106, 346, 653, 1243, 1415 |
| BmeT110I | CYCGRG | 2 cut(s) | 391, 3166 |
| BmgT120I | GGNCC | 8 cut(s) | 106, 142, 346, 653, 1172, 1243, 1415, 3350 |
| BmiI | GGNNCC | 7 cut(s) | 136, 382, 655, 664, 1244, 1416, 3086 |
| BmrFI | CCNGG | 9 cut(s) | 146, 191, 243, 668, 1703, 2144, 2163, 2393, 3070 |
| BmtI | GCTAGC | 1 cut(s) | 2615 |
| BoxI | GACNNNNGTC | 2 cut(s) | 179, 1467 |
| BpiI | GAAGAC | 6 cut(s) | 517, 521, 1427, 1467, 1942, 3020 |
| BpmI | CTGGAG | 3 cut(s) | 969, 1472, 1610 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2656, 3074 |
| Bpu14I | TTCGAA | 3 cut(s) | 483, 2978, 3023 |
| BpuEI | CTTGAG | 7 cut(s) | 728, 1789, 1892, 2291, 2940, 2978, 3030 |
| BpuMI | CCSGG | 1 cut(s) | 243 |
| BsaAI | YACGTR | 1 cut(s) | 250 |
| BsaHI | GRCGYC | 3 cut(s) | 135, 2431, 3185 |
| BsaJI | CCNNGG | 9 cut(s) | 138, 144, 190, 375, 657, 666, 2805, 2886, 3708 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 662, 692 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 502, 1471 |
| Bse118I | RCCGGY | 2 cut(s) | 623, 3524 |
| Bse1I | ACTGG | 3 cut(s) | 446, 952, 2563 |
| Bse21I | CCTNAGG | 1 cut(s) | 501 |
| Bse3DI | GCAATG | 4 cut(s) | 1275, 1416, 2213, 3142 |
| BseBI | CCWGG | 8 cut(s) | 146, 191, 668, 1703, 2144, 2163, 2393, 3070 |
| BseDI | CCNNGG | 9 cut(s) | 138, 144, 190, 375, 657, 666, 2805, 2886, 3708 |
| BseGI | GGATG | 5 cut(s) | 694, 919, 3065, 3157, 3518 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 502, 1471 |
| BseMI | GCAATG | 4 cut(s) | 1275, 1416, 2213, 3142 |
| BseMII | CTCAG | 6 cut(s) | 1029, 1737, 2287, 3021, 3117, 3319 |
| BseNI | ACTGG | 3 cut(s) | 446, 952, 2563 |
| BseRI | GAGGAG | 6 cut(s) | 196, 254, 2438, 2567, 2616, 2717 |
| BseSI | GKGCMC | 3 cut(s) | 1522, 1732, 2131 |
| BseX3I | CGGCCG | 1 cut(s) | 3645 |
| BseXI | GCAGC | 7 cut(s) | 102, 1073, 1076, 1186, 2593, 2629, 3505 |
| BseYI | CCCAGC | 2 cut(s) | 228, 2603 |
| BsgI | GTGCAG | 1 cut(s) | 1744 |
| Bsh1236I | CGCG | 4 cut(s) | 100, 102, 1232, 3387 |
| Bsh1285I | CGRYCG | 2 cut(s) | 362, 3648 |
| BshFI | GGCC | 9 cut(s) | 143, 219, 432, 1174, 1865, 2535, 3352, 3601, 3647 |
| BshNI | GGYRCC | 2 cut(s) | 134, 380 |
| BsiEI | CGRYCG | 2 cut(s) | 362, 3648 |
| BsiHKAI | GWGCWC | 7 cut(s) | 153, 342, 875, 1044, 1522, 1908, 3639 |
| BsiHKCI | CYCGRG | 2 cut(s) | 391, 3166 |
| BsiSI | CCGG | 3 cut(s) | 243, 624, 3525 |
| BslFI | GGGAC | 4 cut(s) | 1256, 1428, 2291, 2429 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 502, 1471 |
| BsmBI | CGTCTC | 1 cut(s) | 394 |
| BsmFI | GGGAC | 4 cut(s) | 1256, 1428, 2291, 2429 |
| BsmI | GAATGC | 1 cut(s) | 1391 |
| BsnI | GGCC | 9 cut(s) | 143, 219, 432, 1174, 1865, 2535, 3352, 3601, 3647 |
| BsoBI | CYCGRG | 2 cut(s) | 391, 3166 |
| Bsp119I | TTCGAA | 3 cut(s) | 483, 2978, 3023 |
| Bsp1407I | TGTACA | 1 cut(s) | 1636 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2656, 3074 |
| Bsp19I | CCATGG | 1 cut(s) | 138 |
| Bsp68I | TCGCGA | 1 cut(s) | 3387 |
| BspANI | GGCC | 9 cut(s) | 143, 219, 432, 1174, 1865, 2535, 3352, 3601, 3647 |
| BspCNI | CTCAG | 6 cut(s) | 1030, 1738, 2286, 3022, 3118, 3318 |
| BspFNI | CGCG | 4 cut(s) | 100, 102, 1232, 3387 |
| BspHI | TCATGA | 1 cut(s) | 1305 |
| BspLI | GGNNCC | 7 cut(s) | 136, 382, 655, 664, 1244, 1416, 3086 |
| BspMAI | CTGCAG | 1 cut(s) | 2583 |
| BspMI | ACCTGC | 3 cut(s) | 583, 2586, 3069 |
| BspOI | GCTAGC | 1 cut(s) | 2615 |
| BspPI | GGATC | 3 cut(s) | 17, 1713, 3291 |
| BspT104I | TTCGAA | 3 cut(s) | 483, 2978, 3023 |
| BspT107I | GGYRCC | 2 cut(s) | 134, 380 |
| BsrBI | CCGCTC | 1 cut(s) | 1311 |
| BsrDI | GCAATG | 4 cut(s) | 1275, 1416, 2213, 3142 |
| BsrFI | RCCGGY | 2 cut(s) | 623, 3524 |
| BsrGI | TGTACA | 1 cut(s) | 1636 |
| BsrI | ACTGG | 3 cut(s) | 446, 952, 2563 |
| BssAI | RCCGGY | 2 cut(s) | 623, 3524 |
| BssECI | CCNNGG | 9 cut(s) | 138, 144, 190, 375, 657, 666, 2805, 2886, 3708 |
| BssNAI | GTATAC | 2 cut(s) | 1291, 1509 |
| BssNI | GRCGYC | 3 cut(s) | 135, 2431, 3185 |
| BssT1I | CCWWGG | 3 cut(s) | 138, 657, 2886 |
| Bst1107I | GTATAC | 2 cut(s) | 1291, 1509 |
| Bst2UI | CCWGG | 8 cut(s) | 146, 191, 668, 1703, 2144, 2163, 2393, 3070 |
| Bst4CI | ACNGT | 8 cut(s) | 376, 1180, 1377, 1506, 1832, 2282, 3163, 3195 |
| Bst6I | CTCTTC | 5 cut(s) | 1041, 1300, 2076, 2561, 3560 |
| BstACI | GRCGYC | 3 cut(s) | 135, 2431, 3185 |
| BstAUI | TGTACA | 1 cut(s) | 1636 |
| BstBAI | YACGTR | 1 cut(s) | 250 |
| BstBI | TTCGAA | 3 cut(s) | 483, 2978, 3023 |
| BstDSI | CCRYGG | 2 cut(s) | 138, 375 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1469 |
| BstF5I | GGATG | 5 cut(s) | 694, 919, 3065, 3157, 3518 |
| BstFNI | CGCG | 4 cut(s) | 100, 102, 1232, 3387 |
| BstH2I | RGCGCY | 2 cut(s) | 138, 3376 |
| BstHHI | GCGC | 9 cut(s) | 68, 102, 125, 137, 774, 795, 1018, 3375, 3492 |
| BstMCI | CGRYCG | 2 cut(s) | 362, 3648 |
| BstNI | CCWGG | 8 cut(s) | 146, 191, 668, 1703, 2144, 2163, 2393, 3070 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 179, 1467 |
| BstSCI | CCNGG | 9 cut(s) | 144, 189, 241, 666, 1701, 2142, 2161, 2391, 3068 |
| BstSFI | CTRYAG | 1 cut(s) | 2579 |
| BstSLI | GKGCMC | 3 cut(s) | 1522, 1732, 2131 |
| BstUI | CGCG | 4 cut(s) | 100, 102, 1232, 3387 |
| BstV1I | GCAGC | 7 cut(s) | 102, 1073, 1076, 1186, 2593, 2629, 3505 |
| BstV2I | GAAGAC | 6 cut(s) | 517, 521, 1427, 1467, 1942, 3020 |
| BstX2I | RGATCY | 3 cut(s) | 1705, 3041, 3296 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1588, 2543 |
| BstYI | RGATCY | 3 cut(s) | 1705, 3041, 3296 |
| BstZ17I | GTATAC | 2 cut(s) | 1291, 1509 |
| BstZI | CGGCCG | 1 cut(s) | 3645 |
| Bsu36I | CCTNAGG | 1 cut(s) | 501 |
| BsuRI | GGCC | 9 cut(s) | 143, 219, 432, 1174, 1865, 2535, 3352, 3601, 3647 |
| BtgI | CCRYGG | 2 cut(s) | 138, 375 |
| BtgZI | GCGATG | 1 cut(s) | 2660 |
| BtsCI | GGATG | 5 cut(s) | 694, 919, 3065, 3157, 3518 |
| BtsI | GCAGTG | 1 cut(s) | 1732 |
| BtsIMutI | CAGTG | 3 cut(s) | 1732, 1837, 2644 |
| BtuMI | TCGCGA | 1 cut(s) | 3387 |
| BveI | ACCTGC | 3 cut(s) | 583, 2586, 3069 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2280, 3509 |
| CciI | TCATGA | 1 cut(s) | 1305 |
| CciNI | GCGGCCGC | 1 cut(s) | 3645 |
| CfoI | GCGC | 9 cut(s) | 68, 102, 125, 137, 774, 795, 1018, 3375, 3492 |
| Cfr10I | RCCGGY | 2 cut(s) | 623, 3524 |
| Cfr13I | GGNCC | 8 cut(s) | 106, 142, 346, 653, 1172, 1243, 1415, 3350 |
| CseI | GACGC | 3 cut(s) | 266, 2420, 3174 |
| CsiI | ACCWGGT | 1 cut(s) | 2161 |
| Csp6I | GTAC | 7 cut(s) | 748, 945, 1637, 2041, 2052, 2386, 3535 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2905, 2940 |
| CviQI | GTAC | 7 cut(s) | 748, 945, 1637, 2041, 2052, 2386, 3535 |
| DinI | GGCGCC | 1 cut(s) | 136 |
| DraI | TTTAAA | 2 cut(s) | 3324, 3742 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2147 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2147 |
| EaeI | YGGCCR | 4 cut(s) | 1863, 2533, 3599, 3645 |
| EagI | CGGCCG | 1 cut(s) | 3645 |
| Eam1104I | CTCTTC | 5 cut(s) | 1041, 1300, 2076, 2561, 3560 |
| EarI | CTCTTC | 5 cut(s) | 1041, 1300, 2076, 2561, 3560 |
| Ecl136II | GAGCTC | 2 cut(s) | 151, 340 |
| EclXI | CGGCCG | 1 cut(s) | 3645 |
| Eco130I | CCWWGG | 3 cut(s) | 138, 657, 2886 |
| Eco24I | GRGCYC | 3 cut(s) | 153, 342, 667 |
| Eco32I | GATATC | 2 cut(s) | 2518, 3663 |
| Eco47I | GGWCC | 5 cut(s) | 106, 346, 653, 1243, 1415 |
| Eco52I | CGGCCG | 1 cut(s) | 3645 |
| Eco53kI | GAGCTC | 2 cut(s) | 151, 340 |
| Eco57I | CTGAAG | 7 cut(s) | 70, 870, 1479, 1899, 2100, 2717, 2870 |
| Eco72I | CACGTG | 1 cut(s) | 250 |
| Eco81I | CCTNAGG | 1 cut(s) | 501 |
| Eco88I | CYCGRG | 2 cut(s) | 391, 3166 |
| EcoICRI | GAGCTC | 2 cut(s) | 151, 340 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1469 |
| EcoO109I | RGGNCCY | 3 cut(s) | 653, 1243, 1415 |
| EcoRII | CCWGG | 8 cut(s) | 144, 189, 666, 1701, 2142, 2161, 2391, 3068 |
| EcoRV | GATATC | 2 cut(s) | 2518, 3663 |
| EcoT14I | CCWWGG | 3 cut(s) | 138, 657, 2886 |
| EcoT22I | ATGCAT | 1 cut(s) | 3595 |
| EcoT38I | GRGCYC | 3 cut(s) | 153, 342, 667 |
| EgeI | GGCGCC | 1 cut(s) | 136 |
| EheI | GGCGCC | 1 cut(s) | 136 |
| ErhI | CCWWGG | 3 cut(s) | 138, 657, 2886 |
| Esp3I | CGTCTC | 1 cut(s) | 394 |
| FaqI | GGGAC | 4 cut(s) | 1256, 1428, 2291, 2429 |
| FauI | CCCGC | 4 cut(s) | 503, 1225, 2555, 3741 |
| FauNDI | CATATG | 3 cut(s) | 2631, 2964, 3589 |
| FbaI | TGATCA | 3 cut(s) | 1113, 2634, 3247 |
| FblI | GTMKAC | 4 cut(s) | 1290, 1508, 1991, 3628 |
| FokI | GGATG | 5 cut(s) | 701, 926, 3052, 3164, 3525 |
| FriOI | GRGCYC | 3 cut(s) | 153, 342, 667 |
| FspBI | CTAG | 9 cut(s) | 1709, 2088, 2106, 2612, 2903, 3039, 3254, 3359, 3783 |
| GlaI | GCGC | 9 cut(s) | 67, 101, 124, 136, 773, 794, 1017, 3374, 3491 |
| GsaI | CCCAGC | 2 cut(s) | 232, 2607 |
| GsuI | CTGGAG | 3 cut(s) | 969, 1472, 1610 |
| HaeII | RGCGCY | 2 cut(s) | 138, 3376 |
| HaeIII | GGCC | 9 cut(s) | 143, 219, 432, 1174, 1865, 2535, 3352, 3601, 3647 |
| HapII | CCGG | 3 cut(s) | 243, 624, 3525 |
| HgaI | GACGC | 3 cut(s) | 266, 2420, 3174 |
| HhaI | GCGC | 9 cut(s) | 68, 102, 125, 137, 774, 795, 1018, 3375, 3492 |
| Hin1I | GRCGYC | 3 cut(s) | 135, 2431, 3185 |
| Hin6I | GCGC | 9 cut(s) | 66, 100, 123, 135, 772, 793, 1016, 3373, 3490 |
| HinP1I | GCGC | 9 cut(s) | 66, 100, 123, 135, 772, 793, 1016, 3373, 3490 |
| HincII | GTYRAC | 4 cut(s) | 372, 439, 1129, 1992 |
| HindII | GTYRAC | 4 cut(s) | 372, 439, 1129, 1992 |
| HindIII | AAGCTT | 4 cut(s) | 1108, 1210, 2894, 3578 |
| HpaII | CCGG | 3 cut(s) | 243, 624, 3525 |
| HphI | GGTGA | 6 cut(s) | 517, 1486, 2012, 2071, 2630, 3685 |
| Hpy99I | CGWCG | 9 cut(s) | 50, 53, 56, 59, 185, 218, 370, 565, 3392 |
| HpyCH4III | ACNGT | 8 cut(s) | 376, 1180, 1377, 1506, 1832, 2282, 3163, 3195 |
| HpyCH4IV | ACGT | 6 cut(s) | 249, 560, 738, 840, 1522, 1603 |
| HpySE526I | ACGT | 6 cut(s) | 249, 560, 738, 840, 1522, 1603 |
| Hsp92I | GRCGYC | 3 cut(s) | 135, 2431, 3185 |
| HspAI | GCGC | 9 cut(s) | 66, 100, 123, 135, 772, 793, 1016, 3373, 3490 |
| KasI | GGCGCC | 1 cut(s) | 134 |
| Ksp22I | TGATCA | 3 cut(s) | 1113, 2634, 3247 |
| LmnI | GCTCC | 6 cut(s) | 98, 148, 209, 337, 570, 662 |
| Lsp1109I | GCAGC | 7 cut(s) | 102, 1073, 1076, 1186, 2593, 2629, 3505 |
| MabI | ACCWGGT | 1 cut(s) | 2161 |
| MaeI | CTAG | 9 cut(s) | 1709, 2088, 2106, 2612, 2903, 3039, 3254, 3359, 3783 |
| MaeII | ACGT | 6 cut(s) | 249, 560, 738, 840, 1522, 1603 |
| MaeIII | GTNAC | 9 cut(s) | 245, 784, 1344, 1593, 1656, 1882, 1892, 1929, 2074 |
| MbiI | CCGCTC | 1 cut(s) | 1311 |
| MfeI | CAATTG | 2 cut(s) | 458, 1995 |
| MflI | RGATCY | 3 cut(s) | 1705, 3041, 3296 |
| MlsI | TGGCCA | 3 cut(s) | 1865, 2535, 3601 |
| MluNI | TGGCCA | 3 cut(s) | 1865, 2535, 3601 |
| Mly113I | GGCGCC | 1 cut(s) | 135 |
| MlyI | GAGTC | 5 cut(s) | 169, 485, 1090, 1550, 1601 |
| MmeI | TCCRAC | 3 cut(s) | 315, 816, 1540 |
| Mox20I | TGGCCA | 3 cut(s) | 1865, 2535, 3601 |
| Mph1103I | ATGCAT | 1 cut(s) | 3595 |
| MroXI | GAANNNNTTC | 3 cut(s) | 609, 2337, 2466 |
| MscI | TGGCCA | 3 cut(s) | 1865, 2535, 3601 |
| MslI | CAYNNNNRTG | 3 cut(s) | 523, 1901, 2541 |
| Msp20I | TGGCCA | 3 cut(s) | 1865, 2535, 3601 |
| MspA1I | CMGCKG | 2 cut(s) | 128, 1067 |
| MspI | CCGG | 3 cut(s) | 243, 624, 3525 |
| MspR9I | CCNGG | 9 cut(s) | 146, 191, 243, 668, 1703, 2144, 2163, 2393, 3070 |
| MunI | CAATTG | 2 cut(s) | 458, 1995 |
| Mva1269I | GAATGC | 1 cut(s) | 1391 |
| MvaI | CCWGG | 8 cut(s) | 146, 191, 668, 1703, 2144, 2163, 2393, 3070 |
| MvnI | CGCG | 4 cut(s) | 100, 102, 1232, 3387 |
| NarI | GGCGCC | 1 cut(s) | 135 |
| NciI | CCSGG | 1 cut(s) | 243 |
| NcoI | CCATGG | 1 cut(s) | 138 |
| NdeI | CATATG | 3 cut(s) | 2631, 2964, 3589 |
| NheI | GCTAGC | 1 cut(s) | 2611 |
| NlaIV | GGNNCC | 7 cut(s) | 136, 382, 655, 664, 1244, 1416, 3086 |
| NmeAIII | GCCGAG | 2 cut(s) | 2830, 3689 |
| NmuCI | GTSAC | 2 cut(s) | 245, 1593 |
| NotI | GCGGCCGC | 1 cut(s) | 3645 |
| NruI | TCGCGA | 1 cut(s) | 3387 |
| NsiI | ATGCAT | 1 cut(s) | 3595 |
| NspV | TTCGAA | 3 cut(s) | 483, 2978, 3023 |
| OliI | CACNNNNGTG | 1 cut(s) | 523 |
| PagI | TCATGA | 1 cut(s) | 1305 |
| PaqCI | CACCTGC | 2 cut(s) | 583, 3069 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 51, 54 |
| PctI | GAATGC | 1 cut(s) | 1391 |
| PdmI | GAANNNNTTC | 3 cut(s) | 609, 2337, 2466 |
| PfeI | GAWTC | 9 cut(s) | 195, 1563, 1742, 1750, 1780, 2111, 3338, 3398, 3506 |
| PfoI | TCCNGGA | 1 cut(s) | 1701 |
| PleI | GAGTC | 5 cut(s) | 169, 485, 1089, 1549, 1600 |
| PluTI | GGCGCC | 1 cut(s) | 138 |
| PmaCI | CACGTG | 1 cut(s) | 250 |
| PmlI | CACGTG | 1 cut(s) | 250 |
| PpsI | GAGTC | 5 cut(s) | 169, 485, 1089, 1549, 1600 |
| Ppu21I | YACGTR | 1 cut(s) | 250 |
| PpuMI | RGGWCCY | 3 cut(s) | 653, 1243, 1415 |
| PshAI | GACNNNNGTC | 2 cut(s) | 179, 1467 |
| Psp124BI | GAGCTC | 2 cut(s) | 153, 342 |
| Psp5II | RGGWCCY | 3 cut(s) | 653, 1243, 1415 |
| Psp6I | CCWGG | 8 cut(s) | 144, 189, 666, 1701, 2142, 2161, 2391, 3068 |
| PspCI | CACGTG | 1 cut(s) | 250 |
| PspFI | CCCAGC | 2 cut(s) | 228, 2603 |
| PspGI | CCWGG | 8 cut(s) | 144, 189, 666, 1701, 2142, 2161, 2391, 3068 |
| PspN4I | GGNNCC | 7 cut(s) | 136, 382, 655, 664, 1244, 1416, 3086 |
| PspPI | GGNCC | 8 cut(s) | 106, 142, 346, 653, 1172, 1243, 1415, 3350 |
| PspPPI | RGGWCCY | 3 cut(s) | 653, 1243, 1415 |
| PstI | CTGCAG | 1 cut(s) | 2583 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2280, 3509 |
| PsuI | RGATCY | 3 cut(s) | 1705, 3041, 3296 |
| RruI | TCGCGA | 1 cut(s) | 3387 |
| RsaI | GTAC | 7 cut(s) | 749, 946, 1638, 2042, 2053, 2387, 3536 |
| RsaNI | GTAC | 7 cut(s) | 748, 945, 1637, 2041, 2052, 2386, 3535 |
| RseI | CAYNNNNRTG | 3 cut(s) | 523, 1901, 2541 |
| SacI | GAGCTC | 2 cut(s) | 153, 342 |
| SalI | GTCGAC | 1 cut(s) | 1990 |
| Sau96I | GGNCC | 8 cut(s) | 106, 142, 346, 653, 1172, 1243, 1415, 3350 |
| ScaI | AGTACT | 1 cut(s) | 749 |
| SchI | GAGTC | 5 cut(s) | 169, 485, 1090, 1550, 1601 |
| ScrFI | CCNGG | 9 cut(s) | 146, 191, 243, 668, 1703, 2144, 2163, 2393, 3070 |
| SexAI | ACCWGGT | 1 cut(s) | 2161 |
| SfcI | CTRYAG | 1 cut(s) | 2579 |
| SfoI | GGCGCC | 1 cut(s) | 136 |
| SfuI | TTCGAA | 3 cut(s) | 483, 2978, 3023 |
| SinI | GGWCC | 5 cut(s) | 106, 346, 653, 1243, 1415 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 523, 1901, 2541 |
| SmlI | CTYRAG | 7 cut(s) | 743, 1768, 1907, 2306, 2955, 2993, 3045 |
| SmoI | CTYRAG | 7 cut(s) | 743, 1768, 1907, 2306, 2955, 2993, 3045 |
| SspDI | GGCGCC | 1 cut(s) | 134 |
| SspMI | CTAG | 9 cut(s) | 1709, 2088, 2106, 2612, 2903, 3039, 3254, 3359, 3783 |
| SstI | GAGCTC | 2 cut(s) | 153, 342 |
| StyD4I | CCNGG | 9 cut(s) | 144, 189, 241, 666, 1701, 2142, 2161, 2391, 3068 |
| StyI | CCWWGG | 3 cut(s) | 138, 657, 2886 |
| TaaI | ACNGT | 8 cut(s) | 376, 1180, 1377, 1506, 1832, 2282, 3163, 3195 |
| TaiI | ACGT | 6 cut(s) | 252, 563, 741, 843, 1525, 1606 |
| TaqI | TCGA | 8 cut(s) | 213, 483, 861, 1991, 2978, 3023, 3606, 3665 |
| TaqII | GACCGA | 1 cut(s) | 348 |
| TatI | WGTACW | 3 cut(s) | 747, 1636, 2051 |
| TauI | GCSGC | 6 cut(s) | 128, 305, 386, 3647, 3650, 3771 |
| TfiI | GAWTC | 9 cut(s) | 195, 1563, 1742, 1750, 1780, 2111, 3338, 3398, 3506 |
| TscAI | CASTG | 3 cut(s) | 1732, 1837, 2644 |
| TseFI | GTSAC | 2 cut(s) | 245, 1593 |
| TseI | GCWGC | 7 cut(s) | 90, 1061, 1064, 1199, 2581, 2642, 3518 |
| Tsp45I | GTSAC | 2 cut(s) | 245, 1593 |
| TspGWI | ACGGA | 4 cut(s) | 268, 338, 2390, 3001 |
| TspRI | CASTG | 3 cut(s) | 1732, 1837, 2644 |
| VneI | GTGCAC | 1 cut(s) | 1518 |
| VpaK11BI | GGWCC | 5 cut(s) | 106, 346, 653, 1243, 1415 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1469 |
| XbaI | TCTAGA | 3 cut(s) | 1708, 2105, 2902 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3594 |
| XmiI | GTMKAC | 4 cut(s) | 1290, 1508, 1991, 3628 |
| XmnI | GAANNNNTTC | 3 cut(s) | 609, 2337, 2466 |
| XspI | CTAG | 9 cut(s) | 1709, 2088, 2106, 2612, 2903, 3039, 3254, 3359, 3783 |
| ZrmI | AGTACT | 1 cut(s) | 749 |
| Zsp2I | ATGCAT | 1 cut(s) | 3595 |