Rorug01G0482300

Epidermal patterning factor proteins

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
56976982 .. 56985019
8038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0482300.1

Sequence Viewer

Length: 3417 bp
ATGGAGAGTACAGATTCCGGCGATTTCAGCGTCGGATCGATCGTGTGGGTACGGCGGAGGAACGGGTCGTGGTGGCCGGGGAAGATAGTCGGGCCGGAAGAGCTCTCCACTTCGCATCTAACCTCGCCTCGCTCTGGTACCCCCGTCAAGCTTCTCGGTAGAGAAGACGCCAGTGTTGATTGGTACAATCTGGAAAAATCCAAGCGTGTTAAGCCATTTCGATGCGGTGATTTTGATGATTGCATTCACAAGGCTGAATCGGCGCAAGGTATGCCGCCAAAGAAAAGAGAAAAATATGCACGTCGAGAAGATGCTATTCTTCATGCGCTTGAACTTGAGAGGCAACTGTTGAGGAAACAAGGAAAGTCAACTTCTGAATACATGAACAGTAAATATGGCGCTGTGAAGGAGGCAGTTATACCCTCAGAAAGTTTGGGAAAAGACCATTCAAAACTTGGGAATTCCAAATCGCATCAGTTATACAAGCGAAAAGATTCATTTCATAAGAAGGATATTATAGGTAGTCCCCTGTCTTCTCAAAGACTCAAAGAGGGAACTCAATTGAGTGGTGAAGATGATCGTTTTGAAGTGACACCTCGAATGAGAGGCTTGCAGGACTTTGGTCTGAAAATTGCCTCTTCAAAGCGAAAACTTTCATCTTCCTCTACTTCAAACGGTTTTTGGAAACCCACAATTGATGGTACTTATCAAGCATTTGCTCATGGTGGCCTCAGCCTGGGAGGAACAAGTCACGTGAACGGAGCGGAGCAGACGGGAGCTATTTGCAGAGCAAAGAGGAGTAAATGTGTATACTTGCCAGCTGACTCTGGTGATTCTTTGGAGTATGAAGCAGCACCTTCAGGCCATATTGAGATATCAGCTTCCCCTGTTGGCACTCGTCTACATGCTGAGAGTTTGATTGAGGACAACACTTCTGGGTTTACAGAAGATCTAGAGGAGTCCAATTCTTCTGAAACTGATTCCTCTGACCATGGATCTGATTCCTCAGAGACTGAACCGGATATGGATGAAGAGATGCCTTCATTTTCAGATCCAGAAGTAGGAAGATATGAAGCACAAGAACGTAGAAGCTTGGTTGATGAGGAGCCAGATGAATCAACACATTCTGGCGACATGCCCCACCTCTATAATCAGGACCCTTATTTTGCAAGTGAAGCTGTGTCCAAATGGCAGTTGAAAGGGAAAAGGAATACCCGCAATCTTAGTAAAAGATCAATTGATACAACTGAAGGAAGAGGTTATTTTTATGGACCATATTCTGAAGAAAAGGCGGAGATGAGTGGAATGGACGATGGGTACCCCCTATCAAGAGCTGCATCAAGAAGTCGAAACAGGGTTGGTCTGAATATGATTGATTGGGAGGATGGGACCTGGGAAGACAGGTCTGCCTGGGATGAATGCTGGGACATCAAAAGAGAGCGATTTGACCCGGTATATGATGATCGCTATAATCATCGCAGGAGGCCAAAATACTTGATAGATGTGGACTTGAAAGTCCAGGCAAGTTACCAGAAAGAGCCTGTCCCTATTGTTTCTCTGATGAGCAAGTTAAACGGGAAGGCAATAATAGGGCACCCCATCCAAGTTGAAGCCTTAGAAGATGGTTTATCTAACACGCTTCTTTCAACATTTGATGATTCTGGTGAGGAAGCAATTGACAATGATGGGGGTACAACTCTTCCGCACGCATGGAGGACTGCAAGGAGGACAGCAAATGTTAGAGTCCCGCGTCCTCATTTATTTTCTACATTGGATGGTGATGATGCTGCCGATGACCTTCCCTTTTTCGATGAAGGTAGACCACCATTCAAGAAATTAAATATGGGGAGTTCCAGTCACAAGGCAAGCCAGGTCAGGAGGAACCCTCCTCACAACTCCCGGCTTCCCACTGATAGAAAGTTCTCGAAAAAGGTGTCTAAGAAAGTAAGCTTATCATCTAGCCTGAAAACGAAAACGAGGACCTTATCTTCTTTAGCCATTCAACAGAATTATGGTAACAAGGGAATGATACAATATGATAGTGGCCAAAGGGATAGGTTGGTGAAACCAGAGTCTTCTGTATCTGTGCCCACAACTGTAGCTTGCATTCCTGTGAAATTAGTTTTCAGTAGGTTACTCGAGAAGATCAATAGGCCGCCATCAAAAGCAACAGCAGCAGCAGCCAGTAATGCGGTGAAGATGAAGCAGGTAGATGAGGAAGCAGCCATGTACAGCAAAGAGAGAGAAGGTTGTCAACTGCATGTTTGCTGGAAATGGATTTCTGGAGGAACAAGGCTCGTGTTAGGCAGGAACTGTAGTAAGGTAGAGAAACACAGAAAGCTCAAAGCTTTGAGAGAGCACCTGATCGGAAAAACAGAACCGGCTGAGCTCAACTCAACTGAACCGATGAATTGGAGAAGCAGTTGGCTTAGCCTCACTAAGGTTTACAAAGCTGCGGCAGCAGATTCCAAATGTGGCTCTTTCTTGTGGTCAGGGCTAGCTTTGTCTCGGAAATTTGGAGACAAGGCTAAGGCTGATACTGGGTTTGAGCTGAATAGGGACTTCCTTGTACAGCTATGGATGGCGGATAAGGAAATGGAGCAGTTTCGGAGAAAATCGAGACGGAGGGCTGTTGAGCAAGATGAGAATAGCGTGGTTGGGAAGCAACCACCTGTGAGCCAATCCATCTCGGGATATCTGAAGCCGGAATCTCCAGAAGAGGTCCAGGTGATGCCTCTTCTTGCTAGATCAAATATGCTCGTTACTAGGAATATAGAGTGGGCAAATCTTATGCTTGGGTTTGAGCAGGAAAATCGGTATGCCATAGTAGATGTATGCTATCCACAATCGCCTGTAGGTTTCATTCGTGAGGAGAGTCATGTTATCATGAGACAGTTACTTCGCCAGCGGCGTCCTTTTGTTGCTCGAGTAACTGATGGCATGGGTAATGAGCTCTTTAGGGTTCGCAGGCCTTTTTGGTGGATAAACAGCTCAATTTATGCAGAGATCAATGGTAAGGAAGTTGGTGTGGTTCACAGACGATGGCATTTGTGGAGAAGGATATATGATTTGTACCTAGGGAATAAACAATTTGCAGTTGTTGAAAATCCTGGATTCTGGCATTGGACATTTACTTTGAAGGACATTGATGGGGGTGTTTTGGCTGAGATAGATCGTGATTGGAGGGGTTTTGGCTTTGAGCTGTTTACTGATGCTGGGCAATATGTGATTCGGTTTGGGAGCTCTGATCCCAGCTCCAAGATAGGCCTTGCTAGCCAGATTGAAGAGTTGGAAGTAGTTCGCCCATTGACTCTGTCAGAGAGAGCTGTAACTCTTGCTCTTGCTATATCGTTGGATAACGACTATTTTTCAAGACATGGTGGATGGGGAATACCTTATTTTGATGTAGGTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1138

Amino Acids

128.47

Weight (kDa)

8.21

Isoelectric Point (pI)

54.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 12 - 92 1.5e-10 PWWP domain
Scramblase PF03803 902 - 1125 5e-62 Scramblase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1514
Acc36I ACCTGC 1 cut(s) 2197
Acc65I GGTACC 2 cut(s) 137, 1317
AccB1I GGYRCC 3 cut(s) 137, 1317, 1593
AccBSI CCGCTC 1 cut(s) 764
AccI GTMKAC 3 cut(s) 810, 901, 1819
AccII CGCG 1 cut(s) 1750
AclWI GGATC 4 cut(s) 43, 1003, 1046, 3242
AcoI YGGCCR 2 cut(s) 74, 2044
AcsI RAATTY 2 cut(s) 460, 2513
AcuI CTGAAG 4 cut(s) 843, 1269, 1302, 2720
AcvI CACGTG 1 cut(s) 754
AcyI GRCGYC 2 cut(s) 168, 2911
AfiI CCNNNNNNNGG 4 cut(s) 134, 736, 1061, 2440
AjiI CACGTC 1 cut(s) 302
AjnI CCWGG 7 cut(s) 735, 1391, 1409, 1518, 1869, 2724, 3109
Alw21I GWGCWC 5 cut(s) 105, 2361, 2391, 2955, 3245
Alw26I GTCTC 5 cut(s) 1004, 2511, 2514, 2614, 2884
AlwI GGATC 4 cut(s) 43, 1003, 1046, 3242
AlwNI CAGNNNCTG 2 cut(s) 1013, 2313
Ama87I CYCGRG 3 cut(s) 2138, 2689, 2925
AoxI GGCC 9 cut(s) 74, 92, 727, 862, 1484, 2044, 2153, 2969, 3265
ApeKI GCWGC 9 cut(s) 851, 1334, 1787, 2174, 2177, 2180, 2222, 2453, 2459
ApoI RAATTY 2 cut(s) 460, 2513
ArsI GACNNNNNNTTYG 8 cut(s) 1148, 1180, 1919, 1951, 2883, 2915, 3118, 3150
Asp700I GAANNNNTTC 3 cut(s) 493, 652, 3297
Asp718I GGTACC 2 cut(s) 137, 1317
AspA2I CCTAGG 1 cut(s) 3076
AspLEI GCGC 3 cut(s) 265, 328, 401
AspS9I GGNCC 6 cut(s) 92, 1156, 1271, 1389, 1980, 2722
AsuC2I CCSGG 3 cut(s) 78, 1451, 1900
AsuHPI GGTGA 8 cut(s) 239, 581, 842, 1676, 1790, 2074, 2206, 2740
AsuNHI GCTAGC 2 cut(s) 2497, 3272
AvaI CYCGRG 3 cut(s) 2138, 2689, 2925
AvaII GGWCC 5 cut(s) 1156, 1271, 1389, 1980, 2722
AvrII CCTAGG 1 cut(s) 3076
BaeGI GKGCMC 2 cut(s) 1596, 2091
BaeI ACNNNNGTAYC 2 cut(s) 129, 162
BalI TGGCCA 1 cut(s) 2046
BanI GGYRCC 3 cut(s) 137, 1317, 1593
BanII GRGCYC 4 cut(s) 105, 2391, 2955, 3245
BauI CACGAG 1 cut(s) 2297
BbrPI CACGTG 1 cut(s) 754
BbsI GAAGAC 4 cut(s) 171, 525, 1404, 2067
Bbv12I GWGCWC 5 cut(s) 105, 2361, 2391, 2955, 3245
BbvCI CCTCAGC 1 cut(s) 731
BbvI GCAGC 9 cut(s) 863, 1321, 1774, 2186, 2189, 2192, 2234, 2440, 2471
BceAI ACGGC 1 cut(s) 68
BcgI CGANNNNNNTGC 2 cut(s) 2795, 2829
BciT130I CCWGG 7 cut(s) 737, 1393, 1411, 1520, 1871, 2726, 3111
BcnI CCSGG 3 cut(s) 78, 1451, 1900
BcoDI GTCTC 5 cut(s) 1004, 2511, 2514, 2614, 2884
BfaI CTAG 7 cut(s) 953, 1959, 2498, 2745, 2766, 3077, 3273
BfmI CTRYAG 3 cut(s) 2097, 2314, 2853
BfoI RGCGCY 1 cut(s) 402
BfuAI ACCTGC 1 cut(s) 2197
BglII AGATCT 1 cut(s) 949
BlnI CCTAGG 1 cut(s) 3076
BlpI GCTNAGC 2 cut(s) 2385, 2429
Bme18I GGWCC 5 cut(s) 1156, 1271, 1389, 1980, 2722
BmeT110I CYCGRG 3 cut(s) 2138, 2689, 2925
BmgBI CACGTC 1 cut(s) 302
BmgT120I GGNCC 6 cut(s) 92, 1156, 1271, 1389, 1980, 2722
BmiI GGNNCC 7 cut(s) 139, 1107, 1158, 1319, 1390, 1595, 1883
BmrI ACTGGG 1 cut(s) 2550
BmsI GCATC 9 cut(s) 124, 212, 301, 481, 1026, 1346, 1774, 2721, 3202
BmtI GCTAGC 2 cut(s) 2501, 3276
BmuI ACTGGG 1 cut(s) 2550
BoxI GACNNNNGTC 1 cut(s) 621
BpiI GAAGAC 4 cut(s) 171, 525, 1404, 2067
BplI GAGNNNNNCTC 4 cut(s) 1870, 1902, 2378, 2410
BpmI CTGGAG 2 cut(s) 2304, 2697
Bpu10I CCTNAGC 2 cut(s) 731, 2529
Bpu1102I GCTNAGC 2 cut(s) 2385, 2429
BpuEI CTTGAG 1 cut(s) 356
BpuMI CCSGG 3 cut(s) 78, 1451, 1900
Bsa29I ATCGAT 1 cut(s) 38
BsaAI YACGTR 1 cut(s) 754
BsaHI GRCGYC 2 cut(s) 168, 2911
BsaJI CCNNGG 6 cut(s) 77, 736, 991, 1392, 1410, 3076
BsaWI WCCGGW 1 cut(s) 1018
BsaXI ACNNNNNCTCC 6 cut(s) 790, 820, 1840, 1870, 2407, 2437
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 736, 1061, 2440
Bse118I RCCGGY 1 cut(s) 2380
Bse1I ACTGG 4 cut(s) 171, 1854, 2184, 2545
BseBI CCWGG 7 cut(s) 737, 1393, 1411, 1520, 1871, 2726, 3111
BseCI ATCGAT 1 cut(s) 38
BseDI CCNNGG 6 cut(s) 77, 736, 991, 1392, 1410, 3076
BseGI GGATG 7 cut(s) 1033, 1390, 1420, 1599, 1780, 2586, 3389
BseLI CCNNNNNNNGG 4 cut(s) 134, 736, 1061, 2440
BseMII CTCAG 6 cut(s) 438, 745, 900, 1020, 2376, 3156
BseNI ACTGG 4 cut(s) 171, 1854, 2184, 2545
BseRI GAGGAG 5 cut(s) 811, 971, 1118, 1878, 2885
BseSI GKGCMC 2 cut(s) 1596, 2091
BseXI GCAGC 9 cut(s) 863, 1321, 1774, 2186, 2189, 2192, 2234, 2440, 2471
BseYI CCCAGC 3 cut(s) 1422, 3215, 3251
Bsh1236I CGCG 1 cut(s) 1750
Bsh1285I CGRYCG 1 cut(s) 42
BshFI GGCC 9 cut(s) 76, 94, 729, 864, 1486, 2046, 2155, 2971, 3267
BshNI GGYRCC 3 cut(s) 137, 1317, 1593
BshVI ATCGAT 1 cut(s) 38
BsiEI CGRYCG 1 cut(s) 42
BsiHKAI GWGCWC 5 cut(s) 105, 2361, 2391, 2955, 3245
BsiHKCI CYCGRG 3 cut(s) 2138, 2689, 2925
BsiSI CCGG 8 cut(s) 18, 77, 95, 1019, 1451, 1900, 2381, 2705
BslFI GGGAC 6 cut(s) 510, 1402, 1439, 1529, 1730, 2573
BslI CCNNNNNNNGG 4 cut(s) 134, 736, 1061, 2440
BsmAI GTCTC 5 cut(s) 1004, 2511, 2514, 2614, 2884
BsmBI CGTCTC 1 cut(s) 2614
BsmFI GGGAC 6 cut(s) 510, 1402, 1439, 1529, 1730, 2573
BsmI GAATGC 3 cut(s) 243, 1424, 2106
BsnI GGCC 9 cut(s) 76, 94, 729, 864, 1486, 2046, 2155, 2971, 3267
BsoBI CYCGRG 3 cut(s) 2138, 2689, 2925
Bsp1286I GDGCHC 7 cut(s) 105, 1596, 2091, 2361, 2391, 2955, 3245
Bsp1407I TGTACA 2 cut(s) 2229, 2569
Bsp1720I GCTNAGC 2 cut(s) 2385, 2429
Bsp19I CCATGG 1 cut(s) 991
BspANI GGCC 9 cut(s) 76, 94, 729, 864, 1486, 2046, 2155, 2971, 3267
BspCNI CTCAG 6 cut(s) 437, 744, 901, 1019, 2377, 3157
BspDI ATCGAT 1 cut(s) 38
BspFNI CGCG 1 cut(s) 1750
BspHI TCATGA 1 cut(s) 2886
BspLI GGNNCC 7 cut(s) 139, 1107, 1158, 1319, 1390, 1595, 1883
BspMI ACCTGC 1 cut(s) 2197
BspOI GCTAGC 2 cut(s) 2501, 3276
BspPI GGATC 4 cut(s) 43, 1003, 1046, 3242
BspQI GCTCTTC 1 cut(s) 93
BspT107I GGYRCC 3 cut(s) 137, 1317, 1593
BsrBI CCGCTC 1 cut(s) 764
BsrFI RCCGGY 1 cut(s) 2380
BsrGI TGTACA 2 cut(s) 2229, 2569
BsrI ACTGG 4 cut(s) 171, 1854, 2184, 2545
BssAI RCCGGY 1 cut(s) 2380
BssECI CCNNGG 6 cut(s) 77, 736, 991, 1392, 1410, 3076
BssNAI GTATAC 1 cut(s) 811
BssNI GRCGYC 2 cut(s) 168, 2911
BssSI CACGAG 1 cut(s) 2297
BssT1I CCWWGG 2 cut(s) 991, 3076
Bst1107I GTATAC 1 cut(s) 811
Bst2BI CACGAG 1 cut(s) 2297
Bst2UI CCWGG 7 cut(s) 737, 1393, 1411, 1520, 1871, 2726, 3111
Bst4CI ACNGT 6 cut(s) 348, 389, 677, 2098, 2315, 2895
Bst6I CTCTTC 8 cut(s) 93, 643, 1026, 1249, 1704, 2712, 2742, 3279
BstACI GRCGYC 2 cut(s) 168, 2911
BstAPI GCANNNNNTGC 1 cut(s) 271
BstAUI TGTACA 2 cut(s) 2229, 2569
BstBAI YACGTR 1 cut(s) 754
BstC8I GCNNGC 9 cut(s) 611, 819, 1707, 1867, 2104, 2499, 2906, 2969, 3274
BstDSI CCRYGG 1 cut(s) 991
BstENI CCTNNNNNAGG 1 cut(s) 2438
BstF5I GGATG 7 cut(s) 1033, 1390, 1420, 1599, 1780, 2586, 3389
BstFNI CGCG 1 cut(s) 1750
BstH2I RGCGCY 1 cut(s) 402
BstHHI GCGC 3 cut(s) 265, 328, 401
BstMAI GTCTC 5 cut(s) 1004, 2511, 2514, 2614, 2884
BstMCI CGRYCG 1 cut(s) 42
BstNI CCWGG 7 cut(s) 737, 1393, 1411, 1520, 1871, 2726, 3111
BstNSI RCATGY 3 cut(s) 908, 1138, 2264
BstPAI GACNNNNGTC 1 cut(s) 621
BstSFI CTRYAG 3 cut(s) 2097, 2314, 2853
BstSLI GKGCMC 2 cut(s) 1596, 2091
BstUI CGCG 1 cut(s) 1750
BstV1I GCAGC 9 cut(s) 863, 1321, 1774, 2186, 2189, 2192, 2234, 2440, 2471
BstV2I GAAGAC 4 cut(s) 171, 525, 1404, 2067
BstX2I RGATCY 3 cut(s) 949, 995, 1051
BstYI RGATCY 3 cut(s) 949, 995, 1051
BstZ17I GTATAC 1 cut(s) 811
Bsu15I ATCGAT 1 cut(s) 38
BsuRI GGCC 9 cut(s) 76, 94, 729, 864, 1486, 2046, 2155, 2971, 3267
BsuTUI ATCGAT 1 cut(s) 38
BtgI CCRYGG 1 cut(s) 991
BtgZI GCGATG 1 cut(s) 1460
BtrI CACGTC 1 cut(s) 302
BtsCI GGATG 7 cut(s) 1033, 1390, 1420, 1599, 1780, 2586, 3389
BtsIMutI CAGTG 2 cut(s) 178, 1908
BveI ACCTGC 1 cut(s) 2197
Cac8I GCNNGC 9 cut(s) 611, 819, 1707, 1867, 2104, 2499, 2906, 2969, 3274
CaiI CAGNNNCTG 2 cut(s) 1013, 2313
CciI TCATGA 1 cut(s) 2886
CfoI GCGC 3 cut(s) 265, 328, 401
Cfr10I RCCGGY 1 cut(s) 2380
Cfr13I GGNCC 6 cut(s) 92, 1156, 1271, 1389, 1980, 2722
ClaI ATCGAT 1 cut(s) 38
CseI GACGC 4 cut(s) 19, 176, 1739, 2900
DrdI GACNNNNNNGTC 1 cut(s) 1514
DseDI GACNNNNNNGTC 1 cut(s) 1514
EaeI YGGCCR 2 cut(s) 74, 2044
Eam1104I CTCTTC 8 cut(s) 93, 643, 1026, 1249, 1704, 2712, 2742, 3279
EarI CTCTTC 8 cut(s) 93, 643, 1026, 1249, 1704, 2712, 2742, 3279
EciI GGCGGA 3 cut(s) 70, 1307, 2600
Ecl136II GAGCTC 4 cut(s) 103, 2389, 2953, 3243
Eco130I CCWWGG 2 cut(s) 991, 3076
Eco147I AGGCCT 2 cut(s) 2971, 3267
Eco24I GRGCYC 4 cut(s) 105, 2391, 2955, 3245
Eco32I GATATC 2 cut(s) 876, 2696
Eco47I GGWCC 5 cut(s) 1156, 1271, 1389, 1980, 2722
Eco53kI GAGCTC 4 cut(s) 103, 2389, 2953, 3243
Eco57I CTGAAG 4 cut(s) 843, 1269, 1302, 2720
Eco72I CACGTG 1 cut(s) 754
Eco88I CYCGRG 3 cut(s) 2138, 2689, 2925
EcoICRI GAGCTC 4 cut(s) 103, 2389, 2953, 3243
EcoNI CCTNNNNNAGG 1 cut(s) 2438
EcoO109I RGGNCCY 3 cut(s) 1156, 1389, 1980
EcoRI GAATTC 1 cut(s) 460
EcoRII CCWGG 7 cut(s) 735, 1391, 1409, 1518, 1869, 2724, 3109
EcoRV GATATC 2 cut(s) 876, 2696
EcoT14I CCWWGG 2 cut(s) 991, 3076
EcoT38I GRGCYC 4 cut(s) 105, 2391, 2955, 3245
ErhI CCWWGG 2 cut(s) 991, 3076
Esp3I CGTCTC 1 cut(s) 2614
FaqI GGGAC 6 cut(s) 510, 1402, 1439, 1529, 1730, 2573
FauI CCCGC 2 cut(s) 1223, 1755
FblI GTMKAC 3 cut(s) 810, 901, 1819
FokI GGATG 7 cut(s) 1040, 1397, 1427, 1586, 1787, 2593, 3396
FriOI GRGCYC 4 cut(s) 105, 2391, 2955, 3245
FspBI CTAG 7 cut(s) 953, 1959, 2498, 2745, 2766, 3077, 3273
GlaI GCGC 3 cut(s) 264, 327, 400
GsaI CCCAGC 3 cut(s) 1426, 3219, 3255
GsuI CTGGAG 2 cut(s) 2304, 2697
HaeII RGCGCY 1 cut(s) 402
HaeIII GGCC 9 cut(s) 76, 94, 729, 864, 1486, 2046, 2155, 2971, 3267
HapII CCGG 8 cut(s) 18, 77, 95, 1019, 1451, 1900, 2381, 2705
HgaI GACGC 4 cut(s) 19, 176, 1739, 2900
HhaI GCGC 3 cut(s) 265, 328, 401
Hin1I GRCGYC 2 cut(s) 168, 2911
Hin6I GCGC 3 cut(s) 263, 326, 399
HinP1I GCGC 3 cut(s) 263, 326, 399
HincII GTYRAC 2 cut(s) 369, 2255
HindII GTYRAC 2 cut(s) 369, 2255
HindIII AAGCTT 4 cut(s) 149, 1090, 1948, 2346
HpaII CCGG 8 cut(s) 18, 77, 95, 1019, 1451, 1900, 2381, 2705
HphI GGTGA 8 cut(s) 239, 581, 842, 1676, 1790, 2074, 2206, 2740
Hpy99I CGWCG 2 cut(s) 35, 306
HpyCH4III ACNGT 6 cut(s) 348, 389, 677, 2098, 2315, 2895
HpyCH4IV ACGT 3 cut(s) 301, 753, 1084
HpySE526I ACGT 3 cut(s) 301, 753, 1084
Hsp92I GRCGYC 2 cut(s) 168, 2911
HspAI GCGC 3 cut(s) 263, 326, 399
KpnI GGTACC 2 cut(s) 141, 1321
LguI GCTCTTC 1 cut(s) 93
LmnI GCTCC 7 cut(s) 761, 766, 776, 1105, 2599, 3240, 3260
Lsp1109I GCAGC 9 cut(s) 863, 1321, 1774, 2186, 2189, 2192, 2234, 2440, 2471
LweI GCATC 9 cut(s) 124, 212, 301, 481, 1026, 1346, 1774, 2721, 3202
MaeI CTAG 7 cut(s) 953, 1959, 2498, 2745, 2766, 3077, 3273
MaeII ACGT 3 cut(s) 301, 753, 1084
MbiI CCGCTC 1 cut(s) 764
MfeI CAATTG 4 cut(s) 560, 693, 1236, 1674
MflI RGATCY 3 cut(s) 949, 995, 1051
MhlI GDGCHC 7 cut(s) 105, 1596, 2091, 2361, 2391, 2955, 3245
MlsI TGGCCA 1 cut(s) 2046
MluNI TGGCCA 1 cut(s) 2046
MlyI GAGTC 7 cut(s) 537, 818, 968, 1752, 2081, 2884, 3304
MmeI TCCRAC 3 cut(s) 13, 3270, 3333
Mox20I TGGCCA 1 cut(s) 2046
MroXI GAANNNNTTC 3 cut(s) 493, 652, 3297
MscI TGGCCA 1 cut(s) 2046
MseI TTAA 3 cut(s) 210, 1571, 1838
MslI CAYNNNNRTG 2 cut(s) 220, 2111
Msp20I TGGCCA 1 cut(s) 2046
MspA1I CMGCKG 2 cut(s) 821, 2908
MspI CCGG 8 cut(s) 18, 77, 95, 1019, 1451, 1900, 2381, 2705
MunI CAATTG 4 cut(s) 560, 693, 1236, 1674
Mva1269I GAATGC 3 cut(s) 243, 1424, 2106
MvaI CCWGG 7 cut(s) 737, 1393, 1411, 1520, 1871, 2726, 3111
MvnI CGCG 1 cut(s) 1750
NciI CCSGG 3 cut(s) 78, 1451, 1900
NcoI CCATGG 1 cut(s) 991
NheI GCTAGC 2 cut(s) 2497, 3272
NlaIV GGNNCC 7 cut(s) 139, 1107, 1158, 1319, 1390, 1595, 1883
NmuCI GTSAC 3 cut(s) 589, 749, 1856
NspI RCATGY 3 cut(s) 908, 1138, 2264
PaeR7I CTCGAG 2 cut(s) 2138, 2925
PagI TCATGA 1 cut(s) 2886
PceI AGGCCT 2 cut(s) 2971, 3267
PciSI GCTCTTC 1 cut(s) 93
PcsI WCGNNNNNNNCGW 2 cut(s) 39, 2908
PctI GAATGC 3 cut(s) 243, 1424, 2106
PdmI GAANNNNTTC 3 cut(s) 493, 652, 3297
PflFI GACNNNGTC 1 cut(s) 3313
PfoI TCCNGGA 1 cut(s) 3109
Ple19I CGATCG 1 cut(s) 42
PleI GAGTC 7 cut(s) 537, 818, 967, 1751, 2080, 2883, 3304
PmaCI CACGTG 1 cut(s) 754
PmlI CACGTG 1 cut(s) 754
PpsI GAGTC 7 cut(s) 537, 818, 967, 1751, 2080, 2883, 3304
Ppu21I YACGTR 1 cut(s) 754
PpuMI RGGWCCY 3 cut(s) 1156, 1389, 1980
PshAI GACNNNNGTC 1 cut(s) 621
Psp124BI GAGCTC 4 cut(s) 105, 2391, 2955, 3245
Psp5II RGGWCCY 3 cut(s) 1156, 1389, 1980
Psp6I CCWGG 7 cut(s) 735, 1391, 1409, 1518, 1869, 2724, 3109
PspCI CACGTG 1 cut(s) 754
PspFI CCCAGC 3 cut(s) 1422, 3215, 3251
PspGI CCWGG 7 cut(s) 735, 1391, 1409, 1518, 1869, 2724, 3109
PspN4I GGNNCC 7 cut(s) 139, 1107, 1158, 1319, 1390, 1595, 1883
PspPI GGNCC 6 cut(s) 92, 1156, 1271, 1389, 1980, 2722
PspPPI RGGWCCY 3 cut(s) 1156, 1389, 1980
PspXI VCTCGAGB 1 cut(s) 2925
PstNI CAGNNNCTG 2 cut(s) 1013, 2313
PsuI RGATCY 3 cut(s) 949, 995, 1051
PsyI GACNNNGTC 1 cut(s) 3313
PvuI CGATCG 1 cut(s) 42
PvuII CAGCTG 1 cut(s) 821
RseI CAYNNNNRTG 2 cut(s) 220, 2111
SacI GAGCTC 4 cut(s) 105, 2391, 2955, 3245
SapI GCTCTTC 1 cut(s) 93
SaqAI TTAA 3 cut(s) 210, 1571, 1838
Sau96I GGNCC 6 cut(s) 92, 1156, 1271, 1389, 1980, 2722
SchI GAGTC 7 cut(s) 537, 818, 968, 1752, 2081, 2884, 3304
SduI GDGCHC 7 cut(s) 105, 1596, 2091, 2361, 2391, 2955, 3245
SfaNI GCATC 9 cut(s) 124, 212, 301, 481, 1026, 1346, 1774, 2721, 3202
SfcI CTRYAG 3 cut(s) 2097, 2314, 2853
Sfr274I CTCGAG 2 cut(s) 2138, 2925
SinI GGWCC 5 cut(s) 1156, 1271, 1389, 1980, 2722
SlaI CTCGAG 2 cut(s) 2138, 2925
SmiMI CAYNNNNRTG 2 cut(s) 220, 2111
SmlI CTYRAG 3 cut(s) 335, 2138, 2925
SmoI CTYRAG 3 cut(s) 335, 2138, 2925
SseBI AGGCCT 2 cut(s) 2971, 3267
SspMI CTAG 7 cut(s) 953, 1959, 2498, 2745, 2766, 3077, 3273
SstI GAGCTC 4 cut(s) 105, 2391, 2955, 3245
StuI AGGCCT 2 cut(s) 2971, 3267
StyI CCWWGG 2 cut(s) 991, 3076
TaaI ACNGT 6 cut(s) 348, 389, 677, 2098, 2315, 2895
TaiI ACGT 3 cut(s) 304, 756, 1087
TatI WGTACW 3 cut(s) 8, 2229, 2569
TauI GCSGC 4 cut(s) 277, 2158, 2459, 2911
Tru1I TTAA 3 cut(s) 210, 1571, 1838
Tru9I TTAA 3 cut(s) 210, 1571, 1838
TscAI CASTG 2 cut(s) 178, 1915
TseFI GTSAC 3 cut(s) 589, 749, 1856
TseI GCWGC 9 cut(s) 851, 1334, 1787, 2174, 2177, 2180, 2222, 2453, 2459
Tsp45I GTSAC 3 cut(s) 589, 749, 1856
TspGWI ACGGA 2 cut(s) 774, 2638
TspRI CASTG 2 cut(s) 178, 1915
Tth111I GACNNNGTC 1 cut(s) 3313
VpaK11BI GGWCC 5 cut(s) 1156, 1271, 1389, 1980, 2722
XagI CCTNNNNNAGG 1 cut(s) 2438
XapI RAATTY 2 cut(s) 460, 2513
XbaI TCTAGA 1 cut(s) 952
XceI RCATGY 3 cut(s) 908, 1138, 2264
XcmI CCANNNNNNNNNTGG 1 cut(s) 452
XhoI CTCGAG 2 cut(s) 2138, 2925
XmaJI CCTAGG 1 cut(s) 3076
XmiI GTMKAC 3 cut(s) 810, 901, 1819
XmnI GAANNNNTTC 3 cut(s) 493, 652, 3297
XspI CTAG 7 cut(s) 953, 1959, 2498, 2745, 2766, 3077, 3273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.