Epidermal patterning factor proteins
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80133 |
| fragaria_vesca | FvH4_1g03100 FvH4_6g29870 |
| malus_domestica | MD02G1030200.v1.1 MD15G1171700.v1.1 MD17G1210000.v1.1 |
| prunus_persica | Prupe.3G085300_v2.0.a1 Prupe.7G036700_v2.0.a1 Prupe.7G244400_v2.0.a1 |
| pyrus_communis | pycom15g15320 |
| rosa_chinensis | RchiOBHm_Chr2g0088241 RchiOBHm_Chr2g0135761 |
| rosa_laevigata | RLG00000015935 RLG00000019482 |
| rosa_multiflora | Rmu_sc0004235.1_g000048 |
| rosa_roxburghii | Rroxscaffold_2G00108880 |
| rosa_rugosa | Rorug01G0482300 Rorug02G0326300 |
| rosa_samantha | Rh2AG037300 Rh2AG377900 Rh2BG036500 Rh2BG384200 Rh2CG363500 Rh2DG037000 Rh2DG400600 |
| rosa_wichuraiana | Rw2G002930 Rw2G030780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 22 |
| AgsI | TTSAA | 3 cut(s) | 12, 133, 162 |
| AluBI | AGCT | 3 cut(s) | 31, 92, 285 |
| AluI | AGCT | 3 cut(s) | 31, 92, 285 |
| AsuHPI | GGTGA | 2 cut(s) | 118, 128 |
| BccI | CCATC | 2 cut(s) | 107, 142 |
| BclI | TGATCA | 1 cut(s) | 118 |
| BlpI | GCTNAGC | 1 cut(s) | 93 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 1 cut(s) | 236 |
| BsaBI | GATNNNNATC | 1 cut(s) | 117 |
| BsaJI | CCNNGG | 1 cut(s) | 235 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 137, 167 |
| Bse1I | ACTGG | 1 cut(s) | 98 |
| Bse8I | GATNNNNATC | 1 cut(s) | 117 |
| BseDI | CCNNGG | 1 cut(s) | 235 |
| BseJI | GATNNNNATC | 1 cut(s) | 117 |
| BseMII | CTCAG | 1 cut(s) | 84 |
| BseNI | ACTGG | 1 cut(s) | 98 |
| BsgI | GTGCAG | 1 cut(s) | 213 |
| Bsp143I | GATC | 1 cut(s) | 118 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 93 |
| Bsp19I | CCATGG | 1 cut(s) | 235 |
| BspCNI | CTCAG | 1 cut(s) | 85 |
| BsrI | ACTGG | 1 cut(s) | 98 |
| BssECI | CCNNGG | 1 cut(s) | 235 |
| BssMI | GATC | 1 cut(s) | 118 |
| BssT1I | CCWWGG | 1 cut(s) | 235 |
| Bst4CI | ACNGT | 1 cut(s) | 43 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 195, 204 |
| BstC8I | GCNNGC | 1 cut(s) | 209 |
| BstDEI | CTNAG | 2 cut(s) | 93, 171 |
| BstDSI | CCRYGG | 1 cut(s) | 235 |
| BstKTI | GATC | 1 cut(s) | 121 |
| BstMBI | GATC | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 195, 204 |
| BtgI | CCRYGG | 1 cut(s) | 235 |
| BtsIMutI | CAGTG | 1 cut(s) | 105 |
| Cac8I | GCNNGC | 1 cut(s) | 209 |
| Csp6I | GTAC | 1 cut(s) | 21 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 202, 237 |
| CviAII | CATG | 3 cut(s) | 190, 236, 300 |
| CviJI | RGCY | 6 cut(s) | 5, 31, 92, 97, 129, 285 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 31, 92, 97, 129, 285 |
| CviQI | GTAC | 1 cut(s) | 21 |
| DdeI | CTNAG | 2 cut(s) | 93, 171 |
| DpnI | GATC | 1 cut(s) | 120 |
| DpnII | GATC | 1 cut(s) | 118 |
| Eco130I | CCWWGG | 1 cut(s) | 235 |
| EcoT14I | CCWWGG | 1 cut(s) | 235 |
| ErhI | CCWWGG | 1 cut(s) | 235 |
| FaeI | CATG | 3 cut(s) | 193, 239, 303 |
| FaiI | YATR | 5 cut(s) | 50, 191, 200, 237, 301 |
| FatI | CATG | 3 cut(s) | 189, 235, 299 |
| FbaI | TGATCA | 1 cut(s) | 118 |
| Hin1II | CATG | 3 cut(s) | 193, 239, 303 |
| HinfI | GANTC | 1 cut(s) | 86 |
| HphI | GGTGA | 2 cut(s) | 118, 128 |
| Hpy188I | TCNGA | 1 cut(s) | 85 |
| Hpy188III | TCNNGA | 2 cut(s) | 12, 253 |
| HpyAV | CCTTC | 1 cut(s) | 90 |
| HpyCH4III | ACNGT | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 6 cut(s) | 189, 198, 207, 230, 309, 315 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 195, 204 |
| HpyF3I | CTNAG | 2 cut(s) | 93, 171 |
| Hsp92II | CATG | 3 cut(s) | 193, 239, 303 |
| Ksp22I | TGATCA | 1 cut(s) | 118 |
| Kzo9I | GATC | 1 cut(s) | 118 |
| LpnPI | CCDG | 4 cut(s) | 110, 111, 257, 301 |
| MalI | GATC | 1 cut(s) | 120 |
| MboI | GATC | 1 cut(s) | 118 |
| MboII | GAAGA | 1 cut(s) | 27 |
| MnlI | CCTC | 2 cut(s) | 177, 177 |
| MseI | TTAA | 1 cut(s) | 180 |
| MslI | CAYNNNNRTG | 2 cut(s) | 50, 304 |
| MspA1I | CMGCKG | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 195, 204 |
| NcoI | CCATGG | 1 cut(s) | 235 |
| NdeII | GATC | 1 cut(s) | 118 |
| NlaIII | CATG | 3 cut(s) | 193, 239, 303 |
| PfeI | GAWTC | 1 cut(s) | 86 |
| PvuII | CAGCTG | 1 cut(s) | 92 |
| RsaI | GTAC | 1 cut(s) | 22 |
| RsaNI | GTAC | 1 cut(s) | 21 |
| RseI | CAYNNNNRTG | 2 cut(s) | 50, 304 |
| SaqAI | TTAA | 1 cut(s) | 180 |
| Sau3AI | GATC | 1 cut(s) | 118 |
| SetI | ASST | 6 cut(s) | 33, 94, 188, 205, 287, 337 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 50, 304 |
| SmlI | CTYRAG | 1 cut(s) | 251 |
| SmoI | CTYRAG | 1 cut(s) | 251 |
| StyI | CCWWGG | 1 cut(s) | 235 |
| TaaI | ACNGT | 1 cut(s) | 43 |
| TfiI | GAWTC | 1 cut(s) | 86 |
| Tru1I | TTAA | 1 cut(s) | 180 |
| Tru9I | TTAA | 1 cut(s) | 180 |
| TscAI | CASTG | 1 cut(s) | 105 |
| TspDTI | ATGAA | 1 cut(s) | 294 |
| TspRI | CASTG | 1 cut(s) | 105 |