Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006564

Physical Location & Seq

Genomic Coordinates Reverse (-)

3440895 .. 3450389

Gene Structure 9495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0044000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGAATTACAAGGACACTGAGCTGACCTTGGGATTACCTGGTGGTGGAAGCCGTGGTTGTTCAACAGGTGTAGTGGTCTTCGGAGAGTTGATGAAGAGCTCGATGAAACGTGGGTTCATGGATACCGATGATGATCTCAACAACCTTGACCTGGAAAGCTCTAATGGCGAGCCTCGTGGCCAAGCTAAATTGGATGATGGGCCGTCGATGGAAGCAGCTAAGTACTCTTCCAGTAGTACCAGTACTACTGCCGTGAAAGCCCCAACTGCAAAGGGTCAAGTAGTTGGGTGGCCGCCGGTGAGATCGACGAGAAATAAGGCCTTGGCCTCGAAGAACTTGAAGAACAACAGCAGCAGTAAATATGTGAAAGTGGGTGCTGATGGAGCTCCTTACCTGCGGAAAGTAGATTTAGAGATGTATAAAAGTTACGAGGAGCTATTAACAGCCTTGGAGAAAATTTTCACTTCCTTCACCATAAACGGTAAGTACATGGAGGATGATAGGAAGCAACAGATGCTTTTTATGGAGCATGGAGTAGTGAATGGAACAGTGGAATATAATCAATATGTGCTGACATATGAAGATAAGGATAATGACTGGATGTTAGTTGGAGACGTTCCTTGGAAAATGTTTAAAGATTCGTGCAAGCGTATCCGGTTGATGAAAAGTTCAGGAGCTGCGGACTCCACCATGCTTAAGCAAATCCTGAGCAAATTCCCTCGCAAGCCAAAATCAGAGTCACTAGATTCCACCGGGAGTGATTCTGGCAACAATAGTCCCAATTTGGGCAGTGGTTTCCAATGTACAATTGGTGGGAGTTCTCTTACAAGCAAATTAAATGTTGTCAAACGAGTGTCTTCAGCTGTTTTCCCAGCAAGCATTTCAGCTGGAGCAGAGGTAGTGGAGCCTCATCTGTCTTTCAAAGAGGTTTCAAATCCACAGAAGCAGAATCTGTTTATCAGTAAGTTGAATGTTTGCTGCGAGATCATTGATTCTAGCGATCCAGCTAAGCAAGATCTTAAGCGTGAAACGTTGATTGAACTTGTTGATTTTGTTTCTTCTGGATCTGCAAAGTTTAATGAACCAGCAATATCTGCGATGTGTAAAATGTGTGCAACCAACTTGTTTAGAGTTTTCCCACCTAAGTACCGATCTAATTTTACTGGTGGTGAAACCGAAGATGAAGAACCAATGTTTGATCCTGCTTGGTCACATCTGCAAATTGTGTATGATCTACTGGTTCGGTTTATCAGTTACAATTCACTTGACATAAAGGTGGCGAAAAAGCATGTAGATCATTCTTTTATCGTACGATTACTTGACCTCTTTGATTCCGAGGACCCAAGAGAAAGAGACTGCTTGAAAACTATTCTGCATAGGATCTATGGAAAATTCATGGTGCATAGACCTTTTATACGAAAAGCTGTCAGCAATATCATCTATCGTTTTGTTTTTGAAACTGAAAGGCATAATGGTATGTCTGAGCTGTTGGAGATTTTTGGAAGTGTAATTAGCGGGTTTGCTTTGCCATTGAAGGAGGAGCACAAGATATTTTTGTGGAGGGCTCTGATTCCTCTACACAAACCAAAGTCAGTGGGAATTTATCATCAGCAATTGACATATTGCGTTGTACAGTTTATAGAGAAGGACCCGAAGTTGGCTGGCACTGTTATAAAGGGATTGTTGAAGTACTGGCCAGTAACAAATAGCCAGAAGGAGTTGATGTTTCTAAGTGAGTTAGAAGAGGTTTTGGAAATGACTAGTATGGACGAGTTCCAAAAGATCATGGTCCCTTTGTTCCGAAGAATTAGATGCTGCCTCAATAGTTCCCATTACCAGGTGGCTGAGCGAGCTCACTTGCTATGGAACAATGAGCACATCCTTAACCTTATCGGGCATAACCGCCAGGTGATTTTGCCACTTGTCTTCCCAGCTATTGAGCGAAACACCCAAAACCACTGGAATCAAGCAGTGCTCAACCTGACAATGAATGTGAGGAAGATGTTTTGCGAGATGGATGAGGAGCTGGTACTTGCCTGCCAATGTAAGTTGGAGGAGGAACATATAAAGTCAAATTCTGCAGCCGAGAAGCGAAGGTTAACATGGGAACGCTTGGAAACTGCTGCTGGCGTCCAACCTGTTGTAGCTTGTAACTTTGTAGCTCCCATCAAGCCTTCCACTTGTCCTGTTGTCTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009814 GO:0009817 GO:0010033 GO:0042221 GO:0042579 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

Dabb

Protein Analysis

732

Amino Acids

82.62

Weight (kDa)

7.99

Isoelectric Point (pI)

42.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AUX_IAA	PF02309	5 - 227	1.2e-57	AUX/IAA family
B56	PF01603	306 - 709	5.5e-172	Protein phosphatase 2A regulatory B subunit (B56 family)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31670
fragaria_vesca	FvH4_1g08350 FvH4_1g08360
malus_domestica	MD15G1215300.v1.1
prunus_persica	Prupe.7G202000_v2.0.a1
pyrus_communis	pycom15g19100
rosa_chinensis	RchiOBHm_Chr2g0094401
rosa_laevigata	RLG00000016490 RLG00000016491
rosa_multiflora	Rmu_sc0003819.1_g000006 Rmu_sc0003819.1_g000007 Rmu_sc0003819.1_g000008 Rmu_sc0022324.1_g000001 Rmu_sc0022325.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147150 Rroxscaffold_2G00147160
rosa_rugosa	Rorug02G0043900 Rorug02G0044000
rosa_samantha	Rh2AG091900 Rh2AG092000 Rh2BG091900 Rh2BG092000 Rh2CG094400 Rh2CG094500 Rh2DG090700 Rh2DG090800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1673
Acc36I	ACCTGC	1 cut(s)	402
AciI	CCGC	5 cut(s)	293, 397, 680, 1515, 1903
AclI	AACGTT	1 cut(s)	1031
AclWI	GGATC	4 cut(s)	995, 1072, 1193, 1388
AcoI	YGGCCR	3 cut(s)	178, 290, 1694
AcsI	RAATTY	5 cut(s)	456, 713, 1391, 1599, 2074
AcuI	CTGAAG	1 cut(s)	843
AcyI	GRCGYC	1 cut(s)	2130
AfiI	CCNNNNNNNGG	5 cut(s)	44, 151, 785, 1657, 1837
AflII	CTTAAG	2 cut(s)	695, 1019
AhlI	ACTAGT	1 cut(s)	1760
AjnI	CCWGG	4 cut(s)	37, 150, 1836, 1905
Alw21I	GWGCWC	6 cut(s)	101, 388, 1545, 1855, 1878, 1977
Alw26I	GTCTC	2 cut(s)	606, 1347
AlwI	GGATC	4 cut(s)	995, 1072, 1193, 1388
AlwNI	CAGNNNCTG	2 cut(s)	677, 952
AoxI	GGCC	6 cut(s)	178, 200, 290, 318, 324, 1694
ApeKI	GCWGC	7 cut(s)	215, 351, 677, 978, 1815, 2081, 2123
ApoI	RAATTY	5 cut(s)	456, 713, 1391, 1599, 2074
ArsI	GACNNNNNNTTYG	2 cut(s)	722, 754
Asp700I	GAANNNNTTC	1 cut(s)	458
AspS9I	GGNCC	4 cut(s)	200, 1339, 1648, 1789
AsuC2I	CCSGG	1 cut(s)	754
AsuHPI	GGTGA	4 cut(s)	310, 463, 1181, 1921
AvaII	GGWCC	3 cut(s)	1339, 1648, 1789
BaeI	ACNNNNGTAYC	2 cut(s)	1130, 1163
BalI	TGGCCA	2 cut(s)	180, 1696
BanII	GRGCYC	4 cut(s)	101, 388, 1567, 1855
BauI	CACGAG	1 cut(s)	174
BbsI	GAAGAC	3 cut(s)	70, 849, 1918
Bbv12I	GWGCWC	6 cut(s)	101, 388, 1545, 1855, 1878, 1977
BbvI	GCAGC	7 cut(s)	227, 363, 664, 965, 1802, 2093, 2110
BccI	CCATC	5 cut(s)	191, 202, 374, 2008, 2174
BceAI	ACGGC	3 cut(s)	36, 187, 236
BciT130I	CCWGG	4 cut(s)	39, 152, 1838, 1907
BciVI	GTATCC	2 cut(s)	115, 662
BcnI	CCSGG	1 cut(s)	754
BcoDI	GTCTC	2 cut(s)	606, 1347
BcuI	ACTAGT	1 cut(s)	1760
BfaI	CTAG	3 cut(s)	743, 996, 1761
BfmI	CTRYAG	1 cut(s)	2079
BfrI	CTTAAG	2 cut(s)	695, 1019
BfuAI	ACCTGC	1 cut(s)	402
BfuI	GTATCC	2 cut(s)	115, 662
BglII	AGATCT	1 cut(s)	1015
BisI	GCNGC	8 cut(s)	216, 293, 352, 678, 979, 1816, 2082, 2124
BlpI	GCTNAGC	2 cut(s)	1008, 1845
BlsI	GCNGC	8 cut(s)	217, 294, 353, 679, 980, 1817, 2083, 2125
BmcAI	AGTACT	3 cut(s)	224, 244, 1691
Bme1390I	CCNGG	5 cut(s)	39, 152, 754, 1838, 1907
Bme18I	GGWCC	3 cut(s)	1339, 1648, 1789
BmgT120I	GGNCC	4 cut(s)	200, 1339, 1648, 1789
BmiI	GGNNCC	4 cut(s)	906, 1341, 1650, 1791
BmrFI	CCNGG	5 cut(s)	39, 152, 754, 1838, 1907
BmsI	GCATC	2 cut(s)	504, 1802
BpiI	GAAGAC	3 cut(s)	70, 849, 1918
BpmI	CTGGAG	1 cut(s)	909
Bpu10I	CCTNAGC	1 cut(s)	707
Bpu1102I	GCTNAGC	2 cut(s)	1008, 1845
BpuMI	CCSGG	1 cut(s)	754
BsaBI	GATNNNNATC	1 cut(s)	132
BsaHI	GRCGYC	1 cut(s)	2130
BsaJI	CCNNGG	6 cut(s)	27, 52, 321, 447, 620, 1335
BsaWI	WCCGGW	1 cut(s)	654
BsaXI	ACNNNNNCTCC	4 cut(s)	882, 912, 1709, 1739
Bsc4I	CCNNNNNNNGG	5 cut(s)	44, 151, 785, 1657, 1837
Bse118I	RCCGGY	1 cut(s)	295
Bse1I	ACTGG	8 cut(s)	231, 240, 602, 1168, 1242, 1697, 1697, 1964
Bse8I	GATNNNNATC	1 cut(s)	132
BseBI	CCWGG	4 cut(s)	39, 152, 1838, 1907
BseDI	CCNNGG	6 cut(s)	27, 52, 321, 447, 620, 1335
BseGI	GGATG	5 cut(s)	199, 502, 606, 1878, 2023
BseJI	GATNNNNATC	1 cut(s)	132
BseLI	CCNNNNNNNGG	5 cut(s)	44, 151, 785, 1657, 1837
BseMII	CTCAG	4 cut(s)	9, 698, 1473, 1836
BseNI	ACTGG	8 cut(s)	231, 240, 602, 1168, 1242, 1697, 1697, 1964
BseRI	GAGGAG	4 cut(s)	446, 1553, 2036, 2069
BseXI	GCAGC	7 cut(s)	227, 363, 664, 965, 1802, 2093, 2110
BseYI	CCCAGC	2 cut(s)	871, 1930
BshFI	GGCC	6 cut(s)	180, 202, 292, 320, 326, 1696
BsiHKAI	GWGCWC	6 cut(s)	101, 388, 1545, 1855, 1878, 1977
BsiSI	CCGG	3 cut(s)	296, 655, 753
BsiWI	CGTACG	1 cut(s)	1309
BslFI	GGGAC	2 cut(s)	762, 1775
BslI	CCNNNNNNNGG	5 cut(s)	44, 151, 785, 1657, 1837
BsmAI	GTCTC	2 cut(s)	606, 1347
BsmBI	CGTCTC	1 cut(s)	606
BsmFI	GGGAC	2 cut(s)	762, 1775
BsnI	GGCC	6 cut(s)	180, 202, 292, 320, 326, 1696
Bsp1286I	GDGCHC	7 cut(s)	101, 388, 1545, 1567, 1855, 1878, 1977
Bsp1407I	TGTACA	2 cut(s)	803, 1630
Bsp1720I	GCTNAGC	2 cut(s)	1008, 1845
BspACI	CCGC	5 cut(s)	293, 397, 680, 1515, 1903
BspANI	GGCC	6 cut(s)	180, 202, 292, 320, 326, 1696
BspCNI	CTCAG	4 cut(s)	10, 699, 1474, 1837
BspLI	GGNNCC	4 cut(s)	906, 1341, 1650, 1791
BspMAI	CTGCAG	1 cut(s)	2083
BspMI	ACCTGC	1 cut(s)	402
BspPI	GGATC	4 cut(s)	995, 1072, 1193, 1388
BspQI	GCTCTTC	1 cut(s)	89
BspTI	CTTAAG	2 cut(s)	695, 1019
BsrFI	RCCGGY	1 cut(s)	295
BsrGI	TGTACA	2 cut(s)	803, 1630
BsrI	ACTGG	8 cut(s)	231, 240, 602, 1168, 1242, 1697, 1697, 1964
BssAI	RCCGGY	1 cut(s)	295
BssECI	CCNNGG	6 cut(s)	27, 52, 321, 447, 620, 1335
BssNI	GRCGYC	1 cut(s)	2130
BssSI	CACGAG	1 cut(s)	174
BssT1I	CCWWGG	4 cut(s)	27, 321, 447, 620
Bst2BI	CACGAG	1 cut(s)	174
Bst2UI	CCWGG	4 cut(s)	39, 152, 1838, 1907
Bst4CI	ACNGT	4 cut(s)	482, 550, 1635, 1669
Bst6I	CTCTTC	3 cut(s)	89, 232, 1737
BstACI	GRCGYC	1 cut(s)	2130
BstAFI	CTTAAG	2 cut(s)	695, 1019
BstAPI	GCANNNNNTGC	2 cut(s)	514, 1094
BstAUI	TGTACA	2 cut(s)	803, 1630
BstC8I	GCNNGC	8 cut(s)	170, 647, 725, 877, 1663, 1851, 2038, 2128
BstDEI	CTNAG	8 cut(s)	18, 219, 707, 1008, 1143, 1482, 1730, 1845
BstDSI	CCRYGG	1 cut(s)	52
BstF5I	GGATG	5 cut(s)	199, 502, 606, 1878, 2023
BstMAI	GTCTC	2 cut(s)	606, 1347
BstMWI	GCNNNNNNNGC	7 cut(s)	165, 257, 266, 383, 514, 1094, 1850
BstNI	CCWGG	4 cut(s)	39, 152, 1838, 1907
BstNSI	RCATGY	1 cut(s)	1292
BstSCI	CCNGG	5 cut(s)	37, 150, 752, 1836, 1905
BstSFI	CTRYAG	1 cut(s)	2079
BstV1I	GCAGC	7 cut(s)	227, 363, 664, 965, 1802, 2093, 2110
BstV2I	GAAGAC	3 cut(s)	70, 849, 1918
BstX2I	RGATCY	3 cut(s)	1015, 1064, 1380
BstYI	RGATCY	3 cut(s)	1015, 1064, 1380
BsuI	GTATCC	2 cut(s)	115, 662
BsuRI	GGCC	6 cut(s)	180, 202, 292, 320, 326, 1696
BtgI	CCRYGG	1 cut(s)	52
BtgZI	GCGATG	1 cut(s)	1112
BtsCI	GGATG	5 cut(s)	199, 502, 606, 1878, 2023
BtsI	GCAGTG	2 cut(s)	796, 1977
BtsIMutI	CAGTG	7 cut(s)	15, 555, 796, 1599, 1665, 1957, 1977
BveI	ACCTGC	1 cut(s)	402
Cac8I	GCNNGC	8 cut(s)	170, 647, 725, 877, 1663, 1851, 2038, 2128
CaiI	CAGNNNCTG	2 cut(s)	677, 952
Cfr10I	RCCGGY	1 cut(s)	295
Cfr13I	GGNCC	4 cut(s)	200, 1339, 1648, 1789
CseI	GACGC	1 cut(s)	2119
CsiI	ACCWGGT	2 cut(s)	37, 1836
CspCI	CAANNNNNGTGG	2 cut(s)	1575, 1610
CviAII	CATG	8 cut(s)	118, 490, 530, 691, 1289, 1396, 1786, 2103
DdeI	CTNAG	8 cut(s)	18, 219, 707, 1008, 1143, 1482, 1730, 1845
DraI	TTTAAA	1 cut(s)	634
EaeI	YGGCCR	3 cut(s)	178, 290, 1694
Eam1104I	CTCTTC	3 cut(s)	89, 232, 1737
EarI	CTCTTC	3 cut(s)	89, 232, 1737
Ecl136II	GAGCTC	3 cut(s)	99, 386, 1853
Eco130I	CCWWGG	4 cut(s)	27, 321, 447, 620
Eco147I	AGGCCT	1 cut(s)	320
Eco24I	GRGCYC	4 cut(s)	101, 388, 1567, 1855
Eco47I	GGWCC	3 cut(s)	1339, 1648, 1789
Eco53kI	GAGCTC	3 cut(s)	99, 386, 1853
Eco57I	CTGAAG	1 cut(s)	843
EcoICRI	GAGCTC	3 cut(s)	99, 386, 1853
EcoO109I	RGGNCCY	2 cut(s)	1339, 1648
EcoRII	CCWGG	4 cut(s)	37, 150, 1836, 1905
EcoT14I	CCWWGG	4 cut(s)	27, 321, 447, 620
EcoT38I	GRGCYC	4 cut(s)	101, 388, 1567, 1855
ErhI	CCWWGG	4 cut(s)	27, 321, 447, 620
Esp3I	CGTCTC	1 cut(s)	606
FaeI	CATG	8 cut(s)	121, 493, 533, 694, 1292, 1399, 1789, 2106
FaqI	GGGAC	2 cut(s)	762, 1775
FatI	CATG	8 cut(s)	117, 489, 529, 690, 1288, 1395, 1785, 2102
FauI	CCCGC	1 cut(s)	1508
FauNDI	CATATG	1 cut(s)	577
Fnu4HI	GCNGC	8 cut(s)	216, 293, 352, 678, 979, 1816, 2082, 2124
FokI	GGATG	5 cut(s)	206, 509, 613, 1865, 2030
FriOI	GRGCYC	4 cut(s)	101, 388, 1567, 1855
Fsp4HI	GCNGC	8 cut(s)	216, 293, 352, 678, 979, 1816, 2082, 2124
FspBI	CTAG	3 cut(s)	743, 996, 1761
GluI	GCNGC	8 cut(s)	216, 293, 352, 678, 979, 1816, 2082, 2124
GsaI	CCCAGC	2 cut(s)	875, 1934
GsuI	CTGGAG	1 cut(s)	909
HaeIII	GGCC	6 cut(s)	180, 202, 292, 320, 326, 1696
HapII	CCGG	3 cut(s)	296, 655, 753
HgaI	GACGC	1 cut(s)	2119
Hin1I	GRCGYC	1 cut(s)	2130
Hin1II	CATG	8 cut(s)	121, 493, 533, 694, 1292, 1399, 1789, 2106
HincII	GTYRAC	1 cut(s)	2100
HindII	GTYRAC	1 cut(s)	2100
HpaI	GTTAAC	1 cut(s)	2100
HpaII	CCGG	3 cut(s)	296, 655, 753
HphI	GGTGA	4 cut(s)	310, 463, 1181, 1921
Hpy166II	GTNNAC	1 cut(s)	2100
Hpy188I	TCNGA	6 cut(s)	83, 736, 1336, 1483, 1569, 1802
Hpy188III	TCNNGA	3 cut(s)	672, 706, 1062
Hpy8I	GTNNAC	1 cut(s)	2100
Hpy99I	CGWCG	2 cut(s)	208, 310
HpyAV	CCTTC	6 cut(s)	478, 1528, 1639, 1708, 2088, 2184
HpyCH4III	ACNGT	4 cut(s)	482, 550, 1635, 1669
HpyCH4IV	ACGT	3 cut(s)	109, 615, 1031
HpyCH4V	TGCA	8 cut(s)	269, 645, 1070, 1115, 1219, 1375, 1402, 2081
HpyF10VI	GCNNNNNNNGC	7 cut(s)	165, 257, 266, 383, 514, 1094, 1850
HpyF3I	CTNAG	8 cut(s)	18, 219, 707, 1008, 1143, 1482, 1730, 1845
HpySE526I	ACGT	3 cut(s)	109, 615, 1031
Hsp92I	GRCGYC	1 cut(s)	2130
Hsp92II	CATG	8 cut(s)	121, 493, 533, 694, 1292, 1399, 1789, 2106
KspAI	GTTAAC	1 cut(s)	2100
LguI	GCTCTTC	1 cut(s)	89
Lsp1109I	GCAGC	7 cut(s)	227, 363, 664, 965, 1802, 2093, 2110
LweI	GCATC	2 cut(s)	504, 1802
MabI	ACCWGGT	2 cut(s)	37, 1836
MaeI	CTAG	3 cut(s)	743, 996, 1761
MaeII	ACGT	3 cut(s)	109, 615, 1031
MaeIII	GTNAC	6 cut(s)	425, 738, 1209, 1253, 1699, 2150
MfeI	CAATTG	2 cut(s)	807, 1613
MflI	RGATCY	3 cut(s)	1015, 1064, 1380
MhlI	GDGCHC	7 cut(s)	101, 388, 1545, 1567, 1855, 1878, 1977
MlsI	TGGCCA	2 cut(s)	180, 1696
MluNI	TGGCCA	2 cut(s)	180, 1696
MlyI	GAGTC	2 cut(s)	677, 746
MmeI	TCCRAC	4 cut(s)	589, 1470, 2031, 2158
Mox20I	TGGCCA	2 cut(s)	180, 1696
MroXI	GAANNNNTTC	1 cut(s)	458
MscI	TGGCCA	2 cut(s)	180, 1696
MseI	TTAA	8 cut(s)	440, 633, 696, 836, 1020, 1077, 1884, 2099
MslI	CAYNNNNRTG	1 cut(s)	1274
Msp20I	TGGCCA	2 cut(s)	180, 1696
MspA1I	CMGCKG	2 cut(s)	863, 887
MspCI	CTTAAG	2 cut(s)	695, 1019
MspI	CCGG	3 cut(s)	296, 655, 753
MspR9I	CCNGG	5 cut(s)	39, 152, 754, 1838, 1907
MunI	CAATTG	2 cut(s)	807, 1613
MvaI	CCWGG	4 cut(s)	39, 152, 1838, 1907
MwoI	GCNNNNNNNGC	7 cut(s)	165, 257, 266, 383, 514, 1094, 1850
NciI	CCSGG	1 cut(s)	754
NdeI	CATATG	1 cut(s)	577
NlaIII	CATG	8 cut(s)	121, 493, 533, 694, 1292, 1399, 1789, 2106
NlaIV	GGNNCC	4 cut(s)	906, 1341, 1650, 1791
NmeAIII	GCCGAG	1 cut(s)	2110
NmuCI	GTSAC	2 cut(s)	738, 1209
NspI	RCATGY	1 cut(s)	1292
PceI	AGGCCT	1 cut(s)	320
PciSI	GCTCTTC	1 cut(s)	89
PdmI	GAANNNNTTC	1 cut(s)	458
PfeI	GAWTC	8 cut(s)	638, 746, 761, 949, 992, 1331, 1570, 1963
Pfl23II	CGTACG	1 cut(s)	1309
PkrI	GCNGC	8 cut(s)	217, 294, 353, 679, 980, 1817, 2083, 2125
PleI	GAGTC	2 cut(s)	677, 745
PpsI	GAGTC	2 cut(s)	677, 745
PpuMI	RGGWCCY	2 cut(s)	1339, 1648
PsiI	TTATAA	1 cut(s)	1673
Psp124BI	GAGCTC	3 cut(s)	101, 388, 1855
Psp1406I	AACGTT	1 cut(s)	1031
Psp5II	RGGWCCY	2 cut(s)	1339, 1648
Psp6I	CCWGG	4 cut(s)	37, 150, 1836, 1905
PspFI	CCCAGC	2 cut(s)	871, 1930
PspGI	CCWGG	4 cut(s)	37, 150, 1836, 1905
PspLI	CGTACG	1 cut(s)	1309
PspN4I	GGNNCC	4 cut(s)	906, 1341, 1650, 1791
PspPI	GGNCC	4 cut(s)	200, 1339, 1648, 1789
PspPPI	RGGWCCY	2 cut(s)	1339, 1648
PstI	CTGCAG	1 cut(s)	2083
PstNI	CAGNNNCTG	2 cut(s)	677, 952
PsuI	RGATCY	3 cut(s)	1015, 1064, 1380
PvuII	CAGCTG	2 cut(s)	863, 887
RseI	CAYNNNNRTG	1 cut(s)	1274
SacI	GAGCTC	3 cut(s)	101, 388, 1855
SapI	GCTCTTC	1 cut(s)	89
SaqAI	TTAA	8 cut(s)	440, 633, 696, 836, 1020, 1077, 1884, 2099
SatI	GCNGC	8 cut(s)	216, 293, 352, 678, 979, 1816, 2082, 2124
Sau96I	GGNCC	4 cut(s)	200, 1339, 1648, 1789
ScaI	AGTACT	3 cut(s)	224, 244, 1691
SchI	GAGTC	2 cut(s)	677, 746
ScrFI	CCNGG	5 cut(s)	39, 152, 754, 1838, 1907
SduI	GDGCHC	7 cut(s)	101, 388, 1545, 1567, 1855, 1878, 1977
SexAI	ACCWGGT	2 cut(s)	37, 1836
SfaNI	GCATC	2 cut(s)	504, 1802
SfcI	CTRYAG	1 cut(s)	2079
SgrAI	CRCCGGYG	1 cut(s)	295
SinI	GGWCC	3 cut(s)	1339, 1648, 1789
SmiMI	CAYNNNNRTG	1 cut(s)	1274
SmlI	CTYRAG	2 cut(s)	695, 1019
SmoI	CTYRAG	2 cut(s)	695, 1019
SpeI	ACTAGT	1 cut(s)	1760
SseBI	AGGCCT	1 cut(s)	320
SsiI	CCGC	5 cut(s)	293, 397, 680, 1515, 1903
SspMI	CTAG	3 cut(s)	743, 996, 1761
SstI	GAGCTC	3 cut(s)	101, 388, 1855
StuI	AGGCCT	1 cut(s)	320
StyD4I	CCNGG	5 cut(s)	37, 150, 752, 1836, 1905
StyI	CCWWGG	4 cut(s)	27, 321, 447, 620
TaaI	ACNGT	4 cut(s)	482, 550, 1635, 1669
TaiI	ACGT	3 cut(s)	112, 618, 1034
TaqI	TCGA	4 cut(s)	101, 206, 305, 329
TatI	WGTACW	6 cut(s)	222, 242, 486, 803, 1630, 1689
TauI	GCSGC	1 cut(s)	295
TfiI	GAWTC	8 cut(s)	638, 746, 761, 949, 992, 1331, 1570, 1963
Tru1I	TTAA	8 cut(s)	440, 633, 696, 836, 1020, 1077, 1884, 2099
Tru9I	TTAA	8 cut(s)	440, 633, 696, 836, 1020, 1077, 1884, 2099
TscAI	CASTG	7 cut(s)	22, 555, 796, 1599, 1672, 1964, 1977
TseFI	GTSAC	2 cut(s)	738, 1209
TseI	GCWGC	7 cut(s)	215, 351, 677, 978, 1815, 2081, 2123
Tsp45I	GTSAC	2 cut(s)	738, 1209
TspRI	CASTG	7 cut(s)	22, 555, 796, 1599, 1672, 1964, 1977
Vha464I	CTTAAG	2 cut(s)	695, 1019
VpaK11BI	GGWCC	3 cut(s)	1339, 1648, 1789
XapI	RAATTY	5 cut(s)	456, 713, 1391, 1599, 2074
XceI	RCATGY	1 cut(s)	1292
XcmI	CCANNNNNNNNNTGG	1 cut(s)	806
XmnI	GAANNNNTTC	1 cut(s)	458
XspI	CTAG	3 cut(s)	743, 996, 1761
ZrmI	AGTACT	3 cut(s)	224, 244, 1691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.