Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0005381

Physical Location & Seq

Genomic Coordinates Forward (+)

19423813 .. 19425546

Gene Structure 1734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G213800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGGCTATAGAGATTGAGCAGCCTTCTGTTGGGCTATCAAAAATAGCTGTTTCTGATACTCATGGAGAAGACTCACCATACTTTGCAGGCTGGAAAGCATATGATGAAAACCCATATAATGAATCAAGCAATCCATCTGGAGTTATACAGATGGGACTTGCAGAGAATCAAGTTTCATTTGATCTGTTGGAAAAGTACTTGGAAGAGCATTCAGAATCTTCAAACTTGGGATCAAAAGGAGTGTCTGGCTTTAGAGAGAATGCTTTGTTTCAAGATTACCATGGACTTTTGTCTTTCAGAAAGGCAATGGCAAGTTTCATGGAACAAATTAGAGGAGGAAGAGCCAAATTTGACCCTGATAGGGTAGTCTTAACAGCAGGTGCAACTGCCGCCAATGAGCTCTTAACTTTCATTATAGCTGATCCTGGTGATGCTTTGCTTGTTCCAACCCCATACTATCCAGGATTTGATAGAGATTTAAGGTGGAGGACTGGGGTGAACATTGTGCCAATCCACACTGATAGCTCAAACAACTTTCAGGTTACTCCTCAAGCTTTAGAAGCTGCATACAAAGAAGCAGAAGCCAAGACCATGAGAGTGAGAGGGGTACTAATCACAAATCCTTCAAACCCATTAGGTGCAACAATCCAAAGACAAGTCCTTGAACAGATTCTTGATTTTGTCACCCGAAAAAACATCCATCTTGTCTCCGATGAAATCTACTCGGGATCCGCCTTCTCATCCTCCGAATTCATAAGCGTTGCAGAGATTCTTGAATCCCAGCAGTACAAGAACTCAGAAAGAGTTCACATAGTTTATAGCCTTTCCAAAGACCTTGGCCTTCCGGGCTTTAGAGTTGGCACCGTGTACTCATACAACGACAAGGTTGTAACAACAGCAAGAAGGATGTCAAGCTTCACCTTAATATCTTCTCAAACACAACATCTCTTAGCTTCCATGTTGTCTGACAAGGAATTCACTGAAAACTACATAAAGACAAACAGAGAGAGACTGAGGAAGCGATACGATCTGATCATTGAAGGATTAAAGAAAGCCGGGATTGAGTGTTTGAAAGGAAATGCTGGGTTGTTTTGCTGGATGAATTTAAGTCCATTTTTGGATGAACCAACAAGAGAAGGTGAGCTGACTCTTTGGAATTCTATAATGCATGAAGTGAAGCTAAACATTTCTCCAGGTTCGTCCTGTCAATGCTCTGAACCAGGTTGGTTTAGGGTGTGCTTTGCTAACATGAGTGAGCAAACACTTGAAGTTGCATTGACAAGAATACATAATTTCATGGAGAAAAAAGAGAGAGCTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0006082 GO:0006520 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009692 GO:0009693 GO:0009987 GO:0010817 GO:0016053 GO:0016829 GO:0016846 GO:0016847 GO:0018871 GO:0019752 GO:0032787 GO:0042218 GO:0042445 GO:0042446 GO:0042802 GO:0043436 GO:0043449 GO:0043450 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1900673 GO:1900674 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 ko01110 map00270 map01100 map01110

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

441

Amino Acids

49.31

Weight (kDa)

5.53

Isoelectric Point (pI)

47.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005381)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26200
fragaria_vesca	FvH4_1g06950 FvH4_1g06950 FvH4_1g06950 FvH4_1g06950 FvH4_1g06950
malus_domestica	MD02G1073800.v1.1 MD02G1073900.v1.1 MD15G1203500.v1.1
prunus_persica	Prupe.7G213800_v2.0.a1 Prupe.7G213900_v2.0.a1
pyrus_communis	pycom02g05820 pycom02g05830 pycom15g18050
rosa_chinensis	RchiOBHm_Chr2g0092901 RchiOBHm_Chr2g0092911
rosa_laevigata	RLG00000016344 RLG00000016346
rosa_multiflora	Rmu_sc0000965.1_g000001 Rmu_sc0014880.1_g000003 Rmu_sc0022236.1_g000001
rosa_rugosa	Rorug02G0030000
rosa_samantha	Rh2AG075800 Rh2AG075900 Rh2BG077200 Rh2CG079500 Rh2DG074600
rosa_wichuraiana	Rw2G007020 Rw2G007030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	368
Acc36I	ACCTGC	1 cut(s)	368
AccB1I	GGYRCC	1 cut(s)	860
AciI	CCGC	2 cut(s)	390, 732
AclWI	GGATC	4 cut(s)	238, 416, 723, 736
AcsI	RAATTY	5 cut(s)	347, 749, 974, 1102, 1156
AfaI	GTAC	4 cut(s)	197, 609, 788, 869
AfiI	CCNNNNNNNGG	2 cut(s)	29, 361
AgsI	TTSAA	8 cut(s)	222, 272, 627, 665, 776, 1040, 1072, 1268
AjnI	CCWGG	4 cut(s)	424, 460, 1192, 1219
Alw21I	GWGCWC	1 cut(s)	402
Alw26I	GTCTC	2 cut(s)	712, 1003
AlwI	GGATC	4 cut(s)	238, 416, 723, 736
Ama87I	CYCGRG	1 cut(s)	724
AoxI	GGCC	1 cut(s)	838
ApeKI	GCWGC	2 cut(s)	19, 563
ApoI	RAATTY	5 cut(s)	347, 749, 974, 1102, 1156
ArsI	GACNNNNNNTTYG	2 cut(s)	227, 259
Asp700I	GAANNNNTTC	2 cut(s)	669, 804
AsuC2I	CCSGG	2 cut(s)	846, 1057
AsuHPI	GGTGA	6 cut(s)	66, 440, 508, 676, 910, 1151
AsuNHI	GCTAGC	1 cut(s)	1316
AvaI	CYCGRG	1 cut(s)	724
BamHI	GGATCC	1 cut(s)	728
BanI	GGYRCC	1 cut(s)	860
BanII	GRGCYC	1 cut(s)	402
BbsI	GAAGAC	1 cut(s)	75
Bbv12I	GWGCWC	1 cut(s)	402
BbvI	GCAGC	2 cut(s)	31, 550
BccI	CCATC	3 cut(s)	142, 145, 708
BciT130I	CCWGG	4 cut(s)	426, 462, 1194, 1221
BclI	TGATCA	1 cut(s)	1032
BcnI	CCSGG	2 cut(s)	846, 1057
BcoDI	GTCTC	2 cut(s)	712, 1003
BfaI	CTAG	2 cut(s)	1317, 1321
BfmI	CTRYAG	1 cut(s)	6
BfuAI	ACCTGC	1 cut(s)	368
BglI	GCCNNNNNGGC	1 cut(s)	846
BisI	GCNGC	3 cut(s)	20, 390, 564
BlsI	GCNGC	3 cut(s)	21, 391, 565
BmcAI	AGTACT	1 cut(s)	197
Bme1390I	CCNGG	6 cut(s)	426, 462, 846, 1057, 1194, 1221
BmeT110I	CYCGRG	1 cut(s)	724
BmiI	GGNNCC	2 cut(s)	730, 862
BmrFI	CCNGG	6 cut(s)	426, 462, 846, 1057, 1194, 1221
BmrI	ACTGGG	1 cut(s)	501
BmsI	GCATC	1 cut(s)	421
BmtI	GCTAGC	1 cut(s)	1320
BmuI	ACTGGG	1 cut(s)	501
BoxI	GACNNNNGTC	1 cut(s)	289
BpiI	GAAGAC	1 cut(s)	75
BpmI	CTGGAG	2 cut(s)	159, 1176
BpuEI	CTTGAG	1 cut(s)	534
BpuMI	CCSGG	2 cut(s)	846, 1057
BsaJI	CCNNGG	2 cut(s)	280, 835
Bsc4I	CCNNNNNNNGG	2 cut(s)	29, 361
Bse1I	ACTGG	1 cut(s)	496
Bse3DI	GCAATG	1 cut(s)	312
BseBI	CCWGG	4 cut(s)	426, 462, 1194, 1221
BseDI	CCNNGG	2 cut(s)	280, 835
BseGI	GGATG	5 cut(s)	696, 740, 912, 1104, 1126
BseLI	CCNNNNNNNGG	2 cut(s)	29, 361
BseMI	GCAATG	1 cut(s)	312
BseMII	CTCAG	2 cut(s)	810, 1004
BseNI	ACTGG	1 cut(s)	496
BseRI	GAGGAG	2 cut(s)	348, 537
BseXI	GCAGC	2 cut(s)	31, 550
BseYI	CCCAGC	2 cut(s)	780, 1082
BshFI	GGCC	1 cut(s)	840
BshNI	GGYRCC	1 cut(s)	860
BsiHKAI	GWGCWC	1 cut(s)	402
BsiHKCI	CYCGRG	1 cut(s)	724
BsiSI	CCGG	2 cut(s)	845, 1056
BslFI	GGGAC	1 cut(s)	168
BslI	CCNNNNNNNGG	2 cut(s)	29, 361
BsmAI	GTCTC	2 cut(s)	712, 1003
BsmFI	GGGAC	1 cut(s)	168
BsmI	GAATGC	2 cut(s)	208, 265
BsnI	GGCC	1 cut(s)	840
BsoBI	CYCGRG	1 cut(s)	724
Bsp1286I	GDGCHC	1 cut(s)	402
Bsp143I	GATC	6 cut(s)	181, 230, 421, 728, 1027, 1032
Bsp19I	CCATGG	1 cut(s)	280
BspACI	CCGC	2 cut(s)	390, 732
BspANI	GGCC	1 cut(s)	840
BspCNI	CTCAG	2 cut(s)	809, 1005
BspLI	GGNNCC	2 cut(s)	730, 862
BspMI	ACCTGC	1 cut(s)	368
BspOI	GCTAGC	1 cut(s)	1320
BspPI	GGATC	4 cut(s)	238, 416, 723, 736
BspQI	GCTCTTC	2 cut(s)	198, 334
BspT107I	GGYRCC	1 cut(s)	860
BsrDI	GCAATG	1 cut(s)	312
BsrI	ACTGG	1 cut(s)	496
BssECI	CCNNGG	2 cut(s)	280, 835
BssMI	GATC	6 cut(s)	181, 230, 421, 728, 1027, 1032
BssT1I	CCWWGG	2 cut(s)	280, 835
Bst2UI	CCWGG	4 cut(s)	426, 462, 1194, 1221
Bst4CI	ACNGT	1 cut(s)	865
Bst6I	CTCTTC	2 cut(s)	198, 334
BstC8I	GCNNGC	2 cut(s)	88, 1318
BstDEI	CTNAG	3 cut(s)	796, 949, 1013
BstDSI	CCRYGG	1 cut(s)	280
BstF5I	GGATG	5 cut(s)	696, 740, 912, 1104, 1126
BstKTI	GATC	6 cut(s)	184, 233, 424, 731, 1030, 1035
BstMAI	GTCTC	2 cut(s)	712, 1003
BstMBI	GATC	6 cut(s)	181, 230, 421, 728, 1027, 1032
BstMWI	GCNNNNNNNGC	3 cut(s)	389, 560, 846
BstNI	CCWGG	4 cut(s)	426, 462, 1194, 1221
BstPAI	GACNNNNGTC	1 cut(s)	289
BstSCI	CCNGG	6 cut(s)	424, 460, 844, 1055, 1192, 1219
BstSFI	CTRYAG	1 cut(s)	6
BstV1I	GCAGC	2 cut(s)	31, 550
BstV2I	GAAGAC	1 cut(s)	75
BstX2I	RGATCY	1 cut(s)	728
BstYI	RGATCY	1 cut(s)	728
BsuRI	GGCC	1 cut(s)	840
BtgI	CCRYGG	1 cut(s)	280
BtsCI	GGATG	5 cut(s)	696, 740, 912, 1104, 1126
BtsIMutI	CAGTG	2 cut(s)	516, 978
BveI	ACCTGC	1 cut(s)	368
Cac8I	GCNNGC	2 cut(s)	88, 1318
CsiI	ACCWGGT	1 cut(s)	1219
Csp6I	GTAC	4 cut(s)	196, 608, 787, 868
CviAII	CATG	8 cut(s)	62, 281, 319, 592, 958, 1169, 1249, 1297
CviQI	GTAC	4 cut(s)	196, 608, 787, 868
DdeI	CTNAG	3 cut(s)	796, 949, 1013
DpnI	GATC	6 cut(s)	183, 232, 423, 730, 1029, 1034
DpnII	GATC	6 cut(s)	181, 230, 421, 728, 1027, 1032
Eam1104I	CTCTTC	2 cut(s)	198, 334
EarI	CTCTTC	2 cut(s)	198, 334
EciI	GGCGGA	1 cut(s)	721
Ecl136II	GAGCTC	1 cut(s)	400
Eco130I	CCWWGG	2 cut(s)	280, 835
Eco24I	GRGCYC	1 cut(s)	402
Eco53kI	GAGCTC	1 cut(s)	400
Eco88I	CYCGRG	1 cut(s)	724
EcoICRI	GAGCTC	1 cut(s)	400
EcoRI	GAATTC	3 cut(s)	749, 974, 1156
EcoRII	CCWGG	4 cut(s)	424, 460, 1192, 1219
EcoT14I	CCWWGG	2 cut(s)	280, 835
EcoT22I	ATGCAT	1 cut(s)	1170
EcoT38I	GRGCYC	1 cut(s)	402
ErhI	CCWWGG	2 cut(s)	280, 835
FaeI	CATG	8 cut(s)	65, 284, 322, 595, 961, 1172, 1252, 1300
FaqI	GGGAC	1 cut(s)	168
FatI	CATG	8 cut(s)	61, 280, 318, 591, 957, 1168, 1248, 1296
FauNDI	CATATG	1 cut(s)	100
FbaI	TGATCA	1 cut(s)	1032
Fnu4HI	GCNGC	3 cut(s)	20, 390, 564
FokI	GGATG	5 cut(s)	683, 727, 919, 1111, 1133
FriOI	GRGCYC	1 cut(s)	402
Fsp4HI	GCNGC	3 cut(s)	20, 390, 564
FspBI	CTAG	2 cut(s)	1317, 1321
GluI	GCNGC	3 cut(s)	20, 390, 564
GsaI	CCCAGC	2 cut(s)	784, 1086
GsuI	CTGGAG	2 cut(s)	159, 1176
HaeIII	GGCC	1 cut(s)	840
HapII	CCGG	2 cut(s)	845, 1056
Hin1II	CATG	8 cut(s)	65, 284, 322, 595, 961, 1172, 1252, 1300
HindIII	AAGCTT	2 cut(s)	552, 913
HinfI	GANTC	8 cut(s)	71, 122, 166, 215, 670, 769, 776, 1147
HpaII	CCGG	2 cut(s)	845, 1056
HphI	GGTGA	6 cut(s)	66, 440, 508, 676, 910, 1151
Hpy166II	GTNNAC	3 cut(s)	499, 808, 868
Hpy188I	TCNGA	9 cut(s)	55, 214, 299, 712, 748, 799, 967, 1032, 1216
Hpy188III	TCNNGA	5 cut(s)	138, 272, 674, 726, 773
Hpy8I	GTNNAC	3 cut(s)	499, 808, 868
HpyAV	CCTTC	7 cut(s)	33, 633, 745, 851, 897, 1034, 1130
HpyCH4III	ACNGT	1 cut(s)	865
HpyCH4V	TGCA	8 cut(s)	86, 161, 383, 566, 641, 764, 1168, 1274
HpyF10VI	GCNNNNNNNGC	3 cut(s)	389, 560, 846
HpyF3I	CTNAG	3 cut(s)	796, 949, 1013
Hsp92II	CATG	8 cut(s)	65, 284, 322, 595, 961, 1172, 1252, 1300
Ksp22I	TGATCA	1 cut(s)	1032
Kzo9I	GATC	6 cut(s)	181, 230, 421, 728, 1027, 1032
LguI	GCTCTTC	2 cut(s)	198, 334
Lsp1109I	GCAGC	2 cut(s)	31, 550
LweI	GCATC	1 cut(s)	421
MabI	ACCWGGT	1 cut(s)	1219
MaeI	CTAG	2 cut(s)	1317, 1321
MaeIII	GTNAC	3 cut(s)	541, 682, 889
MalI	GATC	6 cut(s)	183, 232, 423, 730, 1029, 1034
MboI	GATC	6 cut(s)	181, 230, 421, 728, 1027, 1032
MboII	GAAGA	5 cut(s)	80, 210, 215, 351, 921
MflI	RGATCY	1 cut(s)	728
MhlI	GDGCHC	1 cut(s)	402
MluCI	AATT	7 cut(s)	327, 347, 749, 974, 1102, 1156, 1291
MlyI	GAGTC	2 cut(s)	65, 1141
MmeI	TCCRAC	2 cut(s)	168, 470
MnlI	CCTC	7 cut(s)	326, 329, 480, 558, 596, 754, 1008
Mph1103I	ATGCAT	1 cut(s)	1170
MroXI	GAANNNNTTC	2 cut(s)	669, 804
MseI	TTAA	6 cut(s)	371, 404, 479, 923, 1046, 1106
MslI	CAYNNNNRTG	1 cut(s)	596
MspI	CCGG	2 cut(s)	845, 1056
MspR9I	CCNGG	6 cut(s)	426, 462, 846, 1057, 1194, 1221
Mva1269I	GAATGC	2 cut(s)	208, 265
MvaI	CCWGG	4 cut(s)	426, 462, 1194, 1221
MwoI	GCNNNNNNNGC	3 cut(s)	389, 560, 846
NciI	CCSGG	2 cut(s)	846, 1057
NcoI	CCATGG	1 cut(s)	280
NdeI	CATATG	1 cut(s)	100
NdeII	GATC	6 cut(s)	181, 230, 421, 728, 1027, 1032
NheI	GCTAGC	1 cut(s)	1316
NlaIII	CATG	8 cut(s)	65, 284, 322, 595, 961, 1172, 1252, 1300
NlaIV	GGNNCC	2 cut(s)	730, 862
NmuCI	GTSAC	1 cut(s)	682
NsiI	ATGCAT	1 cut(s)	1170
PaqCI	CACCTGC	1 cut(s)	368
PciSI	GCTCTTC	2 cut(s)	198, 334
PctI	GAATGC	2 cut(s)	208, 265
PdmI	GAANNNNTTC	2 cut(s)	669, 804
PfeI	GAWTC	6 cut(s)	122, 166, 215, 670, 769, 776
PfoI	TCCNGGA	1 cut(s)	460
PkrI	GCNGC	3 cut(s)	21, 391, 565
PleI	GAGTC	2 cut(s)	65, 1141
PpsI	GAGTC	2 cut(s)	65, 1141
PshAI	GACNNNNGTC	1 cut(s)	289
Psp124BI	GAGCTC	1 cut(s)	402
Psp6I	CCWGG	4 cut(s)	424, 460, 1192, 1219
PspFI	CCCAGC	2 cut(s)	780, 1082
PspGI	CCWGG	4 cut(s)	424, 460, 1192, 1219
PspN4I	GGNNCC	2 cut(s)	730, 862
PsuI	RGATCY	1 cut(s)	728
RsaI	GTAC	4 cut(s)	197, 609, 788, 869
RsaNI	GTAC	4 cut(s)	196, 608, 787, 868
RseI	CAYNNNNRTG	1 cut(s)	596
SacI	GAGCTC	1 cut(s)	402
SapI	GCTCTTC	2 cut(s)	198, 334
SaqAI	TTAA	6 cut(s)	371, 404, 479, 923, 1046, 1106
SatI	GCNGC	3 cut(s)	20, 390, 564
Sau3AI	GATC	6 cut(s)	181, 230, 421, 728, 1027, 1032
ScaI	AGTACT	1 cut(s)	197
SchI	GAGTC	2 cut(s)	65, 1141
ScrFI	CCNGG	6 cut(s)	426, 462, 846, 1057, 1194, 1221
SduI	GDGCHC	1 cut(s)	402
SexAI	ACCWGGT	1 cut(s)	1219
SfaNI	GCATC	1 cut(s)	421
SfcI	CTRYAG	1 cut(s)	6
SmiMI	CAYNNNNRTG	1 cut(s)	596
SmlI	CTYRAG	1 cut(s)	549
SmoI	CTYRAG	1 cut(s)	549
Sse9I	AATT	7 cut(s)	327, 347, 749, 974, 1102, 1156, 1291
SsiI	CCGC	2 cut(s)	390, 732
SspMI	CTAG	2 cut(s)	1317, 1321
SstI	GAGCTC	1 cut(s)	402
StyD4I	CCNGG	6 cut(s)	424, 460, 844, 1055, 1192, 1219
StyI	CCWWGG	2 cut(s)	280, 835
TaaI	ACNGT	1 cut(s)	865
TasI	AATT	7 cut(s)	327, 347, 749, 974, 1102, 1156, 1291
TatI	WGTACW	3 cut(s)	195, 786, 867
TauI	GCSGC	1 cut(s)	392
TfiI	GAWTC	6 cut(s)	122, 166, 215, 670, 769, 776
Tru1I	TTAA	6 cut(s)	371, 404, 479, 923, 1046, 1106
Tru9I	TTAA	6 cut(s)	371, 404, 479, 923, 1046, 1106
TscAI	CASTG	2 cut(s)	523, 985
TseFI	GTSAC	1 cut(s)	682
TseI	GCWGC	2 cut(s)	19, 563
Tsp45I	GTSAC	1 cut(s)	682
TspRI	CASTG	2 cut(s)	523, 985
XapI	RAATTY	5 cut(s)	347, 749, 974, 1102, 1156
XmnI	GAANNNNTTC	2 cut(s)	669, 804
XspI	CTAG	2 cut(s)	1317, 1321
ZrmI	AGTACT	1 cut(s)	197
Zsp2I	ATGCAT	1 cut(s)	1170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.