Rmu_sc0004514.1_g000026

Regulator of Vps4 activity in the MVB pathway

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004514.1
OG0009820
Physical Location & Seq
Forward (+)
113037 .. 116271
3235 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004514.1_g000026.1.cds

Sequence Viewer

Length: 1863 bp
atgctcgacggactgctcggccgtggattcggcgccaagtgtaaatcgctgataaaattgacgaaaactcggatcgatgtgattcggaggaagaggaacgcgacgcagaagtttttgaagaaagatatagctgatctactcaaccatggcctcgaaattaatgctttcggaagggctgagggacttacagtggaggtgatactttcggcgtgttacgattttgttgagcgatgctgtgatttggtgttgaagcatctttcagtcatgcagaaacaaagtgaatgccctgaggactgtaaggaagctgttgcatcactgatggttgctgcggcaagattttctgatttaccagagttgcgtgacattaggcaactatttcaagagagatacgcgaattctctggattactgtgcggatcaaaagtttgttgagaacatagcttcaaagcctcccacattggaaaagaaggttcaattgatgaaagacatagcattagagtattcaataaagtgggactccaaggcctttgaacaaatgatgtctaaacctcctgcttttatacaggacaagccaaaaacttatgggtctttccctgttactgacgataaaggcaaattgtctaatgggaatggtgcagtactaaaaggagataggcatgaccatctgtcaacagaaaggagacttgatcctaatggtggccacaaattacagaacaacaaggaggttatagccttgaagaaggatgagctcgatgatcagactaggcatagacctttaggaaaagaatacaagtctctcaaaggccgggaaggtagtctcaaggaaaaagagggccatggcatcttgttccaggaaaggcaagaagttgctcacaggtatgaagcaagagaggatgctccttcaaaaccagttagattaggcagttcttctcggggaaaaggagcagaaaggcattatgaagcagagaatagtgttcgtaaaagagacgaccctgacactattcctcatgtaaagccaaatgttgctggaccacctgtgaaaagtgatggtaaagattcttttgctggtaaagaagaaggaacacctaaattgaagcccttctccaactatggccttcctcctccttatgtgaaatctaatgtcagagcaaaagatagaaaacatgaaactaatttcggtcatgattattctcaaggtaccggcatctctatggatcctgcagcatataagagagccttcgctgataatgtgttggaaagggtacaactaggtcgtgatcatgagaggcgtgctactgcgaaagttgatagttatgatcatgagaaggagctcgttcatcaggatgatatagctaccaacagtgtaccaaaaccaagatcatctagaaggagaccctcaagatcgcgctcctctaccaatgatgctggcaacggtgaagatataggagctgcaacgagcaaaccaagaagccggagtaggagaagggatgagtcaagacgtggcctgcaactgttgtttgatgatgaccgccaccacaggaaagatgatgaagagagaagaattgacgaactgctgcttcattacagcacaaagccatctaacttggagccagggcagtcaagaagaaagtcaaaaagtcgtcatgcaagcagagataagcctgctggggaggagtctgaaccaactcatgtaagatcaacttcccttcctcatgaacattcaggtccatcagagacgccgaaagtatttgctcgtgcggcttccttccaaccagatgggtccaacccagctcggcacgtgcatcccaagttacccgactatgaggatttggctgccaagtttgcagccttaagaggaaggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Ist1

Protein Analysis

620

Amino Acids

69.93

Weight (kDa)

9.37

Isoelectric Point (pI)

47.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009820)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32350 AT4G32350 AT4G32350
fragaria_vesca FvH4_1g04930 FvH4_3g42832
malus_domestica MD02G1047800.v1.1 MD15G1186300.v1.1
prunus_persica Prupe.7G230400_v2.0.a1
pyrus_communis pycom02g04000 pycom15g16700
rosa_chinensis RchiOBHm_Chr2g0090521
rosa_laevigata RLG00000016119
rosa_multiflora Rmu_co8330093.1_g000001 Rmu_sc0004514.1_g000026
rosa_roxburghii Rroxscaffold_2G00151050
rosa_rugosa Rorug02G0008800
rosa_samantha Rh2AG054000 Rh2BG053500 Rh2CG055700 Rh2DG054200
rosa_wichuraiana Rw2G004780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1196
AccB1I GGYRCC 2 cut(s) 32, 1196
AccII CGCG 3 cut(s) 101, 392, 1405
AciI CCGC 4 cut(s) 329, 413, 1528, 1757
AclWI GGATC 5 cut(s) 80, 423, 680, 1208, 1221
AcoI YGGCCR 2 cut(s) 19, 697
AcsI RAATTY 1 cut(s) 394
AcvI CACGTG 1 cut(s) 1798
AcyI GRCGYC 2 cut(s) 33, 1736
AfaI GTAC 4 cut(s) 639, 1198, 1263, 1365
AfiI CCNNNNNNNGG 1 cut(s) 695
AflII CTTAAG 1 cut(s) 1849
AhdI GACNNNNNGTC 1 cut(s) 664
AjiI CACGTC 1 cut(s) 1499
AjnI CCWGG 2 cut(s) 849, 1609
AluBI AGCT 8 cut(s) 131, 305, 440, 748, 1330, 1352, 1448, 1790
AluI AGCT 8 cut(s) 131, 305, 440, 748, 1330, 1352, 1448, 1790
Alw21I GWGCWC 2 cut(s) 750, 1332
Alw26I GTCTC 6 cut(s) 673, 798, 821, 978, 1384, 1727
AlwI GGATC 5 cut(s) 80, 423, 680, 1208, 1221
Ama87I CYCGRG 1 cut(s) 930
AoxI GGCC 8 cut(s) 19, 148, 522, 697, 802, 832, 1111, 1501
ApeKI GCWGC 6 cut(s) 326, 1220, 1448, 1573, 1832, 1844
ApoI RAATTY 1 cut(s) 394
AseI ATTAAT 1 cut(s) 159
Asp700I GAANNNNTTC 1 cut(s) 1097
Asp718I GGTACC 1 cut(s) 1196
AspLEI GCGC 2 cut(s) 35, 1407
AspS9I GGNCC 4 cut(s) 832, 1028, 1724, 1779
AsuC2I CCSGG 1 cut(s) 806
AsuHPI GGTGA 2 cut(s) 208, 1445
AvaI CYCGRG 1 cut(s) 930
AvaII GGWCC 3 cut(s) 1028, 1724, 1779
AxyI CCTNAGG 1 cut(s) 288
BalI TGGCCA 1 cut(s) 699
BamHI GGATCC 1 cut(s) 1213
BanI GGYRCC 2 cut(s) 32, 1196
BanII GRGCYC 2 cut(s) 750, 1332
BauI CACGAG 1 cut(s) 1752
BbrPI CACGTG 1 cut(s) 1798
Bbv12I GWGCWC 2 cut(s) 750, 1332
BbvCI CCTCAGC 1 cut(s) 177
BbvI GCAGC 6 cut(s) 313, 1232, 1435, 1560, 1819, 1856
BccI CCATC 6 cut(s) 313, 669, 1040, 1603, 1735, 1769
BceAI ACGGC 1 cut(s) 6
BcgI CGANNNNNNTGC 2 cut(s) 143, 177
BciT130I CCWGG 2 cut(s) 851, 1611
BclI TGATCA 3 cut(s) 754, 1276, 1315
BcnI CCSGG 1 cut(s) 806
BcoDI GTCTC 6 cut(s) 673, 798, 821, 978, 1384, 1727
BfaI CTAG 3 cut(s) 762, 1268, 1383
BfmI CTRYAG 1 cut(s) 1218
BfoI RGCGCY 1 cut(s) 36
BfrI CTTAAG 1 cut(s) 1849
BisI GCNGC 8 cut(s) 327, 330, 1221, 1449, 1574, 1758, 1833, 1845
BlsI GCNGC 8 cut(s) 328, 331, 1222, 1450, 1575, 1759, 1834, 1846
BmcAI AGTACT 1 cut(s) 639
Bme1390I CCNGG 3 cut(s) 806, 851, 1611
Bme18I GGWCC 3 cut(s) 1028, 1724, 1779
BmeRI GACNNNNNGTC 1 cut(s) 664
BmeT110I CYCGRG 1 cut(s) 930
BmgBI CACGTC 1 cut(s) 1499
BmgT120I GGNCC 4 cut(s) 832, 1028, 1724, 1779
BmiI GGNNCC 5 cut(s) 34, 1198, 1215, 1608, 1780
BmrFI CCNGG 3 cut(s) 806, 851, 1611
BmsI GCATC 8 cut(s) 221, 262, 320, 849, 883, 1212, 1411, 1810
Bpu10I CCTNAGC 1 cut(s) 177
BpuEI CTTGAG 3 cut(s) 803, 1176, 1381
BpuMI CCSGG 1 cut(s) 806
Bsa29I ATCGAT 1 cut(s) 75
BsaAI YACGTR 1 cut(s) 1798
BsaHI GRCGYC 2 cut(s) 33, 1736
BsaI GGTCTC 1 cut(s) 1384
BsaJI CCNNGG 5 cut(s) 22, 145, 519, 835, 1610
Bsc4I CCNNNNNNNGG 1 cut(s) 695
Bse118I RCCGGY 1 cut(s) 1199
Bse1I ACTGG 1 cut(s) 908
Bse21I CCTNAGG 1 cut(s) 288
BseBI CCWGG 2 cut(s) 851, 1611
BseCI ATCGAT 1 cut(s) 75
BseDI CCNNGG 5 cut(s) 22, 145, 519, 835, 1610
BseGI GGATG 5 cut(s) 748, 898, 1348, 1492, 1801
BseLI CCNNNNNNNGG 1 cut(s) 695
BseMII CTCAG 2 cut(s) 168, 279
BseNI ACTGG 1 cut(s) 908
BseRI GAGGAG 3 cut(s) 1110, 1399, 1685
BseX3I CGGCCG 1 cut(s) 19
BseXI GCAGC 6 cut(s) 313, 1232, 1435, 1560, 1819, 1856
BseYI CCCAGC 2 cut(s) 1664, 1786
BsgI GTGCAG 1 cut(s) 654
Bsh1236I CGCG 3 cut(s) 101, 392, 1405
Bsh1285I CGRYCG 1 cut(s) 22
BshFI GGCC 8 cut(s) 21, 150, 524, 699, 804, 834, 1113, 1503
BshNI GGYRCC 2 cut(s) 32, 1196
BshVI ATCGAT 1 cut(s) 75
BsiEI CGRYCG 1 cut(s) 22
BsiHKAI GWGCWC 2 cut(s) 750, 1332
BsiHKCI CYCGRG 1 cut(s) 930
BsiSI CCGG 3 cut(s) 805, 1200, 1471
BslFI GGGAC 2 cut(s) 195, 527
BslI CCNNNNNNNGG 1 cut(s) 695
BsmAI GTCTC 6 cut(s) 673, 798, 821, 978, 1384, 1727
BsmBI CGTCTC 2 cut(s) 978, 1727
BsmFI GGGAC 2 cut(s) 195, 527
BsmI GAATGC 1 cut(s) 287
BsnI GGCC 8 cut(s) 21, 150, 524, 699, 804, 834, 1113, 1503
Bso31I GGTCTC 1 cut(s) 1384
BsoBI CYCGRG 1 cut(s) 930
Bsp1286I GDGCHC 2 cut(s) 750, 1332
Bsp19I CCATGG 2 cut(s) 145, 835
BspACI CCGC 4 cut(s) 329, 413, 1528, 1757
BspANI GGCC 8 cut(s) 21, 150, 524, 699, 804, 834, 1113, 1503
BspCNI CTCAG 2 cut(s) 169, 280
BspDI ATCGAT 1 cut(s) 75
BspFNI CGCG 3 cut(s) 101, 392, 1405
BspHI TCATGA 4 cut(s) 1180, 1279, 1318, 1711
BspLI GGNNCC 5 cut(s) 34, 1198, 1215, 1608, 1780
BspMAI CTGCAG 1 cut(s) 1222
BspPI GGATC 5 cut(s) 80, 423, 680, 1208, 1221
BspT107I GGYRCC 2 cut(s) 32, 1196
BspTI CTTAAG 1 cut(s) 1849
BspTNI GGTCTC 1 cut(s) 1384
BsrFI RCCGGY 1 cut(s) 1199
BsrI ACTGG 1 cut(s) 908
BssAI RCCGGY 1 cut(s) 1199
BssECI CCNNGG 5 cut(s) 22, 145, 519, 835, 1610
BssNI GRCGYC 2 cut(s) 33, 1736
BssSI CACGAG 1 cut(s) 1752
BssT1I CCWWGG 3 cut(s) 145, 519, 835
Bst2BI CACGAG 1 cut(s) 1752
Bst2UI CCWGG 2 cut(s) 851, 1611
Bst4CI ACNGT 6 cut(s) 190, 296, 410, 1361, 1433, 1512
Bst6I CTCTTC 2 cut(s) 86, 1545
BstACI GRCGYC 2 cut(s) 33, 1736
BstAFI CTTAAG 1 cut(s) 1849
BstBAI YACGTR 1 cut(s) 1798
BstC8I GCNNGC 5 cut(s) 1290, 1426, 1505, 1648, 1662
BstDEI CTNAG 2 cut(s) 177, 288
BstDSI CCRYGG 3 cut(s) 22, 145, 835
BstF5I GGATG 5 cut(s) 748, 898, 1348, 1492, 1801
BstFNI CGCG 3 cut(s) 101, 392, 1405
BstH2I RGCGCY 1 cut(s) 36
BstHHI GCGC 2 cut(s) 35, 1407
BstMAI GTCTC 6 cut(s) 673, 798, 821, 978, 1384, 1727
BstMCI CGRYCG 1 cut(s) 22
BstMWI GCNNNNNNNGC 2 cut(s) 1757, 1841
BstNI CCWGG 2 cut(s) 851, 1611
BstSCI CCNGG 3 cut(s) 804, 849, 1609
BstSFI CTRYAG 1 cut(s) 1218
BstUI CGCG 3 cut(s) 101, 392, 1405
BstV1I GCAGC 6 cut(s) 313, 1232, 1435, 1560, 1819, 1856
BstX2I RGATCY 1 cut(s) 1213
BstXI CCANNNNNNTGG 1 cut(s) 1775
BstYI RGATCY 1 cut(s) 1213
BstZI CGGCCG 1 cut(s) 19
Bsu15I ATCGAT 1 cut(s) 75
Bsu36I CCTNAGG 1 cut(s) 288
BsuRI GGCC 8 cut(s) 21, 150, 524, 699, 804, 834, 1113, 1503
BsuTUI ATCGAT 1 cut(s) 75
BtgI CCRYGG 3 cut(s) 22, 145, 835
BtgZI GCGATG 1 cut(s) 244
BtrI CACGTC 1 cut(s) 1499
BtsCI GGATG 5 cut(s) 748, 898, 1348, 1492, 1801
BtsIMutI CAGTG 3 cut(s) 195, 314, 1366
Cac8I GCNNGC 5 cut(s) 1290, 1426, 1505, 1648, 1662
CciI TCATGA 4 cut(s) 1180, 1279, 1318, 1711
CfoI GCGC 2 cut(s) 35, 1407
Cfr10I RCCGGY 1 cut(s) 1199
Cfr13I GGNCC 4 cut(s) 832, 1028, 1724, 1779
ClaI ATCGAT 1 cut(s) 75
CseI GACGC 2 cut(s) 112, 1744
Csp6I GTAC 4 cut(s) 638, 1197, 1262, 1364
CviQI GTAC 4 cut(s) 638, 1197, 1262, 1364
DdeI CTNAG 2 cut(s) 177, 288
DinI GGCGCC 1 cut(s) 34
DriI GACNNNNNGTC 1 cut(s) 664
EaeI YGGCCR 2 cut(s) 19, 697
EagI CGGCCG 1 cut(s) 19
Eam1104I CTCTTC 2 cut(s) 86, 1545
Eam1105I GACNNNNNGTC 1 cut(s) 664
EarI CTCTTC 2 cut(s) 86, 1545
Ecl136II GAGCTC 2 cut(s) 748, 1330
EclXI CGGCCG 1 cut(s) 19
Eco130I CCWWGG 3 cut(s) 145, 519, 835
Eco147I AGGCCT 1 cut(s) 524
Eco24I GRGCYC 2 cut(s) 750, 1332
Eco31I GGTCTC 1 cut(s) 1384
Eco47I GGWCC 3 cut(s) 1028, 1724, 1779
Eco52I CGGCCG 1 cut(s) 19
Eco53kI GAGCTC 2 cut(s) 748, 1330
Eco72I CACGTG 1 cut(s) 1798
Eco81I CCTNAGG 1 cut(s) 288
Eco88I CYCGRG 1 cut(s) 930
EcoICRI GAGCTC 2 cut(s) 748, 1330
EcoRI GAATTC 1 cut(s) 394
EcoRII CCWGG 2 cut(s) 849, 1609
EcoT14I CCWWGG 3 cut(s) 145, 519, 835
EcoT38I GRGCYC 2 cut(s) 750, 1332
EgeI GGCGCC 1 cut(s) 34
EheI GGCGCC 1 cut(s) 34
ErhI CCWWGG 3 cut(s) 145, 519, 835
Esp3I CGTCTC 2 cut(s) 978, 1727
FalI AAGNNNNNCTT 4 cut(s) 1220, 1252, 1684, 1716
FaqI GGGAC 2 cut(s) 195, 527
FbaI TGATCA 3 cut(s) 754, 1276, 1315
Fnu4HI GCNGC 8 cut(s) 327, 330, 1221, 1449, 1574, 1758, 1833, 1845
FokI GGATG 5 cut(s) 755, 905, 1355, 1499, 1788
FriOI GRGCYC 2 cut(s) 750, 1332
Fsp4HI GCNGC 8 cut(s) 327, 330, 1221, 1449, 1574, 1758, 1833, 1845
FspBI CTAG 3 cut(s) 762, 1268, 1383
GlaI GCGC 2 cut(s) 34, 1406
GluI GCNGC 8 cut(s) 327, 330, 1221, 1449, 1574, 1758, 1833, 1845
GsaI CCCAGC 2 cut(s) 1668, 1790
HaeII RGCGCY 1 cut(s) 36
HaeIII GGCC 8 cut(s) 21, 150, 524, 699, 804, 834, 1113, 1503
HapII CCGG 3 cut(s) 805, 1200, 1471
HgaI GACGC 2 cut(s) 112, 1744
HhaI GCGC 2 cut(s) 35, 1407
Hin1I GRCGYC 2 cut(s) 33, 1736
Hin6I GCGC 2 cut(s) 33, 1405
HinP1I GCGC 2 cut(s) 33, 1405
HincII GTYRAC 1 cut(s) 669
HindII GTYRAC 1 cut(s) 669
HinfI GANTC 6 cut(s) 27, 82, 515, 1055, 1490, 1673
HpaII CCGG 3 cut(s) 805, 1200, 1471
HphI GGTGA 2 cut(s) 208, 1445
Hpy166II GTNNAC 2 cut(s) 669, 1364
Hpy188I TCNGA 8 cut(s) 72, 87, 170, 343, 759, 1145, 1678, 1732
Hpy8I GTNNAC 2 cut(s) 669, 1364
Hpy99I CGWCG 2 cut(s) 11, 106
HpyCH4III ACNGT 6 cut(s) 190, 296, 410, 1361, 1433, 1512
HpyCH4IV ACGT 2 cut(s) 1498, 1797
HpyCH4V TGCA 9 cut(s) 268, 311, 635, 1220, 1451, 1507, 1646, 1801, 1844
HpyF10VI GCNNNNNNNGC 2 cut(s) 1757, 1841
HpyF3I CTNAG 2 cut(s) 177, 288
HpySE526I ACGT 2 cut(s) 1498, 1797
Hsp92I GRCGYC 2 cut(s) 33, 1736
HspAI GCGC 2 cut(s) 33, 1405
KasI GGCGCC 1 cut(s) 32
KpnI GGTACC 1 cut(s) 1200
Ksp22I TGATCA 3 cut(s) 754, 1276, 1315
LmnI GCTCC 6 cut(s) 901, 941, 1327, 1412, 1445, 1606
Lsp1109I GCAGC 6 cut(s) 313, 1232, 1435, 1560, 1819, 1856
LweI GCATC 8 cut(s) 221, 262, 320, 849, 883, 1212, 1411, 1810
MaeI CTAG 3 cut(s) 762, 1268, 1383
MaeII ACGT 2 cut(s) 1498, 1797
MaeIII GTNAC 4 cut(s) 212, 359, 595, 1809
MboII GAAGA 9 cut(s) 103, 130, 748, 918, 1085, 1448, 1562, 1569, 1635
MfeI CAATTG 1 cut(s) 473
MflI RGATCY 1 cut(s) 1213
MhlI GDGCHC 2 cut(s) 750, 1332
MlsI TGGCCA 1 cut(s) 699
MluCI AATT 9 cut(s) 56, 156, 394, 473, 614, 704, 1088, 1171, 1560
MluNI TGGCCA 1 cut(s) 699
Mly113I GGCGCC 1 cut(s) 33
MlyI GAGTC 3 cut(s) 509, 1499, 1682
MmeI TCCRAC 4 cut(s) 1128, 1233, 1792, 1806
Mox20I TGGCCA 1 cut(s) 699
MroXI GAANNNNTTC 1 cut(s) 1097
MscI TGGCCA 1 cut(s) 699
MseI TTAA 2 cut(s) 159, 1850
MslI CAYNNNNRTG 3 cut(s) 876, 1208, 1341
Msp20I TGGCCA 1 cut(s) 699
MspCI CTTAAG 1 cut(s) 1849
MspI CCGG 3 cut(s) 805, 1200, 1471
MspR9I CCNGG 3 cut(s) 806, 851, 1611
MunI CAATTG 1 cut(s) 473
Mva1269I GAATGC 1 cut(s) 287
MvaI CCWGG 2 cut(s) 851, 1611
MvnI CGCG 3 cut(s) 101, 392, 1405
MwoI GCNNNNNNNGC 2 cut(s) 1757, 1841
NarI GGCGCC 1 cut(s) 33
NciI CCSGG 1 cut(s) 806
NcoI CCATGG 2 cut(s) 145, 835
NlaIV GGNNCC 5 cut(s) 34, 1198, 1215, 1608, 1780
NmeAIII GCCGAG 1 cut(s) 1771
NmuCI GTSAC 1 cut(s) 359
PagI TCATGA 4 cut(s) 1180, 1279, 1318, 1711
PceI AGGCCT 1 cut(s) 524
PctI GAATGC 1 cut(s) 287
PdmI GAANNNNTTC 1 cut(s) 1097
PfeI GAWTC 3 cut(s) 27, 82, 1055
PfoI TCCNGGA 1 cut(s) 849
PkrI GCNGC 8 cut(s) 328, 331, 1222, 1450, 1575, 1759, 1834, 1846
PleI GAGTC 3 cut(s) 509, 1498, 1681
PluTI GGCGCC 1 cut(s) 36
PmaCI CACGTG 1 cut(s) 1798
PmlI CACGTG 1 cut(s) 1798
PpsI GAGTC 3 cut(s) 509, 1498, 1681
Ppu21I YACGTR 1 cut(s) 1798
PshBI ATTAAT 1 cut(s) 159
Psp124BI GAGCTC 2 cut(s) 750, 1332
Psp6I CCWGG 2 cut(s) 849, 1609
PspCI CACGTG 1 cut(s) 1798
PspFI CCCAGC 2 cut(s) 1664, 1786
PspGI CCWGG 2 cut(s) 849, 1609
PspN4I GGNNCC 5 cut(s) 34, 1198, 1215, 1608, 1780
PspPI GGNCC 4 cut(s) 832, 1028, 1724, 1779
PstI CTGCAG 1 cut(s) 1222
PsuI RGATCY 1 cut(s) 1213
RsaI GTAC 4 cut(s) 639, 1198, 1263, 1365
RsaNI GTAC 4 cut(s) 638, 1197, 1262, 1364
RseI CAYNNNNRTG 3 cut(s) 876, 1208, 1341
SacI GAGCTC 2 cut(s) 750, 1332
SaqAI TTAA 2 cut(s) 159, 1850
SatI GCNGC 8 cut(s) 327, 330, 1221, 1449, 1574, 1758, 1833, 1845
Sau96I GGNCC 4 cut(s) 832, 1028, 1724, 1779
ScaI AGTACT 1 cut(s) 639
SchI GAGTC 3 cut(s) 509, 1499, 1682
ScrFI CCNGG 3 cut(s) 806, 851, 1611
SduI GDGCHC 2 cut(s) 750, 1332
SfaNI GCATC 8 cut(s) 221, 262, 320, 849, 883, 1212, 1411, 1810
SfcI CTRYAG 1 cut(s) 1218
SfoI GGCGCC 1 cut(s) 34
SinI GGWCC 3 cut(s) 1028, 1724, 1779
SmiMI CAYNNNNRTG 3 cut(s) 876, 1208, 1341
SmlI CTYRAG 4 cut(s) 818, 1191, 1396, 1849
SmoI CTYRAG 4 cut(s) 818, 1191, 1396, 1849
Sse9I AATT 9 cut(s) 56, 156, 394, 473, 614, 704, 1088, 1171, 1560
SseBI AGGCCT 1 cut(s) 524
SsiI CCGC 4 cut(s) 329, 413, 1528, 1757
SspDI GGCGCC 1 cut(s) 32
SspMI CTAG 3 cut(s) 762, 1268, 1383
SstI GAGCTC 2 cut(s) 750, 1332
StuI AGGCCT 1 cut(s) 524
StyD4I CCNGG 3 cut(s) 804, 849, 1609
StyI CCWWGG 3 cut(s) 145, 519, 835
TaaI ACNGT 6 cut(s) 190, 296, 410, 1361, 1433, 1512
TaiI ACGT 2 cut(s) 1501, 1800
TaqI TCGA 4 cut(s) 6, 75, 153, 750
TaqII GACCGA 1 cut(s) 1166
TasI AATT 9 cut(s) 56, 156, 394, 473, 614, 704, 1088, 1171, 1560
TatI WGTACW 1 cut(s) 637
TauI GCSGC 2 cut(s) 332, 1760
TfiI GAWTC 3 cut(s) 27, 82, 1055
Tru1I TTAA 2 cut(s) 159, 1850
Tru9I TTAA 2 cut(s) 159, 1850
TscAI CASTG 3 cut(s) 195, 321, 1366
TseFI GTSAC 1 cut(s) 359
TseI GCWGC 6 cut(s) 326, 1220, 1448, 1573, 1832, 1844
Tsp45I GTSAC 1 cut(s) 359
TspDTI ATGAA 8 cut(s) 494, 894, 972, 1179, 1325, 1563, 1568, 1728
TspGWI ACGGA 1 cut(s) 24
TspRI CASTG 3 cut(s) 195, 321, 1366
Vha464I CTTAAG 1 cut(s) 1849
VpaK11BI GGWCC 3 cut(s) 1028, 1724, 1779
VspI ATTAAT 1 cut(s) 159
XapI RAATTY 1 cut(s) 394
XbaI TCTAGA 1 cut(s) 1382
XmnI GAANNNNTTC 1 cut(s) 1097
XspI CTAG 3 cut(s) 762, 1268, 1383
ZrmI AGTACT 1 cut(s) 639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.