pycom15g15150

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
10517645 .. 10519272
1628 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g15150.1

Sequence Viewer

Length: 1254 bp
ATGCCTAGGCCGGGCCCGAGACCGTATGAGTGTGTCCGGCGAGCTTGGCATAGCGATAGGCACCAACCCATGAGAGGTTCCATCATTCAGCAGATTTTCAGGGTCGTCAATGAGGTTCACAGTTCTGTAACGAAGAAGAACAAGGAATGGCAGGAGAAGCTGCCTTTGGTGGTTTTCAGAGCAGAGGAAATTATGTATTCAAAAGCCAATTCTGAGGCTGAGTACATGAATCTTGACACGCTATGGGATAGAGCAAATGACGCCGTTAACACAATTATCCGGCGAGATGAGGGCACTGAAACCGGGGAGCTTTTGCCGCCGTGCGTTGAAGCTGCCCTTAATCTGGGTTGCACTCCAGTAAGAGCTTCGAGAAGCCAACGGAACAGTAATCCAAGGAGTTACCTCACTCCAAGAGCACAAGAGCCCGCTCCTATGCCTGCTAGGGTTTTGGATAAAGCTACTGATGAACGGCACCCTCAGTTTTCTCATCACTCTAGCAATTTATTGGACTTTGCAAAAGCCTCAAATGTGAACTCTGCACTTTTGGTCCCAGAATCTTACAGCCGCATGAGCCAGAGTACTAACCTCCCTAGCCCTCGGAATTACCCATTTTCACTTGAGAATGTTCCTGCTGGCCATAACCAGTTAGCAACAATGTCAACCAATAACCCCTCGAACTCGGGTTCAGTATATCCATTATATTACGGAACTCACCATCAACCTGAAGAGTTCACGGTCGGTCCTCAGGTCCCAGAAAGTACATATTCTAGGACCATACATGTCGGCACACCAATTGTTACATCAGTTATGGAACCTACCAAGCAGAACCTTTTCTCCTCTCAAGGTGCTGAAAATGTGTCACACAGATTCACAGAAGTCATGGACACCCAGGAGAAGCCACGGGAAATCGAATGTGATTTATCGTTGACGTTGGGTCCTGTTGTCCACCCATGTACTCGAAGAAGCTTGGCCAGTGGAATGGAAGATATTGGGTCGAGCAATTCTCAAGACGGGGGAAAGTTAAATGATTTTTCACCATTGAGAAGCAAGGAAATCTGTTTCTTTCCCACAAAGACTGCTTATGATCGCTTTGAGTCCACTATGTGGAATTCAGAGAGTGGTCGGAGTTCTGAGGCAACTGTAAGGAAGCGCAAGGCACCATTTAGTAGCAATGAGGAGGATAGGCAATATTGCTGGCAACCAGATGTTGTTCCCAACAGGTTCACTGGTCGAACTACAGGGCCTGGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

418

Amino Acids

46.92

Weight (kDa)

6.87

Isoelectric Point (pI)

63.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 60, 471, 1156
AccB7I CCANNNNNTGG 1 cut(s) 1104
AccBSI CCGCTC 1 cut(s) 428
AciI CCGC 3 cut(s) 317, 426, 565
AcoI YGGCCR 2 cut(s) 634, 969
AcsI RAATTY 1 cut(s) 1108
AcuI CTGAAG 1 cut(s) 744
AcyI GRCGYC 1 cut(s) 261
AdeI CACNNNGTG 1 cut(s) 1104
AfaI GTAC 4 cut(s) 224, 580, 760, 955
AfiI CCNNNNNNNGG 4 cut(s) 11, 74, 343, 1104
AflIII ACRYGT 1 cut(s) 778
AgsI TTSAA 2 cut(s) 201, 329
AhdI GACNNNNNGTC 1 cut(s) 933
AjnI CCWGG 2 cut(s) 888, 1243
AjuI GAANNNNNNNTTGG 2 cut(s) 149, 181
AloI GAACNNNNNNTCC 2 cut(s) 818, 850
AluBI AGCT 7 cut(s) 44, 160, 310, 332, 365, 458, 966
AluI AGCT 7 cut(s) 44, 160, 310, 332, 365, 458, 966
Alw21I GWGCWC 1 cut(s) 418
Alw26I GTCTC 1 cut(s) 13
AlwNI CAGNNNCTG 1 cut(s) 1244
Ama87I CYCGRG 2 cut(s) 16, 679
AoxI GGCC 5 cut(s) 8, 13, 634, 969, 1241
ApaI GGGCCC 1 cut(s) 17
ApeKI GCWGC 2 cut(s) 160, 332
ApoI RAATTY 1 cut(s) 1108
Asp700I GAANNNNTTC 1 cut(s) 830
AspA2I CCTAGG 1 cut(s) 5
AspLEI GCGC 1 cut(s) 1152
AspS9I GGNCC 8 cut(s) 13, 14, 547, 740, 748, 771, 935, 1241
AsuC2I CCSGG 2 cut(s) 12, 304
AsuHPI GGTGA 2 cut(s) 704, 1026
AvaI CYCGRG 2 cut(s) 16, 679
AvaII GGWCC 5 cut(s) 547, 740, 748, 771, 935
AvrII CCTAGG 1 cut(s) 5
AxyI CCTNAGG 1 cut(s) 744
BaeGI GKGCMC 2 cut(s) 17, 296
BalI TGGCCA 2 cut(s) 636, 971
BanI GGYRCC 3 cut(s) 60, 471, 1156
BanII GRGCYC 2 cut(s) 17, 426
Bbv12I GWGCWC 1 cut(s) 418
BbvI GCAGC 2 cut(s) 147, 319
BccI CCATC 2 cut(s) 89, 723
BceAI ACGGC 3 cut(s) 248, 304, 485
BciT130I CCWGG 2 cut(s) 890, 1245
BcnI CCSGG 2 cut(s) 12, 304
BcoDI GTCTC 1 cut(s) 13
BfaI CTAG 5 cut(s) 6, 441, 495, 591, 768
BfmI CTRYAG 1 cut(s) 1236
BisI GCNGC 4 cut(s) 161, 317, 333, 565
BlnI CCTAGG 1 cut(s) 5
BlsI GCNGC 4 cut(s) 162, 318, 334, 566
BmcAI AGTACT 1 cut(s) 580
Bme1390I CCNGG 4 cut(s) 12, 304, 890, 1245
Bme18I GGWCC 5 cut(s) 547, 740, 748, 771, 935
BmeRI GACNNNNNGTC 1 cut(s) 933
BmeT110I CYCGRG 2 cut(s) 16, 679
BmgT120I GGNCC 8 cut(s) 13, 14, 547, 740, 748, 771, 935, 1241
BmiI GGNNCC 9 cut(s) 15, 62, 79, 473, 549, 750, 813, 936, 1158
BmrFI CCNGG 4 cut(s) 12, 304, 890, 1245
BplI GAGNNNNNCTC 2 cut(s) 988, 1020
BpmI CTGGAG 1 cut(s) 339
BpuEI CTTGAG 3 cut(s) 638, 825, 990
BpuMI CCSGG 2 cut(s) 12, 304
BsaHI GRCGYC 1 cut(s) 261
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 6 cut(s) 5, 303, 392, 596, 888, 899
BsaXI ACNNNNNCTCC 2 cut(s) 818, 848
Bsc4I CCNNNNNNNGG 4 cut(s) 11, 74, 343, 1104
Bse1I ACTGG 4 cut(s) 356, 643, 972, 1231
Bse21I CCTNAGG 1 cut(s) 744
Bse3DI GCAATG 1 cut(s) 1177
BseBI CCWGG 2 cut(s) 890, 1245
BseDI CCNNGG 6 cut(s) 5, 303, 392, 596, 888, 899
BseLI CCNNNNNNNGG 4 cut(s) 11, 74, 343, 1104
BseMI GCAATG 1 cut(s) 1177
BseMII CTCAG 5 cut(s) 204, 210, 491, 758, 1122
BseNI ACTGG 4 cut(s) 356, 643, 972, 1231
BseRI GAGGAG 2 cut(s) 826, 1190
BseSI GKGCMC 2 cut(s) 17, 296
BseXI GCAGC 2 cut(s) 147, 319
BsgI GTGCAG 1 cut(s) 522
Bsh1285I CGRYCG 1 cut(s) 738
BshFI GGCC 5 cut(s) 10, 15, 636, 971, 1243
BshNI GGYRCC 3 cut(s) 60, 471, 1156
BsiEI CGRYCG 1 cut(s) 738
BsiHKAI GWGCWC 1 cut(s) 418
BsiHKCI CYCGRG 2 cut(s) 16, 679
BsiSI CCGG 4 cut(s) 11, 37, 280, 303
BslFI GGGAC 2 cut(s) 533, 734
BslI CCNNNNNNNGG 4 cut(s) 11, 74, 343, 1104
BsmAI GTCTC 1 cut(s) 13
BsmFI GGGAC 2 cut(s) 533, 734
BsnI GGCC 5 cut(s) 10, 15, 636, 971, 1243
Bso31I GGTCTC 1 cut(s) 13
BsoBI CYCGRG 2 cut(s) 16, 679
Bsp120I GGGCCC 1 cut(s) 13
Bsp1286I GDGCHC 4 cut(s) 17, 296, 418, 426
Bsp143I GATC 1 cut(s) 1084
BspACI CCGC 3 cut(s) 317, 426, 565
BspANI GGCC 5 cut(s) 10, 15, 636, 971, 1243
BspCNI CTCAG 5 cut(s) 205, 211, 490, 757, 1123
BspLI GGNNCC 9 cut(s) 15, 62, 79, 473, 549, 750, 813, 936, 1158
BspT107I GGYRCC 3 cut(s) 60, 471, 1156
BspTNI GGTCTC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 428
BsrDI GCAATG 1 cut(s) 1177
BsrI ACTGG 4 cut(s) 356, 643, 972, 1231
BssECI CCNNGG 6 cut(s) 5, 303, 392, 596, 888, 899
BssMI GATC 1 cut(s) 1084
BssNI GRCGYC 1 cut(s) 261
BssT1I CCWWGG 2 cut(s) 5, 392
Bst2UI CCWGG 2 cut(s) 890, 1245
Bst4CI ACNGT 5 cut(s) 24, 122, 386, 736, 1141
Bst6I CTCTTC 1 cut(s) 720
BstACI GRCGYC 1 cut(s) 261
BstC8I GCNNGC 5 cut(s) 42, 426, 438, 634, 1196
BstDEI CTNAG 5 cut(s) 213, 219, 477, 744, 1131
BstDSI CCRYGG 1 cut(s) 899
BstHHI GCGC 1 cut(s) 1152
BstKTI GATC 1 cut(s) 1087
BstMAI GTCTC 1 cut(s) 13
BstMBI GATC 1 cut(s) 1084
BstMCI CGRYCG 1 cut(s) 738
BstMWI GCNNNNNNNGC 5 cut(s) 46, 157, 260, 316, 570
BstNI CCWGG 2 cut(s) 890, 1245
BstNSI RCATGY 1 cut(s) 782
BstSCI CCNGG 4 cut(s) 10, 302, 888, 1243
BstSFI CTRYAG 1 cut(s) 1236
BstSLI GKGCMC 2 cut(s) 17, 296
BstV1I GCAGC 2 cut(s) 147, 319
BstXI CCANNNNNNTGG 1 cut(s) 979
Bsu36I CCTNAGG 1 cut(s) 744
BsuRI GGCC 5 cut(s) 10, 15, 636, 971, 1243
BtgI CCRYGG 1 cut(s) 899
BtsIMutI CAGTG 3 cut(s) 294, 979, 1224
Cac8I GCNNGC 5 cut(s) 42, 426, 438, 634, 1196
CaiI CAGNNNCTG 1 cut(s) 1244
CfoI GCGC 1 cut(s) 1152
Cfr13I GGNCC 8 cut(s) 13, 14, 547, 740, 748, 771, 935, 1241
CseI GACGC 1 cut(s) 269
Csp6I GTAC 4 cut(s) 223, 579, 759, 954
CviAII CATG 6 cut(s) 70, 226, 568, 779, 880, 951
CviQI GTAC 4 cut(s) 223, 579, 759, 954
DdeI CTNAG 5 cut(s) 213, 219, 477, 744, 1131
DpnI GATC 1 cut(s) 1086
DpnII GATC 1 cut(s) 1084
DraIII CACNNNGTG 1 cut(s) 1104
DriI GACNNNNNGTC 1 cut(s) 933
EaeI YGGCCR 2 cut(s) 634, 969
Eam1104I CTCTTC 1 cut(s) 720
Eam1105I GACNNNNNGTC 1 cut(s) 933
EarI CTCTTC 1 cut(s) 720
Eco130I CCWWGG 2 cut(s) 5, 392
Eco24I GRGCYC 2 cut(s) 17, 426
Eco31I GGTCTC 1 cut(s) 13
Eco47I GGWCC 5 cut(s) 547, 740, 748, 771, 935
Eco57I CTGAAG 1 cut(s) 744
Eco81I CCTNAGG 1 cut(s) 744
Eco88I CYCGRG 2 cut(s) 16, 679
EcoO109I RGGNCCY 3 cut(s) 748, 935, 1241
EcoRI GAATTC 1 cut(s) 1108
EcoRII CCWGG 2 cut(s) 888, 1243
EcoT14I CCWWGG 2 cut(s) 5, 392
EcoT38I GRGCYC 2 cut(s) 17, 426
ErhI CCWWGG 2 cut(s) 5, 392
FaeI CATG 6 cut(s) 73, 229, 571, 782, 883, 954
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FaqI GGGAC 2 cut(s) 533, 734
FatI CATG 6 cut(s) 69, 225, 567, 778, 879, 950
FauI CCCGC 1 cut(s) 433
Fnu4HI GCNGC 4 cut(s) 161, 317, 333, 565
FriOI GRGCYC 2 cut(s) 17, 426
Fsp4HI GCNGC 4 cut(s) 161, 317, 333, 565
FspBI CTAG 5 cut(s) 6, 441, 495, 591, 768
GlaI GCGC 1 cut(s) 1151
GluI GCNGC 4 cut(s) 161, 317, 333, 565
GsuI CTGGAG 1 cut(s) 339
HaeIII GGCC 5 cut(s) 10, 15, 636, 971, 1243
HapII CCGG 4 cut(s) 11, 37, 280, 303
HgaI GACGC 1 cut(s) 269
HhaI GCGC 1 cut(s) 1152
Hin1I GRCGYC 1 cut(s) 261
Hin1II CATG 6 cut(s) 73, 229, 571, 782, 883, 954
Hin6I GCGC 1 cut(s) 1150
HinP1I GCGC 1 cut(s) 1150
HincII GTYRAC 3 cut(s) 268, 660, 927
HindII GTYRAC 3 cut(s) 268, 660, 927
HindIII AAGCTT 1 cut(s) 964
HinfI GANTC 4 cut(s) 229, 554, 867, 1094
HpaI GTTAAC 1 cut(s) 268
HpaII CCGG 4 cut(s) 11, 37, 280, 303
HphI GGTGA 2 cut(s) 704, 1026
Hpy166II GTNNAC 9 cut(s) 118, 268, 532, 660, 732, 927, 946, 1098, 1224
Hpy188I TCNGA 6 cut(s) 179, 214, 600, 1114, 1125, 1132
Hpy188III TCNNGA 3 cut(s) 233, 369, 1007
Hpy8I GTNNAC 9 cut(s) 118, 268, 532, 660, 732, 927, 946, 1098, 1224
HpyCH4III ACNGT 5 cut(s) 24, 122, 386, 736, 1141
HpyCH4IV ACGT 1 cut(s) 929
HpyCH4V TGCA 3 cut(s) 351, 515, 539
HpyF10VI GCNNNNNNNGC 5 cut(s) 46, 157, 260, 316, 570
HpyF3I CTNAG 5 cut(s) 213, 219, 477, 744, 1131
HpySE526I ACGT 1 cut(s) 929
Hsp92I GRCGYC 1 cut(s) 261
Hsp92II CATG 6 cut(s) 73, 229, 571, 782, 883, 954
HspAI GCGC 1 cut(s) 1150
KspAI GTTAAC 1 cut(s) 268
Kzo9I GATC 1 cut(s) 1084
LmnI GCTCC 2 cut(s) 307, 433
Lsp1109I GCAGC 2 cut(s) 147, 319
MaeI CTAG 5 cut(s) 6, 441, 495, 591, 768
MaeII ACGT 1 cut(s) 929
MaeIII GTNAC 4 cut(s) 127, 398, 796, 858
MalI GATC 1 cut(s) 1086
MbiI CCGCTC 1 cut(s) 428
MboI GATC 1 cut(s) 1084
MboII GAAGA 5 cut(s) 145, 148, 737, 972, 995
MfeI CAATTG 1 cut(s) 792
MhlI GDGCHC 4 cut(s) 17, 296, 418, 426
MlsI TGGCCA 2 cut(s) 636, 971
MluCI AATT 8 cut(s) 189, 208, 273, 499, 601, 792, 1000, 1108
MluNI TGGCCA 2 cut(s) 636, 971
MlyI GAGTC 1 cut(s) 1103
MmeI TCCRAC 1 cut(s) 1103
Mox20I TGGCCA 2 cut(s) 636, 971
MroXI GAANNNNTTC 1 cut(s) 830
MscI TGGCCA 2 cut(s) 636, 971
MseI TTAA 3 cut(s) 267, 339, 1022
Msp20I TGGCCA 2 cut(s) 636, 971
MspI CCGG 4 cut(s) 11, 37, 280, 303
MspR9I CCNGG 4 cut(s) 12, 304, 890, 1245
MunI CAATTG 1 cut(s) 792
MvaI CCWGG 2 cut(s) 890, 1245
MwoI GCNNNNNNNGC 5 cut(s) 46, 157, 260, 316, 570
NciI CCSGG 2 cut(s) 12, 304
NdeII GATC 1 cut(s) 1084
NlaIII CATG 6 cut(s) 73, 229, 571, 782, 883, 954
NlaIV GGNNCC 9 cut(s) 15, 62, 79, 473, 549, 750, 813, 936, 1158
NmuCI GTSAC 1 cut(s) 858
NspI RCATGY 1 cut(s) 782
PciI ACATGT 1 cut(s) 778
PdmI GAANNNNTTC 1 cut(s) 830
PfeI GAWTC 3 cut(s) 229, 554, 867
PflMI CCANNNNNTGG 1 cut(s) 1104
PkrI GCNGC 4 cut(s) 162, 318, 334, 566
PleI GAGTC 1 cut(s) 1102
PpsI GAGTC 1 cut(s) 1102
PpuMI RGGWCCY 2 cut(s) 748, 935
PscI ACATGT 1 cut(s) 778
Psp5II RGGWCCY 2 cut(s) 748, 935
Psp6I CCWGG 2 cut(s) 888, 1243
PspGI CCWGG 2 cut(s) 888, 1243
PspN4I GGNNCC 9 cut(s) 15, 62, 79, 473, 549, 750, 813, 936, 1158
PspOMI GGGCCC 1 cut(s) 13
PspPI GGNCC 8 cut(s) 13, 14, 547, 740, 748, 771, 935, 1241
PspPPI RGGWCCY 2 cut(s) 748, 935
PstNI CAGNNNCTG 1 cut(s) 1244
RsaI GTAC 4 cut(s) 224, 580, 760, 955
RsaNI GTAC 4 cut(s) 223, 579, 759, 954
SaqAI TTAA 3 cut(s) 267, 339, 1022
SatI GCNGC 4 cut(s) 161, 317, 333, 565
Sau3AI GATC 1 cut(s) 1084
Sau96I GGNCC 8 cut(s) 13, 14, 547, 740, 748, 771, 935, 1241
ScaI AGTACT 1 cut(s) 580
SchI GAGTC 1 cut(s) 1103
ScrFI CCNGG 4 cut(s) 12, 304, 890, 1245
SduI GDGCHC 4 cut(s) 17, 296, 418, 426
SfcI CTRYAG 1 cut(s) 1236
SinI GGWCC 5 cut(s) 547, 740, 748, 771, 935
SmlI CTYRAG 3 cut(s) 617, 840, 1005
SmoI CTYRAG 3 cut(s) 617, 840, 1005
Sse9I AATT 8 cut(s) 189, 208, 273, 499, 601, 792, 1000, 1108
SsiI CCGC 3 cut(s) 317, 426, 565
SspI AATATT 1 cut(s) 1190
SspMI CTAG 5 cut(s) 6, 441, 495, 591, 768
StyD4I CCNGG 4 cut(s) 10, 302, 888, 1243
StyI CCWWGG 2 cut(s) 5, 392
TaaI ACNGT 5 cut(s) 24, 122, 386, 736, 1141
TaiI ACGT 1 cut(s) 932
TaqI TCGA 6 cut(s) 368, 674, 909, 958, 995, 1231
TaqII GACCGA 1 cut(s) 728
TasI AATT 8 cut(s) 189, 208, 273, 499, 601, 792, 1000, 1108
TatI WGTACW 4 cut(s) 222, 578, 758, 953
TauI GCSGC 2 cut(s) 319, 567
TfiI GAWTC 3 cut(s) 229, 554, 867
Tru1I TTAA 3 cut(s) 267, 339, 1022
Tru9I TTAA 3 cut(s) 267, 339, 1022
TscAI CASTG 3 cut(s) 301, 979, 1231
TseFI GTSAC 1 cut(s) 858
TseI GCWGC 2 cut(s) 160, 332
Tsp45I GTSAC 1 cut(s) 858
TspDTI ATGAA 2 cut(s) 242, 480
TspGWI ACGGA 2 cut(s) 394, 720
TspRI CASTG 3 cut(s) 301, 979, 1231
Van91I CCANNNNNTGG 1 cut(s) 1104
VpaK11BI GGWCC 5 cut(s) 547, 740, 748, 771, 935
XapI RAATTY 1 cut(s) 1108
XceI RCATGY 1 cut(s) 782
XmaJI CCTAGG 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 830
XspI CTAG 5 cut(s) 6, 441, 495, 591, 768
ZrmI AGTACT 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.