Regulator of Vps4 activity in the MVB pathway
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32350 AT4G32350 AT4G32350 |
| fragaria_vesca | FvH4_1g04930 FvH4_3g42832 |
| malus_domestica | MD02G1047800.v1.1 MD15G1186300.v1.1 |
| prunus_persica | Prupe.7G230400_v2.0.a1 |
| pyrus_communis | pycom02g04000 pycom15g16700 |
| rosa_chinensis | RchiOBHm_Chr2g0090521 |
| rosa_laevigata | RLG00000016119 |
| rosa_multiflora | Rmu_co8330093.1_g000001 Rmu_sc0004514.1_g000026 |
| rosa_roxburghii | Rroxscaffold_2G00151050 |
| rosa_rugosa | Rorug02G0008800 |
| rosa_samantha | Rh2AG054000 Rh2BG053500 Rh2CG055700 Rh2DG054200 |
| rosa_wichuraiana | Rw2G004780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1691 |
| AccII | CGCG | 1 cut(s) | 360 |
| AciI | CCGC | 3 cut(s) | 33, 1083, 1826 |
| AclWI | GGATC | 7 cut(s) | 80, 592, 1039, 1250, 1263, 1321, 1383 |
| AcoI | YGGCCR | 2 cut(s) | 19, 1084 |
| AcsI | RAATTY | 3 cut(s) | 394, 497, 831 |
| AfaI | GTAC | 1 cut(s) | 718 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1518, 1691 |
| AgsI | TTSAA | 6 cut(s) | 380, 444, 530, 727, 1646, 1838 |
| AjnI | CCWGG | 2 cut(s) | 840, 1309 |
| AluBI | AGCT | 3 cut(s) | 1001, 1430, 1859 |
| AluI | AGCT | 3 cut(s) | 1001, 1430, 1859 |
| Alw21I | GWGCWC | 3 cut(s) | 741, 1306, 1572 |
| Alw26I | GTCTC | 4 cut(s) | 789, 981, 1432, 1526 |
| AlwI | GGATC | 7 cut(s) | 80, 592, 1039, 1250, 1263, 1321, 1383 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1316 |
| Ama87I | CYCGRG | 1 cut(s) | 1821 |
| AoxI | GGCC | 5 cut(s) | 19, 148, 522, 1084, 1543 |
| ApeKI | GCWGC | 8 cut(s) | 13, 326, 329, 1340, 1343, 1805, 1901, 1913 |
| ApoI | RAATTY | 3 cut(s) | 394, 497, 831 |
| AseI | ATTAAT | 1 cut(s) | 159 |
| AspLEI | GCGC | 1 cut(s) | 360 |
| AspS9I | GGNCC | 2 cut(s) | 1793, 1848 |
| AsuHPI | GGTGA | 3 cut(s) | 208, 1340, 1721 |
| AvaI | CYCGRG | 1 cut(s) | 1821 |
| AvaII | GGWCC | 2 cut(s) | 1793, 1848 |
| AxyI | CCTNAGG | 2 cut(s) | 288, 365 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 191, 224, 795, 828 |
| BamHI | GGATCC | 1 cut(s) | 1255 |
| BbsI | GAAGAC | 1 cut(s) | 734 |
| Bbv12I | GWGCWC | 3 cut(s) | 741, 1306, 1572 |
| BbvI | GCAGC | 7 cut(s) | 313, 341, 1327, 1330, 1817, 1888, 1925 |
| BccI | CCATC | 4 cut(s) | 173, 1235, 1642, 1804 |
| BceAI | ACGGC | 1 cut(s) | 6 |
| BciT130I | CCWGG | 2 cut(s) | 842, 1311 |
| BcoDI | GTCTC | 4 cut(s) | 789, 981, 1432, 1526 |
| BfaI | CTAG | 3 cut(s) | 753, 1401, 1431 |
| BfmI | CTRYAG | 4 cut(s) | 327, 633, 669, 1260 |
| Bme1390I | CCNGG | 2 cut(s) | 842, 1311 |
| Bme18I | GGWCC | 2 cut(s) | 1793, 1848 |
| BmeT110I | CYCGRG | 1 cut(s) | 1821 |
| BmgT120I | GGNCC | 2 cut(s) | 1793, 1848 |
| BmiI | GGNNCC | 2 cut(s) | 303, 1257 |
| BmrFI | CCNGG | 2 cut(s) | 842, 1311 |
| BmrI | ACTGGG | 1 cut(s) | 1304 |
| BmuI | ACTGGG | 1 cut(s) | 1304 |
| BpiI | GAAGAC | 1 cut(s) | 734 |
| BpmI | CTGGAG | 1 cut(s) | 422 |
| BpuEI | CTTGAG | 2 cut(s) | 1388, 1429 |
| Bsa29I | ATCGAT | 2 cut(s) | 75, 1602 |
| BsaJI | CCNNGG | 3 cut(s) | 22, 519, 1718 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1518, 1691 |
| Bse1I | ACTGG | 2 cut(s) | 1299, 1705 |
| Bse21I | CCTNAGG | 2 cut(s) | 288, 365 |
| Bse3DI | GCAATG | 3 cut(s) | 1054, 1243, 1506 |
| BseBI | CCWGG | 2 cut(s) | 842, 1311 |
| BseCI | ATCGAT | 2 cut(s) | 75, 1602 |
| BseDI | CCNNGG | 3 cut(s) | 22, 519, 1718 |
| BseGI | GGATG | 9 cut(s) | 543, 739, 901, 1149, 1396, 1534, 1634, 1681, 1870 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1518, 1691 |
| BseMI | GCAATG | 3 cut(s) | 1054, 1243, 1506 |
| BseMII | CTCAG | 2 cut(s) | 279, 947 |
| BseNI | ACTGG | 2 cut(s) | 1299, 1705 |
| BseRI | GAGGAG | 4 cut(s) | 1146, 1314, 1450, 1609 |
| BseX3I | CGGCCG | 1 cut(s) | 19 |
| BseXI | GCAGC | 7 cut(s) | 313, 341, 1327, 1330, 1817, 1888, 1925 |
| BseYI | CCCAGC | 2 cut(s) | 1756, 1855 |
| Bsh1236I | CGCG | 1 cut(s) | 360 |
| Bsh1285I | CGRYCG | 1 cut(s) | 22 |
| BshFI | GGCC | 5 cut(s) | 21, 150, 524, 1086, 1545 |
| BshVI | ATCGAT | 2 cut(s) | 75, 1602 |
| BsiEI | CGRYCG | 1 cut(s) | 22 |
| BsiHKAI | GWGCWC | 3 cut(s) | 741, 1306, 1572 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1821 |
| BsiSI | CCGG | 1 cut(s) | 1473 |
| BslFI | GGGAC | 2 cut(s) | 527, 623 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1518, 1691 |
| BsmAI | GTCTC | 4 cut(s) | 789, 981, 1432, 1526 |
| BsmFI | GGGAC | 2 cut(s) | 527, 623 |
| BsmI | GAATGC | 1 cut(s) | 287 |
| BsnI | GGCC | 5 cut(s) | 21, 150, 524, 1086, 1545 |
| BsoBI | CYCGRG | 1 cut(s) | 1821 |
| Bsp1286I | GDGCHC | 3 cut(s) | 741, 1306, 1572 |
| BspACI | CCGC | 3 cut(s) | 33, 1083, 1826 |
| BspANI | GGCC | 5 cut(s) | 21, 150, 524, 1086, 1545 |
| BspCNI | CTCAG | 2 cut(s) | 280, 946 |
| BspDI | ATCGAT | 2 cut(s) | 75, 1602 |
| BspFNI | CGCG | 1 cut(s) | 360 |
| BspHI | TCATGA | 1 cut(s) | 1360 |
| BspLI | GGNNCC | 2 cut(s) | 303, 1257 |
| BspMAI | CTGCAG | 2 cut(s) | 331, 637 |
| BspPI | GGATC | 7 cut(s) | 80, 592, 1039, 1250, 1263, 1321, 1383 |
| BsrDI | GCAATG | 3 cut(s) | 1054, 1243, 1506 |
| BsrI | ACTGG | 2 cut(s) | 1299, 1705 |
| BssECI | CCNNGG | 3 cut(s) | 22, 519, 1718 |
| BssT1I | CCWWGG | 2 cut(s) | 519, 1718 |
| Bst2UI | CCWGG | 2 cut(s) | 842, 1311 |
| Bst4CI | ACNGT | 7 cut(s) | 704, 716, 721, 808, 1554, 1574, 1625 |
| Bst6I | CTCTTC | 2 cut(s) | 86, 1584 |
| BstC8I | GCNNGC | 2 cut(s) | 1338, 1547 |
| BstDEI | CTNAG | 6 cut(s) | 288, 365, 436, 933, 1251, 1919 |
| BstDSI | CCRYGG | 1 cut(s) | 22 |
| BstF5I | GGATG | 9 cut(s) | 543, 739, 901, 1149, 1396, 1534, 1634, 1681, 1870 |
| BstFNI | CGCG | 1 cut(s) | 360 |
| BstHHI | GCGC | 1 cut(s) | 360 |
| BstMAI | GTCTC | 4 cut(s) | 789, 981, 1432, 1526 |
| BstMCI | CGRYCG | 1 cut(s) | 22 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1106, 1242, 1496, 1757, 1910 |
| BstNI | CCWGG | 2 cut(s) | 842, 1311 |
| BstNSI | RCATGY | 2 cut(s) | 1040, 1868 |
| BstSCI | CCNGG | 2 cut(s) | 840, 1309 |
| BstSFI | CTRYAG | 4 cut(s) | 327, 633, 669, 1260 |
| BstUI | CGCG | 1 cut(s) | 360 |
| BstV1I | GCAGC | 7 cut(s) | 313, 341, 1327, 1330, 1817, 1888, 1925 |
| BstV2I | GAAGAC | 1 cut(s) | 734 |
| BstX2I | RGATCY | 3 cut(s) | 584, 1255, 1313 |
| BstYI | RGATCY | 3 cut(s) | 584, 1255, 1313 |
| BstZI | CGGCCG | 1 cut(s) | 19 |
| Bsu15I | ATCGAT | 2 cut(s) | 75, 1602 |
| Bsu36I | CCTNAGG | 2 cut(s) | 288, 365 |
| BsuRI | GGCC | 5 cut(s) | 21, 150, 524, 1086, 1545 |
| BsuTUI | ATCGAT | 2 cut(s) | 75, 1602 |
| BtgI | CCRYGG | 1 cut(s) | 22 |
| BtgZI | GCGATG | 1 cut(s) | 244 |
| BtsCI | GGATG | 9 cut(s) | 543, 739, 901, 1149, 1396, 1534, 1634, 1681, 1870 |
| BtsIMutI | CAGTG | 3 cut(s) | 314, 709, 1698 |
| Cac8I | GCNNGC | 2 cut(s) | 1338, 1547 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1316 |
| CciI | TCATGA | 1 cut(s) | 1360 |
| CfoI | GCGC | 1 cut(s) | 360 |
| Cfr13I | GGNCC | 2 cut(s) | 1793, 1848 |
| ClaI | ATCGAT | 2 cut(s) | 75, 1602 |
| Csp6I | GTAC | 1 cut(s) | 717 |
| CviQI | GTAC | 1 cut(s) | 717 |
| DdeI | CTNAG | 6 cut(s) | 288, 365, 436, 933, 1251, 1919 |
| EaeI | YGGCCR | 2 cut(s) | 19, 1084 |
| EagI | CGGCCG | 1 cut(s) | 19 |
| Eam1104I | CTCTTC | 2 cut(s) | 86, 1584 |
| EarI | CTCTTC | 2 cut(s) | 86, 1584 |
| EclXI | CGGCCG | 1 cut(s) | 19 |
| Eco130I | CCWWGG | 2 cut(s) | 519, 1718 |
| Eco147I | AGGCCT | 2 cut(s) | 524, 1545 |
| Eco32I | GATATC | 1 cut(s) | 127 |
| Eco47I | GGWCC | 2 cut(s) | 1793, 1848 |
| Eco52I | CGGCCG | 1 cut(s) | 19 |
| Eco81I | CCTNAGG | 2 cut(s) | 288, 365 |
| Eco88I | CYCGRG | 1 cut(s) | 1821 |
| EcoRI | GAATTC | 2 cut(s) | 394, 497 |
| EcoRII | CCWGG | 2 cut(s) | 840, 1309 |
| EcoRV | GATATC | 1 cut(s) | 127 |
| EcoT14I | CCWWGG | 2 cut(s) | 519, 1718 |
| EcoT22I | ATGCAT | 1 cut(s) | 1399 |
| ErhI | CCWWGG | 2 cut(s) | 519, 1718 |
| FaqI | GGGAC | 2 cut(s) | 527, 623 |
| FokI | GGATG | 9 cut(s) | 550, 746, 908, 1136, 1403, 1541, 1621, 1668, 1857 |
| FspBI | CTAG | 3 cut(s) | 753, 1401, 1431 |
| GlaI | GCGC | 1 cut(s) | 359 |
| GsaI | CCCAGC | 2 cut(s) | 1760, 1859 |
| GsuI | CTGGAG | 1 cut(s) | 422 |
| HaeIII | GGCC | 5 cut(s) | 21, 150, 524, 1086, 1545 |
| HapII | CCGG | 1 cut(s) | 1473 |
| HhaI | GCGC | 1 cut(s) | 360 |
| Hin6I | GCGC | 1 cut(s) | 358 |
| HinP1I | GCGC | 1 cut(s) | 358 |
| HindIII | AAGCTT | 1 cut(s) | 999 |
| HinfI | GANTC | 9 cut(s) | 183, 250, 415, 515, 762, 1599, 1615, 1712, 1739 |
| HpaII | CCGG | 1 cut(s) | 1473 |
| HphI | GGTGA | 3 cut(s) | 208, 1340, 1721 |
| Hpy188I | TCNGA | 6 cut(s) | 72, 343, 750, 1318, 1744, 1801 |
| Hpy99I | CGWCG | 1 cut(s) | 211 |
| HpyAV | CCTTC | 6 cut(s) | 165, 460, 1366, 1518, 1784, 1920 |
| HpyCH4III | ACNGT | 7 cut(s) | 704, 716, 721, 808, 1554, 1574, 1625 |
| HpyCH4IV | ACGT | 1 cut(s) | 1453 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1106, 1242, 1496, 1757, 1910 |
| HpyF3I | CTNAG | 6 cut(s) | 288, 365, 436, 933, 1251, 1919 |
| HpySE526I | ACGT | 1 cut(s) | 1453 |
| HspAI | GCGC | 1 cut(s) | 358 |
| LmnI | GCTCC | 3 cut(s) | 226, 904, 1301 |
| Lsp1109I | GCAGC | 7 cut(s) | 313, 341, 1327, 1330, 1817, 1888, 1925 |
| MaeI | CTAG | 3 cut(s) | 753, 1401, 1431 |
| MaeII | ACGT | 1 cut(s) | 1453 |
| MaeIII | GTNAC | 1 cut(s) | 704 |
| MflI | RGATCY | 3 cut(s) | 584, 1255, 1313 |
| MhlI | GDGCHC | 3 cut(s) | 741, 1306, 1572 |
| MlyI | GAGTC | 4 cut(s) | 177, 509, 756, 1748 |
| MmeI | TCCRAC | 3 cut(s) | 748, 895, 1875 |
| Mph1103I | ATGCAT | 1 cut(s) | 1399 |
| MseI | TTAA | 4 cut(s) | 54, 159, 476, 1353 |
| MslI | CAYNNNNRTG | 4 cut(s) | 870, 1095, 1389, 1467 |
| MspI | CCGG | 1 cut(s) | 1473 |
| MspR9I | CCNGG | 2 cut(s) | 842, 1311 |
| Mva1269I | GAATGC | 1 cut(s) | 287 |
| MvaI | CCWGG | 2 cut(s) | 842, 1311 |
| MvnI | CGCG | 1 cut(s) | 360 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1106, 1242, 1496, 1757, 1910 |
| NlaIV | GGNNCC | 2 cut(s) | 303, 1257 |
| NmeAIII | GCCGAG | 1 cut(s) | 1840 |
| NmuCI | GTSAC | 1 cut(s) | 704 |
| NsiI | ATGCAT | 1 cut(s) | 1399 |
| NspI | RCATGY | 2 cut(s) | 1040, 1868 |
| PagI | TCATGA | 1 cut(s) | 1360 |
| PceI | AGGCCT | 2 cut(s) | 524, 1545 |
| PctI | GAATGC | 1 cut(s) | 287 |
| PfeI | GAWTC | 5 cut(s) | 250, 415, 1599, 1615, 1712 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1691 |
| PfoI | TCCNGGA | 1 cut(s) | 840 |
| PleI | GAGTC | 4 cut(s) | 177, 509, 756, 1747 |
| PpsI | GAGTC | 4 cut(s) | 177, 509, 756, 1747 |
| PshBI | ATTAAT | 1 cut(s) | 159 |
| Psp6I | CCWGG | 2 cut(s) | 840, 1309 |
| PspFI | CCCAGC | 2 cut(s) | 1756, 1855 |
| PspGI | CCWGG | 2 cut(s) | 840, 1309 |
| PspN4I | GGNNCC | 2 cut(s) | 303, 1257 |
| PspPI | GGNCC | 2 cut(s) | 1793, 1848 |
| PstI | CTGCAG | 2 cut(s) | 331, 637 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1316 |
| PsuI | RGATCY | 3 cut(s) | 584, 1255, 1313 |
| RsaI | GTAC | 1 cut(s) | 718 |
| RsaNI | GTAC | 1 cut(s) | 717 |
| RseI | CAYNNNNRTG | 4 cut(s) | 870, 1095, 1389, 1467 |
| SaqAI | TTAA | 4 cut(s) | 54, 159, 476, 1353 |
| Sau96I | GGNCC | 2 cut(s) | 1793, 1848 |
| SchI | GAGTC | 4 cut(s) | 177, 509, 756, 1748 |
| ScrFI | CCNGG | 2 cut(s) | 842, 1311 |
| SduI | GDGCHC | 3 cut(s) | 741, 1306, 1572 |
| SfcI | CTRYAG | 4 cut(s) | 327, 633, 669, 1260 |
| SinI | GGWCC | 2 cut(s) | 1793, 1848 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 870, 1095, 1389, 1467 |
| SmlI | CTYRAG | 2 cut(s) | 1367, 1444 |
| SmoI | CTYRAG | 2 cut(s) | 1367, 1444 |
| SseBI | AGGCCT | 2 cut(s) | 524, 1545 |
| SsiI | CCGC | 3 cut(s) | 33, 1083, 1826 |
| SspMI | CTAG | 3 cut(s) | 753, 1401, 1431 |
| StuI | AGGCCT | 2 cut(s) | 524, 1545 |
| StyD4I | CCNGG | 2 cut(s) | 840, 1309 |
| StyI | CCWWGG | 2 cut(s) | 519, 1718 |
| TaaI | ACNGT | 7 cut(s) | 704, 716, 721, 808, 1554, 1574, 1625 |
| TaiI | ACGT | 1 cut(s) | 1456 |
| TaqI | TCGA | 2 cut(s) | 75, 1602 |
| TauI | GCSGC | 2 cut(s) | 35, 1086 |
| TfiI | GAWTC | 5 cut(s) | 250, 415, 1599, 1615, 1712 |
| Tru1I | TTAA | 4 cut(s) | 54, 159, 476, 1353 |
| Tru9I | TTAA | 4 cut(s) | 54, 159, 476, 1353 |
| TscAI | CASTG | 3 cut(s) | 321, 709, 1705 |
| TseFI | GTSAC | 1 cut(s) | 704 |
| TseI | GCWGC | 8 cut(s) | 13, 326, 329, 1340, 1343, 1805, 1901, 1913 |
| Tsp45I | GTSAC | 1 cut(s) | 704 |
| TspDTI | ATGAA | 9 cut(s) | 494, 888, 918, 1011, 1181, 1517, 1599, 1607, 1620 |
| TspGWI | ACGGA | 3 cut(s) | 100, 597, 746 |
| TspRI | CASTG | 3 cut(s) | 321, 709, 1705 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1691 |
| VpaK11BI | GGWCC | 2 cut(s) | 1793, 1848 |
| VspI | ATTAAT | 1 cut(s) | 159 |
| XapI | RAATTY | 3 cut(s) | 394, 497, 831 |
| XceI | RCATGY | 2 cut(s) | 1040, 1868 |
| XspI | CTAG | 3 cut(s) | 753, 1401, 1431 |
| Zsp2I | ATGCAT | 1 cut(s) | 1399 |