Prupe.7G258400_v2.0.a1

Belongs to the glycosyl hydrolase 18 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
21566516 .. 21568189
1674 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G258400.1

Sequence Viewer

Length: 1155 bp
ATGGCAAGCCTCAATGACTTGGTGCATATTCTTTTGCTTTCCTGTTCCTTGATGATCTTCAACACTGGCTGTATGGCAGACTCGCTTTCAGACCCTCCTCCCCCTGTGAAGTCGGCCTATTATCCTTCATGGTTGTCAGATGATTTCCCACCTTCAGCTATAAACACATCATTCTTCACTCACATCTTCTATGCCTTTCTTGTGCCAAACGATGTCACTTTCAAATTTGACTTGTCAAATTCAACAGCTTTGCTTCTCTCCAATTTCACCACCACCCTCCATCACAAACATCCACCAGTGAAGACCCTCTTGTCCTTAGGTGGTGGCGGAGATGACCCAGAACTACCTAAAATCTTTGCTCGCATGGCCTCGGAGCCCTCCTCACGTTCACATTTCATACACTCTGCCATAGAGGTTGCACGTAAGTTTGGGTTTGATGGGCTGGATCTTGATTGGGAATTCCCTAAAAGCCCAAAAGAAATGAAGGACTTGGGCCACTTGCTCAAAGAATGGCGCCACGCACTCAAGAAAGAGGCTAAATCCACAGCCCGCCCTCCTCTCCTACTCACCGCCGCCGTCTACTTCTCGGCCGACTTCTTCTTGGCCAATGTCCCCCGCTCCTACCCAATGCCGCACATGAATAAATACTTGGACTGGATTAATGCAATGTGTTTCGACTATAACGGGGCTTGGAGCAATACCACAGGGCCCAATGCAGCATTGCTTGACCCGAAGAGTAAAGTAAACTCCATATACGGGCTTAGGTCATGGATCAAGGCCGGGATACCCCCAAAGAAGCTAGTTATGGGCTTGCCACTCTACGGCCGGACATGGGAGCTCAAAGACCCAAATAATCATAGTATTGGAGCTACTGCTGTTGGGCCAGGCCCAGGAGATGGGCAGCTGTTGTTCCATCAGGTGGAGACACTGCTGAACCAGTCGGGCGCAACCGTAGTGTATGACGTGGACACTATGACAGTATATTCTTTTAACGGGTCTTCATGGGTTTCGTTTGATGATGCGTTTACTACAACCTCCAAGATAGGGTATGCTCAAGCCCTTGGGCTTCGTGGATACTTCTTTTGGGCCCTCACATATGATAGCGACTGGAAGATTTCGGCGCAAGCTTCAAATTCATGGATTCTCGACGAATGA

Protein Analysis

385

Amino Acids

42.64

Weight (kDa)

6.17

Isoelectric Point (pI)

35.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 310
AccB1I GGYRCC 1 cut(s) 513
AccB7I CCANNNNNTGG 2 cut(s) 896, 919
AccBSI CCGCTC 1 cut(s) 618
AccI GTMKAC 1 cut(s) 579
AciI CCGC 6 cut(s) 327, 550, 570, 573, 616, 632
AclWI GGATC 2 cut(s) 453, 779
AcoI YGGCCR 3 cut(s) 588, 603, 823
AcsI RAATTY 4 cut(s) 224, 238, 458, 1132
AcuI CTGAAG 1 cut(s) 138
AcyI GRCGYC 1 cut(s) 514
AfiI CCNNNNNNNGG 7 cut(s) 756, 821, 832, 890, 896, 919, 1044
AgsI TTSAA 4 cut(s) 61, 223, 243, 1131
AjiI CACGTC 1 cut(s) 964
AjnI CCWGG 2 cut(s) 883, 889
AjuI GAANNNNNNNTTGG 2 cut(s) 632, 664
AluBI AGCT 7 cut(s) 158, 248, 799, 838, 869, 904, 1127
AluI AGCT 7 cut(s) 158, 248, 799, 838, 869, 904, 1127
Alw21I GWGCWC 1 cut(s) 840
Alw26I GTCTC 1 cut(s) 917
AlwI GGATC 2 cut(s) 453, 779
ApaI GGGCCC 2 cut(s) 711, 1090
ApeKI GCWGC 2 cut(s) 716, 901
ApoI RAATTY 4 cut(s) 224, 238, 458, 1132
AseI ATTAAT 1 cut(s) 660
AspLEI GCGC 3 cut(s) 516, 947, 1123
AspS9I GGNCC 7 cut(s) 493, 707, 708, 881, 887, 1086, 1087
AsuC2I CCSGG 1 cut(s) 781
AsuHPI GGTGA 2 cut(s) 259, 559
AxyI CCTNAGG 1 cut(s) 316
BaeGI GKGCMC 2 cut(s) 711, 1090
BalI TGGCCA 1 cut(s) 605
BanI GGYRCC 1 cut(s) 513
BanII GRGCYC 4 cut(s) 378, 711, 840, 1090
BbsI GAAGAC 2 cut(s) 308, 990
Bbv12I GWGCWC 1 cut(s) 840
BbvI GCAGC 2 cut(s) 728, 913
BccI CCATC 4 cut(s) 288, 431, 890, 921
BceAI ACGGC 2 cut(s) 560, 838
BciT130I CCWGG 2 cut(s) 885, 891
BciVI GTATCC 2 cut(s) 777, 1067
BcnI CCSGG 1 cut(s) 781
BcoDI GTCTC 1 cut(s) 917
BfaI CTAG 1 cut(s) 800
BfoI RGCGCY 1 cut(s) 517
BfuI GTATCC 2 cut(s) 777, 1067
BisI GCNGC 4 cut(s) 573, 632, 717, 902
BlsI GCNGC 4 cut(s) 574, 633, 718, 903
Bme1390I CCNGG 3 cut(s) 781, 885, 891
BmgBI CACGTC 1 cut(s) 964
BmgT120I GGNCC 7 cut(s) 493, 707, 708, 881, 887, 1086, 1087
BmiI GGNNCC 4 cut(s) 375, 515, 709, 1088
BmrFI CCNGG 3 cut(s) 781, 885, 891
BmsI GCATC 1 cut(s) 1009
BpiI GAAGAC 2 cut(s) 308, 990
BplI GAGNNNNNCTC 2 cut(s) 365, 397
Bpu10I CCTNAGC 1 cut(s) 761
BpuEI CTTGAG 2 cut(s) 509, 1038
BpuMI CCSGG 1 cut(s) 781
BsaAI YACGTR 1 cut(s) 422
BsaHI GRCGYC 1 cut(s) 514
BsaJI CCNNGG 3 cut(s) 369, 889, 1060
Bsc4I CCNNNNNNNGG 7 cut(s) 756, 821, 832, 890, 896, 919, 1044
Bse1I ACTGG 5 cut(s) 70, 296, 659, 937, 1112
Bse21I CCTNAGG 1 cut(s) 316
Bse3DI GCAATG 2 cut(s) 672, 719
BseBI CCWGG 2 cut(s) 885, 891
BseDI CCNNGG 3 cut(s) 369, 889, 1060
BseGI GGATG 1 cut(s) 289
BseLI CCNNNNNNNGG 7 cut(s) 756, 821, 832, 890, 896, 919, 1044
BseMI GCAATG 2 cut(s) 672, 719
BseNI ACTGG 5 cut(s) 70, 296, 659, 937, 1112
BseRI GAGGAG 3 cut(s) 87, 370, 546
BseSI GKGCMC 2 cut(s) 711, 1090
BseX3I CGGCCG 2 cut(s) 588, 823
BseXI GCAGC 2 cut(s) 728, 913
Bsh1285I CGRYCG 2 cut(s) 591, 826
BshNI GGYRCC 1 cut(s) 513
BsiEI CGRYCG 2 cut(s) 591, 826
BsiHKAI GWGCWC 1 cut(s) 840
BsiSI CCGG 2 cut(s) 780, 826
BslFI GGGAC 1 cut(s) 596
BslI CCNNNNNNNGG 7 cut(s) 756, 821, 832, 890, 896, 919, 1044
BsmAI GTCTC 1 cut(s) 917
BsmFI GGGAC 1 cut(s) 596
Bsp120I GGGCCC 2 cut(s) 707, 1086
Bsp1286I GDGCHC 4 cut(s) 378, 711, 840, 1090
Bsp143I GATC 3 cut(s) 54, 445, 771
BspACI CCGC 6 cut(s) 327, 550, 570, 573, 616, 632
BspLI GGNNCC 4 cut(s) 375, 515, 709, 1088
BspPI GGATC 2 cut(s) 453, 779
BspT107I GGYRCC 1 cut(s) 513
BsrBI CCGCTC 1 cut(s) 618
BsrDI GCAATG 2 cut(s) 672, 719
BsrI ACTGG 5 cut(s) 70, 296, 659, 937, 1112
BssECI CCNNGG 3 cut(s) 369, 889, 1060
BssMI GATC 3 cut(s) 54, 445, 771
BssNI GRCGYC 1 cut(s) 514
BssT1I CCWWGG 1 cut(s) 1060
Bst2UI CCWGG 2 cut(s) 885, 891
Bst4CI ACNGT 2 cut(s) 952, 979
Bst6I CTCTTC 1 cut(s) 728
BstACI GRCGYC 1 cut(s) 514
BstBAI YACGTR 1 cut(s) 422
BstC8I GCNNGC 5 cut(s) 7, 361, 550, 812, 1125
BstDEI CTNAG 2 cut(s) 316, 761
BstF5I GGATG 1 cut(s) 289
BstH2I RGCGCY 1 cut(s) 517
BstHHI GCGC 3 cut(s) 516, 947, 1123
BstKTI GATC 3 cut(s) 57, 448, 774
BstMAI GTCTC 1 cut(s) 917
BstMBI GATC 3 cut(s) 54, 445, 771
BstMCI CGRYCG 2 cut(s) 591, 826
BstMWI GCNNNNNNNGC 1 cut(s) 365
BstNI CCWGG 2 cut(s) 885, 891
BstSCI CCNGG 3 cut(s) 779, 883, 889
BstSLI GKGCMC 2 cut(s) 711, 1090
BstV1I GCAGC 2 cut(s) 728, 913
BstV2I GAAGAC 2 cut(s) 308, 990
BstX2I RGATCY 1 cut(s) 445
BstYI RGATCY 1 cut(s) 445
BstZI CGGCCG 2 cut(s) 588, 823
Bsu36I CCTNAGG 1 cut(s) 316
BsuI GTATCC 2 cut(s) 777, 1067
BtrI CACGTC 1 cut(s) 964
BtsCI GGATG 1 cut(s) 289
BtsI GCAGTG 1 cut(s) 926
BtsIMutI CAGTG 3 cut(s) 63, 303, 926
Cac8I GCNNGC 5 cut(s) 7, 361, 550, 812, 1125
CfoI GCGC 3 cut(s) 516, 947, 1123
Cfr13I GGNCC 7 cut(s) 493, 707, 708, 881, 887, 1086, 1087
CviAII CATG 7 cut(s) 129, 364, 637, 768, 831, 1002, 1137
DdeI CTNAG 2 cut(s) 316, 761
DinI GGCGCC 1 cut(s) 515
DpnI GATC 3 cut(s) 56, 447, 773
DpnII GATC 3 cut(s) 54, 445, 771
DrdI GACNNNNNNGTC 1 cut(s) 310
DseDI GACNNNNNNGTC 1 cut(s) 310
EaeI YGGCCR 3 cut(s) 588, 603, 823
EagI CGGCCG 2 cut(s) 588, 823
Eam1104I CTCTTC 1 cut(s) 728
EarI CTCTTC 1 cut(s) 728
EciI GGCGGA 1 cut(s) 342
Ecl136II GAGCTC 1 cut(s) 838
EclXI CGGCCG 2 cut(s) 588, 823
Eco130I CCWWGG 1 cut(s) 1060
Eco24I GRGCYC 4 cut(s) 378, 711, 840, 1090
Eco52I CGGCCG 2 cut(s) 588, 823
Eco53kI GAGCTC 1 cut(s) 838
Eco57I CTGAAG 1 cut(s) 138
Eco81I CCTNAGG 1 cut(s) 316
EcoICRI GAGCTC 1 cut(s) 838
EcoO109I RGGNCCY 2 cut(s) 707, 1087
EcoRI GAATTC 1 cut(s) 458
EcoRII CCWGG 2 cut(s) 883, 889
EcoT14I CCWWGG 1 cut(s) 1060
EcoT38I GRGCYC 4 cut(s) 378, 711, 840, 1090
EgeI GGCGCC 1 cut(s) 515
EheI GGCGCC 1 cut(s) 515
ErhI CCWWGG 1 cut(s) 1060
FaeI CATG 7 cut(s) 132, 367, 640, 771, 834, 1005, 1140
FalI AAGNNNNNCTT 2 cut(s) 293, 325
FaqI GGGAC 1 cut(s) 596
FatI CATG 7 cut(s) 128, 363, 636, 767, 830, 1001, 1136
FauI CCCGC 2 cut(s) 557, 623
FauNDI CATATG 1 cut(s) 1096
FblI GTMKAC 1 cut(s) 579
Fnu4HI GCNGC 4 cut(s) 573, 632, 717, 902
FokI GGATG 1 cut(s) 276
FriOI GRGCYC 4 cut(s) 378, 711, 840, 1090
Fsp4HI GCNGC 4 cut(s) 573, 632, 717, 902
FspBI CTAG 1 cut(s) 800
GlaI GCGC 3 cut(s) 515, 946, 1122
GluI GCNGC 4 cut(s) 573, 632, 717, 902
HaeII RGCGCY 1 cut(s) 517
HapII CCGG 2 cut(s) 780, 826
HhaI GCGC 3 cut(s) 516, 947, 1123
Hin1I GRCGYC 1 cut(s) 514
Hin1II CATG 7 cut(s) 132, 367, 640, 771, 834, 1005, 1140
Hin6I GCGC 3 cut(s) 514, 945, 1121
HinP1I GCGC 3 cut(s) 514, 945, 1121
HindIII AAGCTT 1 cut(s) 1125
HinfI GANTC 2 cut(s) 80, 1141
HpaII CCGG 2 cut(s) 780, 826
HphI GGTGA 2 cut(s) 259, 559
Hpy166II GTNNAC 5 cut(s) 389, 580, 745, 967, 1026
Hpy188I TCNGA 3 cut(s) 91, 139, 373
Hpy188III TCNNGA 3 cut(s) 449, 526, 1145
Hpy8I GTNNAC 5 cut(s) 389, 580, 745, 967, 1026
Hpy99I CGWCG 1 cut(s) 1151
HpyAV CCTTC 3 cut(s) 135, 162, 478
HpyCH4III ACNGT 2 cut(s) 952, 979
HpyCH4IV ACGT 3 cut(s) 385, 421, 963
HpyCH4V TGCA 4 cut(s) 25, 419, 665, 716
HpyF10VI GCNNNNNNNGC 1 cut(s) 365
HpyF3I CTNAG 2 cut(s) 316, 761
HpySE526I ACGT 3 cut(s) 385, 421, 963
Hsp92I GRCGYC 1 cut(s) 514
Hsp92II CATG 7 cut(s) 132, 367, 640, 771, 834, 1005, 1140
HspAI GCGC 3 cut(s) 514, 945, 1121
KasI GGCGCC 1 cut(s) 513
Kzo9I GATC 3 cut(s) 54, 445, 771
LmnI GCTCC 5 cut(s) 373, 623, 693, 835, 866
Lsp1109I GCAGC 2 cut(s) 728, 913
LweI GCATC 1 cut(s) 1009
MaeI CTAG 1 cut(s) 800
MaeII ACGT 3 cut(s) 385, 421, 963
MaeIII GTNAC 1 cut(s) 214
MalI GATC 3 cut(s) 56, 447, 773
MbiI CCGCTC 1 cut(s) 618
MboI GATC 3 cut(s) 54, 445, 771
MboII GAAGA 8 cut(s) 49, 166, 178, 313, 589, 745, 990, 1123
MflI RGATCY 1 cut(s) 445
MhlI GDGCHC 4 cut(s) 378, 711, 840, 1090
MlsI TGGCCA 1 cut(s) 605
MluCI AATT 5 cut(s) 224, 238, 262, 458, 1132
MluNI TGGCCA 1 cut(s) 605
Mly113I GGCGCC 1 cut(s) 514
MlyI GAGTC 1 cut(s) 74
Mox20I TGGCCA 1 cut(s) 605
MscI TGGCCA 1 cut(s) 605
MseI TTAA 2 cut(s) 660, 990
Msp20I TGGCCA 1 cut(s) 605
MspA1I CMGCKG 1 cut(s) 904
MspI CCGG 2 cut(s) 780, 826
MspR9I CCNGG 3 cut(s) 781, 885, 891
MvaI CCWGG 2 cut(s) 885, 891
MwoI GCNNNNNNNGC 1 cut(s) 365
NarI GGCGCC 1 cut(s) 514
NciI CCSGG 1 cut(s) 781
NdeI CATATG 1 cut(s) 1096
NdeII GATC 3 cut(s) 54, 445, 771
NlaIII CATG 7 cut(s) 132, 367, 640, 771, 834, 1005, 1140
NlaIV GGNNCC 4 cut(s) 375, 515, 709, 1088
NmeAIII GCCGAG 1 cut(s) 566
NmuCI GTSAC 1 cut(s) 214
PfeI GAWTC 1 cut(s) 1141
PflMI CCANNNNNTGG 2 cut(s) 896, 919
PkrI GCNGC 4 cut(s) 574, 633, 718, 903
PleI GAGTC 1 cut(s) 74
PluTI GGCGCC 1 cut(s) 517
PpsI GAGTC 1 cut(s) 74
Ppu21I YACGTR 1 cut(s) 422
PshBI ATTAAT 1 cut(s) 660
Psp124BI GAGCTC 1 cut(s) 840
Psp6I CCWGG 2 cut(s) 883, 889
PspGI CCWGG 2 cut(s) 883, 889
PspN4I GGNNCC 4 cut(s) 375, 515, 709, 1088
PspOMI GGGCCC 2 cut(s) 707, 1086
PspPI GGNCC 7 cut(s) 493, 707, 708, 881, 887, 1086, 1087
PsuI RGATCY 1 cut(s) 445
PvuII CAGCTG 1 cut(s) 904
SacI GAGCTC 1 cut(s) 840
SaqAI TTAA 2 cut(s) 660, 990
SatI GCNGC 4 cut(s) 573, 632, 717, 902
Sau3AI GATC 3 cut(s) 54, 445, 771
Sau96I GGNCC 7 cut(s) 493, 707, 708, 881, 887, 1086, 1087
SchI GAGTC 1 cut(s) 74
ScrFI CCNGG 3 cut(s) 781, 885, 891
SduI GDGCHC 4 cut(s) 378, 711, 840, 1090
SfaNI GCATC 1 cut(s) 1009
SfoI GGCGCC 1 cut(s) 515
SmlI CTYRAG 2 cut(s) 524, 1053
SmoI CTYRAG 2 cut(s) 524, 1053
Sse9I AATT 5 cut(s) 224, 238, 262, 458, 1132
SsiI CCGC 6 cut(s) 327, 550, 570, 573, 616, 632
SspDI GGCGCC 1 cut(s) 513
SspMI CTAG 1 cut(s) 800
SstI GAGCTC 1 cut(s) 840
StyD4I CCNGG 3 cut(s) 779, 883, 889
StyI CCWWGG 1 cut(s) 1060
TaaI ACNGT 2 cut(s) 952, 979
TaiI ACGT 3 cut(s) 388, 424, 966
TaqI TCGA 2 cut(s) 675, 1146
TasI AATT 5 cut(s) 224, 238, 262, 458, 1132
TauI GCSGC 2 cut(s) 575, 634
TfiI GAWTC 1 cut(s) 1141
Tru1I TTAA 2 cut(s) 660, 990
Tru9I TTAA 2 cut(s) 660, 990
TscAI CASTG 3 cut(s) 70, 303, 933
TseFI GTSAC 1 cut(s) 214
TseI GCWGC 2 cut(s) 716, 901
Tsp45I GTSAC 1 cut(s) 214
TspDTI ATGAA 6 cut(s) 117, 385, 497, 653, 990, 1125
TspRI CASTG 3 cut(s) 70, 303, 933
Van91I CCANNNNNTGG 2 cut(s) 896, 919
VspI ATTAAT 1 cut(s) 660
XapI RAATTY 4 cut(s) 224, 238, 458, 1132
XmiI GTMKAC 1 cut(s) 579
XspI CTAG 1 cut(s) 800
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.