Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0005381

Physical Location & Seq

Genomic Coordinates Forward (+)

19431444 .. 19433260

Gene Structure 1817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G213900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGGCTATAGAGATTGAGCAGCCTTCTGTCGGGCTATCAAAGATAGCTGTTTCTGATACTCATGGAGAAGACTCTCCATACTTTGCAGGCTGGAAAGCATATGATCAAGACCCTTATAATCAATCAACTAACCCTTCTGGTGTCATACAGATGGGGCTGGCAGAGAATCAAGTTTCATTTGATTTGTTGGAAAAGTACTTGGAAGAGCACTCAGAAGCTTCCAAATGGGGATCAAAAGGAGTGCCTTGCTTTAGAGAAAATGCCTTGTTTCAAGATTACCATGGCCTTGTGTCTTTCAGAAAGGCAATGGCAAGTTTCATGGGACAAATCAGAGGAGGAAGAGCCAAATTTGACCCTGATAGAATTGTCCTAACTGCAGGTGCAACTGCAGCCAATGAGCTTTTAACTTTCATTATAGCTGATCCTGGTGATGCTTTGCTTGTGCCAACCCCATACTATCCGGGATTTGATAGAGATTTAAGGTGGAGGACTGGTGTGAATATTGTACCAATTCACTGTGACAGCTCAAACAATTTCCAGATAACTCCTCAAGCTTTGGAAGCTGCATACAAAGATGCAGAAGCCAAGAACATGAGACTGAGAGGGGTACTAATCACAAATCCTTCAAACCCTTTAGGTGCAACAATCCAAAGAGTAGTTCTTGAAGAGATTCTTGATTTTGTTACCTCCAAAAACATCCATCTTGTCTCTGATGAAATCTATTCGGGGTCCACCTTCTCATCCTCTGCATTCGTGAGCATTGCAGAGATTCTTGAAGCCAGGCAGTACAAGAATTCAGAAAGAGTTCACATTGTTTATAGCCTTTCCAAAGACCTTGGCCTTCCGGGATTTAGAATTGGCACCGTGTACTCGTACAATGACAAGGTTGTAACAACAGCAAGAAGGATGTCAAGCTTCACCTTAATATCTTCTCAAACACAACATCTCTTGGCTTCCATGTTGTCTGATAAGGAATTCACTGAAAATTACATAAAGACAAACAGAGAGAGACTGAGGAAGAGATATGATATGATCATTGAAGGGTTGAAGAAAGCTGGGATTGAGTGTTTGAAAGGAAATGCTGGGTTGTTTTGCTGGATGAATTTAAGTCCACTCTTAGAGAAACCAACAAGAGGAGGTGAACTGGCTCTTTGGGACTCTATGCTGCATGAAGTGAAGTTAAATATATCTCCAGGCTCTTCTTGCCACTGCTCTGAACCAGGTTGGTTTAGGGTGTGTTTTGCCAACATGAGTGAGCAGACACTTGAAATTGCTCTCAAAAGAATACATAATTTCATGGAACGAAGACAGAGAAGTTGGAATCTATTTTCATCTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0006082 GO:0006520 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009692 GO:0009693 GO:0009987 GO:0010817 GO:0016053 GO:0016829 GO:0016846 GO:0016847 GO:0018871 GO:0019752 GO:0032787 GO:0042218 GO:0042445 GO:0042446 GO:0042802 GO:0043436 GO:0043449 GO:0043450 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1900673 GO:1900674 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 ko01110 map00270 map01100 map01110

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

447

Amino Acids

50.09

Weight (kDa)

6.39

Isoelectric Point (pI)

50.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005381)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26200
fragaria_vesca	FvH4_1g06950 FvH4_1g06950 FvH4_1g06950 FvH4_1g06950 FvH4_1g06950
malus_domestica	MD02G1073800.v1.1 MD02G1073900.v1.1 MD15G1203500.v1.1
prunus_persica	Prupe.7G213800_v2.0.a1 Prupe.7G213900_v2.0.a1
pyrus_communis	pycom02g05820 pycom02g05830 pycom15g18050
rosa_chinensis	RchiOBHm_Chr2g0092901 RchiOBHm_Chr2g0092911
rosa_laevigata	RLG00000016344 RLG00000016346
rosa_multiflora	Rmu_sc0000965.1_g000001 Rmu_sc0014880.1_g000003 Rmu_sc0022236.1_g000001
rosa_rugosa	Rorug02G0030000
rosa_samantha	Rh2AG075800 Rh2AG075900 Rh2BG077200 Rh2CG079500 Rh2DG074600
rosa_wichuraiana	Rw2G007020 Rw2G007030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	117
AarI	CACCTGC	1 cut(s)	368
Acc36I	ACCTGC	1 cut(s)	368
AccB1I	GGYRCC	1 cut(s)	860
AclWI	GGATC	2 cut(s)	238, 416
AcsI	RAATTY	4 cut(s)	347, 793, 974, 1102
AfaI	GTAC	6 cut(s)	197, 507, 609, 788, 869, 875
AfiI	CCNNNNNNNGG	2 cut(s)	29, 1133
AgsI	TTSAA	8 cut(s)	272, 627, 665, 776, 1040, 1048, 1072, 1268
AjnI	CCWGG	4 cut(s)	424, 779, 1192, 1219
AjuI	GAANNNNNNNTTGG	2 cut(s)	642, 674
AluBI	AGCT	9 cut(s)	47, 218, 400, 419, 525, 554, 563, 915, 1055
AluI	AGCT	9 cut(s)	47, 218, 400, 419, 525, 554, 563, 915, 1055
Alw21I	GWGCWC	1 cut(s)	210
Alw26I	GTCTC	3 cut(s)	589, 712, 1003
AlwI	GGATC	2 cut(s)	238, 416
AoxI	GGCC	2 cut(s)	283, 838
ApeKI	GCWGC	4 cut(s)	19, 389, 563, 1165
ApoI	RAATTY	4 cut(s)	347, 793, 974, 1102
Asp700I	GAANNNNTTC	2 cut(s)	669, 804
AspS9I	GGNCC	1 cut(s)	729
AsuC2I	CCSGG	2 cut(s)	462, 846
AsuHPI	GGTGA	3 cut(s)	440, 910, 1151
AvaII	GGWCC	1 cut(s)	729
BanI	GGYRCC	1 cut(s)	860
BbsI	GAAGAC	2 cut(s)	75, 1312
Bbv12I	GWGCWC	1 cut(s)	210
BbvI	GCAGC	4 cut(s)	31, 401, 550, 1152
BccI	CCATC	2 cut(s)	145, 708
BciT130I	CCWGG	4 cut(s)	426, 781, 1194, 1221
BclI	TGATCA	2 cut(s)	103, 1032
BcnI	CCSGG	2 cut(s)	462, 846
BcoDI	GTCTC	3 cut(s)	589, 712, 1003
BfmI	CTRYAG	3 cut(s)	6, 375, 387
BfuAI	ACCTGC	1 cut(s)	368
BisI	GCNGC	4 cut(s)	20, 390, 564, 1166
BlsI	GCNGC	4 cut(s)	21, 391, 565, 1167
BmcAI	AGTACT	1 cut(s)	197
Bme1390I	CCNGG	6 cut(s)	426, 462, 781, 846, 1194, 1221
Bme18I	GGWCC	1 cut(s)	729
BmgT120I	GGNCC	1 cut(s)	729
BmiI	GGNNCC	2 cut(s)	730, 862
BmrFI	CCNGG	6 cut(s)	426, 462, 781, 846, 1194, 1221
BmsI	GCATC	2 cut(s)	421, 565
BpiI	GAAGAC	2 cut(s)	75, 1312
BpmI	CTGGAG	1 cut(s)	1176
BpuEI	CTTGAG	1 cut(s)	534
BpuMI	CCSGG	2 cut(s)	462, 846
BsaJI	CCNNGG	2 cut(s)	280, 835
BsaXI	ACNNNNNCTCC	2 cut(s)	478, 508
Bsc4I	CCNNNNNNNGG	2 cut(s)	29, 1133
Bse1I	ACTGG	2 cut(s)	496, 1149
Bse3DI	GCAATG	2 cut(s)	312, 759
BseBI	CCWGG	4 cut(s)	426, 781, 1194, 1221
BseDI	CCNNGG	2 cut(s)	280, 835
BseGI	GGATG	4 cut(s)	696, 740, 912, 1104
BseLI	CCNNNNNNNGG	2 cut(s)	29, 1133
BseMI	GCAATG	2 cut(s)	312, 759
BseMII	CTCAG	3 cut(s)	225, 590, 1004
BseNI	ACTGG	2 cut(s)	496, 1149
BseRI	GAGGAG	3 cut(s)	348, 537, 1149
BseXI	GCAGC	4 cut(s)	31, 401, 550, 1152
BseYI	CCCAGC	2 cut(s)	1055, 1082
BshFI	GGCC	2 cut(s)	285, 840
BshNI	GGYRCC	1 cut(s)	860
BsiHKAI	GWGCWC	1 cut(s)	210
BsiSI	CCGG	2 cut(s)	461, 845
BslFI	GGGAC	2 cut(s)	336, 1169
BslI	CCNNNNNNNGG	2 cut(s)	29, 1133
BsmAI	GTCTC	3 cut(s)	589, 712, 1003
BsmFI	GGGAC	2 cut(s)	336, 1169
BsmI	GAATGC	1 cut(s)	749
BsnI	GGCC	2 cut(s)	285, 840
Bsp1286I	GDGCHC	1 cut(s)	210
Bsp143I	GATC	4 cut(s)	103, 230, 421, 1032
Bsp19I	CCATGG	1 cut(s)	280
BspANI	GGCC	2 cut(s)	285, 840
BspCNI	CTCAG	3 cut(s)	224, 591, 1005
BspLI	GGNNCC	2 cut(s)	730, 862
BspMAI	CTGCAG	2 cut(s)	379, 391
BspMI	ACCTGC	1 cut(s)	368
BspPI	GGATC	2 cut(s)	238, 416
BspQI	GCTCTTC	3 cut(s)	198, 334, 1204
BspT107I	GGYRCC	1 cut(s)	860
BsrDI	GCAATG	2 cut(s)	312, 759
BsrI	ACTGG	2 cut(s)	496, 1149
BssECI	CCNNGG	2 cut(s)	280, 835
BssMI	GATC	4 cut(s)	103, 230, 421, 1032
BssT1I	CCWWGG	2 cut(s)	280, 835
Bst2UI	CCWGG	4 cut(s)	426, 781, 1194, 1221
Bst4CI	ACNGT	2 cut(s)	518, 865
Bst6I	CTCTTC	5 cut(s)	198, 334, 660, 1013, 1204
BstC8I	GCNNGC	2 cut(s)	88, 159
BstDEI	CTNAG	4 cut(s)	211, 599, 1013, 1117
BstDSI	CCRYGG	1 cut(s)	280
BstF5I	GGATG	4 cut(s)	696, 740, 912, 1104
BstKTI	GATC	4 cut(s)	106, 233, 424, 1035
BstMAI	GTCTC	3 cut(s)	589, 712, 1003
BstMBI	GATC	4 cut(s)	103, 230, 421, 1032
BstMWI	GCNNNNNNNGC	3 cut(s)	389, 560, 1203
BstNI	CCWGG	4 cut(s)	426, 781, 1194, 1221
BstSCI	CCNGG	6 cut(s)	424, 460, 779, 844, 1192, 1219
BstSFI	CTRYAG	3 cut(s)	6, 375, 387
BstV1I	GCAGC	4 cut(s)	31, 401, 550, 1152
BstV2I	GAAGAC	2 cut(s)	75, 1312
BsuRI	GGCC	2 cut(s)	285, 840
BtgI	CCRYGG	1 cut(s)	280
BtsCI	GGATG	4 cut(s)	696, 740, 912, 1104
BtsI	GCAGTG	1 cut(s)	1207
BtsIMutI	CAGTG	3 cut(s)	514, 978, 1207
BveI	ACCTGC	1 cut(s)	368
Cac8I	GCNNGC	2 cut(s)	88, 159
Cfr13I	GGNCC	1 cut(s)	729
CsiI	ACCWGGT	1 cut(s)	1219
Csp6I	GTAC	6 cut(s)	196, 506, 608, 787, 868, 874
CviAII	CATG	8 cut(s)	62, 281, 319, 592, 958, 1169, 1249, 1297
CviQI	GTAC	6 cut(s)	196, 506, 608, 787, 868, 874
DdeI	CTNAG	4 cut(s)	211, 599, 1013, 1117
DpnI	GATC	4 cut(s)	105, 232, 423, 1034
DpnII	GATC	4 cut(s)	103, 230, 421, 1032
Eam1104I	CTCTTC	5 cut(s)	198, 334, 660, 1013, 1204
EarI	CTCTTC	5 cut(s)	198, 334, 660, 1013, 1204
Eco130I	CCWWGG	2 cut(s)	280, 835
Eco47I	GGWCC	1 cut(s)	729
EcoRI	GAATTC	2 cut(s)	793, 974
EcoRII	CCWGG	4 cut(s)	424, 779, 1192, 1219
EcoT14I	CCWWGG	2 cut(s)	280, 835
ErhI	CCWWGG	2 cut(s)	280, 835
FaeI	CATG	8 cut(s)	65, 284, 322, 595, 961, 1172, 1252, 1300
FalI	AAGNNNNNCTT	2 cut(s)	657, 689
FaqI	GGGAC	2 cut(s)	336, 1169
FatI	CATG	8 cut(s)	61, 280, 318, 591, 957, 1168, 1248, 1296
FauNDI	CATATG	1 cut(s)	100
FbaI	TGATCA	2 cut(s)	103, 1032
Fnu4HI	GCNGC	4 cut(s)	20, 390, 564, 1166
FokI	GGATG	4 cut(s)	683, 727, 919, 1111
Fsp4HI	GCNGC	4 cut(s)	20, 390, 564, 1166
GluI	GCNGC	4 cut(s)	20, 390, 564, 1166
GsaI	CCCAGC	2 cut(s)	1059, 1086
GsuI	CTGGAG	1 cut(s)	1176
HaeIII	GGCC	2 cut(s)	285, 840
HapII	CCGG	2 cut(s)	461, 845
Hin1II	CATG	8 cut(s)	65, 284, 322, 595, 961, 1172, 1252, 1300
HindIII	AAGCTT	3 cut(s)	216, 552, 913
HinfI	GANTC	6 cut(s)	71, 166, 670, 769, 1157, 1321
HpaII	CCGG	2 cut(s)	461, 845
HphI	GGTGA	3 cut(s)	440, 910, 1151
Hpy166II	GTNNAC	5 cut(s)	732, 808, 868, 1112, 1142
Hpy188I	TCNGA	8 cut(s)	55, 214, 299, 332, 712, 799, 967, 1216
Hpy188III	TCNNGA	7 cut(s)	107, 272, 538, 662, 674, 754, 773
Hpy8I	GTNNAC	5 cut(s)	732, 808, 868, 1112, 1142
HpyAV	CCTTC	7 cut(s)	33, 144, 633, 745, 851, 897, 1034
HpyCH4III	ACNGT	2 cut(s)	518, 865
HpyF10VI	GCNNNNNNNGC	3 cut(s)	389, 560, 1203
HpyF3I	CTNAG	4 cut(s)	211, 599, 1013, 1117
Hsp92II	CATG	8 cut(s)	65, 284, 322, 595, 961, 1172, 1252, 1300
Ksp22I	TGATCA	2 cut(s)	103, 1032
Kzo9I	GATC	4 cut(s)	103, 230, 421, 1032
LguI	GCTCTTC	3 cut(s)	198, 334, 1204
Lsp1109I	GCAGC	4 cut(s)	31, 401, 550, 1152
LweI	GCATC	2 cut(s)	421, 565
MabI	ACCWGGT	1 cut(s)	1219
MaeIII	GTNAC	3 cut(s)	518, 682, 889
MalI	GATC	4 cut(s)	105, 232, 423, 1034
MboI	GATC	4 cut(s)	103, 230, 421, 1032
MboII	GAAGA	9 cut(s)	80, 215, 351, 677, 921, 1030, 1060, 1191, 1317
MhlI	GDGCHC	1 cut(s)	210
MlyI	GAGTC	2 cut(s)	65, 1151
MmeI	TCCRAC	2 cut(s)	168, 1298
MroXI	GAANNNNTTC	2 cut(s)	669, 804
MseI	TTAA	5 cut(s)	404, 479, 923, 1106, 1181
MslI	CAYNNNNRTG	1 cut(s)	149
MspI	CCGG	2 cut(s)	461, 845
MspR9I	CCNGG	6 cut(s)	426, 462, 781, 846, 1194, 1221
Mva1269I	GAATGC	1 cut(s)	749
MvaI	CCWGG	4 cut(s)	426, 781, 1194, 1221
MwoI	GCNNNNNNNGC	3 cut(s)	389, 560, 1203
NciI	CCSGG	2 cut(s)	462, 846
NcoI	CCATGG	1 cut(s)	280
NdeI	CATATG	1 cut(s)	100
NdeII	GATC	4 cut(s)	103, 230, 421, 1032
NlaIII	CATG	8 cut(s)	65, 284, 322, 595, 961, 1172, 1252, 1300
NlaIV	GGNNCC	2 cut(s)	730, 862
NmuCI	GTSAC	1 cut(s)	518
PaqCI	CACCTGC	1 cut(s)	368
PciSI	GCTCTTC	3 cut(s)	198, 334, 1204
PctI	GAATGC	1 cut(s)	749
PdmI	GAANNNNTTC	2 cut(s)	669, 804
PfeI	GAWTC	4 cut(s)	166, 670, 769, 1321
PfoI	TCCNGGA	2 cut(s)	460, 844
PkrI	GCNGC	4 cut(s)	21, 391, 565, 1167
PleI	GAGTC	2 cut(s)	65, 1151
PpsI	GAGTC	2 cut(s)	65, 1151
PsiI	TTATAA	1 cut(s)	117
Psp6I	CCWGG	4 cut(s)	424, 779, 1192, 1219
PspFI	CCCAGC	2 cut(s)	1055, 1082
PspGI	CCWGG	4 cut(s)	424, 779, 1192, 1219
PspN4I	GGNNCC	2 cut(s)	730, 862
PspPI	GGNCC	1 cut(s)	729
PstI	CTGCAG	2 cut(s)	379, 391
RsaI	GTAC	6 cut(s)	197, 507, 609, 788, 869, 875
RsaNI	GTAC	6 cut(s)	196, 506, 608, 787, 868, 874
RseI	CAYNNNNRTG	1 cut(s)	149
SapI	GCTCTTC	3 cut(s)	198, 334, 1204
SaqAI	TTAA	5 cut(s)	404, 479, 923, 1106, 1181
SatI	GCNGC	4 cut(s)	20, 390, 564, 1166
Sau3AI	GATC	4 cut(s)	103, 230, 421, 1032
Sau96I	GGNCC	1 cut(s)	729
ScaI	AGTACT	1 cut(s)	197
SchI	GAGTC	2 cut(s)	65, 1151
ScrFI	CCNGG	6 cut(s)	426, 462, 781, 846, 1194, 1221
SduI	GDGCHC	1 cut(s)	210
SexAI	ACCWGGT	1 cut(s)	1219
SfaNI	GCATC	2 cut(s)	421, 565
SfcI	CTRYAG	3 cut(s)	6, 375, 387
SinI	GGWCC	1 cut(s)	729
SmiMI	CAYNNNNRTG	1 cut(s)	149
SmlI	CTYRAG	1 cut(s)	549
SmoI	CTYRAG	1 cut(s)	549
SspI	AATATT	1 cut(s)	502
StyD4I	CCNGG	6 cut(s)	424, 460, 779, 844, 1192, 1219
StyI	CCWWGG	2 cut(s)	280, 835
TaaI	ACNGT	2 cut(s)	518, 865
TatI	WGTACW	3 cut(s)	195, 786, 867
TfiI	GAWTC	4 cut(s)	166, 670, 769, 1321
Tru1I	TTAA	5 cut(s)	404, 479, 923, 1106, 1181
Tru9I	TTAA	5 cut(s)	404, 479, 923, 1106, 1181
TscAI	CASTG	3 cut(s)	521, 985, 1214
TseFI	GTSAC	1 cut(s)	518
TseI	GCWGC	4 cut(s)	19, 389, 563, 1165
Tsp45I	GTSAC	1 cut(s)	518
TspDTI	ATGAA	8 cut(s)	165, 307, 400, 729, 1115, 1185, 1285, 1320
TspRI	CASTG	3 cut(s)	521, 985, 1214
VpaK11BI	GGWCC	1 cut(s)	729
XapI	RAATTY	4 cut(s)	347, 793, 974, 1102
XmnI	GAANNNNTTC	2 cut(s)	669, 804
ZrmI	AGTACT	1 cut(s)	197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.