Pre-mRNA-splicing factor ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26240 |
| fragaria_vesca | FvH4_1g06740 |
| malus_domestica | MD02G1072300.v1.1 MD15G1202100.v1.1 |
| prunus_persica | Prupe.7G215100_v2.0.a1 |
| pyrus_communis | pycom02g05630 pycom15g17950 |
| rosa_chinensis | RchiOBHm_Chr2g0092481 RchiOBHm_Chr7g0226351 |
| rosa_laevigata | RLG00000016317 |
| rosa_multiflora | Rmu_sc0002503.1_g000015 Rmu_sc0002503.1_g000016 Rmu_sc0023787.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00149060 |
| rosa_rugosa | Rorug02G0026900 Rorug02G0027100 |
| rosa_samantha | Rh2AG072800 Rh2BG073400 Rh2DG071400 Rh2DG071500 |
| rosa_wichuraiana | Rw2G006010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 91 |
| AciI | CCGC | 1 cut(s) | 91 |
| AfaI | GTAC | 1 cut(s) | 275 |
| AgsI | TTSAA | 1 cut(s) | 164 |
| AluBI | AGCT | 2 cut(s) | 179, 268 |
| AluI | AGCT | 2 cut(s) | 179, 268 |
| Alw26I | GTCTC | 2 cut(s) | 109, 178 |
| ApeKI | GCWGC | 2 cut(s) | 80, 83 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 178 |
| AsuII | TTCGAA | 1 cut(s) | 142 |
| BbsI | GAAGAC | 1 cut(s) | 258 |
| BbvI | GCAGC | 2 cut(s) | 92, 95 |
| BclI | TGATCA | 1 cut(s) | 33 |
| BcoDI | GTCTC | 2 cut(s) | 109, 178 |
| BisI | GCNGC | 2 cut(s) | 81, 84 |
| BlsI | GCNGC | 2 cut(s) | 82, 85 |
| BpiI | GAAGAC | 1 cut(s) | 258 |
| Bpu14I | TTCGAA | 1 cut(s) | 142 |
| BpuEI | CTTGAG | 1 cut(s) | 133 |
| BsaAI | YACGTR | 1 cut(s) | 273 |
| Bse1I | ACTGG | 2 cut(s) | 150, 225 |
| BseGI | GGATG | 2 cut(s) | 229, 241 |
| BseNI | ACTGG | 2 cut(s) | 150, 225 |
| BseRI | GAGGAG | 1 cut(s) | 146 |
| BseXI | GCAGC | 2 cut(s) | 92, 95 |
| Bsh1236I | CGCG | 1 cut(s) | 91 |
| BslFI | GGGAC | 1 cut(s) | 89 |
| BsmAI | GTCTC | 2 cut(s) | 109, 178 |
| BsmBI | CGTCTC | 1 cut(s) | 109 |
| BsmFI | GGGAC | 1 cut(s) | 89 |
| Bsp119I | TTCGAA | 1 cut(s) | 142 |
| Bsp143I | GATC | 1 cut(s) | 33 |
| BspACI | CCGC | 1 cut(s) | 91 |
| BspFNI | CGCG | 1 cut(s) | 91 |
| BspQI | GCTCTTC | 1 cut(s) | 169 |
| BspT104I | TTCGAA | 1 cut(s) | 142 |
| BsrI | ACTGG | 2 cut(s) | 150, 225 |
| BssMI | GATC | 1 cut(s) | 33 |
| Bst4CI | ACNGT | 1 cut(s) | 29 |
| Bst6I | CTCTTC | 2 cut(s) | 123, 169 |
| BstBAI | YACGTR | 1 cut(s) | 273 |
| BstBI | TTCGAA | 1 cut(s) | 142 |
| BstF5I | GGATG | 2 cut(s) | 229, 241 |
| BstFNI | CGCG | 1 cut(s) | 91 |
| BstKTI | GATC | 1 cut(s) | 36 |
| BstMAI | GTCTC | 2 cut(s) | 109, 178 |
| BstMBI | GATC | 1 cut(s) | 33 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| BstUI | CGCG | 1 cut(s) | 91 |
| BstV1I | GCAGC | 2 cut(s) | 92, 95 |
| BstV2I | GAAGAC | 1 cut(s) | 258 |
| BtsCI | GGATG | 2 cut(s) | 229, 241 |
| BtsIMutI | CAGTG | 1 cut(s) | 157 |
| CseI | GACGC | 1 cut(s) | 86 |
| Csp6I | GTAC | 1 cut(s) | 274 |
| CviJI | RGCY | 4 cut(s) | 86, 137, 179, 268 |
| CviKI_1 | RGCY | 4 cut(s) | 86, 137, 179, 268 |
| CviQI | GTAC | 1 cut(s) | 274 |
| DpnI | GATC | 1 cut(s) | 35 |
| DpnII | GATC | 1 cut(s) | 33 |
| Eam1104I | CTCTTC | 2 cut(s) | 123, 169 |
| EarI | CTCTTC | 2 cut(s) | 123, 169 |
| Esp3I | CGTCTC | 1 cut(s) | 109 |
| FaiI | YATR | 2 cut(s) | 65, 242 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 95, 127, 163, 195 |
| FaqI | GGGAC | 1 cut(s) | 89 |
| FbaI | TGATCA | 1 cut(s) | 33 |
| Fnu4HI | GCNGC | 2 cut(s) | 81, 84 |
| FokI | GGATG | 2 cut(s) | 236, 248 |
| Fsp4HI | GCNGC | 2 cut(s) | 81, 84 |
| GluI | GCNGC | 2 cut(s) | 81, 84 |
| HgaI | GACGC | 1 cut(s) | 86 |
| Hpy188I | TCNGA | 1 cut(s) | 15 |
| Hpy188III | TCNNGA | 1 cut(s) | 183 |
| HpyAV | CCTTC | 1 cut(s) | 158 |
| HpyCH4III | ACNGT | 1 cut(s) | 29 |
| HpyCH4IV | ACGT | 1 cut(s) | 272 |
| HpyCH4V | TGCA | 1 cut(s) | 211 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| HpySE526I | ACGT | 1 cut(s) | 272 |
| Ksp22I | TGATCA | 1 cut(s) | 33 |
| Kzo9I | GATC | 1 cut(s) | 33 |
| LguI | GCTCTTC | 1 cut(s) | 169 |
| LmnI | GCTCC | 1 cut(s) | 55 |
| LpnPI | CCDG | 3 cut(s) | 163, 206, 217 |
| Lsp1109I | GCAGC | 2 cut(s) | 92, 95 |
| MaeII | ACGT | 1 cut(s) | 272 |
| MalI | GATC | 1 cut(s) | 35 |
| MboI | GATC | 1 cut(s) | 33 |
| MboII | GAAGA | 6 cut(s) | 28, 31, 140, 186, 257, 263 |
| MfeI | CAATTG | 1 cut(s) | 50 |
| MluCI | AATT | 1 cut(s) | 50 |
| MnlI | CCTC | 3 cut(s) | 118, 124, 127 |
| MroXI | GAANNNNTTC | 1 cut(s) | 178 |
| MseI | TTAA | 2 cut(s) | 170, 264 |
| MunI | CAATTG | 1 cut(s) | 50 |
| MvnI | CGCG | 1 cut(s) | 91 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| NdeII | GATC | 1 cut(s) | 33 |
| NspV | TTCGAA | 1 cut(s) | 142 |
| PciSI | GCTCTTC | 1 cut(s) | 169 |
| PdmI | GAANNNNTTC | 1 cut(s) | 178 |
| PkrI | GCNGC | 2 cut(s) | 82, 85 |
| Ppu21I | YACGTR | 1 cut(s) | 273 |
| RsaI | GTAC | 1 cut(s) | 275 |
| RsaNI | GTAC | 1 cut(s) | 274 |
| SapI | GCTCTTC | 1 cut(s) | 169 |
| SaqAI | TTAA | 2 cut(s) | 170, 264 |
| SatI | GCNGC | 2 cut(s) | 81, 84 |
| Sau3AI | GATC | 1 cut(s) | 33 |
| SetI | ASST | 4 cut(s) | 169, 181, 270, 275 |
| SfuI | TTCGAA | 1 cut(s) | 142 |
| SgeI | CNNG | 8 cut(s) | 20, 100, 102, 124, 162, 195, 233, 244 |
| SmlI | CTYRAG | 1 cut(s) | 112 |
| SmoI | CTYRAG | 1 cut(s) | 112 |
| Sse9I | AATT | 1 cut(s) | 50 |
| SsiI | CCGC | 1 cut(s) | 91 |
| TaaI | ACNGT | 1 cut(s) | 29 |
| TaiI | ACGT | 1 cut(s) | 275 |
| TaqI | TCGA | 2 cut(s) | 142, 182 |
| TasI | AATT | 1 cut(s) | 50 |
| Tru1I | TTAA | 2 cut(s) | 170, 264 |
| Tru9I | TTAA | 2 cut(s) | 170, 264 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TseI | GCWGC | 2 cut(s) | 80, 83 |
| TspDTI | ATGAA | 2 cut(s) | 240, 264 |
| TspRI | CASTG | 1 cut(s) | 157 |
| XmnI | GAANNNNTTC | 1 cut(s) | 178 |