RH2AG034700

No description available

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG034700.1

Sequence Viewer

Length: 1272 bp
ATGCCAAGGCCGGGTCCGAGGCCGTATGAGTGCGTCAGGCGGGCTTGGCATAGCGAGAGGCACCAACCCATGAGAGGCTCCATCATTCAGCAGATGTTCAGGGTCGTCAGTGAAGTTCATAGCTCCAAAACCAAGAACAACAAGGAGTGGCAGGAAAAGCTGCCCATGGTGGTTTTGAAAGCAGAGGAAATCATGTATTCCAAAGCCAATTCAGAGGCTGAGTACATGAATTCTGACACACTATGGGATAGAGCAAATGACGCCATTAACACAATTATTCGAAGAGATGAGGGCACTGAAACCCGGGACCTTTTGCCGCCGTGTGTTGAAGCTGCGCTTAATCTGGGTTGTGTTGCGGTAAGAGCTTCAAGAAGCCAACGCCACAGTAATCCAAGGAGTTACCTCATTCCGAGACCACAAGAACCCCCCTCTCCACCCACTAGGATTTTGGATAGACCATCTGATGAACGACGCCCTCCGTTTTCTCCTCCACATCACCCGGGACATCAATCAAACTTTGCAAGACCCTCAGCTGTGAGTTCTGCACATTTGGTCCCAGAAGCTCACAGTCACGCCAACCAAAGTAGTAACCTGACTAACCCTCGGCATTACCCATTTTCCCTTGAGAATGTTCCTGGTGGCCATAACCAGGTAACAACAATGTCAACCAACAACCAATTGAACTTAGGTTCAGTATATCCATTGTATTATGGATCTCACTATCAAACTGAAGCATCCCAGTTAGGTCCTCAGGTCCCAGAAAATGCACATTCTAGGACTATATATGTTGGTACACCAGTTACATCAATTCAGGAGCCTACCAAGCAGAACATGTTCACCTGTCAAAGGGCTGAAAATCTGTCACACAGACTTCCCCAAGTAGATGTCATGGACATCCAGGAGAAGCCACGAGAAGCAGAATATGATTTATCTTTGAGGTTGGGTCCTGTCTCACATTTATGTACTGATAGAAGCTTGGCCAGTGAAACGGAAGATATTGGTTCAAGTAATTCTCAAGAGGGCGGAAAGTTCAACGATTATTCACCATCTATAAGTAAGGAGTTCTGTTTCTTTCCTACTAGGACTGCTTATGATCCCTCTGAGTCCACTTCAAGCATGTGGAATTCAGAGGGTGAAGATCGGAGTTTGGAGCCAACTTTAAAGAAGCGCAAAGCAACTTTTAGAAACAATGAAGAGGATGGGCAATTTTTCTGCCAGCCACCTGGCCAGCCCAACAAGTTTCCTGGTCGATTTTCAGGGCCAGGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

423

Amino Acids

47.76

Weight (kDa)

6.77

Isoelectric Point (pI)

63.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 60
AciI CCGC 4 cut(s) 40, 317, 356, 1023
AclWI GGATC 2 cut(s) 721, 1088
AcoI YGGCCR 3 cut(s) 640, 978, 1225
AcsI RAATTY 2 cut(s) 229, 1123
AcuI CTGAAG 1 cut(s) 750
AcyI GRCGYC 2 cut(s) 261, 472
AfaI GTAC 3 cut(s) 224, 793, 964
AfiI CCNNNNNNNGG 4 cut(s) 11, 74, 649, 846
AflIII ACRYGT 1 cut(s) 831
AgsI TTSAA 7 cut(s) 178, 329, 369, 682, 1005, 1033, 1113
AjnI CCWGG 6 cut(s) 634, 648, 897, 1222, 1243, 1261
AluBI AGCT 7 cut(s) 123, 160, 332, 365, 533, 563, 975
AluI AGCT 7 cut(s) 123, 160, 332, 365, 533, 563, 975
Alw26I GTCTC 2 cut(s) 406, 955
AlwI GGATC 2 cut(s) 721, 1088
AlwNI CAGNNNCTG 1 cut(s) 218
Ama87I CYCGRG 2 cut(s) 303, 499
AoxI GGCC 6 cut(s) 8, 20, 640, 978, 1225, 1259
ApeKI GCWGC 2 cut(s) 160, 332
ApoI RAATTY 2 cut(s) 229, 1123
Asp700I GAANNNNTTC 1 cut(s) 833
AspLEI GCGC 2 cut(s) 337, 1170
AspS9I GGNCC 7 cut(s) 14, 307, 553, 746, 754, 944, 1259
AsuC2I CCSGG 5 cut(s) 12, 304, 305, 500, 501
AsuHPI GGTGA 4 cut(s) 488, 829, 1035, 1145
AsuII TTCGAA 1 cut(s) 280
AvaI CYCGRG 2 cut(s) 303, 499
AvaII GGWCC 6 cut(s) 14, 307, 553, 746, 754, 944
AxyI CCTNAGG 1 cut(s) 750
BaeGI GKGCMC 1 cut(s) 296
BaeI ACNNNNGTAYC 2 cut(s) 783, 816
BalI TGGCCA 3 cut(s) 642, 980, 1227
BanI GGYRCC 1 cut(s) 60
BauI CACGAG 1 cut(s) 909
BbvCI CCTCAGC 1 cut(s) 529
BbvI GCAGC 2 cut(s) 147, 319
BccI CCATC 4 cut(s) 89, 466, 1054, 1193
BceAI ACGGC 2 cut(s) 7, 304
BciT130I CCWGG 6 cut(s) 636, 650, 899, 1224, 1245, 1263
BcnI CCSGG 5 cut(s) 12, 304, 305, 500, 501
BcoDI GTCTC 2 cut(s) 406, 955
BfaI CTAG 3 cut(s) 441, 774, 1080
BisI GCNGC 3 cut(s) 161, 317, 333
BlsI GCNGC 3 cut(s) 162, 318, 334
Bme18I GGWCC 6 cut(s) 14, 307, 553, 746, 754, 944
BmeT110I CYCGRG 2 cut(s) 303, 499
BmgT120I GGNCC 7 cut(s) 14, 307, 553, 746, 754, 944, 1259
BmiI GGNNCC 9 cut(s) 15, 62, 79, 308, 555, 756, 816, 945, 1152
BmrI ACTGGG 1 cut(s) 733
BmsI GCATC 1 cut(s) 743
BmuI ACTGGG 1 cut(s) 733
Bpu10I CCTNAGC 1 cut(s) 529
Bpu14I TTCGAA 1 cut(s) 280
BpuEI CTTGAG 2 cut(s) 644, 999
BpuMI CCSGG 5 cut(s) 12, 304, 305, 500, 501
BsaHI GRCGYC 2 cut(s) 261, 472
BsaI GGTCTC 1 cut(s) 406
BsaJI CCNNGG 7 cut(s) 5, 17, 165, 303, 392, 499, 602
Bsc4I CCNNNNNNNGG 4 cut(s) 11, 74, 649, 846
Bse1I ACTGG 3 cut(s) 739, 797, 981
Bse21I CCTNAGG 1 cut(s) 750
BseBI CCWGG 6 cut(s) 636, 650, 899, 1224, 1245, 1263
BseDI CCNNGG 7 cut(s) 5, 17, 165, 303, 392, 499, 602
BseGI GGATG 3 cut(s) 734, 894, 1204
BseLI CCNNNNNNNGG 4 cut(s) 11, 74, 649, 846
BseMII CTCAG 4 cut(s) 210, 543, 764, 1092
BseNI ACTGG 3 cut(s) 739, 797, 981
BseRI GAGGAG 1 cut(s) 477
BseSI GKGCMC 1 cut(s) 296
BseXI GCAGC 2 cut(s) 147, 319
BsgI GTGCAG 1 cut(s) 528
BshFI GGCC 6 cut(s) 10, 22, 642, 980, 1227, 1261
BshNI GGYRCC 1 cut(s) 60
BsiHKCI CYCGRG 2 cut(s) 303, 499
BsiSI CCGG 3 cut(s) 11, 304, 500
BslFI GGGAC 4 cut(s) 320, 516, 539, 740
BslI CCNNNNNNNGG 4 cut(s) 11, 74, 649, 846
BsmAI GTCTC 2 cut(s) 406, 955
BsmFI GGGAC 4 cut(s) 320, 516, 539, 740
BsnI GGCC 6 cut(s) 10, 22, 642, 980, 1227, 1261
Bso31I GGTCTC 1 cut(s) 406
BsoBI CYCGRG 2 cut(s) 303, 499
Bsp119I TTCGAA 1 cut(s) 280
Bsp1286I GDGCHC 1 cut(s) 296
Bsp143I GATC 3 cut(s) 713, 1093, 1138
Bsp19I CCATGG 1 cut(s) 165
BspACI CCGC 4 cut(s) 40, 317, 356, 1023
BspANI GGCC 6 cut(s) 10, 22, 642, 980, 1227, 1261
BspCNI CTCAG 4 cut(s) 211, 542, 763, 1093
BspLI GGNNCC 9 cut(s) 15, 62, 79, 308, 555, 756, 816, 945, 1152
BspPI GGATC 2 cut(s) 721, 1088
BspT104I TTCGAA 1 cut(s) 280
BspT107I GGYRCC 1 cut(s) 60
BspTNI GGTCTC 1 cut(s) 406
BsrI ACTGG 3 cut(s) 739, 797, 981
BssECI CCNNGG 7 cut(s) 5, 17, 165, 303, 392, 499, 602
BssMI GATC 3 cut(s) 713, 1093, 1138
BssNI GRCGYC 2 cut(s) 261, 472
BssSI CACGAG 1 cut(s) 909
BssT1I CCWWGG 3 cut(s) 5, 165, 392
Bst2BI CACGAG 1 cut(s) 909
Bst2UI CCWGG 6 cut(s) 636, 650, 899, 1224, 1245, 1263
Bst4CI ACNGT 2 cut(s) 386, 569
Bst6I CTCTTC 2 cut(s) 277, 1188
BstACI GRCGYC 2 cut(s) 261, 472
BstBI TTCGAA 1 cut(s) 280
BstC8I GCNNGC 3 cut(s) 42, 1217, 1229
BstDEI CTNAG 5 cut(s) 219, 529, 685, 750, 1101
BstDSI CCRYGG 1 cut(s) 165
BstENI CCTNNNNNAGG 1 cut(s) 844
BstF5I GGATG 3 cut(s) 734, 894, 1204
BstHHI GCGC 2 cut(s) 337, 1170
BstKTI GATC 3 cut(s) 716, 1096, 1141
BstMAI GTCTC 2 cut(s) 406, 955
BstMBI GATC 3 cut(s) 713, 1093, 1138
BstMWI GCNNNNNNNGC 5 cut(s) 46, 157, 260, 362, 823
BstNI CCWGG 6 cut(s) 636, 650, 899, 1224, 1245, 1263
BstNSI RCATGY 2 cut(s) 835, 1120
BstSLI GKGCMC 1 cut(s) 296
BstV1I GCAGC 2 cut(s) 147, 319
BstX2I RGATCY 1 cut(s) 713
BstXI CCANNNNNNTGG 1 cut(s) 1223
BstYI RGATCY 1 cut(s) 713
Bsu36I CCTNAGG 1 cut(s) 750
BsuRI GGCC 6 cut(s) 10, 22, 642, 980, 1227, 1261
BtgI CCRYGG 1 cut(s) 165
BtsCI GGATG 3 cut(s) 734, 894, 1204
BtsIMutI CAGTG 3 cut(s) 115, 294, 988
Cac8I GCNNGC 3 cut(s) 42, 1217, 1229
CaiI CAGNNNCTG 1 cut(s) 218
CfoI GCGC 2 cut(s) 337, 1170
Cfr13I GGNCC 7 cut(s) 14, 307, 553, 746, 754, 944, 1259
Cfr9I CCCGGG 2 cut(s) 303, 499
CseI GACGC 3 cut(s) 22, 269, 480
CsiI ACCWGGT 1 cut(s) 648
Csp6I GTAC 3 cut(s) 223, 792, 963
CviAII CATG 7 cut(s) 70, 166, 193, 226, 832, 889, 1117
CviQI GTAC 3 cut(s) 223, 792, 963
DdeI CTNAG 5 cut(s) 219, 529, 685, 750, 1101
DpnI GATC 3 cut(s) 715, 1095, 1140
DpnII GATC 3 cut(s) 713, 1093, 1138
DraI TTTAAA 1 cut(s) 1161
EaeI YGGCCR 3 cut(s) 640, 978, 1225
Eam1104I CTCTTC 2 cut(s) 277, 1188
EarI CTCTTC 2 cut(s) 277, 1188
EciI GGCGGA 1 cut(s) 1038
Eco130I CCWWGG 3 cut(s) 5, 165, 392
Eco31I GGTCTC 1 cut(s) 406
Eco47I GGWCC 6 cut(s) 14, 307, 553, 746, 754, 944
Eco57I CTGAAG 1 cut(s) 750
Eco81I CCTNAGG 1 cut(s) 750
Eco88I CYCGRG 2 cut(s) 303, 499
EcoNI CCTNNNNNAGG 1 cut(s) 844
EcoO109I RGGNCCY 4 cut(s) 307, 746, 754, 944
EcoRI GAATTC 2 cut(s) 229, 1123
EcoRII CCWGG 6 cut(s) 634, 648, 897, 1222, 1243, 1261
EcoT14I CCWWGG 3 cut(s) 5, 165, 392
ErhI CCWWGG 3 cut(s) 5, 165, 392
FaeI CATG 7 cut(s) 73, 169, 196, 229, 835, 892, 1120
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FaqI GGGAC 4 cut(s) 320, 516, 539, 740
FatI CATG 7 cut(s) 69, 165, 192, 225, 831, 888, 1116
FauI CCCGC 1 cut(s) 33
Fnu4HI GCNGC 3 cut(s) 161, 317, 333
FokI GGATG 3 cut(s) 721, 881, 1211
Fsp4HI GCNGC 3 cut(s) 161, 317, 333
FspBI CTAG 3 cut(s) 441, 774, 1080
GlaI GCGC 2 cut(s) 336, 1169
GluI GCNGC 3 cut(s) 161, 317, 333
HaeIII GGCC 6 cut(s) 10, 22, 642, 980, 1227, 1261
HapII CCGG 3 cut(s) 11, 304, 500
HgaI GACGC 3 cut(s) 22, 269, 480
HhaI GCGC 2 cut(s) 337, 1170
Hin1I GRCGYC 2 cut(s) 261, 472
Hin1II CATG 7 cut(s) 73, 169, 196, 229, 835, 892, 1120
Hin6I GCGC 2 cut(s) 335, 1168
HinP1I GCGC 2 cut(s) 335, 1168
HincII GTYRAC 1 cut(s) 666
HindII GTYRAC 1 cut(s) 666
HindIII AAGCTT 1 cut(s) 973
HinfI GANTC 1 cut(s) 1103
HpaII CCGG 3 cut(s) 11, 304, 500
HphI GGTGA 4 cut(s) 488, 829, 1035, 1145
Hpy166II GTNNAC 4 cut(s) 666, 794, 837, 1107
Hpy188I TCNGA 8 cut(s) 18, 214, 235, 411, 463, 1102, 1129, 1143
Hpy188III TCNNGA 3 cut(s) 369, 812, 1016
Hpy8I GTNNAC 4 cut(s) 666, 794, 837, 1107
Hpy99I CGWCG 1 cut(s) 474
HpyCH4III ACNGT 2 cut(s) 386, 569
HpyCH4V TGCA 3 cut(s) 521, 545, 767
HpyF10VI GCNNNNNNNGC 5 cut(s) 46, 157, 260, 362, 823
HpyF3I CTNAG 5 cut(s) 219, 529, 685, 750, 1101
Hsp92I GRCGYC 2 cut(s) 261, 472
Hsp92II CATG 7 cut(s) 73, 169, 196, 229, 835, 892, 1120
HspAI GCGC 2 cut(s) 335, 1168
Kzo9I GATC 3 cut(s) 713, 1093, 1138
LmnI GCTCC 4 cut(s) 83, 128, 814, 1150
Lsp1109I GCAGC 2 cut(s) 147, 319
LweI GCATC 1 cut(s) 743
MabI ACCWGGT 1 cut(s) 648
MaeI CTAG 3 cut(s) 441, 774, 1080
MaeIII GTNAC 6 cut(s) 398, 569, 587, 652, 799, 861
MalI GATC 3 cut(s) 715, 1095, 1140
MboI GATC 3 cut(s) 713, 1093, 1138
MboII GAAGA 4 cut(s) 294, 1004, 1148, 1205
MfeI CAATTG 1 cut(s) 677
MflI RGATCY 1 cut(s) 713
MhlI GDGCHC 1 cut(s) 296
MlsI TGGCCA 3 cut(s) 642, 980, 1227
MluCI AATT 8 cut(s) 208, 229, 273, 677, 807, 1009, 1123, 1205
MluNI TGGCCA 3 cut(s) 642, 980, 1227
MlyI GAGTC 1 cut(s) 1112
Mox20I TGGCCA 3 cut(s) 642, 980, 1227
MroXI GAANNNNTTC 1 cut(s) 833
MscI TGGCCA 3 cut(s) 642, 980, 1227
MseI TTAA 3 cut(s) 267, 339, 1160
MslI CAYNNNNRTG 1 cut(s) 958
Msp20I TGGCCA 3 cut(s) 642, 980, 1227
MspA1I CMGCKG 1 cut(s) 533
MspI CCGG 3 cut(s) 11, 304, 500
MunI CAATTG 1 cut(s) 677
MvaI CCWGG 6 cut(s) 636, 650, 899, 1224, 1245, 1263
MwoI GCNNNNNNNGC 5 cut(s) 46, 157, 260, 362, 823
NciI CCSGG 5 cut(s) 12, 304, 305, 500, 501
NcoI CCATGG 1 cut(s) 165
NdeII GATC 3 cut(s) 713, 1093, 1138
NlaIII CATG 7 cut(s) 73, 169, 196, 229, 835, 892, 1120
NlaIV GGNNCC 9 cut(s) 15, 62, 79, 308, 555, 756, 816, 945, 1152
NmeAIII GCCGAG 1 cut(s) 583
NmuCI GTSAC 2 cut(s) 569, 861
NspI RCATGY 2 cut(s) 835, 1120
NspV TTCGAA 1 cut(s) 280
PciI ACATGT 1 cut(s) 831
PdmI GAANNNNTTC 1 cut(s) 833
PfoI TCCNGGA 1 cut(s) 897
PkrI GCNGC 3 cut(s) 162, 318, 334
PleI GAGTC 1 cut(s) 1111
PpsI GAGTC 1 cut(s) 1111
PpuMI RGGWCCY 4 cut(s) 307, 746, 754, 944
PscI ACATGT 1 cut(s) 831
Psp5II RGGWCCY 4 cut(s) 307, 746, 754, 944
Psp6I CCWGG 6 cut(s) 634, 648, 897, 1222, 1243, 1261
PspGI CCWGG 6 cut(s) 634, 648, 897, 1222, 1243, 1261
PspN4I GGNNCC 9 cut(s) 15, 62, 79, 308, 555, 756, 816, 945, 1152
PspPI GGNCC 7 cut(s) 14, 307, 553, 746, 754, 944, 1259
PspPPI RGGWCCY 4 cut(s) 307, 746, 754, 944
PstNI CAGNNNCTG 1 cut(s) 218
PsuI RGATCY 1 cut(s) 713
PvuII CAGCTG 1 cut(s) 533
RsaI GTAC 3 cut(s) 224, 793, 964
RsaNI GTAC 3 cut(s) 223, 792, 963
RseI CAYNNNNRTG 1 cut(s) 958
SaqAI TTAA 3 cut(s) 267, 339, 1160
SatI GCNGC 3 cut(s) 161, 317, 333
Sau3AI GATC 3 cut(s) 713, 1093, 1138
Sau96I GGNCC 7 cut(s) 14, 307, 553, 746, 754, 944, 1259
SchI GAGTC 1 cut(s) 1112
SduI GDGCHC 1 cut(s) 296
SexAI ACCWGGT 1 cut(s) 648
SfaNI GCATC 1 cut(s) 743
SfuI TTCGAA 1 cut(s) 280
SinI GGWCC 6 cut(s) 14, 307, 553, 746, 754, 944
SmaI CCCGGG 2 cut(s) 305, 501
SmiMI CAYNNNNRTG 1 cut(s) 958
SmlI CTYRAG 2 cut(s) 623, 1014
SmoI CTYRAG 2 cut(s) 623, 1014
Sse9I AATT 8 cut(s) 208, 229, 273, 677, 807, 1009, 1123, 1205
SsiI CCGC 4 cut(s) 40, 317, 356, 1023
SspMI CTAG 3 cut(s) 441, 774, 1080
StyI CCWWGG 3 cut(s) 5, 165, 392
TaaI ACNGT 2 cut(s) 386, 569
TaqI TCGA 2 cut(s) 280, 1249
TasI AATT 8 cut(s) 208, 229, 273, 677, 807, 1009, 1123, 1205
TatI WGTACW 2 cut(s) 222, 962
TauI GCSGC 1 cut(s) 319
Tru1I TTAA 3 cut(s) 267, 339, 1160
Tru9I TTAA 3 cut(s) 267, 339, 1160
TscAI CASTG 3 cut(s) 115, 301, 988
TseFI GTSAC 2 cut(s) 569, 861
TseI GCWGC 2 cut(s) 160, 332
Tsp45I GTSAC 2 cut(s) 569, 861
TspDTI ATGAA 4 cut(s) 107, 242, 480, 1206
TspGWI ACGGA 2 cut(s) 468, 1004
TspMI CCCGGG 2 cut(s) 303, 499
TspRI CASTG 3 cut(s) 115, 301, 988
VpaK11BI GGWCC 6 cut(s) 14, 307, 553, 746, 754, 944
XagI CCTNNNNNAGG 1 cut(s) 844
XapI RAATTY 2 cut(s) 229, 1123
XceI RCATGY 2 cut(s) 835, 1120
XcmI CCANNNNNNNNNTGG 1 cut(s) 445
XmaI CCCGGG 2 cut(s) 303, 499
XmnI GAANNNNTTC 1 cut(s) 833
XspI CTAG 3 cut(s) 441, 774, 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.