Embryogenesis-associated protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G34340 AT5G49950 |
| fragaria_vesca | FvH4_2g12290 FvH4_2g12290 FvH4_4g02600 |
| malus_domestica | MD05G1040100.v1.1 MD10G1046100.v1.1 MD13G1206800.v1.1 MD16G1208100.v1.1 |
| prunus_persica | Prupe.1G030400_v2.0.a1 Prupe.8G053500_v2.0.a1 |
| pyrus_communis | pycom10g03230 pycom16g17540 |
| rosa_chinensis | RchiOBHm_Chr6g0272221 RchiOBHm_Chr6g0272241 RchiOBHm_Chr6g0272251 |
| rosa_laevigata | RLG00000013686 |
| rosa_multiflora | Rmu_sc0009074.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00196460 |
| rosa_rugosa | Rorug06G0067400 |
| rosa_samantha | Rh6AG183800 Rh6AG183900 Rh6BG187100 Rh6BG187200 Rh6CG185200 Rh6CG185400 Rh6DG176900 Rh6DG177200 |
| rosa_wichuraiana | Rw6G015850 Rw6G015870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 615 |
| Acc36I | ACCTGC | 1 cut(s) | 980 |
| AccB1I | GGYRCC | 1 cut(s) | 710 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1110, 1661 |
| AciI | CCGC | 3 cut(s) | 322, 372, 1055 |
| AclWI | GGATC | 1 cut(s) | 1076 |
| AcoI | YGGCCR | 1 cut(s) | 1652 |
| AcsI | RAATTY | 3 cut(s) | 137, 986, 1229 |
| AcuI | CTGAAG | 3 cut(s) | 154, 278, 1658 |
| AcyI | GRCGYC | 2 cut(s) | 225, 269 |
| AfaI | GTAC | 6 cut(s) | 45, 1021, 1143, 1269, 1407, 1509 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 22, 240, 764, 1110, 1496, 1661 |
| AgsI | TTSAA | 5 cut(s) | 163, 532, 1184, 1314, 1412 |
| AjnI | CCWGG | 2 cut(s) | 254, 481 |
| AluBI | AGCT | 8 cut(s) | 189, 339, 776, 1196, 1220, 1526, 1588, 1696 |
| AluI | AGCT | 8 cut(s) | 189, 339, 776, 1196, 1220, 1526, 1588, 1696 |
| Alw21I | GWGCWC | 1 cut(s) | 1294 |
| Alw26I | GTCTC | 2 cut(s) | 986, 1456 |
| Alw44I | GTGCAC | 1 cut(s) | 1290 |
| AlwI | GGATC | 1 cut(s) | 1076 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1017, 1199 |
| AoxI | GGCC | 4 cut(s) | 323, 820, 865, 1652 |
| ApaLI | GTGCAC | 1 cut(s) | 1290 |
| ApeKI | GCWGC | 6 cut(s) | 177, 506, 1196, 1361, 1588, 1715 |
| ApoI | RAATTY | 3 cut(s) | 137, 986, 1229 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1104 |
| AspA2I | CCTAGG | 1 cut(s) | 16 |
| AspLEI | GCGC | 1 cut(s) | 1017 |
| AspS9I | GGNCC | 3 cut(s) | 13, 793, 1325 |
| AsuHPI | GGTGA | 5 cut(s) | 464, 487, 818, 1291, 1557 |
| AvaII | GGWCC | 3 cut(s) | 13, 793, 1325 |
| AvrII | CCTAGG | 1 cut(s) | 16 |
| BaeGI | GKGCMC | 1 cut(s) | 1294 |
| BalI | TGGCCA | 1 cut(s) | 1654 |
| BanI | GGYRCC | 1 cut(s) | 710 |
| BbsI | GAAGAC | 1 cut(s) | 1675 |
| Bbv12I | GWGCWC | 1 cut(s) | 1294 |
| BbvI | GCAGC | 6 cut(s) | 189, 493, 1183, 1373, 1575, 1702 |
| BccI | CCATC | 7 cut(s) | 362, 543, 618, 737, 1270, 1343, 1602 |
| BceAI | ACGGC | 1 cut(s) | 807 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 485, 519 |
| BciT130I | CCWGG | 2 cut(s) | 256, 483 |
| BclI | TGATCA | 1 cut(s) | 958 |
| BcoDI | GTCTC | 2 cut(s) | 986, 1456 |
| BfaI | CTAG | 5 cut(s) | 17, 872, 1095, 1251, 1530 |
| BfmI | CTRYAG | 1 cut(s) | 771 |
| BfoI | RGCGCY | 1 cut(s) | 1018 |
| BfuAI | ACCTGC | 1 cut(s) | 980 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 873 |
| BisI | GCNGC | 8 cut(s) | 178, 323, 507, 1055, 1197, 1362, 1589, 1716 |
| BlnI | CCTAGG | 1 cut(s) | 16 |
| BlsI | GCNGC | 8 cut(s) | 179, 324, 508, 1056, 1198, 1363, 1590, 1717 |
| Bme1390I | CCNGG | 2 cut(s) | 256, 483 |
| Bme18I | GGWCC | 3 cut(s) | 13, 793, 1325 |
| BmgT120I | GGNCC | 3 cut(s) | 13, 793, 1325 |
| BmiI | GGNNCC | 5 cut(s) | 14, 712, 756, 794, 1327 |
| BmrFI | CCNGG | 2 cut(s) | 256, 483 |
| BmsI | GCATC | 3 cut(s) | 493, 529, 1568 |
| BpiI | GAAGAC | 1 cut(s) | 1675 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1495 |
| BpuEI | CTTGAG | 1 cut(s) | 265 |
| BsaAI | YACGTR | 2 cut(s) | 43, 1333 |
| BsaBI | GATNNNNATC | 1 cut(s) | 957 |
| BsaHI | GRCGYC | 2 cut(s) | 225, 269 |
| BsaI | GGTCTC | 1 cut(s) | 1456 |
| BsaJI | CCNNGG | 5 cut(s) | 16, 220, 272, 788, 1109 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 188, 218 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 22, 240, 764, 1110, 1496, 1661 |
| Bse1I | ACTGG | 4 cut(s) | 868, 1023, 1085, 1149 |
| Bse3DI | GCAATG | 2 cut(s) | 1338, 1378 |
| Bse8I | GATNNNNATC | 1 cut(s) | 957 |
| BseBI | CCWGG | 2 cut(s) | 256, 483 |
| BseDI | CCNNGG | 5 cut(s) | 16, 220, 272, 788, 1109 |
| BseGI | GGATG | 3 cut(s) | 554, 629, 748 |
| BseJI | GATNNNNATC | 1 cut(s) | 957 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 22, 240, 764, 1110, 1496, 1661 |
| BseMI | GCAATG | 2 cut(s) | 1338, 1378 |
| BseMII | CTCAG | 5 cut(s) | 322, 389, 1467, 1509, 1711 |
| BseNI | ACTGG | 4 cut(s) | 868, 1023, 1085, 1149 |
| BseRI | GAGGAG | 1 cut(s) | 196 |
| BseSI | GKGCMC | 1 cut(s) | 1294 |
| BseXI | GCAGC | 6 cut(s) | 189, 493, 1183, 1373, 1575, 1702 |
| BseYI | CCCAGC | 1 cut(s) | 764 |
| BsgI | GTGCAG | 1 cut(s) | 1075 |
| BshFI | GGCC | 4 cut(s) | 325, 822, 867, 1654 |
| BshNI | GGYRCC | 1 cut(s) | 710 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1294 |
| BsiSI | CCGG | 1 cut(s) | 241 |
| BslFI | GGGAC | 2 cut(s) | 806, 1311 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 22, 240, 764, 1110, 1496, 1661 |
| BsmAI | GTCTC | 2 cut(s) | 986, 1456 |
| BsmFI | GGGAC | 2 cut(s) | 806, 1311 |
| BsmI | GAATGC | 2 cut(s) | 104, 1124 |
| BsnI | GGCC | 4 cut(s) | 325, 822, 867, 1654 |
| Bso31I | GGTCTC | 1 cut(s) | 1456 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1294 |
| Bsp1407I | TGTACA | 1 cut(s) | 1267 |
| Bsp143I | GATC | 4 cut(s) | 58, 958, 1081, 1318 |
| Bsp19I | CCATGG | 2 cut(s) | 220, 272 |
| BspACI | CCGC | 3 cut(s) | 322, 372, 1055 |
| BspANI | GGCC | 4 cut(s) | 325, 822, 867, 1654 |
| BspCNI | CTCAG | 5 cut(s) | 321, 390, 1466, 1508, 1710 |
| BspLI | GGNNCC | 5 cut(s) | 14, 712, 756, 794, 1327 |
| BspMI | ACCTGC | 1 cut(s) | 980 |
| BspPI | GGATC | 1 cut(s) | 1076 |
| BspT107I | GGYRCC | 1 cut(s) | 710 |
| BspTNI | GGTCTC | 1 cut(s) | 1456 |
| BsrDI | GCAATG | 2 cut(s) | 1338, 1378 |
| BsrGI | TGTACA | 1 cut(s) | 1267 |
| BsrI | ACTGG | 4 cut(s) | 868, 1023, 1085, 1149 |
| BssECI | CCNNGG | 5 cut(s) | 16, 220, 272, 788, 1109 |
| BssMI | GATC | 4 cut(s) | 58, 958, 1081, 1318 |
| BssNI | GRCGYC | 2 cut(s) | 225, 269 |
| BssT1I | CCWWGG | 5 cut(s) | 16, 220, 272, 788, 1109 |
| Bst2UI | CCWGG | 2 cut(s) | 256, 483 |
| Bst4CI | ACNGT | 5 cut(s) | 301, 379, 646, 997, 1296 |
| Bst6I | CTCTTC | 2 cut(s) | 164, 1315 |
| BstACI | GRCGYC | 2 cut(s) | 225, 269 |
| BstAUI | TGTACA | 1 cut(s) | 1267 |
| BstBAI | YACGTR | 2 cut(s) | 43, 1333 |
| BstC8I | GCNNGC | 1 cut(s) | 966 |
| BstDEI | CTNAG | 8 cut(s) | 308, 398, 1453, 1495, 1545, 1582, 1697, 1719 |
| BstDSI | CCRYGG | 2 cut(s) | 220, 272 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 20 |
| BstF5I | GGATG | 3 cut(s) | 554, 629, 748 |
| BstH2I | RGCGCY | 1 cut(s) | 1018 |
| BstHHI | GCGC | 1 cut(s) | 1017 |
| BstKTI | GATC | 4 cut(s) | 61, 961, 1084, 1321 |
| BstMAI | GTCTC | 2 cut(s) | 986, 1456 |
| BstMBI | GATC | 4 cut(s) | 58, 958, 1081, 1318 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 101, 174, 186, 873, 906 |
| BstNI | CCWGG | 2 cut(s) | 256, 483 |
| BstNSI | RCATGY | 2 cut(s) | 968, 1268 |
| BstSCI | CCNGG | 2 cut(s) | 254, 481 |
| BstSFI | CTRYAG | 1 cut(s) | 771 |
| BstSLI | GKGCMC | 1 cut(s) | 1294 |
| BstSNI | TACGTA | 2 cut(s) | 43, 1333 |
| BstV1I | GCAGC | 6 cut(s) | 189, 493, 1183, 1373, 1575, 1702 |
| BstV2I | GAAGAC | 1 cut(s) | 1675 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 262, 721 |
| BsuRI | GGCC | 4 cut(s) | 325, 822, 867, 1654 |
| BtgI | CCRYGG | 2 cut(s) | 220, 272 |
| BtsCI | GGATG | 3 cut(s) | 554, 629, 748 |
| BtsI | GCAGTG | 1 cut(s) | 1371 |
| BtsIMutI | CAGTG | 4 cut(s) | 1030, 1056, 1075, 1371 |
| BveI | ACCTGC | 1 cut(s) | 980 |
| Cac8I | GCNNGC | 1 cut(s) | 966 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1017, 1199 |
| CfoI | GCGC | 1 cut(s) | 1017 |
| Cfr13I | GGNCC | 3 cut(s) | 13, 793, 1325 |
| CseI | GACGC | 2 cut(s) | 214, 277 |
| Csp6I | GTAC | 6 cut(s) | 44, 1020, 1142, 1268, 1406, 1508 |
| CviAII | CATG | 8 cut(s) | 221, 251, 273, 662, 965, 1160, 1265, 1491 |
| CviQI | GTAC | 6 cut(s) | 44, 1020, 1142, 1268, 1406, 1508 |
| DdeI | CTNAG | 8 cut(s) | 308, 398, 1453, 1495, 1545, 1582, 1697, 1719 |
| DpnI | GATC | 4 cut(s) | 60, 960, 1083, 1320 |
| DpnII | GATC | 4 cut(s) | 58, 958, 1081, 1318 |
| EaeI | YGGCCR | 1 cut(s) | 1652 |
| Eam1104I | CTCTTC | 2 cut(s) | 164, 1315 |
| EarI | CTCTTC | 2 cut(s) | 164, 1315 |
| EciI | GGCGGA | 1 cut(s) | 387 |
| Eco105I | TACGTA | 2 cut(s) | 43, 1333 |
| Eco130I | CCWWGG | 5 cut(s) | 16, 220, 272, 788, 1109 |
| Eco31I | GGTCTC | 1 cut(s) | 1456 |
| Eco47I | GGWCC | 3 cut(s) | 13, 793, 1325 |
| Eco57I | CTGAAG | 3 cut(s) | 154, 278, 1658 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 20 |
| EcoO109I | RGGNCCY | 3 cut(s) | 13, 793, 1325 |
| EcoRI | GAATTC | 1 cut(s) | 137 |
| EcoRII | CCWGG | 2 cut(s) | 254, 481 |
| EcoT14I | CCWWGG | 5 cut(s) | 16, 220, 272, 788, 1109 |
| EcoT22I | ATGCAT | 1 cut(s) | 1266 |
| ErhI | CCWWGG | 5 cut(s) | 16, 220, 272, 788, 1109 |
| FaeI | CATG | 8 cut(s) | 224, 254, 276, 665, 968, 1163, 1268, 1494 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1392, 1424 |
| FaqI | GGGAC | 2 cut(s) | 806, 1311 |
| FatI | CATG | 8 cut(s) | 220, 250, 272, 661, 964, 1159, 1264, 1490 |
| FauNDI | CATATG | 1 cut(s) | 1473 |
| FbaI | TGATCA | 1 cut(s) | 958 |
| Fnu4HI | GCNGC | 8 cut(s) | 178, 323, 507, 1055, 1197, 1362, 1589, 1716 |
| FokI | GGATG | 3 cut(s) | 561, 636, 755 |
| Fsp4HI | GCNGC | 8 cut(s) | 178, 323, 507, 1055, 1197, 1362, 1589, 1716 |
| FspBI | CTAG | 5 cut(s) | 17, 872, 1095, 1251, 1530 |
| GlaI | GCGC | 1 cut(s) | 1016 |
| GluI | GCNGC | 8 cut(s) | 178, 323, 507, 1055, 1197, 1362, 1589, 1716 |
| GsaI | CCCAGC | 1 cut(s) | 768 |
| HaeII | RGCGCY | 1 cut(s) | 1018 |
| HaeIII | GGCC | 4 cut(s) | 325, 822, 867, 1654 |
| HapII | CCGG | 1 cut(s) | 241 |
| HgaI | GACGC | 2 cut(s) | 214, 277 |
| HhaI | GCGC | 1 cut(s) | 1017 |
| Hin1I | GRCGYC | 2 cut(s) | 225, 269 |
| Hin1II | CATG | 8 cut(s) | 224, 254, 276, 665, 968, 1163, 1268, 1494 |
| Hin6I | GCGC | 1 cut(s) | 1015 |
| HinP1I | GCGC | 1 cut(s) | 1015 |
| HincII | GTYRAC | 1 cut(s) | 1000 |
| HindII | GTYRAC | 1 cut(s) | 1000 |
| HinfI | GANTC | 6 cut(s) | 244, 478, 497, 1307, 1423, 1541 |
| HpaII | CCGG | 1 cut(s) | 241 |
| HphI | GGTGA | 5 cut(s) | 464, 487, 818, 1291, 1557 |
| Hpy166II | GTNNAC | 3 cut(s) | 1000, 1292, 1336 |
| Hpy188III | TCNNGA | 4 cut(s) | 414, 950, 1455, 1553 |
| Hpy8I | GTNNAC | 3 cut(s) | 1000, 1292, 1336 |
| Hpy99I | CGWCG | 2 cut(s) | 230, 271 |
| HpyAV | CCTTC | 6 cut(s) | 121, 878, 917, 1178, 1527, 1682 |
| HpyCH4III | ACNGT | 5 cut(s) | 301, 379, 646, 997, 1296 |
| HpyCH4IV | ACGT | 3 cut(s) | 42, 940, 1332 |
| HpyCH4V | TGCA | 9 cut(s) | 9, 835, 881, 975, 1092, 1122, 1264, 1292, 1343 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 101, 174, 186, 873, 906 |
| HpyF3I | CTNAG | 8 cut(s) | 308, 398, 1453, 1495, 1545, 1582, 1697, 1719 |
| HpySE526I | ACGT | 3 cut(s) | 42, 940, 1332 |
| Hsp92I | GRCGYC | 2 cut(s) | 225, 269 |
| Hsp92II | CATG | 8 cut(s) | 224, 254, 276, 665, 968, 1163, 1268, 1494 |
| HspAI | GCGC | 1 cut(s) | 1015 |
| Ksp22I | TGATCA | 1 cut(s) | 958 |
| Kzo9I | GATC | 4 cut(s) | 58, 958, 1081, 1318 |
| LmnI | GCTCC | 1 cut(s) | 685 |
| Lsp1109I | GCAGC | 6 cut(s) | 189, 493, 1183, 1373, 1575, 1702 |
| LweI | GCATC | 3 cut(s) | 493, 529, 1568 |
| MaeI | CTAG | 5 cut(s) | 17, 872, 1095, 1251, 1530 |
| MaeII | ACGT | 3 cut(s) | 42, 940, 1332 |
| MaeIII | GTNAC | 6 cut(s) | 452, 595, 653, 806, 936, 1642 |
| MalI | GATC | 4 cut(s) | 60, 960, 1083, 1320 |
| MboI | GATC | 4 cut(s) | 58, 958, 1081, 1318 |
| MhlI | GDGCHC | 1 cut(s) | 1294 |
| MlsI | TGGCCA | 1 cut(s) | 1654 |
| MluCI | AATT | 8 cut(s) | 69, 137, 884, 916, 986, 1030, 1229, 1560 |
| MluNI | TGGCCA | 1 cut(s) | 1654 |
| MlyI | GAGTC | 2 cut(s) | 1301, 1417 |
| MmeI | TCCRAC | 1 cut(s) | 676 |
| Mox20I | TGGCCA | 1 cut(s) | 1654 |
| Mph1103I | ATGCAT | 1 cut(s) | 1266 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1104 |
| MscI | TGGCCA | 1 cut(s) | 1654 |
| MseI | TTAA | 3 cut(s) | 357, 488, 1190 |
| Msp20I | TGGCCA | 1 cut(s) | 1654 |
| MspA1I | CMGCKG | 1 cut(s) | 1196 |
| MspI | CCGG | 1 cut(s) | 241 |
| MspR9I | CCNGG | 2 cut(s) | 256, 483 |
| Mva1269I | GAATGC | 2 cut(s) | 104, 1124 |
| MvaI | CCWGG | 2 cut(s) | 256, 483 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 101, 174, 186, 873, 906 |
| NcoI | CCATGG | 2 cut(s) | 220, 272 |
| NdeI | CATATG | 1 cut(s) | 1473 |
| NdeII | GATC | 4 cut(s) | 58, 958, 1081, 1318 |
| NlaIII | CATG | 8 cut(s) | 224, 254, 276, 665, 968, 1163, 1268, 1494 |
| NlaIV | GGNNCC | 5 cut(s) | 14, 712, 756, 794, 1327 |
| NmuCI | GTSAC | 5 cut(s) | 452, 595, 806, 936, 1642 |
| NsiI | ATGCAT | 1 cut(s) | 1266 |
| NspI | RCATGY | 2 cut(s) | 968, 1268 |
| PaeI | GCATGC | 1 cut(s) | 968 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 946 |
| PctI | GAATGC | 2 cut(s) | 104, 1124 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1104 |
| PfeI | GAWTC | 4 cut(s) | 244, 478, 497, 1541 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1110, 1661 |
| PfoI | TCCNGGA | 1 cut(s) | 481 |
| PkrI | GCNGC | 8 cut(s) | 179, 324, 508, 1056, 1198, 1363, 1590, 1717 |
| PleI | GAGTC | 2 cut(s) | 1301, 1417 |
| PpsI | GAGTC | 2 cut(s) | 1301, 1417 |
| Ppu21I | YACGTR | 2 cut(s) | 43, 1333 |
| PpuMI | RGGWCCY | 3 cut(s) | 13, 793, 1325 |
| PsiI | TTATAA | 1 cut(s) | 615 |
| Psp5II | RGGWCCY | 3 cut(s) | 13, 793, 1325 |
| Psp6I | CCWGG | 2 cut(s) | 254, 481 |
| PspFI | CCCAGC | 1 cut(s) | 764 |
| PspGI | CCWGG | 2 cut(s) | 254, 481 |
| PspN4I | GGNNCC | 5 cut(s) | 14, 712, 756, 794, 1327 |
| PspPI | GGNCC | 3 cut(s) | 13, 793, 1325 |
| PspPPI | RGGWCCY | 3 cut(s) | 13, 793, 1325 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1017, 1199 |
| PvuII | CAGCTG | 1 cut(s) | 1196 |
| RsaI | GTAC | 6 cut(s) | 45, 1021, 1143, 1269, 1407, 1509 |
| RsaNI | GTAC | 6 cut(s) | 44, 1020, 1142, 1268, 1406, 1508 |
| SaqAI | TTAA | 3 cut(s) | 357, 488, 1190 |
| SatI | GCNGC | 8 cut(s) | 178, 323, 507, 1055, 1197, 1362, 1589, 1716 |
| Sau3AI | GATC | 4 cut(s) | 58, 958, 1081, 1318 |
| Sau96I | GGNCC | 3 cut(s) | 13, 793, 1325 |
| SchI | GAGTC | 2 cut(s) | 1301, 1417 |
| ScrFI | CCNGG | 2 cut(s) | 256, 483 |
| SduI | GDGCHC | 1 cut(s) | 1294 |
| SfaNI | GCATC | 3 cut(s) | 493, 529, 1568 |
| SfcI | CTRYAG | 1 cut(s) | 771 |
| SinI | GGWCC | 3 cut(s) | 13, 793, 1325 |
| SmlI | CTYRAG | 1 cut(s) | 280 |
| SmoI | CTYRAG | 1 cut(s) | 280 |
| SnaBI | TACGTA | 2 cut(s) | 43, 1333 |
| SphI | GCATGC | 1 cut(s) | 968 |
| Sse9I | AATT | 8 cut(s) | 69, 137, 884, 916, 986, 1030, 1229, 1560 |
| SsiI | CCGC | 3 cut(s) | 322, 372, 1055 |
| SspI | AATATT | 1 cut(s) | 1138 |
| SspMI | CTAG | 5 cut(s) | 17, 872, 1095, 1251, 1530 |
| StyD4I | CCNGG | 2 cut(s) | 254, 481 |
| StyI | CCWWGG | 5 cut(s) | 16, 220, 272, 788, 1109 |
| TaaI | ACNGT | 5 cut(s) | 301, 379, 646, 997, 1296 |
| TaiI | ACGT | 3 cut(s) | 45, 943, 1335 |
| TaqI | TCGA | 1 cut(s) | 135 |
| TasI | AATT | 8 cut(s) | 69, 137, 884, 916, 986, 1030, 1229, 1560 |
| TatI | WGTACW | 3 cut(s) | 1141, 1267, 1405 |
| TauI | GCSGC | 2 cut(s) | 325, 1057 |
| TfiI | GAWTC | 4 cut(s) | 244, 478, 497, 1541 |
| Tru1I | TTAA | 3 cut(s) | 357, 488, 1190 |
| Tru9I | TTAA | 3 cut(s) | 357, 488, 1190 |
| TscAI | CASTG | 4 cut(s) | 1030, 1056, 1075, 1371 |
| TseFI | GTSAC | 5 cut(s) | 452, 595, 806, 936, 1642 |
| TseI | GCWGC | 6 cut(s) | 177, 506, 1196, 1361, 1588, 1715 |
| Tsp45I | GTSAC | 5 cut(s) | 452, 595, 806, 936, 1642 |
| TspDTI | ATGAA | 4 cut(s) | 681, 1242, 1389, 1458 |
| TspGWI | ACGGA | 3 cut(s) | 655, 1615, 1700 |
| TspRI | CASTG | 4 cut(s) | 1030, 1056, 1075, 1371 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1110, 1661 |
| VneI | GTGCAC | 1 cut(s) | 1290 |
| VpaK11BI | GGWCC | 3 cut(s) | 13, 793, 1325 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 20 |
| XapI | RAATTY | 3 cut(s) | 137, 986, 1229 |
| XceI | RCATGY | 2 cut(s) | 968, 1268 |
| XmaJI | CCTAGG | 1 cut(s) | 16 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1104 |
| XspI | CTAG | 5 cut(s) | 17, 872, 1095, 1251, 1530 |
| Zsp2I | ATGCAT | 1 cut(s) | 1266 |