Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007775

Physical Location & Seq

Genomic Coordinates Reverse (-)

20966643 .. 20968981

Gene Structure 2339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G246600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGCCAAGGCCAGGGCCAAGACCTTATGAGTGTGTGAGGCGAGCTTGGCACAGCGATAGACACCAACCCATGAGAGGTTCTATCATTCAGCAGATTTTCAGGGTCGTCAGTGAGGTTCATGGCTCCGTAACTAAGAAGAACAAGGAATGGCAAGAAAAGCTACCTATGGTGGTTTTTAAAGCAGAGGAAATTATGTATTCCAAAGCCAATTCAGAGGCTGAGTACATGAATCTTGAAACGCTATGGGACAGAGTAAATGACGCTGTTAACACAATTATCCGGCGAGATGAGGGCACTGAAACCGGAGAGCTTTTGCCGCCTTGTGTTGAAGCTGCCCTTAATCTGGGTTGCATTCCAGTAAGAGCTTCAAGAAGCCAACGCCACAGTAATCCAAGGATTTACCTCACTTCAAGAGCACAAGAACCCCCTTCTGCTCCCACTAGGATTTTGGATAGAACTACTGATGAAAGACGCCCTCAGTTTCCTCCACACCGCTCTGGCAATCAATTGAACTTTGCAAAAGCCTCAACTGGGAATTCTGCACATTCGGTCCCAGAATCTTACAGCCGCATCAACCAAAATACTAACCTCAATAGCCGTCGGAATGACCCTTTTTCACGCGAGAATCTTCCTGCTGGCCATAACCAGTTAACAACAATGTCAACCAACAACTCCTTGGACTTGGGTTCAGTGTATCCATTATATTATGGAGCTCACTATCAATTCGAAGAGTGCCAGGTAGGTCCTCAGGTCCCAGAAAACACACATTCTAGGACTATATATGTTGGCAAACCAATTGTTACCTCGATTGCGGAGCCTACTAAGCACAACCTTTTCTCCTCGCAAACTGCTGAAAATGTGTCACACAGAATCACACAAGTAGAAGTCCATGATAAGCCACTAGAAACGGAATGTGATTTATCATTGAGGTTGGGTCCTGTCTTGCACCCATGTATTCAAAGAAGCTTGGCCAGTGAAACGGAAGATATTGGTTCAAGCAGTTCTCAAGATGGGGGAAAATTAAATGATTTGTCACCATCGATAAGTAAGGAAATCTGTTTCTTTCCCACAAAGACTGCTTGTGATCGCTTTGAGTCCACTTCAAGTATGTGGAATTCAGAGGGTGAAGGTCGGAGTTTGGAGGCAACTGTAAGGAAGCGCAAGGCACCTTTTTGTAGCAATGAAGAGGATGGGAAATTTTGCGAGCAACCAGATGTCCTGCCCAACAGATTGACTGATCGAACTACAGGGCCTGGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

421

Amino Acids

47.23

Weight (kDa)

6.68

Isoelectric Point (pI)

55.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24150 AT3G24150
fragaria_vesca	FvH4_1g02850
malus_domestica	MD02G1028200.v1.1 MD15G1169900.v1.1
prunus_persica	Prupe.7G246600_v2.0.a1 Prupe.7G246600_v2.0.a1
pyrus_communis	pycom02g02320 pycom15g15150
rosa_chinensis	RchiOBHm_Chr1g0374351 RchiOBHm_Chr2g0087961
rosa_laevigata	RLG00000015914
rosa_multiflora	Rmu_sc0003275.1_g000002
rosa_roxburghii	Rroxscaffold_2G00153100
rosa_rugosa	Rorug01G0480000 Rorug01G0480100 Rorug01G0480100 Rorug01G0480100
rosa_samantha	Rh2AG034700 Rh2BG033700 Rh2CG034700 Rh2DG034500
rosa_wichuraiana	Rw1G034100 Rw2G002710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1165
AccBSI	CCGCTC	1 cut(s)	495
AccII	CGCG	1 cut(s)	621
AciI	CCGC	4 cut(s)	317, 493, 568, 812
AcoI	YGGCCR	2 cut(s)	637, 969
AcsI	RAATTY	3 cut(s)	535, 1114, 1196
AcyI	GRCGYC	1 cut(s)	472
AfaI	GTAC	1 cut(s)	224
AfiI	CCNNNNNNNGG	4 cut(s)	11, 74, 343, 531
AgsI	TTSAA	8 cut(s)	236, 329, 369, 411, 511, 959, 996, 1104
AjnI	CCWGG	3 cut(s)	10, 735, 1252
AluBI	AGCT	7 cut(s)	44, 160, 310, 332, 365, 713, 966
AluI	AGCT	7 cut(s)	44, 160, 310, 332, 365, 713, 966
Alw21I	GWGCWC	2 cut(s)	418, 715
AlwNI	CAGNNNCTG	2 cut(s)	218, 1253
AoxI	GGCC	5 cut(s)	8, 14, 637, 969, 1250
ApeKI	GCWGC	1 cut(s)	332
ApoI	RAATTY	3 cut(s)	535, 1114, 1196
AspLEI	GCGC	1 cut(s)	1161
AspS9I	GGNCC	6 cut(s)	14, 550, 743, 751, 935, 1250
AsuHPI	GGTGA	2 cut(s)	1026, 1136
AsuII	TTCGAA	1 cut(s)	726
AvaII	GGWCC	4 cut(s)	550, 743, 751, 935
AxyI	CCTNAGG	1 cut(s)	747
BaeGI	GKGCMC	1 cut(s)	296
BalI	TGGCCA	2 cut(s)	639, 971
BanI	GGYRCC	1 cut(s)	1165
BanII	GRGCYC	1 cut(s)	715
Bbv12I	GWGCWC	2 cut(s)	418, 715
BbvI	GCAGC	1 cut(s)	319
BccI	CCATC	3 cut(s)	1004, 1045, 1184
BceAI	ACGGC	1 cut(s)	582
BciT130I	CCWGG	3 cut(s)	12, 737, 1254
BciVI	GTATCC	1 cut(s)	705
BfaI	CTAG	3 cut(s)	441, 771, 902
BfmI	CTRYAG	1 cut(s)	1245
BfuI	GTATCC	1 cut(s)	705
BisI	GCNGC	3 cut(s)	317, 333, 568
BlsI	GCNGC	3 cut(s)	318, 334, 569
Bme1390I	CCNGG	3 cut(s)	12, 737, 1254
Bme18I	GGWCC	4 cut(s)	550, 743, 751, 935
BmgT120I	GGNCC	6 cut(s)	14, 550, 743, 751, 935, 1250
BmiI	GGNNCC	6 cut(s)	124, 552, 753, 816, 936, 1167
BmrFI	CCNGG	3 cut(s)	12, 737, 1254
BmrI	ACTGGG	1 cut(s)	540
BmsI	GCATC	1 cut(s)	579
BmuI	ACTGGG	1 cut(s)	540
Bpu14I	TTCGAA	1 cut(s)	726
BpuEI	CTTGAG	1 cut(s)	990
Bsa29I	ATCGAT	1 cut(s)	1040
BsaHI	GRCGYC	1 cut(s)	472
BsaJI	CCNNGG	4 cut(s)	5, 11, 392, 675
BsaWI	WCCGGW	1 cut(s)	302
BsaXI	ACNNNNNCTCC	2 cut(s)	821, 851
Bsc4I	CCNNNNNNNGG	4 cut(s)	11, 74, 343, 531
Bse1I	ACTGG	4 cut(s)	356, 535, 646, 972
Bse21I	CCTNAGG	1 cut(s)	747
Bse3DI	GCAATG	1 cut(s)	1186
BseBI	CCWGG	3 cut(s)	12, 737, 1254
BseCI	ATCGAT	1 cut(s)	1040
BseDI	CCNNGG	4 cut(s)	5, 11, 392, 675
BseGI	GGATG	1 cut(s)	1195
BseLI	CCNNNNNNNGG	4 cut(s)	11, 74, 343, 531
BseMI	GCAATG	1 cut(s)	1186
BseMII	CTCAG	3 cut(s)	210, 491, 761
BseNI	ACTGG	4 cut(s)	356, 535, 646, 972
BseRI	GAGGAG	1 cut(s)	829
BseSI	GKGCMC	1 cut(s)	296
BseXI	GCAGC	1 cut(s)	319
BsgI	GTGCAG	1 cut(s)	525
Bsh1236I	CGCG	1 cut(s)	621
BshFI	GGCC	5 cut(s)	10, 16, 639, 971, 1252
BshNI	GGYRCC	1 cut(s)	1165
BshVI	ATCGAT	1 cut(s)	1040
BsiHKAI	GWGCWC	2 cut(s)	418, 715
BsiSI	CCGG	2 cut(s)	280, 303
BslFI	GGGAC	3 cut(s)	260, 536, 737
BslI	CCNNNNNNNGG	4 cut(s)	11, 74, 343, 531
BsmFI	GGGAC	3 cut(s)	260, 536, 737
BsmI	GAATGC	1 cut(s)	351
BsnI	GGCC	5 cut(s)	10, 16, 639, 971, 1252
Bsp119I	TTCGAA	1 cut(s)	726
Bsp1286I	GDGCHC	3 cut(s)	296, 418, 715
Bsp143I	GATC	2 cut(s)	1084, 1237
BspACI	CCGC	4 cut(s)	317, 493, 568, 812
BspANI	GGCC	5 cut(s)	10, 16, 639, 971, 1252
BspCNI	CTCAG	3 cut(s)	211, 490, 760
BspDI	ATCGAT	1 cut(s)	1040
BspFNI	CGCG	1 cut(s)	621
BspLI	GGNNCC	6 cut(s)	124, 552, 753, 816, 936, 1167
BspT104I	TTCGAA	1 cut(s)	726
BspT107I	GGYRCC	1 cut(s)	1165
BsrBI	CCGCTC	1 cut(s)	495
BsrDI	GCAATG	1 cut(s)	1186
BsrI	ACTGG	4 cut(s)	356, 535, 646, 972
BssECI	CCNNGG	4 cut(s)	5, 11, 392, 675
BssMI	GATC	2 cut(s)	1084, 1237
BssNI	GRCGYC	1 cut(s)	472
BssT1I	CCWWGG	3 cut(s)	5, 392, 675
Bst2UI	CCWGG	3 cut(s)	12, 737, 1254
Bst4CI	ACNGT	2 cut(s)	386, 1150
Bst6I	CTCTTC	2 cut(s)	723, 1179
BstACI	GRCGYC	1 cut(s)	472
BstBI	TTCGAA	1 cut(s)	726
BstC8I	GCNNGC	3 cut(s)	42, 637, 1205
BstDEI	CTNAG	5 cut(s)	132, 219, 477, 747, 822
BstF5I	GGATG	1 cut(s)	1195
BstFNI	CGCG	1 cut(s)	621
BstHHI	GCGC	1 cut(s)	1161
BstKTI	GATC	2 cut(s)	1087, 1240
BstMBI	GATC	2 cut(s)	1084, 1237
BstMWI	GCNNNNNNNGC	4 cut(s)	46, 157, 316, 823
BstNI	CCWGG	3 cut(s)	12, 737, 1254
BstSCI	CCNGG	3 cut(s)	10, 735, 1252
BstSFI	CTRYAG	1 cut(s)	1245
BstSLI	GKGCMC	1 cut(s)	296
BstUI	CGCG	1 cut(s)	621
BstV1I	GCAGC	1 cut(s)	319
Bsu15I	ATCGAT	1 cut(s)	1040
Bsu36I	CCTNAGG	1 cut(s)	747
BsuI	GTATCC	1 cut(s)	705
BsuRI	GGCC	5 cut(s)	10, 16, 639, 971, 1252
BsuTUI	ATCGAT	1 cut(s)	1040
BtsCI	GGATG	1 cut(s)	1195
BtsIMutI	CAGTG	4 cut(s)	115, 294, 696, 979
Cac8I	GCNNGC	3 cut(s)	42, 637, 1205
CaiI	CAGNNNCTG	2 cut(s)	218, 1253
CfoI	GCGC	1 cut(s)	1161
Cfr13I	GGNCC	6 cut(s)	14, 550, 743, 751, 935, 1250
ClaI	ATCGAT	1 cut(s)	1040
CseI	GACGC	2 cut(s)	269, 480
Csp6I	GTAC	1 cut(s)	223
CviAII	CATG	5 cut(s)	70, 119, 226, 890, 951
CviQI	GTAC	1 cut(s)	223
DdeI	CTNAG	5 cut(s)	132, 219, 477, 747, 822
DpnI	GATC	2 cut(s)	1086, 1239
DpnII	GATC	2 cut(s)	1084, 1237
DraI	TTTAAA	1 cut(s)	178
EaeI	YGGCCR	2 cut(s)	637, 969
Eam1104I	CTCTTC	2 cut(s)	723, 1179
EarI	CTCTTC	2 cut(s)	723, 1179
Ecl136II	GAGCTC	1 cut(s)	713
Eco130I	CCWWGG	3 cut(s)	5, 392, 675
Eco24I	GRGCYC	1 cut(s)	715
Eco47I	GGWCC	4 cut(s)	550, 743, 751, 935
Eco53kI	GAGCTC	1 cut(s)	713
Eco81I	CCTNAGG	1 cut(s)	747
EcoICRI	GAGCTC	1 cut(s)	713
EcoO109I	RGGNCCY	4 cut(s)	743, 751, 935, 1250
EcoRI	GAATTC	2 cut(s)	535, 1114
EcoRII	CCWGG	3 cut(s)	10, 735, 1252
EcoT14I	CCWWGG	3 cut(s)	5, 392, 675
EcoT38I	GRGCYC	1 cut(s)	715
ErhI	CCWWGG	3 cut(s)	5, 392, 675
FaeI	CATG	5 cut(s)	73, 122, 229, 893, 954
FalI	AAGNNNNNCTT	2 cut(s)	321, 353
FaqI	GGGAC	3 cut(s)	260, 536, 737
FatI	CATG	5 cut(s)	69, 118, 225, 889, 950
Fnu4HI	GCNGC	3 cut(s)	317, 333, 568
FokI	GGATG	1 cut(s)	1202
FriOI	GRGCYC	1 cut(s)	715
Fsp4HI	GCNGC	3 cut(s)	317, 333, 568
FspBI	CTAG	3 cut(s)	441, 771, 902
GlaI	GCGC	1 cut(s)	1160
GluI	GCNGC	3 cut(s)	317, 333, 568
HaeIII	GGCC	5 cut(s)	10, 16, 639, 971, 1252
HapII	CCGG	2 cut(s)	280, 303
HgaI	GACGC	2 cut(s)	269, 480
HhaI	GCGC	1 cut(s)	1161
Hin1I	GRCGYC	1 cut(s)	472
Hin1II	CATG	5 cut(s)	73, 122, 229, 893, 954
Hin6I	GCGC	1 cut(s)	1159
HinP1I	GCGC	1 cut(s)	1159
HincII	GTYRAC	3 cut(s)	268, 651, 663
HindII	GTYRAC	3 cut(s)	268, 651, 663
HindIII	AAGCTT	1 cut(s)	964
HinfI	GANTC	5 cut(s)	229, 557, 625, 870, 1094
HpaI	GTTAAC	2 cut(s)	268, 651
HpaII	CCGG	2 cut(s)	280, 303
HphI	GGTGA	2 cut(s)	1026, 1136
Hpy166II	GTNNAC	4 cut(s)	268, 651, 663, 1098
Hpy188I	TCNGA	4 cut(s)	214, 603, 1120, 1134
Hpy188III	TCNNGA	4 cut(s)	233, 369, 411, 1007
Hpy8I	GTNNAC	4 cut(s)	268, 651, 663, 1098
Hpy99I	CGWCG	1 cut(s)	603
HpyAV	CCTTC	2 cut(s)	438, 1121
HpyCH4III	ACNGT	2 cut(s)	386, 1150
HpyCH4V	TGCA	4 cut(s)	351, 518, 542, 946
HpyF10VI	GCNNNNNNNGC	4 cut(s)	46, 157, 316, 823
HpyF3I	CTNAG	5 cut(s)	132, 219, 477, 747, 822
Hsp92I	GRCGYC	1 cut(s)	472
Hsp92II	CATG	5 cut(s)	73, 122, 229, 893, 954
HspAI	GCGC	1 cut(s)	1159
KspAI	GTTAAC	2 cut(s)	268, 651
Kzo9I	GATC	2 cut(s)	1084, 1237
LmnI	GCTCC	4 cut(s)	128, 439, 710, 814
Lsp1109I	GCAGC	1 cut(s)	319
LweI	GCATC	1 cut(s)	579
MaeI	CTAG	3 cut(s)	441, 771, 902
MaeIII	GTNAC	4 cut(s)	127, 799, 861, 1032
MalI	GATC	2 cut(s)	1086, 1239
MbiI	CCGCTC	1 cut(s)	495
MboI	GATC	2 cut(s)	1084, 1237
MboII	GAAGA	5 cut(s)	148, 620, 740, 995, 1196
MfeI	CAATTG	2 cut(s)	506, 795
MhlI	GDGCHC	3 cut(s)	296, 418, 715
MlsI	TGGCCA	2 cut(s)	639, 971
MluNI	TGGCCA	2 cut(s)	639, 971
MlyI	GAGTC	1 cut(s)	1103
MmeI	TCCRAC	2 cut(s)	581, 1112
Mox20I	TGGCCA	2 cut(s)	639, 971
MscI	TGGCCA	2 cut(s)	639, 971
MseI	TTAA	5 cut(s)	177, 267, 339, 650, 1022
Msp20I	TGGCCA	2 cut(s)	639, 971
MspI	CCGG	2 cut(s)	280, 303
MspR9I	CCNGG	3 cut(s)	12, 737, 1254
MunI	CAATTG	2 cut(s)	506, 795
Mva1269I	GAATGC	1 cut(s)	351
MvaI	CCWGG	3 cut(s)	12, 737, 1254
MvnI	CGCG	1 cut(s)	621
MwoI	GCNNNNNNNGC	4 cut(s)	46, 157, 316, 823
NdeII	GATC	2 cut(s)	1084, 1237
NlaIII	CATG	5 cut(s)	73, 122, 229, 893, 954
NlaIV	GGNNCC	6 cut(s)	124, 552, 753, 816, 936, 1167
NmuCI	GTSAC	2 cut(s)	861, 1032
NspV	TTCGAA	1 cut(s)	726
PctI	GAATGC	1 cut(s)	351
PfeI	GAWTC	4 cut(s)	229, 557, 625, 870
PkrI	GCNGC	3 cut(s)	318, 334, 569
PleI	GAGTC	1 cut(s)	1102
PpsI	GAGTC	1 cut(s)	1102
PpuMI	RGGWCCY	3 cut(s)	743, 751, 935
Psp124BI	GAGCTC	1 cut(s)	715
Psp5II	RGGWCCY	3 cut(s)	743, 751, 935
Psp6I	CCWGG	3 cut(s)	10, 735, 1252
PspGI	CCWGG	3 cut(s)	10, 735, 1252
PspN4I	GGNNCC	6 cut(s)	124, 552, 753, 816, 936, 1167
PspPI	GGNCC	6 cut(s)	14, 550, 743, 751, 935, 1250
PspPPI	RGGWCCY	3 cut(s)	743, 751, 935
PstNI	CAGNNNCTG	2 cut(s)	218, 1253
RsaI	GTAC	1 cut(s)	224
RsaNI	GTAC	1 cut(s)	223
SacI	GAGCTC	1 cut(s)	715
SaqAI	TTAA	5 cut(s)	177, 267, 339, 650, 1022
SatI	GCNGC	3 cut(s)	317, 333, 568
Sau3AI	GATC	2 cut(s)	1084, 1237
Sau96I	GGNCC	6 cut(s)	14, 550, 743, 751, 935, 1250
SchI	GAGTC	1 cut(s)	1103
ScrFI	CCNGG	3 cut(s)	12, 737, 1254
SduI	GDGCHC	3 cut(s)	296, 418, 715
SfaNI	GCATC	1 cut(s)	579
SfcI	CTRYAG	1 cut(s)	1245
SfuI	TTCGAA	1 cut(s)	726
SinI	GGWCC	4 cut(s)	550, 743, 751, 935
SmlI	CTYRAG	1 cut(s)	1005
SmoI	CTYRAG	1 cut(s)	1005
SsiI	CCGC	4 cut(s)	317, 493, 568, 812
SspMI	CTAG	3 cut(s)	441, 771, 902
SstI	GAGCTC	1 cut(s)	715
StyD4I	CCNGG	3 cut(s)	10, 735, 1252
StyI	CCWWGG	3 cut(s)	5, 392, 675
TaaI	ACNGT	2 cut(s)	386, 1150
TaqI	TCGA	4 cut(s)	726, 806, 1040, 1240
TaqII	GACCGA	1 cut(s)	538
TatI	WGTACW	1 cut(s)	222
TauI	GCSGC	2 cut(s)	319, 570
TfiI	GAWTC	4 cut(s)	229, 557, 625, 870
Tru1I	TTAA	5 cut(s)	177, 267, 339, 650, 1022
Tru9I	TTAA	5 cut(s)	177, 267, 339, 650, 1022
TscAI	CASTG	4 cut(s)	115, 301, 696, 979
TseFI	GTSAC	2 cut(s)	861, 1032
TseI	GCWGC	1 cut(s)	332
Tsp45I	GTSAC	2 cut(s)	861, 1032
TspDTI	ATGAA	4 cut(s)	107, 242, 480, 1197
TspGWI	ACGGA	3 cut(s)	115, 923, 995
TspRI	CASTG	4 cut(s)	115, 301, 696, 979
VpaK11BI	GGWCC	4 cut(s)	550, 743, 751, 935
XapI	RAATTY	3 cut(s)	535, 1114, 1196
XcmI	CCANNNNNNNNNTGG	2 cut(s)	445, 673
XspI	CTAG	3 cut(s)	441, 771, 902

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.