Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007864

Physical Location & Seq

Genomic Coordinates Reverse (-)

18485301 .. 18487810

Gene Structure 2510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G194800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 837 bp

ATGTCGAGTTCATCGGAGACTCTGGAGGTTTCAGGGCAAAGAGGGTTGAGGATGGCGGAGAAGCCATCGAGCTTCACTCAGACTTGTAGCATGCTCTGCCAGTACCTCAAAGAGAAGGGCAGCTTTGGAGATCTGAGCCTTGACATGGCATGCAACATGCAACAATCCAACGGGACAGGGACACCTGAGATGTTTCATCAGAAAGCCCCACCCGTGAATTTCTTTCCATTTATGGAAAACTCAAGGAACCTGCCAGCAACTCCTGGAGACTTTAAATCCATGGATTTGTTCCCTCAACAAGCTGGTTTTGGTTCCTCAGTTCCCAGAGGAGATGTTCCCAAGATGGCTGATTCTAGTGTGAAGAAATCTGTCCCAGGAGAGCCTCAAAAGGCACAAATGACCATCTTCTATGGCGGACAAGTAATCGTGTTTGATGATTTTCCAGCAGACAAGGCAAAGGAAGTTATGCTCTTAGCAAGCAAGGAAAGTTCCCACAGCCAAGCCGCTCAGGCTTCTATTCCGGCCAAGAGTAACAATGTGTTTGCCTCTCATTTGGGCAAGAATCCAATGAATTCCAGCAGTTCAGTTCCTCCAAGTGCTAACATGTTTCCCAAGTTTGGCAATCAAGTCATTCAGGAGGCCCCTAAGCCATCGCCTCAACCCATTGTTTGTGATCTACCGATTGCAAGGAAAGCTTCACTTCACCGATTCCTGGAGAAGAGAAAGGATAGGATCAACAACAAAGCACCATACCAAACAAGCAGCCCTGCAGCCGGCCCGGCAAAGCCAGCTGAAGGAAAGTCATGGTTAGGCTTGGCTGCTCAACCAACCCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003712 GO:0003714 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009555 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009966 GO:0009987 GO:0010033 GO:0010556 GO:0010558 GO:0010605 GO:0010646 GO:0019219 GO:0019222 GO:0022414 GO:0023051 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045934 GO:0048229 GO:0048367 GO:0048519 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0080090 GO:0080134 GO:0090567 GO:0098542 GO:0140110 GO:1900067 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000022 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

CCT_2 tify

Protein Analysis

279

Amino Acids

29.96

Weight (kDa)

9.21

Isoelectric Point (pI)

51.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19180 AT1G19180 AT1G19180 AT1G74950 AT1G74950
fragaria_vesca	FvH4_1g09070 FvH4_1g09070 FvH4_1g09070
malus_domestica	MD02G1096100.v1.1 MD15G1220400.v1.1
prunus_persica	Prupe.7G194800_v2.0.a1 Prupe.7G194800_v2.0.a1
pyrus_communis	pycom02g07590 pycom15g19540
rosa_chinensis	RchiOBHm_Chr2g0095481
rosa_laevigata	RLG00000016571
rosa_multiflora	Rmu_sc0006076.1_g000009
rosa_roxburghii	Rroxscaffold_2G00146290
rosa_rugosa	Rorug02G0051500
rosa_samantha	Rh2AG099500 Rh2BG100800 Rh2CG103000 Rh2DG100400
rosa_wichuraiana	Rw2G007540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	258
AccBSI	CCGCTC	1 cut(s)	506
AciI	CCGC	3 cut(s)	56, 414, 504
AclWI	GGATC	1 cut(s)	740
AcoI	YGGCCR	1 cut(s)	522
AcsI	RAATTY	2 cut(s)	217, 571
AcuI	CTGAAG	1 cut(s)	813
AfaI	GTAC	1 cut(s)	104
AfiI	CCNNNNNNNGG	5 cut(s)	145, 617, 712, 773, 794
AflIII	ACRYGT	1 cut(s)	603
AjnI	CCWGG	3 cut(s)	262, 373, 711
AluBI	AGCT	5 cut(s)	72, 123, 302, 695, 791
AluI	AGCT	5 cut(s)	72, 123, 302, 695, 791
Alw26I	GTCTC	2 cut(s)	11, 261
AlwI	GGATC	1 cut(s)	740
AoxI	GGCC	3 cut(s)	522, 639, 775
ApeKI	GCWGC	4 cut(s)	120, 762, 770, 818
ApoI	RAATTY	2 cut(s)	217, 571
AspS9I	GGNCC	2 cut(s)	640, 776
AsuC2I	CCSGG	1 cut(s)	779
AsuHPI	GGTGA	1 cut(s)	695
BbvI	GCAGC	4 cut(s)	132, 774, 782, 805
BccI	CCATC	5 cut(s)	46, 73, 337, 410, 658
BciT130I	CCWGG	3 cut(s)	264, 375, 713
BcnI	CCSGG	1 cut(s)	779
BcoDI	GTCTC	2 cut(s)	11, 261
BfaI	CTAG	1 cut(s)	354
BfmI	CTRYAG	1 cut(s)	768
BfuAI	ACCTGC	1 cut(s)	258
BglI	GCCNNNNNGGC	2 cut(s)	509, 779
BglII	AGATCT	1 cut(s)	130
BisI	GCNGC	5 cut(s)	121, 504, 763, 771, 819
BlsI	GCNGC	5 cut(s)	122, 505, 764, 772, 820
Bme1390I	CCNGG	4 cut(s)	264, 375, 713, 779
BmgT120I	GGNCC	2 cut(s)	640, 776
BmiI	GGNNCC	3 cut(s)	248, 313, 642
BmrFI	CCNGG	4 cut(s)	264, 375, 713, 779
BplI	GAGNNNNNCTC	2 cut(s)	61, 93
BpmI	CTGGAG	3 cut(s)	44, 285, 734
Bpu10I	CCTNAGC	2 cut(s)	507, 645
BpuEI	CTTGAG	1 cut(s)	226
BpuMI	CCSGG	1 cut(s)	779
BsaJI	CCNNGG	2 cut(s)	279, 373
Bsc4I	CCNNNNNNNGG	5 cut(s)	145, 617, 712, 773, 794
Bse118I	RCCGGY	1 cut(s)	773
Bse1I	ACTGG	1 cut(s)	100
BseBI	CCWGG	3 cut(s)	264, 375, 713
BseDI	CCNNGG	2 cut(s)	279, 373
BseGI	GGATG	1 cut(s)	57
BseLI	CCNNNNNNNGG	5 cut(s)	145, 617, 712, 773, 794
BseMII	CTCAG	5 cut(s)	92, 125, 177, 330, 521
BseNI	ACTGG	1 cut(s)	100
BseRI	GAGGAG	1 cut(s)	342
BseXI	GCAGC	4 cut(s)	132, 774, 782, 805
BshFI	GGCC	3 cut(s)	524, 641, 777
BsiSI	CCGG	3 cut(s)	521, 774, 779
BslFI	GGGAC	3 cut(s)	187, 193, 356
BslI	CCNNNNNNNGG	5 cut(s)	145, 617, 712, 773, 794
BsmAI	GTCTC	2 cut(s)	11, 261
BsmFI	GGGAC	3 cut(s)	187, 193, 356
BsnI	GGCC	3 cut(s)	524, 641, 777
Bsp143I	GATC	3 cut(s)	130, 673, 732
Bsp19I	CCATGG	1 cut(s)	279
BspACI	CCGC	3 cut(s)	56, 414, 504
BspANI	GGCC	3 cut(s)	524, 641, 777
BspCNI	CTCAG	5 cut(s)	91, 126, 178, 329, 520
BspLI	GGNNCC	3 cut(s)	248, 313, 642
BspMAI	CTGCAG	1 cut(s)	772
BspMI	ACCTGC	1 cut(s)	258
BspPI	GGATC	1 cut(s)	740
BsrBI	CCGCTC	1 cut(s)	506
BsrFI	RCCGGY	1 cut(s)	773
BsrI	ACTGG	1 cut(s)	100
BssAI	RCCGGY	1 cut(s)	773
BssECI	CCNNGG	2 cut(s)	279, 373
BssMI	GATC	3 cut(s)	130, 673, 732
BssT1I	CCWWGG	1 cut(s)	279
Bst2UI	CCWGG	3 cut(s)	264, 375, 713
Bst6I	CTCTTC	1 cut(s)	713
BstAPI	GCANNNNNTGC	1 cut(s)	96
BstC8I	GCNNGC	6 cut(s)	92, 151, 255, 478, 775, 789
BstDEI	CTNAG	7 cut(s)	78, 134, 186, 316, 472, 507, 645
BstDSI	CCRYGG	1 cut(s)	279
BstF5I	GGATG	1 cut(s)	57
BstKTI	GATC	3 cut(s)	133, 676, 735
BstMAI	GTCTC	2 cut(s)	11, 261
BstMBI	GATC	3 cut(s)	130, 673, 732
BstMWI	GCNNNNNNNGC	6 cut(s)	96, 452, 509, 692, 779, 788
BstNI	CCWGG	3 cut(s)	264, 375, 713
BstNSI	RCATGY	4 cut(s)	94, 153, 160, 607
BstSCI	CCNGG	4 cut(s)	262, 373, 711, 777
BstSFI	CTRYAG	1 cut(s)	768
BstV1I	GCAGC	4 cut(s)	132, 774, 782, 805
BstX2I	RGATCY	1 cut(s)	130
BstYI	RGATCY	1 cut(s)	130
BsuRI	GGCC	3 cut(s)	524, 641, 777
BtgI	CCRYGG	1 cut(s)	279
BtgZI	GCGATG	1 cut(s)	636
BtsCI	GGATG	1 cut(s)	57
BveI	ACCTGC	1 cut(s)	258
Cac8I	GCNNGC	6 cut(s)	92, 151, 255, 478, 775, 789
Cfr10I	RCCGGY	1 cut(s)	773
Cfr13I	GGNCC	2 cut(s)	640, 776
Csp6I	GTAC	1 cut(s)	103
CviAII	CATG	7 cut(s)	91, 145, 150, 157, 280, 604, 804
CviQI	GTAC	1 cut(s)	103
DdeI	CTNAG	7 cut(s)	78, 134, 186, 316, 472, 507, 645
DpnI	GATC	3 cut(s)	132, 675, 734
DpnII	GATC	3 cut(s)	130, 673, 732
DraI	TTTAAA	1 cut(s)	274
EaeI	YGGCCR	1 cut(s)	522
Eam1104I	CTCTTC	1 cut(s)	713
EarI	CTCTTC	1 cut(s)	713
EciI	GGCGGA	2 cut(s)	71, 429
Eco130I	CCWWGG	1 cut(s)	279
Eco57I	CTGAAG	1 cut(s)	813
EcoO109I	RGGNCCY	1 cut(s)	640
EcoRI	GAATTC	1 cut(s)	571
EcoRII	CCWGG	3 cut(s)	262, 373, 711
EcoT14I	CCWWGG	1 cut(s)	279
ErhI	CCWWGG	1 cut(s)	279
FaeI	CATG	7 cut(s)	94, 148, 153, 160, 283, 607, 807
FalI	AAGNNNNNCTT	6 cut(s)	107, 139, 679, 711, 684, 716
FaqI	GGGAC	3 cut(s)	187, 193, 356
FatI	CATG	7 cut(s)	90, 144, 149, 156, 279, 603, 803
Fnu4HI	GCNGC	5 cut(s)	121, 504, 763, 771, 819
FokI	GGATG	1 cut(s)	64
Fsp4HI	GCNGC	5 cut(s)	121, 504, 763, 771, 819
FspBI	CTAG	1 cut(s)	354
GluI	GCNGC	5 cut(s)	121, 504, 763, 771, 819
GsuI	CTGGAG	3 cut(s)	44, 285, 734
HaeIII	GGCC	3 cut(s)	524, 641, 777
HapII	CCGG	3 cut(s)	521, 774, 779
Hin1II	CATG	7 cut(s)	94, 148, 153, 160, 283, 607, 807
HindIII	AAGCTT	1 cut(s)	693
HinfI	GANTC	4 cut(s)	19, 350, 562, 708
HpaII	CCGG	3 cut(s)	521, 774, 779
HphI	GGTGA	1 cut(s)	695
Hpy188I	TCNGA	4 cut(s)	16, 81, 135, 201
Hpy188III	TCNNGA	2 cut(s)	23, 635
HpyAV	CCTTC	2 cut(s)	109, 788
HpyCH4V	TGCA	4 cut(s)	153, 160, 686, 770
HpyF10VI	GCNNNNNNNGC	6 cut(s)	96, 452, 509, 692, 779, 788
HpyF3I	CTNAG	7 cut(s)	78, 134, 186, 316, 472, 507, 645
Hsp92II	CATG	7 cut(s)	94, 148, 153, 160, 283, 607, 807
KroI	GCCGGC	1 cut(s)	773
KroNI	GCCGGC	1 cut(s)	775
Kzo9I	GATC	3 cut(s)	130, 673, 732
Lsp1109I	GCAGC	4 cut(s)	132, 774, 782, 805
MaeI	CTAG	1 cut(s)	354
MaeIII	GTNAC	1 cut(s)	530
MalI	GATC	3 cut(s)	132, 675, 734
MbiI	CCGCTC	1 cut(s)	506
MboI	GATC	3 cut(s)	130, 673, 732
MboII	GAAGA	3 cut(s)	373, 397, 730
MflI	RGATCY	1 cut(s)	130
MluCI	AATT	2 cut(s)	217, 571
MlyI	GAGTC	1 cut(s)	13
MmeI	TCCRAC	1 cut(s)	192
MroNI	GCCGGC	1 cut(s)	773
MseI	TTAA	1 cut(s)	273
MspA1I	CMGCKG	1 cut(s)	791
MspI	CCGG	3 cut(s)	521, 774, 779
MspR9I	CCNGG	4 cut(s)	264, 375, 713, 779
MvaI	CCWGG	3 cut(s)	264, 375, 713
MwoI	GCNNNNNNNGC	6 cut(s)	96, 452, 509, 692, 779, 788
NaeI	GCCGGC	1 cut(s)	775
NciI	CCSGG	1 cut(s)	779
NcoI	CCATGG	1 cut(s)	279
NdeII	GATC	3 cut(s)	130, 673, 732
NgoMIV	GCCGGC	1 cut(s)	773
NlaIII	CATG	7 cut(s)	94, 148, 153, 160, 283, 607, 807
NlaIV	GGNNCC	3 cut(s)	248, 313, 642
NspI	RCATGY	4 cut(s)	94, 153, 160, 607
PaeI	GCATGC	2 cut(s)	94, 153
PciI	ACATGT	1 cut(s)	603
PdiI	GCCGGC	1 cut(s)	775
PfeI	GAWTC	3 cut(s)	350, 562, 708
PfoI	TCCNGGA	2 cut(s)	262, 711
PkrI	GCNGC	5 cut(s)	122, 505, 764, 772, 820
PleI	GAGTC	1 cut(s)	13
PpsI	GAGTC	1 cut(s)	13
PscI	ACATGT	1 cut(s)	603
Psp6I	CCWGG	3 cut(s)	262, 373, 711
PspGI	CCWGG	3 cut(s)	262, 373, 711
PspN4I	GGNNCC	3 cut(s)	248, 313, 642
PspPI	GGNCC	2 cut(s)	640, 776
PstI	CTGCAG	1 cut(s)	772
PsuI	RGATCY	1 cut(s)	130
PvuII	CAGCTG	1 cut(s)	791
RsaI	GTAC	1 cut(s)	104
RsaNI	GTAC	1 cut(s)	103
SaqAI	TTAA	1 cut(s)	273
SatI	GCNGC	5 cut(s)	121, 504, 763, 771, 819
Sau3AI	GATC	3 cut(s)	130, 673, 732
Sau96I	GGNCC	2 cut(s)	640, 776
SchI	GAGTC	1 cut(s)	13
ScrFI	CCNGG	4 cut(s)	264, 375, 713, 779
SetI	ASST	9 cut(s)	30, 74, 108, 125, 187, 252, 304, 697, 793
SfcI	CTRYAG	1 cut(s)	768
SmlI	CTYRAG	1 cut(s)	241
SmoI	CTYRAG	1 cut(s)	241
SphI	GCATGC	2 cut(s)	94, 153
Sse9I	AATT	2 cut(s)	217, 571
SsiI	CCGC	3 cut(s)	56, 414, 504
SspMI	CTAG	1 cut(s)	354
StyD4I	CCNGG	4 cut(s)	262, 373, 711, 777
StyI	CCWWGG	1 cut(s)	279
TaqI	TCGA	2 cut(s)	5, 68
TasI	AATT	2 cut(s)	217, 571
TauI	GCSGC	1 cut(s)	506
TfiI	GAWTC	3 cut(s)	350, 562, 708
Tru1I	TTAA	1 cut(s)	273
Tru9I	TTAA	1 cut(s)	273
TseI	GCWGC	4 cut(s)	120, 762, 770, 818
TspDTI	ATGAA	2 cut(s)	185, 584
XapI	RAATTY	2 cut(s)	217, 571
XceI	RCATGY	4 cut(s)	94, 153, 160, 607
XspI	CTAG	1 cut(s)	354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.