Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006564

Physical Location & Seq

Genomic Coordinates Reverse (-)

18812086 .. 18813350

Gene Structure 1265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G202000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 816 bp

ATGAGCCTGACTGTGAGGGCAAGCGGCACACTTTTCTCCCCTCAATTTTCTCGCACTTTCTCAGCTCCCAAACTCAGTCTTCTTCGCTTCTCCAAACCCTCGCCCTCGCGCTTCACCCCCAAAATCAACATGTCCTCCTCTGCCTCCGCCGCCGCCGCCCAACCCATCGTCGAGCACGTGGTGCTCTTGAAGGTCAAAGACGACACAGACCCGTCCAAGGTCAACGCGATGGTCAACAGCCTCAACGGCCTCGCCTCTCTCAACCTGACGCTCCACCTCACCGCCGGCCCACTCAACCGCACCCGATCCTCGCCCATCGCCTTCACCCATCTCCTCCACTGCCGCTACAGCACCAAAGACGACCTGAGCACCTATACTGTGCACCCGAACCACCTCAGCGTGGTCAAAGACTCGGTCCTCCCAATCTGCGACGACGTCATGGCCGTTGACTGGGTCGCCGAAGACGTTCAGGGCCCAGTGGCCCCACCGCCGGGGTCCGCAATCCGCGTGACGTTTTTGAAATTGAAGGAAAATTTGGGGGAAGAATCGAAATCTGAGATTTTGGGTGTGATTAAGGGGATTAAGGGGAAGTTTGCGGAGATTAATCAGATTAGCACAGGCGAGAACTTCTCTCCGGCGAGAGCGAAAGGGTATTCGATCGCATCGCTGGCGGTGCTTCCGGGGGTGAGTGAGTTGGAGGGTTTGGATTCGAAGCAGGAGCTGGCGAATGTGGAGAAGGACAAAGTTAAGGAGCACCTCGAAAGCGTCATCGTTTTGGATTATGTGGTGGCGTCGCCTCAATCTGCAAGTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009814 GO:0009817 GO:0010033 GO:0042221 GO:0042579 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

Dabb

Protein Analysis

272

Amino Acids

29.07

Weight (kDa)

7.79

Isoelectric Point (pI)

38.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31670
fragaria_vesca	FvH4_1g08350 FvH4_1g08360
malus_domestica	MD15G1215300.v1.1
prunus_persica	Prupe.7G202000_v2.0.a1
pyrus_communis	pycom15g19100
rosa_chinensis	RchiOBHm_Chr2g0094401
rosa_laevigata	RLG00000016490 RLG00000016491
rosa_multiflora	Rmu_sc0003819.1_g000006 Rmu_sc0003819.1_g000007 Rmu_sc0003819.1_g000008 Rmu_sc0022324.1_g000001 Rmu_sc0022325.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147150 Rroxscaffold_2G00147160
rosa_rugosa	Rorug02G0043900 Rorug02G0044000
rosa_samantha	Rh2AG091900 Rh2AG092000 Rh2BG091900 Rh2BG092000 Rh2CG094400 Rh2CG094500 Rh2DG090700 Rh2DG090800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	438
AccII	CGCG	3 cut(s)	109, 227, 507
AclWI	GGATC	1 cut(s)	300
AcoI	YGGCCR	1 cut(s)	441
AcsI	RAATTY	1 cut(s)	532
AcvI	CACGTG	1 cut(s)	178
AcyI	GRCGYC	2 cut(s)	435, 791
AdeI	CACNNNGTG	1 cut(s)	181
AfiI	CCNNNNNNNGG	5 cut(s)	217, 400, 450, 490, 491
AflIII	ACRYGT	1 cut(s)	129
AgsI	TTSAA	3 cut(s)	190, 520, 526
AjuI	GAANNNNNNNTTGG	2 cut(s)	518, 550
AluBI	AGCT	2 cut(s)	65, 721
AluI	AGCT	2 cut(s)	65, 721
Alw21I	GWGCWC	5 cut(s)	177, 186, 371, 384, 756
Alw44I	GTGCAC	1 cut(s)	380
AlwI	GGATC	1 cut(s)	300
AlwNI	CAGNNNCTG	1 cut(s)	721
AoxI	GGCC	5 cut(s)	247, 286, 441, 472, 480
ApaI	GGGCCC	1 cut(s)	476
ApaLI	GTGCAC	1 cut(s)	380
ApoI	RAATTY	1 cut(s)	532
ArsI	GACNNNNNNTTYG	2 cut(s)	399, 431
AseI	ATTAAT	1 cut(s)	603
Asp700I	GAANNNNTTC	1 cut(s)	465
AspLEI	GCGC	1 cut(s)	111
AspS9I	GGNCC	6 cut(s)	287, 415, 472, 473, 481, 495
AsuC2I	CCSGG	2 cut(s)	492, 681
AsuHPI	GGTGA	4 cut(s)	106, 271, 316, 697
AsuII	TTCGAA	1 cut(s)	710
AvaII	GGWCC	2 cut(s)	415, 495
BaeGI	GKGCMC	2 cut(s)	384, 476
BanII	GRGCYC	1 cut(s)	476
BbrPI	CACGTG	1 cut(s)	178
BbsI	GAAGAC	2 cut(s)	71, 468
Bbv12I	GWGCWC	5 cut(s)	177, 186, 371, 384, 756
BbvCI	CCTCAGC	1 cut(s)	395
BccI	CCATC	4 cut(s)	173, 223, 323, 336
BceAI	ACGGC	2 cut(s)	262, 428
BcnI	CCSGG	2 cut(s)	492, 681
BfmI	CTRYAG	1 cut(s)	346
BglI	GCCNNNNNGGC	1 cut(s)	246
BisI	GCNGC	5 cut(s)	25, 150, 153, 156, 343
BlsI	GCNGC	5 cut(s)	26, 151, 154, 157, 344
Bme1390I	CCNGG	2 cut(s)	492, 681
Bme18I	GGWCC	2 cut(s)	415, 495
BmgT120I	GGNCC	6 cut(s)	287, 415, 472, 473, 481, 495
BmiI	GGNNCC	3 cut(s)	474, 483, 496
BmrFI	CCNGG	2 cut(s)	492, 681
BmrI	ACTGGG	2 cut(s)	460, 470
BmsI	GCATC	1 cut(s)	671
BmuI	ACTGGG	2 cut(s)	460, 470
BpiI	GAAGAC	2 cut(s)	71, 468
BplI	GAGNNNNNCTC	2 cut(s)	614, 646
Bpu10I	CCTNAGC	2 cut(s)	365, 395
Bpu14I	TTCGAA	1 cut(s)	710
BpuMI	CCSGG	2 cut(s)	492, 681
BsaAI	YACGTR	1 cut(s)	178
BsaHI	GRCGYC	2 cut(s)	435, 791
BsaJI	CCNNGG	3 cut(s)	216, 491, 680
BsaXI	ACNNNNNCTCC	2 cut(s)	119, 149
Bsc4I	CCNNNNNNNGG	5 cut(s)	217, 400, 450, 490, 491
Bse118I	RCCGGY	1 cut(s)	284
Bse1I	ACTGG	2 cut(s)	455, 476
BseDI	CCNNGG	3 cut(s)	216, 491, 680
BseLI	CCNNNNNNNGG	5 cut(s)	217, 400, 450, 490, 491
BseMII	CTCAG	5 cut(s)	75, 88, 356, 409, 546
BseNI	ACTGG	2 cut(s)	455, 476
BseRI	GAGGAG	2 cut(s)	127, 323
BseSI	GKGCMC	2 cut(s)	384, 476
Bsh1236I	CGCG	3 cut(s)	109, 227, 507
Bsh1285I	CGRYCG	1 cut(s)	660
BshFI	GGCC	5 cut(s)	249, 288, 443, 474, 482
BsiEI	CGRYCG	1 cut(s)	660
BsiHKAI	GWGCWC	5 cut(s)	177, 186, 371, 384, 756
BsiSI	CCGG	4 cut(s)	285, 491, 635, 680
BslI	CCNNNNNNNGG	5 cut(s)	217, 400, 450, 490, 491
BsnI	GGCC	5 cut(s)	249, 288, 443, 474, 482
Bsp119I	TTCGAA	1 cut(s)	710
Bsp120I	GGGCCC	1 cut(s)	472
Bsp1286I	GDGCHC	6 cut(s)	177, 186, 371, 384, 476, 756
Bsp143I	GATC	2 cut(s)	305, 657
BspANI	GGCC	5 cut(s)	249, 288, 443, 474, 482
BspCNI	CTCAG	5 cut(s)	74, 87, 357, 408, 547
BspFNI	CGCG	3 cut(s)	109, 227, 507
BspLI	GGNNCC	3 cut(s)	474, 483, 496
BspPI	GGATC	1 cut(s)	300
BspT104I	TTCGAA	1 cut(s)	710
BsrFI	RCCGGY	1 cut(s)	284
BsrI	ACTGG	2 cut(s)	455, 476
BssAI	RCCGGY	1 cut(s)	284
BssECI	CCNNGG	3 cut(s)	216, 491, 680
BssMI	GATC	2 cut(s)	305, 657
BssNI	GRCGYC	2 cut(s)	435, 791
BssT1I	CCWWGG	1 cut(s)	216
Bst4CI	ACNGT	2 cut(s)	13, 379
BstACI	GRCGYC	2 cut(s)	435, 791
BstAPI	GCANNNNNTGC	1 cut(s)	181
BstBAI	YACGTR	1 cut(s)	178
BstBI	TTCGAA	1 cut(s)	710
BstC8I	GCNNGC	4 cut(s)	22, 286, 669, 723
BstDEI	CTNAG	5 cut(s)	61, 74, 365, 395, 555
BstFNI	CGCG	3 cut(s)	109, 227, 507
BstHHI	GCGC	1 cut(s)	111
BstKTI	GATC	2 cut(s)	308, 660
BstMBI	GATC	2 cut(s)	305, 657
BstMCI	CGRYCG	1 cut(s)	660
BstMWI	GCNNNNNNNGC	7 cut(s)	149, 155, 181, 246, 348, 668, 673
BstNSI	RCATGY	1 cut(s)	133
BstSCI	CCNGG	2 cut(s)	490, 679
BstSFI	CTRYAG	1 cut(s)	346
BstSLI	GKGCMC	2 cut(s)	384, 476
BstUI	CGCG	3 cut(s)	109, 227, 507
BstV2I	GAAGAC	2 cut(s)	71, 468
BsuRI	GGCC	5 cut(s)	249, 288, 443, 474, 482
BtgZI	GCGATG	3 cut(s)	242, 301, 648
BtsI	GCAGTG	1 cut(s)	337
BtsIMutI	CAGTG	2 cut(s)	337, 483
Cac8I	GCNNGC	4 cut(s)	22, 286, 669, 723
CaiI	CAGNNNCTG	1 cut(s)	721
CfoI	GCGC	1 cut(s)	111
Cfr10I	RCCGGY	1 cut(s)	284
Cfr13I	GGNCC	6 cut(s)	287, 415, 472, 473, 481, 495
CseI	GACGC	3 cut(s)	277, 754, 780
CviAII	CATG	2 cut(s)	130, 439
CviJI	RGCY	9 cut(s)	6, 65, 240, 249, 288, 443, 474, 482, 721
CviKI_1	RGCY	9 cut(s)	6, 65, 240, 249, 288, 443, 474, 482, 721
DdeI	CTNAG	5 cut(s)	61, 74, 365, 395, 555
DpnI	GATC	2 cut(s)	307, 659
DpnII	GATC	2 cut(s)	305, 657
DraIII	CACNNNGTG	1 cut(s)	181
EaeI	YGGCCR	1 cut(s)	441
EciI	GGCGGA	1 cut(s)	136
Eco130I	CCWWGG	1 cut(s)	216
Eco24I	GRGCYC	1 cut(s)	476
Eco47I	GGWCC	2 cut(s)	415, 495
Eco72I	CACGTG	1 cut(s)	178
EcoO109I	RGGNCCY	1 cut(s)	472
EcoT14I	CCWWGG	1 cut(s)	216
EcoT38I	GRGCYC	1 cut(s)	476
ErhI	CCWWGG	1 cut(s)	216
FaeI	CATG	2 cut(s)	133, 442
FaiI	YATR	4 cut(s)	131, 375, 440, 783
FatI	CATG	2 cut(s)	129, 438
Fnu4HI	GCNGC	5 cut(s)	25, 150, 153, 156, 343
FriOI	GRGCYC	1 cut(s)	476
Fsp4HI	GCNGC	5 cut(s)	25, 150, 153, 156, 343
GlaI	GCGC	1 cut(s)	110
GluI	GCNGC	5 cut(s)	25, 150, 153, 156, 343
HaeIII	GGCC	5 cut(s)	249, 288, 443, 474, 482
HapII	CCGG	4 cut(s)	285, 491, 635, 680
HgaI	GACGC	3 cut(s)	277, 754, 780
HhaI	GCGC	1 cut(s)	111
Hin1I	GRCGYC	2 cut(s)	435, 791
Hin1II	CATG	2 cut(s)	133, 442
Hin6I	GCGC	1 cut(s)	109
HinP1I	GCGC	1 cut(s)	109
HincII	GTYRAC	3 cut(s)	223, 235, 448
HindII	GTYRAC	3 cut(s)	223, 235, 448
HinfI	GANTC	3 cut(s)	410, 545, 707
HpaII	CCGG	4 cut(s)	285, 491, 635, 680
HphI	GGTGA	4 cut(s)	106, 271, 316, 697
Hpy166II	GTNNAC	4 cut(s)	223, 235, 382, 448
Hpy188I	TCNGA	3 cut(s)	556, 609, 815
Hpy188III	TCNNGA	1 cut(s)	187
Hpy8I	GTNNAC	4 cut(s)	223, 235, 382, 448
Hpy99I	CGWCG	4 cut(s)	173, 434, 437, 796
HpyAV	CCTTC	4 cut(s)	184, 331, 520, 730
HpyCH4III	ACNGT	2 cut(s)	13, 379
HpyCH4IV	ACGT	4 cut(s)	177, 435, 465, 512
HpyCH4V	TGCA	2 cut(s)	382, 806
HpyF10VI	GCNNNNNNNGC	7 cut(s)	149, 155, 181, 246, 348, 668, 673
HpyF3I	CTNAG	5 cut(s)	61, 74, 365, 395, 555
HpySE526I	ACGT	4 cut(s)	177, 435, 465, 512
Hsp92I	GRCGYC	2 cut(s)	435, 791
Hsp92II	CATG	2 cut(s)	133, 442
HspAI	GCGC	1 cut(s)	109
KroI	GCCGGC	1 cut(s)	284
KroNI	GCCGGC	1 cut(s)	286
Kzo9I	GATC	2 cut(s)	305, 657
LmnI	GCTCC	4 cut(s)	70, 276, 718, 751
LweI	GCATC	1 cut(s)	671
MaeII	ACGT	4 cut(s)	177, 435, 465, 512
MaeIII	GTNAC	1 cut(s)	508
MalI	GATC	2 cut(s)	307, 659
MboI	GATC	2 cut(s)	305, 657
MboII	GAAGA	4 cut(s)	71, 74, 473, 554
MhlI	GDGCHC	6 cut(s)	177, 186, 371, 384, 476, 756
MluCI	AATT	3 cut(s)	44, 521, 532
MlyI	GAGTC	1 cut(s)	404
MmeI	TCCRAC	1 cut(s)	675
MroNI	GCCGGC	1 cut(s)	284
MroXI	GAANNNNTTC	1 cut(s)	465
MseI	TTAA	4 cut(s)	573, 582, 603, 747
MspI	CCGG	4 cut(s)	285, 491, 635, 680
MspR9I	CCNGG	2 cut(s)	492, 681
MvnI	CGCG	3 cut(s)	109, 227, 507
MwoI	GCNNNNNNNGC	7 cut(s)	149, 155, 181, 246, 348, 668, 673
NaeI	GCCGGC	1 cut(s)	286
NciI	CCSGG	2 cut(s)	492, 681
NdeII	GATC	2 cut(s)	305, 657
NgoMIV	GCCGGC	1 cut(s)	284
NlaIII	CATG	2 cut(s)	133, 442
NlaIV	GGNNCC	3 cut(s)	474, 483, 496
NmuCI	GTSAC	1 cut(s)	508
NspI	RCATGY	1 cut(s)	133
NspV	TTCGAA	1 cut(s)	710
PciI	ACATGT	1 cut(s)	129
PcsI	WCGNNNNNNNCGW	3 cut(s)	174, 441, 462
PdiI	GCCGGC	1 cut(s)	286
PdmI	GAANNNNTTC	1 cut(s)	465
PfeI	GAWTC	2 cut(s)	545, 707
PflFI	GACNNNGTC	3 cut(s)	413, 434, 452
PkrI	GCNGC	5 cut(s)	26, 151, 154, 157, 344
Ple19I	CGATCG	1 cut(s)	660
PleI	GAGTC	1 cut(s)	404
PmaCI	CACGTG	1 cut(s)	178
PmlI	CACGTG	1 cut(s)	178
PpsI	GAGTC	1 cut(s)	404
Ppu21I	YACGTR	1 cut(s)	178
PscI	ACATGT	1 cut(s)	129
PshBI	ATTAAT	1 cut(s)	603
PspCI	CACGTG	1 cut(s)	178
PspN4I	GGNNCC	3 cut(s)	474, 483, 496
PspOMI	GGGCCC	1 cut(s)	472
PspPI	GGNCC	6 cut(s)	287, 415, 472, 473, 481, 495
PstNI	CAGNNNCTG	1 cut(s)	721
PsyI	GACNNNGTC	3 cut(s)	413, 434, 452
PvuI	CGATCG	1 cut(s)	660
SaqAI	TTAA	4 cut(s)	573, 582, 603, 747
SatI	GCNGC	5 cut(s)	25, 150, 153, 156, 343
Sau3AI	GATC	2 cut(s)	305, 657
Sau96I	GGNCC	6 cut(s)	287, 415, 472, 473, 481, 495
SchI	GAGTC	1 cut(s)	404
ScrFI	CCNGG	2 cut(s)	492, 681
SduI	GDGCHC	6 cut(s)	177, 186, 371, 384, 476, 756
SfaNI	GCATC	1 cut(s)	671
SfcI	CTRYAG	1 cut(s)	346
SfuI	TTCGAA	1 cut(s)	710
SinI	GGWCC	2 cut(s)	415, 495
Sse9I	AATT	3 cut(s)	44, 521, 532
StyD4I	CCNGG	2 cut(s)	490, 679
StyI	CCWWGG	1 cut(s)	216
TaaI	ACNGT	2 cut(s)	13, 379
TaiI	ACGT	4 cut(s)	180, 438, 468, 515
TaqI	TCGA	5 cut(s)	171, 548, 656, 710, 759
TaqII	GACCGA	1 cut(s)	403
TasI	AATT	3 cut(s)	44, 521, 532
TauI	GCSGC	5 cut(s)	27, 152, 155, 158, 345
TfiI	GAWTC	2 cut(s)	545, 707
Tru1I	TTAA	4 cut(s)	573, 582, 603, 747
Tru9I	TTAA	4 cut(s)	573, 582, 603, 747
TscAI	CASTG	2 cut(s)	344, 483
TseFI	GTSAC	1 cut(s)	508
Tsp45I	GTSAC	1 cut(s)	508
TspRI	CASTG	2 cut(s)	344, 483
Tth111I	GACNNNGTC	3 cut(s)	413, 434, 452
VneI	GTGCAC	1 cut(s)	380
VpaK11BI	GGWCC	2 cut(s)	415, 495
VspI	ATTAAT	1 cut(s)	603
XapI	RAATTY	1 cut(s)	532
XceI	RCATGY	1 cut(s)	133
XmnI	GAANNNNTTC	1 cut(s)	465
ZraI	GACGTC	1 cut(s)	436

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.