Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009948

Physical Location & Seq

Genomic Coordinates Reverse (-)

19486365 .. 19489914

Gene Structure 3550 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G215100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 594 bp

ATGAAGAAGCTAGCGAGACAATTGAGGAAGTCACAGGACGATGACTTCTCTCTCCCTACTTGGGACGACCCTACTCTCAACGATTCTCGTCCCCTAGACATTCAAGAACAAGAAGAGTTGGTGCGTTCATTCGAGAAGAGTCAAGCTCAGCAGAGTCGTTTCTGGAGGCTTTTGTTTGCATCACTTCTCTTTTGCTTCTCTGCGTTTCTGTTATACTCGATCTTCCAGCAGGTTTTGTCTCCATGGGAATTGCGGTATCATGCTTACTTCATGGAGGAGGTGCACTCATGGATGATTATATCAGCAGATTGGCTAGCTGTTTTAGCATGTTCATCAGCCATCATAGGATTACTTCATGATTCAAAGCATCACCGGCGATGGATTTGGTACTCGCTATTTACTGGCATTATACTCACAGTTTTTTGGTTGTATTACATGTTGAGATTGCCAAGGTTCCGCTGGGATGTAATCTGGCTTCCATTTGGACCTCTAAGTGGAGCAGGACTCACTCTGTATGTCGATCATCTACTAATTGAGTCATCAGAAGAAATAAGAAAACTTCGAGGCTACATGTATGCTTACAAAGCTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

198

Amino Acids

23.59

Weight (kDa)

7.01

Isoelectric Point (pI)

66.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009948)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26240
fragaria_vesca	FvH4_1g06740
malus_domestica	MD02G1072300.v1.1 MD15G1202100.v1.1
prunus_persica	Prupe.7G215100_v2.0.a1
pyrus_communis	pycom02g05630 pycom15g17950
rosa_chinensis	RchiOBHm_Chr2g0092481 RchiOBHm_Chr7g0226351
rosa_laevigata	RLG00000016317
rosa_multiflora	Rmu_sc0002503.1_g000015 Rmu_sc0002503.1_g000016 Rmu_sc0023787.1_g000004
rosa_roxburghii	Rroxscaffold_2G00149060
rosa_rugosa	Rorug02G0026900 Rorug02G0027100
rosa_samantha	Rh2AG072800 Rh2BG073400 Rh2DG071400 Rh2DG071500
rosa_wichuraiana	Rw2G006010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	220
AciI	CCGC	2 cut(s)	253, 457
AfaI	GTAC	1 cut(s)	389
AfiI	CCNNNNNNNGG	2 cut(s)	61, 494
AflIII	ACRYGT	2 cut(s)	435, 570
AgsI	TTSAA	2 cut(s)	104, 363
AluBI	AGCT	5 cut(s)	10, 146, 317, 587, 591
AluI	AGCT	5 cut(s)	10, 146, 317, 587, 591
Alw21I	GWGCWC	1 cut(s)	285
Alw26I	GTCTC	2 cut(s)	10, 243
Alw44I	GTGCAC	1 cut(s)	281
ApaLI	GTGCAC	1 cut(s)	281
AspS9I	GGNCC	1 cut(s)	485
AsuHPI	GGTGA	1 cut(s)	362
AsuNHI	GCTAGC	3 cut(s)	10, 313, 587
AvaII	GGWCC	1 cut(s)	485
BaeGI	GKGCMC	1 cut(s)	285
BarI	GAAGNNNNNNTAC	2 cut(s)	459, 491
Bbv12I	GWGCWC	1 cut(s)	285
BccI	CCATC	2 cut(s)	347, 372
BcoDI	GTCTC	2 cut(s)	10, 243
BfaI	CTAG	4 cut(s)	11, 95, 314, 588
BfuAI	ACCTGC	1 cut(s)	220
BlpI	GCTNAGC	1 cut(s)	147
Bme18I	GGWCC	1 cut(s)	485
BmgT120I	GGNCC	1 cut(s)	485
BmiI	GGNNCC	1 cut(s)	455
BmsI	GCATC	2 cut(s)	188, 376
BmtI	GCTAGC	3 cut(s)	14, 317, 591
BplI	GAGNNNNNCTC	6 cut(s)	130, 162, 269, 301, 489, 521
BpmI	CTGGAG	1 cut(s)	184
Bpu1102I	GCTNAGC	1 cut(s)	147
BsaJI	CCNNGG	2 cut(s)	242, 449
Bsc4I	CCNNNNNNNGG	2 cut(s)	61, 494
Bse118I	RCCGGY	1 cut(s)	372
Bse1I	ACTGG	1 cut(s)	406
BseDI	CCNNGG	2 cut(s)	242, 449
BseGI	GGATG	2 cut(s)	297, 469
BseLI	CCNNNNNNNGG	2 cut(s)	61, 494
BseMII	CTCAG	1 cut(s)	161
BseNI	ACTGG	1 cut(s)	406
BseRI	GAGGAG	1 cut(s)	290
BseSI	GKGCMC	1 cut(s)	285
BseYI	CCCAGC	1 cut(s)	459
BsiHKAI	GWGCWC	1 cut(s)	285
BsiSI	CCGG	1 cut(s)	373
BslFI	GGGAC	2 cut(s)	75, 77
BslI	CCNNNNNNNGG	2 cut(s)	61, 494
BsmAI	GTCTC	2 cut(s)	10, 243
BsmFI	GGGAC	2 cut(s)	75, 77
Bsp1286I	GDGCHC	1 cut(s)	285
Bsp143I	GATC	2 cut(s)	219, 520
Bsp1720I	GCTNAGC	1 cut(s)	147
Bsp19I	CCATGG	1 cut(s)	242
BspACI	CCGC	2 cut(s)	253, 457
BspCNI	CTCAG	1 cut(s)	160
BspHI	TCATGA	1 cut(s)	355
BspLI	GGNNCC	1 cut(s)	455
BspMI	ACCTGC	1 cut(s)	220
BspOI	GCTAGC	3 cut(s)	14, 317, 591
BsrFI	RCCGGY	1 cut(s)	372
BsrI	ACTGG	1 cut(s)	406
BssAI	RCCGGY	1 cut(s)	372
BssECI	CCNNGG	2 cut(s)	242, 449
BssMI	GATC	2 cut(s)	219, 520
BssT1I	CCWWGG	2 cut(s)	242, 449
Bst4CI	ACNGT	1 cut(s)	418
Bst6I	CTCTTC	2 cut(s)	108, 131
BstC8I	GCNNGC	3 cut(s)	12, 315, 589
BstDEI	CTNAG	2 cut(s)	147, 491
BstDSI	CCRYGG	1 cut(s)	242
BstF5I	GGATG	2 cut(s)	297, 469
BstKTI	GATC	2 cut(s)	222, 523
BstMAI	GTCTC	2 cut(s)	10, 243
BstMBI	GATC	2 cut(s)	219, 520
BstMWI	GCNNNNNNNGC	3 cut(s)	323, 373, 584
BstNSI	RCATGY	3 cut(s)	330, 439, 574
BstSLI	GKGCMC	1 cut(s)	285
BtgI	CCRYGG	1 cut(s)	242
BtgZI	GCGATG	1 cut(s)	391
BtsCI	GGATG	2 cut(s)	297, 469
BveI	ACCTGC	1 cut(s)	220
Cac8I	GCNNGC	3 cut(s)	12, 315, 589
CciI	TCATGA	1 cut(s)	355
Cfr10I	RCCGGY	1 cut(s)	372
Cfr13I	GGNCC	1 cut(s)	485
Csp6I	GTAC	1 cut(s)	388
CviAII	CATG	8 cut(s)	243, 260, 271, 288, 327, 356, 436, 571
CviQI	GTAC	1 cut(s)	388
DdeI	CTNAG	2 cut(s)	147, 491
DpnI	GATC	2 cut(s)	221, 522
DpnII	GATC	2 cut(s)	219, 520
Eam1104I	CTCTTC	2 cut(s)	108, 131
EarI	CTCTTC	2 cut(s)	108, 131
Eco130I	CCWWGG	2 cut(s)	242, 449
Eco47I	GGWCC	1 cut(s)	485
EcoT14I	CCWWGG	2 cut(s)	242, 449
ErhI	CCWWGG	2 cut(s)	242, 449
FaeI	CATG	8 cut(s)	246, 263, 274, 291, 330, 359, 439, 574
FaqI	GGGAC	2 cut(s)	75, 77
FatI	CATG	8 cut(s)	242, 259, 270, 287, 326, 355, 435, 570
FokI	GGATG	2 cut(s)	304, 476
FspBI	CTAG	4 cut(s)	11, 95, 314, 588
GsaI	CCCAGC	1 cut(s)	463
GsuI	CTGGAG	1 cut(s)	184
HapII	CCGG	1 cut(s)	373
Hin1II	CATG	8 cut(s)	246, 263, 274, 291, 330, 359, 439, 574
HinfI	GANTC	6 cut(s)	83, 139, 154, 359, 504, 536
HpaII	CCGG	1 cut(s)	373
HphI	GGTGA	1 cut(s)	362
Hpy166II	GTNNAC	1 cut(s)	283
Hpy188I	TCNGA	1 cut(s)	544
Hpy188III	TCNNGA	4 cut(s)	104, 133, 163, 356
Hpy8I	GTNNAC	1 cut(s)	283
HpyCH4III	ACNGT	1 cut(s)	418
HpyCH4V	TGCA	2 cut(s)	179, 283
HpyF10VI	GCNNNNNNNGC	3 cut(s)	323, 373, 584
HpyF3I	CTNAG	2 cut(s)	147, 491
Hsp92II	CATG	8 cut(s)	246, 263, 274, 291, 330, 359, 439, 574
Kzo9I	GATC	2 cut(s)	219, 520
LmnI	GCTCC	1 cut(s)	497
LpnPI	CCDG	9 cut(s)	20, 148, 215, 239, 386, 387, 445, 457, 486
LweI	GCATC	2 cut(s)	188, 376
MaeI	CTAG	4 cut(s)	11, 95, 314, 588
MaeIII	GTNAC	1 cut(s)	30
MalI	GATC	2 cut(s)	221, 522
MboI	GATC	2 cut(s)	219, 520
MboII	GAAGA	5 cut(s)	16, 125, 148, 214, 557
MfeI	CAATTG	1 cut(s)	20
MhlI	GDGCHC	1 cut(s)	285
MluCI	AATT	3 cut(s)	20, 248, 531
MlyI	GAGTC	4 cut(s)	148, 163, 498, 545
MnlI	CCTC	6 cut(s)	18, 159, 268, 271, 498, 557
MspA1I	CMGCKG	1 cut(s)	459
MspI	CCGG	1 cut(s)	373
MunI	CAATTG	1 cut(s)	20
MwoI	GCNNNNNNNGC	3 cut(s)	323, 373, 584
NcoI	CCATGG	1 cut(s)	242
NdeII	GATC	2 cut(s)	219, 520
NheI	GCTAGC	3 cut(s)	10, 313, 587
NlaIII	CATG	8 cut(s)	246, 263, 274, 291, 330, 359, 439, 574
NlaIV	GGNNCC	1 cut(s)	455
NmuCI	GTSAC	1 cut(s)	30
NspI	RCATGY	3 cut(s)	330, 439, 574
PagI	TCATGA	1 cut(s)	355
PciI	ACATGT	2 cut(s)	435, 570
PfeI	GAWTC	2 cut(s)	83, 359
PleI	GAGTC	4 cut(s)	147, 162, 498, 544
PpsI	GAGTC	4 cut(s)	147, 162, 498, 544
PscI	ACATGT	2 cut(s)	435, 570
PspFI	CCCAGC	1 cut(s)	459
PspN4I	GGNNCC	1 cut(s)	455
PspPI	GGNCC	1 cut(s)	485
RsaI	GTAC	1 cut(s)	389
RsaNI	GTAC	1 cut(s)	388
Sau3AI	GATC	2 cut(s)	219, 520
Sau96I	GGNCC	1 cut(s)	485
SchI	GAGTC	4 cut(s)	148, 163, 498, 545
SduI	GDGCHC	1 cut(s)	285
SetI	ASST	9 cut(s)	12, 148, 234, 282, 319, 455, 490, 589, 593
SfaNI	GCATC	2 cut(s)	188, 376
SgrAI	CRCCGGYG	1 cut(s)	372
SinI	GGWCC	1 cut(s)	485
Sse9I	AATT	3 cut(s)	20, 248, 531
SsiI	CCGC	2 cut(s)	253, 457
SspMI	CTAG	4 cut(s)	11, 95, 314, 588
StyI	CCWWGG	2 cut(s)	242, 449
TaaI	ACNGT	1 cut(s)	418
TaqI	TCGA	4 cut(s)	132, 218, 519, 562
TasI	AATT	3 cut(s)	20, 248, 531
TfiI	GAWTC	2 cut(s)	83, 359
TseFI	GTSAC	1 cut(s)	30
Tsp45I	GTSAC	1 cut(s)	30
TspDTI	ATGAA	5 cut(s)	17, 117, 259, 321, 344
VneI	GTGCAC	1 cut(s)	281
VpaK11BI	GGWCC	1 cut(s)	485
XceI	RCATGY	3 cut(s)	330, 439, 574
XcmI	CCANNNNNNNNNTGG	1 cut(s)	456
XspI	CTAG	4 cut(s)	11, 95, 314, 588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.