Rh2AG075800

1-aminocyclopropane-1-carboxylate synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
6348926 .. 6358006
9081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG075800.1

Sequence Viewer

Length: 1452 bp
ATGGCTGTAGAGATTGCGCAAAGTCCTTCTTCTGTTGGGCTATCAAAAATAGCTGTTTCAGCTACTCATGGAGAAGACTCACCATACTTTGCAGGCTGGAAAGCATACGATGAAAACCCTTATGATGAATCGAGTAACCCTTCGGGAGTTATACAGATGGGACTGGCAGAGAATCAAGTTTCTTTTGATTTGGTGGAAGAGTACTTGGAAAAGCATTCAGAAGCTTCCAACTGGGGATCATCATCACGCTTTAGGGAAAATGCGTTGTTTCAAGACTACCATGGCCTTTTGTCCTTTAGAAAGGCAATGGCAAGTTTCATGGAGCAAATCAGAGGAGGAAGAGCCAAATTTGACCCTCAGAGGATAGTCCTAACCGCAGGAGCTACTGCAGCCAATGAGCTTTTAACTTTCATTCTAGCTGATCCTGGAGACGCCTTGCTTGTCCCAACCCCATATTATCCGGGATTTGACAGAGACTTGAGGTGGAGGACCGGTGTGAATATTGTACCAATCCACTGCGACAGCTCAAACAATTTCCAGATTACTCCTCAAGCTTTAGAAGCAGCATATAGTGAAGCAGAAGTCAAGAACATGAAAGTGAGAGGGGTTTTAATTACAAATCCATCCAACCCATTAGGTGCAACAATCCAAAGGGTAGTCCTTCAGCAGATTCTTGATTTTGTCACCAAAAAGAACATCCATCTTGTTTCTGATGAAATCTACTCGGGATCAGCCTTCTCATCATCGAAATTCATAAGCATTGCTGAAATTCTTGAAGACAGGAAGTACAAAGATTCAGAAAGAGTTCACATTGTTTATAGTCTTTCCAAAGACCTTGGCCTCCCTGGTTTTAGAGTTGGCACCATATACTCATACAATGACAAGGTTGTAACAACAGCAAGAAGGATGTCTAGCTTCACTTTAATATCTTCTCAAACACAGCATCTCTTGGCTTCCATGCTATCCAACAAGGAATTCACTGAAAAATATATAAAGACAAATAGAGAGAGGCTGAGGAAGAGATACGATATGATCATTGATGGCCTGAAGAGCACCGGAATCGAGTGTTTGAAGGGTAATGCCGGGTTGTTTTGCTGGATGAATTTGAGTCCATTCTTGGACACACCAACAAAAGAAGGTGAATTGGCTCTTTGGAATTCCATGGTGCATGAAGTGAAGCTGAATATATCTCCCGGCTCTTCTTGCCATTGCTCTGAACCAGGATGGTTCCGGGTATGTTTTGCTAACATGAGTGAGCAAACTCTTGAAGTAGCAATGAAAAGAATACATGATTTCGTGGAACAAAGAGAGAGAAGTAGGAATCCAGTCTGCAATGTTAGCTACAATGGTTCCTACGACAAGGGTATCCAGGTCTGGCCTGAAGACCAAACTGCGGCCAGAGACATCATCATGAAGTACACAGAAGCTGTAAATAAGAAAAAGATCTTGTAG

Protein Analysis

483

Amino Acids

54.28

Weight (kDa)

6.4

Isoelectric Point (pI)

49.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 51 - 429 2.7e-99 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 18
AccB1I GGYRCC 1 cut(s) 860
AciI CCGC 2 cut(s) 375, 1394
AclWI GGATC 3 cut(s) 244, 416, 736
AcoI YGGCCR 1 cut(s) 1395
AcsI RAATTY 6 cut(s) 347, 749, 768, 974, 1102, 1156
AcuI CTGAAG 3 cut(s) 647, 1067, 1401
AcyI GRCGYC 1 cut(s) 432
AfaI GTAC 4 cut(s) 203, 507, 788, 1418
AfiI CCNNNNNNNGG 1 cut(s) 1393
AgeI ACCGGT 1 cut(s) 491
AgsI TTSAA 4 cut(s) 272, 776, 1072, 1268
AjnI CCWGG 4 cut(s) 424, 844, 1219, 1368
AjuI GAANNNNNNNTTGG 2 cut(s) 959, 991
Alw21I GWGCWC 1 cut(s) 1055
Alw26I GTCTC 3 cut(s) 423, 468, 1395
AlwI GGATC 3 cut(s) 244, 416, 736
AlwNI CAGNNNCTG 1 cut(s) 1427
Ama87I CYCGRG 1 cut(s) 724
AoxI GGCC 5 cut(s) 283, 838, 1042, 1376, 1395
ApeKI GCWGC 2 cut(s) 389, 563
ApoI RAATTY 6 cut(s) 347, 749, 768, 974, 1102, 1156
AsiGI ACCGGT 1 cut(s) 491
Asp700I GAANNNNTTC 1 cut(s) 804
AspLEI GCGC 1 cut(s) 19
AspS9I GGNCC 1 cut(s) 489
AsuC2I CCSGG 4 cut(s) 462, 1084, 1194, 1232
AsuHPI GGTGA 3 cut(s) 72, 676, 1151
AvaI CYCGRG 1 cut(s) 724
AvaII GGWCC 1 cut(s) 489
BaeI ACNNNNGTAYC 2 cut(s) 1348, 1381
BanI GGYRCC 1 cut(s) 860
BbsI GAAGAC 3 cut(s) 81, 783, 1389
Bbv12I GWGCWC 1 cut(s) 1055
BbvCI CCTCAGC 1 cut(s) 1013
BbvI GCAGC 2 cut(s) 401, 575
BccI CCATC 5 cut(s) 151, 631, 708, 1034, 1218
BcgI CGANNNNNNTGC 2 cut(s) 1042, 1076
BciT130I CCWGG 4 cut(s) 426, 846, 1221, 1370
BciVI GTATCC 1 cut(s) 1376
BclI TGATCA 1 cut(s) 1032
BcnI CCSGG 4 cut(s) 462, 1084, 1194, 1232
BcoDI GTCTC 3 cut(s) 423, 468, 1395
BfaI CTAG 2 cut(s) 416, 912
BfmI CTRYAG 2 cut(s) 6, 387
BfuI GTATCC 1 cut(s) 1376
BglII AGATCT 1 cut(s) 1443
BisI GCNGC 3 cut(s) 390, 564, 1395
BlsI GCNGC 3 cut(s) 391, 565, 1396
BmcAI AGTACT 1 cut(s) 203
Bme1390I CCNGG 8 cut(s) 426, 462, 846, 1084, 1194, 1221, 1232, 1370
Bme18I GGWCC 1 cut(s) 489
BmeT110I CYCGRG 1 cut(s) 724
BmgT120I GGNCC 1 cut(s) 489
BmiI GGNNCC 3 cut(s) 862, 1229, 1351
BmrFI CCNGG 8 cut(s) 426, 462, 846, 1084, 1194, 1221, 1232, 1370
BmrI ACTGGG 1 cut(s) 241
BmsI GCATC 1 cut(s) 952
BmuI ACTGGG 1 cut(s) 241
BpiI GAAGAC 3 cut(s) 81, 783, 1389
BpmI CTGGAG 1 cut(s) 447
Bpu10I CCTNAGC 1 cut(s) 1013
BpuEI CTTGAG 2 cut(s) 499, 534
BpuMI CCSGG 4 cut(s) 462, 1084, 1194, 1232
BsaBI GATNNNNATC 1 cut(s) 241
BsaHI GRCGYC 1 cut(s) 432
BsaJI CCNNGG 4 cut(s) 280, 835, 844, 1161
BsaWI WCCGGW 2 cut(s) 491, 1055
BsaXI ACNNNNNCTCC 2 cut(s) 478, 508
Bsc4I CCNNNNNNNGG 1 cut(s) 1393
Bse118I RCCGGY 1 cut(s) 491
Bse1I ACTGG 3 cut(s) 168, 236, 1325
Bse3DI GCAATG 5 cut(s) 312, 759, 1207, 1281, 1339
Bse8I GATNNNNATC 1 cut(s) 241
BseBI CCWGG 4 cut(s) 426, 846, 1221, 1370
BseDI CCNNGG 4 cut(s) 280, 835, 844, 1161
BseGI GGATG 5 cut(s) 623, 696, 912, 1104, 1229
BseJI GATNNNNATC 1 cut(s) 241
BseLI CCNNNNNNNGG 1 cut(s) 1393
BseMI GCAATG 5 cut(s) 312, 759, 1207, 1281, 1339
BseMII CTCAG 2 cut(s) 371, 1004
BseNI ACTGG 3 cut(s) 168, 236, 1325
BseRI GAGGAG 2 cut(s) 348, 537
BseXI GCAGC 2 cut(s) 401, 575
BshFI GGCC 5 cut(s) 285, 840, 1044, 1378, 1397
BshNI GGYRCC 1 cut(s) 860
BshTI ACCGGT 1 cut(s) 491
BsiHKAI GWGCWC 1 cut(s) 1055
BsiHKCI CYCGRG 1 cut(s) 724
BsiSI CCGG 6 cut(s) 461, 492, 1056, 1083, 1194, 1231
BslFI GGGAC 2 cut(s) 174, 428
BslI CCNNNNNNNGG 1 cut(s) 1393
BsmAI GTCTC 3 cut(s) 423, 468, 1395
BsmBI CGTCTC 1 cut(s) 423
BsmFI GGGAC 2 cut(s) 174, 428
BsmI GAATGC 1 cut(s) 214
BsnI GGCC 5 cut(s) 285, 840, 1044, 1378, 1397
BsoBI CYCGRG 1 cut(s) 724
Bsp1286I GDGCHC 1 cut(s) 1055
Bsp143I GATC 5 cut(s) 236, 421, 728, 1032, 1443
Bsp19I CCATGG 2 cut(s) 280, 1161
BspACI CCGC 2 cut(s) 375, 1394
BspANI GGCC 5 cut(s) 285, 840, 1044, 1378, 1397
BspCNI CTCAG 2 cut(s) 370, 1005
BspHI TCATGA 1 cut(s) 1410
BspLI GGNNCC 3 cut(s) 862, 1229, 1351
BspMAI CTGCAG 1 cut(s) 391
BspPI GGATC 3 cut(s) 244, 416, 736
BspQI GCTCTTC 3 cut(s) 334, 1043, 1204
BspT107I GGYRCC 1 cut(s) 860
BsrDI GCAATG 5 cut(s) 312, 759, 1207, 1281, 1339
BsrFI RCCGGY 1 cut(s) 491
BsrI ACTGG 3 cut(s) 168, 236, 1325
BssAI RCCGGY 1 cut(s) 491
BssECI CCNNGG 4 cut(s) 280, 835, 844, 1161
BssMI GATC 5 cut(s) 236, 421, 728, 1032, 1443
BssNI GRCGYC 1 cut(s) 432
BssT1I CCWWGG 3 cut(s) 280, 835, 1161
Bst2UI CCWGG 4 cut(s) 426, 846, 1221, 1370
Bst6I CTCTTC 5 cut(s) 192, 334, 1013, 1043, 1204
BstACI GRCGYC 1 cut(s) 432
BstC8I GCNNGC 1 cut(s) 94
BstDEI CTNAG 2 cut(s) 357, 1013
BstDSI CCRYGG 2 cut(s) 280, 1161
BstF5I GGATG 5 cut(s) 623, 696, 912, 1104, 1229
BstHHI GCGC 1 cut(s) 19
BstKTI GATC 5 cut(s) 239, 424, 731, 1035, 1446
BstMAI GTCTC 3 cut(s) 423, 468, 1395
BstMBI GATC 5 cut(s) 236, 421, 728, 1032, 1443
BstMWI GCNNNNNNNGC 6 cut(s) 59, 389, 560, 1050, 1203, 1338
BstNI CCWGG 4 cut(s) 426, 846, 1221, 1370
BstSCI CCNGG 8 cut(s) 424, 460, 844, 1082, 1192, 1219, 1230, 1368
BstSFI CTRYAG 2 cut(s) 6, 387
BstV1I GCAGC 2 cut(s) 401, 575
BstV2I GAAGAC 3 cut(s) 81, 783, 1389
BstX2I RGATCY 1 cut(s) 1443
BstYI RGATCY 1 cut(s) 1443
BsuI GTATCC 1 cut(s) 1376
BsuRI GGCC 5 cut(s) 285, 840, 1044, 1378, 1397
BtgI CCRYGG 2 cut(s) 280, 1161
BtsCI GGATG 5 cut(s) 623, 696, 912, 1104, 1229
BtsI GCAGTG 1 cut(s) 514
BtsIMutI CAGTG 2 cut(s) 514, 978
Cac8I GCNNGC 1 cut(s) 94
CaiI CAGNNNCTG 1 cut(s) 1427
CciI TCATGA 1 cut(s) 1410
CfoI GCGC 1 cut(s) 19
Cfr10I RCCGGY 1 cut(s) 491
Cfr13I GGNCC 1 cut(s) 489
CseI GACGC 1 cut(s) 440
Csp6I GTAC 4 cut(s) 202, 506, 787, 1417
CspAI ACCGGT 1 cut(s) 491
CviQI GTAC 4 cut(s) 202, 506, 787, 1417
DdeI CTNAG 2 cut(s) 357, 1013
DpnI GATC 5 cut(s) 238, 423, 730, 1034, 1445
DpnII GATC 5 cut(s) 236, 421, 728, 1032, 1443
EaeI YGGCCR 1 cut(s) 1395
Eam1104I CTCTTC 5 cut(s) 192, 334, 1013, 1043, 1204
EarI CTCTTC 5 cut(s) 192, 334, 1013, 1043, 1204
Eco130I CCWWGG 3 cut(s) 280, 835, 1161
Eco47I GGWCC 1 cut(s) 489
Eco57I CTGAAG 3 cut(s) 647, 1067, 1401
Eco88I CYCGRG 1 cut(s) 724
EcoRI GAATTC 2 cut(s) 974, 1156
EcoRII CCWGG 4 cut(s) 424, 844, 1219, 1368
EcoT14I CCWWGG 3 cut(s) 280, 835, 1161
ErhI CCWWGG 3 cut(s) 280, 835, 1161
Esp3I CGTCTC 1 cut(s) 423
FalI AAGNNNNNCTT 2 cut(s) 13, 45
FaqI GGGAC 2 cut(s) 174, 428
FbaI TGATCA 1 cut(s) 1032
Fnu4HI GCNGC 3 cut(s) 390, 564, 1395
FokI GGATG 5 cut(s) 610, 683, 919, 1111, 1236
Fsp4HI GCNGC 3 cut(s) 390, 564, 1395
FspBI CTAG 2 cut(s) 416, 912
FspI TGCGCA 1 cut(s) 18
GlaI GCGC 1 cut(s) 18
GluI GCNGC 3 cut(s) 390, 564, 1395
GsuI CTGGAG 1 cut(s) 447
HaeIII GGCC 5 cut(s) 285, 840, 1044, 1378, 1397
HapII CCGG 6 cut(s) 461, 492, 1056, 1083, 1194, 1231
HgaI GACGC 1 cut(s) 440
HhaI GCGC 1 cut(s) 19
Hin1I GRCGYC 1 cut(s) 432
Hin6I GCGC 1 cut(s) 17
HinP1I GCGC 1 cut(s) 17
HindIII AAGCTT 2 cut(s) 222, 552
HinfI GANTC 8 cut(s) 77, 128, 172, 670, 794, 1059, 1108, 1321
HpaII CCGG 6 cut(s) 461, 492, 1056, 1083, 1194, 1231
HphI GGTGA 3 cut(s) 72, 676, 1151
Hpy166II GTNNAC 2 cut(s) 808, 1419
Hpy188I TCNGA 6 cut(s) 220, 332, 360, 712, 799, 1216
Hpy188III TCNNGA 9 cut(s) 144, 272, 538, 586, 674, 726, 773, 1265, 1411
Hpy8I GTNNAC 2 cut(s) 808, 1419
HpyAV CCTTC 7 cut(s) 36, 150, 671, 745, 897, 1066, 1130
HpyCH4V TGCA 5 cut(s) 92, 389, 641, 1168, 1332
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 389, 560, 1050, 1203, 1338
HpyF3I CTNAG 2 cut(s) 357, 1013
Hsp92I GRCGYC 1 cut(s) 432
HspAI GCGC 1 cut(s) 17
Ksp22I TGATCA 1 cut(s) 1032
Kzo9I GATC 5 cut(s) 236, 421, 728, 1032, 1443
LguI GCTCTTC 3 cut(s) 334, 1043, 1204
LmnI GCTCC 2 cut(s) 322, 380
Lsp1109I GCAGC 2 cut(s) 401, 575
LweI GCATC 1 cut(s) 952
MaeI CTAG 2 cut(s) 416, 912
MaeIII GTNAC 3 cut(s) 134, 682, 889
MalI GATC 5 cut(s) 238, 423, 730, 1034, 1445
MboI GATC 5 cut(s) 236, 421, 728, 1032, 1443
MflI RGATCY 1 cut(s) 1443
MhlI GDGCHC 1 cut(s) 1055
MluCI AATT 9 cut(s) 347, 532, 612, 749, 768, 974, 1102, 1142, 1156
MlyI GAGTC 2 cut(s) 71, 1117
MmeI TCCRAC 3 cut(s) 252, 651, 990
MroXI GAANNNNTTC 1 cut(s) 804
MseI TTAA 3 cut(s) 404, 611, 923
MslI CAYNNNNRTG 2 cut(s) 596, 1409
MspI CCGG 6 cut(s) 461, 492, 1056, 1083, 1194, 1231
MspR9I CCNGG 8 cut(s) 426, 462, 846, 1084, 1194, 1221, 1232, 1370
Mva1269I GAATGC 1 cut(s) 214
MvaI CCWGG 4 cut(s) 426, 846, 1221, 1370
MwoI GCNNNNNNNGC 6 cut(s) 59, 389, 560, 1050, 1203, 1338
NciI CCSGG 4 cut(s) 462, 1084, 1194, 1232
NcoI CCATGG 2 cut(s) 280, 1161
NdeII GATC 5 cut(s) 236, 421, 728, 1032, 1443
NlaIV GGNNCC 3 cut(s) 862, 1229, 1351
NmuCI GTSAC 1 cut(s) 682
NsbI TGCGCA 1 cut(s) 18
PagI TCATGA 1 cut(s) 1410
PciSI GCTCTTC 3 cut(s) 334, 1043, 1204
PctI GAATGC 1 cut(s) 214
PdmI GAANNNNTTC 1 cut(s) 804
PfeI GAWTC 6 cut(s) 128, 172, 670, 794, 1059, 1321
PfoI TCCNGGA 2 cut(s) 424, 460
PinAI ACCGGT 1 cut(s) 491
PkrI GCNGC 3 cut(s) 391, 565, 1396
PleI GAGTC 2 cut(s) 71, 1116
PpsI GAGTC 2 cut(s) 71, 1116
Psp6I CCWGG 4 cut(s) 424, 844, 1219, 1368
PspGI CCWGG 4 cut(s) 424, 844, 1219, 1368
PspN4I GGNNCC 3 cut(s) 862, 1229, 1351
PspPI GGNCC 1 cut(s) 489
PstI CTGCAG 1 cut(s) 391
PstNI CAGNNNCTG 1 cut(s) 1427
PsuI RGATCY 1 cut(s) 1443
RsaI GTAC 4 cut(s) 203, 507, 788, 1418
RsaNI GTAC 4 cut(s) 202, 506, 787, 1417
RseI CAYNNNNRTG 2 cut(s) 596, 1409
SapI GCTCTTC 3 cut(s) 334, 1043, 1204
SaqAI TTAA 3 cut(s) 404, 611, 923
SatI GCNGC 3 cut(s) 390, 564, 1395
Sau3AI GATC 5 cut(s) 236, 421, 728, 1032, 1443
Sau96I GGNCC 1 cut(s) 489
ScaI AGTACT 1 cut(s) 203
SchI GAGTC 2 cut(s) 71, 1117
ScrFI CCNGG 8 cut(s) 426, 462, 846, 1084, 1194, 1221, 1232, 1370
SduI GDGCHC 1 cut(s) 1055
SfaNI GCATC 1 cut(s) 952
SfcI CTRYAG 2 cut(s) 6, 387
SinI GGWCC 1 cut(s) 489
SmiMI CAYNNNNRTG 2 cut(s) 596, 1409
SmlI CTYRAG 2 cut(s) 478, 549
SmoI CTYRAG 2 cut(s) 478, 549
Sse9I AATT 9 cut(s) 347, 532, 612, 749, 768, 974, 1102, 1142, 1156
SsiI CCGC 2 cut(s) 375, 1394
SspI AATATT 1 cut(s) 502
SspMI CTAG 2 cut(s) 416, 912
StyD4I CCNGG 8 cut(s) 424, 460, 844, 1082, 1192, 1219, 1230, 1368
StyI CCWWGG 3 cut(s) 280, 835, 1161
TaqI TCGA 3 cut(s) 131, 746, 1062
TasI AATT 9 cut(s) 347, 532, 612, 749, 768, 974, 1102, 1142, 1156
TatI WGTACW 3 cut(s) 201, 786, 1416
TauI GCSGC 1 cut(s) 1397
TfiI GAWTC 6 cut(s) 128, 172, 670, 794, 1059, 1321
Tru1I TTAA 3 cut(s) 404, 611, 923
Tru9I TTAA 3 cut(s) 404, 611, 923
TscAI CASTG 2 cut(s) 521, 985
TseFI GTSAC 1 cut(s) 682
TseI GCWGC 2 cut(s) 389, 563
Tsp45I GTSAC 1 cut(s) 682
TspRI CASTG 2 cut(s) 521, 985
VpaK11BI GGWCC 1 cut(s) 489
XapI RAATTY 6 cut(s) 347, 749, 768, 974, 1102, 1156
XmnI GAANNNNTTC 1 cut(s) 804
XspI CTAG 2 cut(s) 416, 912
ZrmI AGTACT 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.