Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005381

Physical Location & Seq

Genomic Coordinates Reverse (-)

2422821 .. 2426880

Gene Structure 4060 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0030000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGACGACGAAACGACACCGTCCAGGGGCTTCTACGCCGCGAGAGGCGCCGGCGCCGGAGGCAAACTGAAGAAGCCGCCGTCCCGCAAGCCGCCGACGACTCCTTACTCCCGTCCGCCTCCGAACCCAGCCGAGCGAGGCAAGCGGCGGTGGCTGTCCAGCGTCGTTGATCCCGCTTATCGGCTCATCTCCGGCGGCGCCACTCGGCTTTTCACCTCCTTCTTCTCGCCGGCGAATACCGTTAATGCCCTTCCCGCGCCTAATCACGATGAACAGGAGGCGGAGATTGAACAGAATGCTACTGGTGACGAGCACAACGATGATTCAAATAATTGGGTGACCAGAACTGAAACAGCAGGTCCTAGCAGGCCAGGAAATAGTTCAAACGATAGTTCTGGTTTTCAAGGCCACACTTTAGACGACAACAGCAACCTGTCTGATGTGAGTGGGCTTTCTCAAATTGAGCAGCTACTGAAGGGGAAAAAGTTTTCTAGGGATGAAGTCAATCGCCTGATGGATATTATTCAATCAAAGGCTGTTGAGCATCCTATTGTGGGGCACGAAAAGGAAAAAAAAGGCATTACTACTGGAGGAGAAGCCAAGGGGCCTGTAAATGCCCATGCTGTGCCAAAGGCGTCATCTGGAGAAATTCAGGAAGACATGAGTAAAACTATTTGGGGAACGTCAACCTCTCTTTCCCAGTCAGCTAGGCGAGAGGAGGTTGGCGCTTCACCTATTGAAATTGCAAAAGCATATATGGGAAGCAGAACATCGGATATTGATGATAGGGCAGCAATGCATAGTAATGATATTGCATCAACACCATTCATTCCAGCACCTTCCCCTAAGCCATCAACATGTTGGCCTGGTTCCATGGTACAAAACCAACGCGATTATTCAACCCCACAGAGTGAAAGAGGCAGATTTGGCCTTCATAATTTTCCCAGAACCCCTTATTCTAGAACTATATTTTCAAAATCCAAGTCCAAGTTTACTCCATTACAAGGTGGTGATGATAAGTCCCAAAGAACATCATCAACTCCTTTTAAGCACTTGCAAACTCCTGTATATGGGCAGACATTTGGGAAGCCAAGAGATGATGCATTGGATGGTGGCTATGGATCATCAGTAGGACCAATTCGCAGGACACGCCATAAAGTTGCTACACAAACTCCTCCTAGAGGATCTCCTTATGTTCATTCTTCTTCAATTGGAACTCCACAGGTGGAAAATTCCCACATCCTCAAAGAATTTTTGCCTGCTGGCAGGAAGAATTTTGAACTTGGAGGATTAAGTGGCAACTCCCCGTTCCAGTCAATAGATAGAAAGCCTTCCAGCTCTCAAGTCGGTGTTCATCCACAGTCTAGTCAGATTGCAAGGACAATTTTGGAGCACATCAATAGAAATTCACCCACTCCTAAAGATAAGTCAGAAGAGTTGAAGCTAGCCATTGCGTGGAAGAAACCCCTGACTTCTGATATTCCTTCACTCAACCAGAATGGAGATGATAACTCACTTCTAGGAGGGTCTAGTTCCCGTAAAGTCATAATTAATGATAACCAGAAAAAGCCTGCTCTTGAGAACGCTGAAAAGTGGAACTCTCTGTTTAAGGTCCCACCTCCAAAGCCTAGTGTAAAAGCTGCTGATGTTGTAAGCAATGGTCCTGCTGGTGGTGGGAGTGGTGGAAGATCTCTAGCCAAGAACACAGAGGAGACTACTTTAAATGTTGTTGGTTCGGAGGTACTAAATCAACAGAAGAAGCCTCTCTTTCAACCTTCAGGGACTAAACGCGTTTTTCCTGCTATATCTGTTGACAAGCCCGAGTCCACATGGAAGTTTTCTTCTGATAAGAGCTCTACCTTCACATTCCCAGTGTCTACATCTTCCGCTGTGTTTTCTGAACCACCCACACCGTCCGTTATGCCATCTGTGTCGACTAGCACTGAGCATCAGCTGAAAGATGGAGATGCTGCTGTTCCTACATACAGTTTCGGATCCAAGAAGTCTGATCGCCTTGTGTTTACATTCCCTTCTACCAGTGATGCGATCCAGATTGGTAATTCAGATATTAAGTTCAGCTTTGGATCAGATAAGCCAAGATTGTCATTCAAAGATGCCGTCTGCCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0006082 GO:0006520 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009692 GO:0009693 GO:0009987 GO:0010817 GO:0016053 GO:0016829 GO:0016846 GO:0016847 GO:0018871 GO:0019752 GO:0032787 GO:0042218 GO:0042445 GO:0042446 GO:0042802 GO:0043436 GO:0043449 GO:0043450 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1900673 GO:1900674 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 ko01110 map00270 map01100 map01110

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

709

Amino Acids

76.48

Weight (kDa)

9.4

Isoelectric Point (pI)

50.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005381)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26200
fragaria_vesca	FvH4_1g06950 FvH4_1g06950 FvH4_1g06950 FvH4_1g06950 FvH4_1g06950
malus_domestica	MD02G1073800.v1.1 MD02G1073900.v1.1 MD15G1203500.v1.1
prunus_persica	Prupe.7G213800_v2.0.a1 Prupe.7G213900_v2.0.a1
pyrus_communis	pycom02g05820 pycom02g05830 pycom15g18050
rosa_chinensis	RchiOBHm_Chr2g0092901 RchiOBHm_Chr2g0092911
rosa_laevigata	RLG00000016344 RLG00000016346
rosa_multiflora	Rmu_sc0000965.1_g000001 Rmu_sc0014880.1_g000003 Rmu_sc0022236.1_g000001
rosa_rugosa	Rorug02G0030000
rosa_samantha	Rh2AG075800 Rh2AG075900 Rh2BG077200 Rh2CG079500 Rh2DG074600
rosa_wichuraiana	Rw2G007020 Rw2G007030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	347
AccB1I	GGYRCC	3 cut(s)	47, 53, 197
AccB7I	CCANNNNNTGG	1 cut(s)	1455
AccI	GTMKAC	2 cut(s)	1877, 1934
AccII	CGCG	4 cut(s)	41, 257, 891, 1791
AclWI	GGATC	7 cut(s)	164, 1129, 1192, 1989, 2002, 2041, 2092
AcsI	RAATTY	5 cut(s)	648, 1231, 1250, 1273, 1405
AcuI	CTGAAG	3 cut(s)	89, 494, 1761
AcyI	GRCGYC	4 cut(s)	48, 54, 198, 635
AdeI	CACNNNGTG	1 cut(s)	911
AfaI	GTAC	2 cut(s)	879, 1743
AfiI	CCNNNNNNNGG	8 cut(s)	26, 180, 554, 1004, 1070, 1181, 1455, 1670
AflIII	ACRYGT	2 cut(s)	857, 1789
AjnI	CCWGG	3 cut(s)	23, 370, 865
AluBI	AGCT	8 cut(s)	469, 707, 1338, 1444, 1640, 1854, 1954, 2079
AluI	AGCT	8 cut(s)	469, 707, 1338, 1444, 1640, 1854, 1954, 2079
Alw21I	GWGCWC	3 cut(s)	315, 1395, 1856
Alw26I	GTCTC	1 cut(s)	1706
AlwI	GGATC	7 cut(s)	164, 1129, 1192, 1989, 2002, 2041, 2092
AlwNI	CAGNNNCTG	1 cut(s)	472
Ama87I	CYCGRG	1 cut(s)	1820
AoxI	GGCC	5 cut(s)	368, 406, 605, 863, 928
ApeKI	GCWGC	4 cut(s)	466, 791, 1640, 1970
ApoI	RAATTY	5 cut(s)	648, 1231, 1250, 1273, 1405
ArsI	GACNNNNNNTTYG	3 cut(s)	968, 1000, 2103
AseI	ATTAAT	1 cut(s)	1551
Asp700I	GAANNNNTTC	2 cut(s)	379, 1330
AspLEI	GCGC	5 cut(s)	50, 56, 200, 259, 728
AspS9I	GGNCC	5 cut(s)	359, 605, 1133, 1612, 1661
AsuHPI	GGTGA	6 cut(s)	205, 317, 349, 723, 1022, 1401
AsuNHI	GCTAGC	1 cut(s)	1444
AvaI	CYCGRG	1 cut(s)	1820
AvaII	GGWCC	4 cut(s)	359, 1133, 1612, 1661
BaeGI	GKGCMC	1 cut(s)	561
BamHI	GGATCC	1 cut(s)	1994
BanI	GGYRCC	3 cut(s)	47, 53, 197
BanII	GRGCYC	1 cut(s)	1856
BbsI	GAAGAC	1 cut(s)	663
Bbv12I	GWGCWC	3 cut(s)	315, 1395, 1856
BbvI	GCAGC	4 cut(s)	478, 803, 1627, 1957
BccI	CCATC	5 cut(s)	508, 859, 1103, 1933, 1955
BceAI	ACGGC	2 cut(s)	64, 2102
BciT130I	CCWGG	3 cut(s)	25, 372, 867
BcoDI	GTCTC	1 cut(s)	1706
BfoI	RGCGCY	4 cut(s)	51, 57, 201, 729
BfuAI	ACCTGC	1 cut(s)	347
BglII	AGATCT	1 cut(s)	1688
BisI	GCNGC	9 cut(s)	39, 77, 92, 146, 196, 467, 792, 1641, 1971
BlsI	GCNGC	9 cut(s)	40, 78, 93, 147, 197, 468, 793, 1642, 1972
Bme1390I	CCNGG	3 cut(s)	25, 372, 867
Bme18I	GGWCC	4 cut(s)	359, 1133, 1612, 1661
BmeT110I	CYCGRG	1 cut(s)	1820
BmgT120I	GGNCC	5 cut(s)	359, 605, 1133, 1612, 1661
BmiI	GGNNCC	7 cut(s)	49, 55, 199, 606, 871, 1614, 1996
BmrFI	CCNGG	3 cut(s)	25, 372, 867
BmrI	ACTGGG	2 cut(s)	694, 1865
BmsI	GCATC	7 cut(s)	553, 824, 1090, 1957, 1957, 2032, 2104
BmtI	GCTAGC	1 cut(s)	1448
BmuI	ACTGGG	2 cut(s)	694, 1865
BpiI	GAAGAC	1 cut(s)	663
BpmI	CTGGAG	2 cut(s)	609, 663
Bpu10I	CCTNAGC	1 cut(s)	846
BpuEI	CTTGAG	2 cut(s)	1326, 1598
BsaHI	GRCGYC	4 cut(s)	48, 54, 198, 635
BsaJI	CCNNGG	3 cut(s)	24, 600, 873
BsaXI	ACNNNNNCTCC	2 cut(s)	1156, 1186
Bsc4I	CCNNNNNNNGG	8 cut(s)	26, 180, 554, 1004, 1070, 1181, 1455, 1670
Bse118I	RCCGGY	2 cut(s)	50, 229
Bse1I	ACTGG	6 cut(s)	307, 592, 700, 1312, 1871, 2037
Bse3DI	GCAATG	3 cut(s)	801, 1449, 1663
BseBI	CCWGG	3 cut(s)	25, 372, 867
BseDI	CCNNGG	3 cut(s)	24, 600, 873
BseGI	GGATG	5 cut(s)	502, 544, 1114, 1239, 1354
BseLI	CCNNNNNNNGG	8 cut(s)	26, 180, 554, 1004, 1070, 1181, 1455, 1670
BseMI	GCAATG	3 cut(s)	801, 1449, 1663
BseMII	CTCAG	1 cut(s)	1935
BseNI	ACTGG	6 cut(s)	307, 592, 700, 1312, 1871, 2037
BseRI	GAGGAG	4 cut(s)	606, 731, 1164, 1724
BseSI	GKGCMC	1 cut(s)	561
BseXI	GCAGC	4 cut(s)	478, 803, 1627, 1957
BseYI	CCCAGC	1 cut(s)	127
Bsh1236I	CGCG	4 cut(s)	41, 257, 891, 1791
BshFI	GGCC	5 cut(s)	370, 408, 607, 865, 930
BshNI	GGYRCC	3 cut(s)	47, 53, 197
BsiHKAI	GWGCWC	3 cut(s)	315, 1395, 1856
BsiHKCI	CYCGRG	1 cut(s)	1820
BsiSI	CCGG	4 cut(s)	51, 57, 192, 230
BslFI	GGGAC	4 cut(s)	67, 1006, 1598, 1795
BslI	CCNNNNNNNGG	8 cut(s)	26, 180, 554, 1004, 1070, 1181, 1455, 1670
BsmAI	GTCTC	1 cut(s)	1706
BsmFI	GGGAC	4 cut(s)	67, 1006, 1598, 1795
BsmI	GAATGC	1 cut(s)	301
BsnI	GGCC	5 cut(s)	370, 408, 607, 865, 930
BsoBI	CYCGRG	1 cut(s)	1820
Bsp1286I	GDGCHC	4 cut(s)	315, 561, 1395, 1856
Bsp143I	GATC	8 cut(s)	169, 1121, 1184, 1688, 1994, 2008, 2046, 2084
Bsp19I	CCATGG	1 cut(s)	873
BspANI	GGCC	5 cut(s)	370, 408, 607, 865, 930
BspCNI	CTCAG	1 cut(s)	1936
BspFNI	CGCG	4 cut(s)	41, 257, 891, 1791
BspLI	GGNNCC	7 cut(s)	49, 55, 199, 606, 871, 1614, 1996
BspMI	ACCTGC	1 cut(s)	347
BspOI	GCTAGC	1 cut(s)	1448
BspPI	GGATC	7 cut(s)	164, 1129, 1192, 1989, 2002, 2041, 2092
BspT107I	GGYRCC	3 cut(s)	47, 53, 197
BsrDI	GCAATG	3 cut(s)	801, 1449, 1663
BsrFI	RCCGGY	2 cut(s)	50, 229
BsrI	ACTGG	6 cut(s)	307, 592, 700, 1312, 1871, 2037
BssAI	RCCGGY	2 cut(s)	50, 229
BssECI	CCNNGG	3 cut(s)	24, 600, 873
BssMI	GATC	8 cut(s)	169, 1121, 1184, 1688, 1994, 2008, 2046, 2084
BssNI	GRCGYC	4 cut(s)	48, 54, 198, 635
BssT1I	CCWWGG	2 cut(s)	600, 873
Bst2UI	CCWGG	3 cut(s)	25, 372, 867
Bst4CI	ACNGT	5 cut(s)	21, 241, 1362, 1914, 1988
Bst6I	CTCTTC	1 cut(s)	1428
BstACI	GRCGYC	4 cut(s)	48, 54, 198, 635
BstC8I	GCNNGC	9 cut(s)	52, 89, 143, 231, 368, 1260, 1264, 1446, 1572
BstDEI	CTNAG	2 cut(s)	846, 1944
BstDSI	CCRYGG	1 cut(s)	873
BstEII	GGTNACC	1 cut(s)	337
BstENI	CCTNNNNNAGG	1 cut(s)	1179
BstF5I	GGATG	5 cut(s)	502, 544, 1114, 1239, 1354
BstFNI	CGCG	4 cut(s)	41, 257, 891, 1791
BstH2I	RGCGCY	4 cut(s)	51, 57, 201, 729
BstHHI	GCGC	5 cut(s)	50, 56, 200, 259, 728
BstKTI	GATC	8 cut(s)	172, 1124, 1187, 1691, 1997, 2011, 2049, 2087
BstMAI	GTCTC	1 cut(s)	1706
BstMBI	GATC	8 cut(s)	169, 1121, 1184, 1688, 1994, 2008, 2046, 2084
BstMWI	GCNNNNNNNGC	7 cut(s)	47, 60, 142, 151, 254, 927, 1149
BstNI	CCWGG	3 cut(s)	25, 372, 867
BstNSI	RCATGY	1 cut(s)	861
BstPI	GGTNACC	1 cut(s)	337
BstSCI	CCNGG	3 cut(s)	23, 370, 865
BstSLI	GKGCMC	1 cut(s)	561
BstUI	CGCG	4 cut(s)	41, 257, 891, 1791
BstV1I	GCAGC	4 cut(s)	478, 803, 1627, 1957
BstV2I	GAAGAC	1 cut(s)	663
BstX2I	RGATCY	3 cut(s)	1184, 1688, 1994
BstYI	RGATCY	3 cut(s)	1184, 1688, 1994
BsuRI	GGCC	5 cut(s)	370, 408, 607, 865, 930
BtgI	CCRYGG	1 cut(s)	873
BtsCI	GGATG	5 cut(s)	502, 544, 1114, 1239, 1354
BtsIMutI	CAGTG	3 cut(s)	1878, 1941, 2044
BveI	ACCTGC	1 cut(s)	347
Cac8I	GCNNGC	9 cut(s)	52, 89, 143, 231, 368, 1260, 1264, 1446, 1572
CaiI	CAGNNNCTG	1 cut(s)	472
CfoI	GCGC	5 cut(s)	50, 56, 200, 259, 728
Cfr10I	RCCGGY	2 cut(s)	50, 229
Cfr13I	GGNCC	5 cut(s)	359, 605, 1133, 1612, 1661
CseI	GACGC	2 cut(s)	151, 624
Csp6I	GTAC	2 cut(s)	878, 1742
CviAII	CATG	5 cut(s)	620, 661, 858, 874, 1830
CviQI	GTAC	2 cut(s)	878, 1742
DdeI	CTNAG	2 cut(s)	846, 1944
DinI	GGCGCC	3 cut(s)	49, 55, 199
DpnI	GATC	8 cut(s)	171, 1123, 1186, 1690, 1996, 2010, 2048, 2086
DpnII	GATC	8 cut(s)	169, 1121, 1184, 1688, 1994, 2008, 2046, 2084
DraI	TTTAAA	1 cut(s)	1722
DraIII	CACNNNGTG	1 cut(s)	911
Eam1104I	CTCTTC	1 cut(s)	1428
EarI	CTCTTC	1 cut(s)	1428
EciI	GGCGGA	2 cut(s)	105, 296
Ecl136II	GAGCTC	1 cut(s)	1854
Eco130I	CCWWGG	2 cut(s)	600, 873
Eco24I	GRGCYC	1 cut(s)	1856
Eco47I	GGWCC	4 cut(s)	359, 1133, 1612, 1661
Eco53kI	GAGCTC	1 cut(s)	1854
Eco57I	CTGAAG	3 cut(s)	89, 494, 1761
Eco88I	CYCGRG	1 cut(s)	1820
Eco91I	GGTNACC	1 cut(s)	337
EcoICRI	GAGCTC	1 cut(s)	1854
EcoNI	CCTNNNNNAGG	1 cut(s)	1179
EcoO109I	RGGNCCY	3 cut(s)	359, 605, 1612
EcoO65I	GGTNACC	1 cut(s)	337
EcoRII	CCWGG	3 cut(s)	23, 370, 865
EcoT14I	CCWWGG	2 cut(s)	600, 873
EcoT22I	ATGCAT	2 cut(s)	801, 1105
EcoT38I	GRGCYC	1 cut(s)	1856
EgeI	GGCGCC	3 cut(s)	49, 55, 199
EheI	GGCGCC	3 cut(s)	49, 55, 199
ErhI	CCWWGG	2 cut(s)	600, 873
FaeI	CATG	5 cut(s)	623, 664, 861, 877, 1833
FalI	AAGNNNNNCTT	4 cut(s)	1751, 1783, 2063, 2095
FaqI	GGGAC	4 cut(s)	67, 1006, 1598, 1795
FatI	CATG	5 cut(s)	619, 660, 857, 873, 1829
FauI	CCCGC	3 cut(s)	92, 181, 262
FblI	GTMKAC	2 cut(s)	1877, 1934
Fnu4HI	GCNGC	9 cut(s)	39, 77, 92, 146, 196, 467, 792, 1641, 1971
FokI	GGATG	5 cut(s)	509, 531, 1121, 1226, 1341
FriOI	GRGCYC	1 cut(s)	1856
Fsp4HI	GCNGC	9 cut(s)	39, 77, 92, 146, 196, 467, 792, 1641, 1971
GlaI	GCGC	5 cut(s)	49, 55, 199, 258, 727
GluI	GCNGC	9 cut(s)	39, 77, 92, 146, 196, 467, 792, 1641, 1971
GsaI	CCCAGC	1 cut(s)	131
GsuI	CTGGAG	2 cut(s)	609, 663
HaeII	RGCGCY	4 cut(s)	51, 57, 201, 729
HaeIII	GGCC	5 cut(s)	370, 408, 607, 865, 930
HapII	CCGG	4 cut(s)	51, 57, 192, 230
HgaI	GACGC	2 cut(s)	151, 624
HhaI	GCGC	5 cut(s)	50, 56, 200, 259, 728
Hin1I	GRCGYC	4 cut(s)	48, 54, 198, 635
Hin1II	CATG	5 cut(s)	623, 664, 861, 877, 1833
Hin6I	GCGC	5 cut(s)	48, 54, 198, 257, 726
HinP1I	GCGC	5 cut(s)	48, 54, 198, 257, 726
HincII	GTYRAC	3 cut(s)	687, 1813, 1935
HindII	GTYRAC	3 cut(s)	687, 1813, 1935
HinfI	GANTC	3 cut(s)	100, 323, 1823
HpaII	CCGG	4 cut(s)	51, 57, 192, 230
HphI	GGTGA	6 cut(s)	205, 317, 349, 723, 1022, 1401
Hpy166II	GTNNAC	7 cut(s)	687, 993, 1813, 1827, 1878, 1935, 2022
Hpy188III	TCNNGA	6 cut(s)	266, 642, 653, 960, 1577, 2050
Hpy8I	GTNNAC	7 cut(s)	687, 993, 1813, 1827, 1878, 1935, 2022
Hpy99I	CGWCG	3 cut(s)	11, 100, 167
HpyCH4III	ACNGT	5 cut(s)	21, 241, 1362, 1914, 1988
HpyCH4IV	ACGT	1 cut(s)	683
HpyCH4V	TGCA	6 cut(s)	746, 799, 815, 1057, 1103, 1376
HpyF10VI	GCNNNNNNNGC	7 cut(s)	47, 60, 142, 151, 254, 927, 1149
HpyF3I	CTNAG	2 cut(s)	846, 1944
HpySE526I	ACGT	1 cut(s)	683
Hsp92I	GRCGYC	4 cut(s)	48, 54, 198, 635
Hsp92II	CATG	5 cut(s)	623, 664, 861, 877, 1833
HspAI	GCGC	5 cut(s)	48, 54, 198, 257, 726
KasI	GGCGCC	3 cut(s)	47, 53, 197
KroI	GCCGGC	2 cut(s)	50, 229
KroNI	GCCGGC	2 cut(s)	52, 231
Kzo9I	GATC	8 cut(s)	169, 1121, 1184, 1688, 1994, 2008, 2046, 2084
LmnI	GCTCC	1 cut(s)	1390
Lsp1109I	GCAGC	4 cut(s)	478, 803, 1627, 1957
LweI	GCATC	7 cut(s)	553, 824, 1090, 1957, 1957, 2032, 2104
MaeII	ACGT	1 cut(s)	683
MaeIII	GTNAC	2 cut(s)	305, 337
MalI	GATC	8 cut(s)	171, 1123, 1186, 1690, 1996, 2010, 2048, 2086
MboI	GATC	8 cut(s)	169, 1121, 1184, 1688, 1994, 2008, 2046, 2084
MfeI	CAATTG	1 cut(s)	1209
MflI	RGATCY	3 cut(s)	1184, 1688, 1994
MhlI	GDGCHC	4 cut(s)	315, 561, 1395, 1856
MluI	ACGCGT	1 cut(s)	1789
Mly113I	GGCGCC	3 cut(s)	48, 54, 198
MlyI	GAGTC	2 cut(s)	94, 1832
Mph1103I	ATGCAT	2 cut(s)	801, 1105
MreI	CGCCGGCG	2 cut(s)	50, 229
MroNI	GCCGGC	2 cut(s)	50, 229
MroXI	GAANNNNTTC	2 cut(s)	379, 1330
MseI	TTAA	8 cut(s)	243, 1047, 1292, 1551, 1608, 1721, 2070, 2128
MslI	CAYNNNNRTG	3 cut(s)	318, 804, 856
MspA1I	CMGCKG	2 cut(s)	1889, 1954
MspI	CCGG	4 cut(s)	51, 57, 192, 230
MspR9I	CCNGG	3 cut(s)	25, 372, 867
MunI	CAATTG	1 cut(s)	1209
Mva1269I	GAATGC	1 cut(s)	301
MvaI	CCWGG	3 cut(s)	25, 372, 867
MvnI	CGCG	4 cut(s)	41, 257, 891, 1791
MwoI	GCNNNNNNNGC	7 cut(s)	47, 60, 142, 151, 254, 927, 1149
NaeI	GCCGGC	2 cut(s)	52, 231
NarI	GGCGCC	3 cut(s)	48, 54, 198
NcoI	CCATGG	1 cut(s)	873
NdeII	GATC	8 cut(s)	169, 1121, 1184, 1688, 1994, 2008, 2046, 2084
NgoMIV	GCCGGC	2 cut(s)	50, 229
NheI	GCTAGC	1 cut(s)	1444
NlaIII	CATG	5 cut(s)	623, 664, 861, 877, 1833
NlaIV	GGNNCC	7 cut(s)	49, 55, 199, 606, 871, 1614, 1996
NmeAIII	GCCGAG	2 cut(s)	157, 184
NmuCI	GTSAC	2 cut(s)	305, 337
NsiI	ATGCAT	2 cut(s)	801, 1105
NspI	RCATGY	1 cut(s)	861
PciI	ACATGT	1 cut(s)	857
PcsI	WCGNNNNNNNCGW	1 cut(s)	315
PctI	GAATGC	1 cut(s)	301
PdiI	GCCGGC	2 cut(s)	52, 231
PdmI	GAANNNNTTC	2 cut(s)	379, 1330
PfeI	GAWTC	1 cut(s)	323
PflFI	GACNNNGTC	1 cut(s)	19
PflMI	CCANNNNNTGG	1 cut(s)	1455
PkrI	GCNGC	9 cut(s)	40, 78, 93, 147, 197, 468, 793, 1642, 1972
PleI	GAGTC	2 cut(s)	94, 1831
PluTI	GGCGCC	3 cut(s)	51, 57, 201
PpsI	GAGTC	2 cut(s)	94, 1831
PpuMI	RGGWCCY	2 cut(s)	359, 1612
PscI	ACATGT	1 cut(s)	857
PshBI	ATTAAT	1 cut(s)	1551
Psp124BI	GAGCTC	1 cut(s)	1856
Psp5II	RGGWCCY	2 cut(s)	359, 1612
Psp6I	CCWGG	3 cut(s)	23, 370, 865
PspEI	GGTNACC	1 cut(s)	337
PspFI	CCCAGC	1 cut(s)	127
PspGI	CCWGG	3 cut(s)	23, 370, 865
PspN4I	GGNNCC	7 cut(s)	49, 55, 199, 606, 871, 1614, 1996
PspPI	GGNCC	5 cut(s)	359, 605, 1133, 1612, 1661
PspPPI	RGGWCCY	2 cut(s)	359, 1612
PstNI	CAGNNNCTG	1 cut(s)	472
PsuI	RGATCY	3 cut(s)	1184, 1688, 1994
PsyI	GACNNNGTC	1 cut(s)	19
PvuII	CAGCTG	1 cut(s)	1954
RsaI	GTAC	2 cut(s)	879, 1743
RsaNI	GTAC	2 cut(s)	878, 1742
RseI	CAYNNNNRTG	3 cut(s)	318, 804, 856
SacI	GAGCTC	1 cut(s)	1856
SalI	GTCGAC	1 cut(s)	1933
SaqAI	TTAA	8 cut(s)	243, 1047, 1292, 1551, 1608, 1721, 2070, 2128
SatI	GCNGC	9 cut(s)	39, 77, 92, 146, 196, 467, 792, 1641, 1971
Sau3AI	GATC	8 cut(s)	169, 1121, 1184, 1688, 1994, 2008, 2046, 2084
Sau96I	GGNCC	5 cut(s)	359, 605, 1133, 1612, 1661
SchI	GAGTC	2 cut(s)	94, 1832
ScrFI	CCNGG	3 cut(s)	25, 372, 867
SduI	GDGCHC	4 cut(s)	315, 561, 1395, 1856
SfaNI	GCATC	7 cut(s)	553, 824, 1090, 1957, 1957, 2032, 2104
SfoI	GGCGCC	3 cut(s)	49, 55, 199
SgrAI	CRCCGGYG	2 cut(s)	50, 229
SinI	GGWCC	4 cut(s)	359, 1133, 1612, 1661
SmiMI	CAYNNNNRTG	3 cut(s)	318, 804, 856
SmlI	CTYRAG	2 cut(s)	1341, 1577
SmoI	CTYRAG	2 cut(s)	1341, 1577
SspDI	GGCGCC	3 cut(s)	47, 53, 197
SstI	GAGCTC	1 cut(s)	1856
StyD4I	CCNGG	3 cut(s)	23, 370, 865
StyI	CCWWGG	2 cut(s)	600, 873
TaaI	ACNGT	5 cut(s)	21, 241, 1362, 1914, 1988
TaiI	ACGT	1 cut(s)	686
TaqI	TCGA	1 cut(s)	1934
TauI	GCSGC	5 cut(s)	41, 79, 94, 148, 198
TfiI	GAWTC	1 cut(s)	323
Tru1I	TTAA	8 cut(s)	243, 1047, 1292, 1551, 1608, 1721, 2070, 2128
Tru9I	TTAA	8 cut(s)	243, 1047, 1292, 1551, 1608, 1721, 2070, 2128
TscAI	CASTG	3 cut(s)	1878, 1948, 2044
TseFI	GTSAC	2 cut(s)	305, 337
TseI	GCWGC	4 cut(s)	466, 791, 1640, 1970
Tsp45I	GTSAC	2 cut(s)	305, 337
TspDTI	ATGAA	6 cut(s)	285, 513, 817, 923, 1187, 1343
TspGWI	ACGGA	1 cut(s)	1906
TspRI	CASTG	3 cut(s)	1878, 1948, 2044
Tth111I	GACNNNGTC	1 cut(s)	19
Van91I	CCANNNNNTGG	1 cut(s)	1455
VpaK11BI	GGWCC	4 cut(s)	359, 1133, 1612, 1661
VspI	ATTAAT	1 cut(s)	1551
XagI	CCTNNNNNAGG	1 cut(s)	1179
XapI	RAATTY	5 cut(s)	648, 1231, 1250, 1273, 1405
XbaI	TCTAGA	1 cut(s)	959
XceI	RCATGY	1 cut(s)	861
XcmI	CCANNNNNNNNNTGG	1 cut(s)	858
XmiI	GTMKAC	2 cut(s)	1877, 1934
XmnI	GAANNNNTTC	2 cut(s)	379, 1330
Zsp2I	ATGCAT	2 cut(s)	801, 1105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.