Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008356

Physical Location & Seq

Genomic Coordinates Reverse (-)

7251595 .. 7256175

Gene Structure 4581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G057800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 831 bp

ATGGCGGCTCCAAGAAATCTGGTGGGGGACGCGGGGAGGCTGCTGAGGGATGAGGAGAGTGCAAAGGAGGACGATTGGTCCGCCGGAAAGAAGCTCAAGTCCGAGAGGTTTCCGCTGACGCGATGGGAGTTCGCGGCGGCTCTCGGCGTTTTTGTGGTCTTCTCTACGGGCCTCATCTGCGTCTACTTGACCATGCCCGCCGCGGAGTATGGTAAACTCAAGCTGCCGCGCACCATTGCCGATCTTCGCTTGCTCAAAGATCATCTTGCAACATATGCAAAAGACTATCCAGCACAATTCATTCTGGGTTACTGCTCTACTTACATCTTCATGCAGACTTTTATGATTCCTGGAACAATTTTTATGTCATTGCTAGCTGGAGCTCTTTTTGGTGTCATTAGAGGCCTTCTCTTGGTTGTCTTTAATGCTACAGCTGGAGCATCATCCTGCTTCTTTTTGTCTAAGTTAATTGGCAGGCCTTTAGTTAGTTGGTTGTGGCCAGAAAAGTTGAGATTTTTTCAGGCAGAGATTGCAAAGCGTAGGGAAAAGCTGCTGAATTACATGCTTTTCCTGAGGATAACTCCAACATTGCCGAACCTTTTTATCAACTTGGCATCTCCAATTGTTGATATACCATTTCATGTGTTCTTTCTGGCGACTTTTATTGGTCTTATTCCAGCATCTTATATCACAGTCCGAGCTGGCCTTGCTCTTGGGGAACTCAAGTCAGTCAAGGATCTCTATGATTTTAAAACCTTGGTTGTGCTTTTCCTTATTGGTTCTGTGATTATATTTCCAACCCTTTTGAAGAGGAAGCGAATTTATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SNARE_assoc

Protein Analysis

277

Amino Acids

31.1

Weight (kDa)

9.66

Isoelectric Point (pI)

35.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008356)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71940 AT4G09580
fragaria_vesca	FvH4_2g11950 FvH4_2g11950 FvH4_2g11950
malus_domestica	MD05G1041900.v1.1 MD10G1048400.v1.1
prunus_persica	Prupe.8G057800_v2.0.a1
pyrus_communis	pycom05g03460 pycom10g03440
rosa_chinensis	RchiOBHm_Chr6g0272001
rosa_laevigata	RLG00000013710
rosa_multiflora	Rmu_sc0004379.1_g000007
rosa_roxburghii	Rroxscaffold_173G00434980 Rroxscaffold_7G00196800
rosa_rugosa	Rorug06G0064500 Rorug06G0064500 Rorug06G0064500
rosa_samantha	Rh6BG185100 Rh6CG183300 Rh6DG174800
rosa_wichuraiana	Rw6G015620 Rw6G015680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	183
AccII	CGCG	5 cut(s)	32, 121, 134, 203, 229
AclWI	GGATC	1 cut(s)	744
AcoI	YGGCCR	1 cut(s)	497
AcsI	RAATTY	1 cut(s)	819
AfiI	CCNNNNNNNGG	1 cut(s)	412
AgsI	TTSAA	1 cut(s)	808
AhdI	GACNNNNNGTC	1 cut(s)	76
AjnI	CCWGG	1 cut(s)	349
AluBI	AGCT	7 cut(s)	94, 223, 377, 383, 434, 550, 701
AluI	AGCT	7 cut(s)	94, 223, 377, 383, 434, 550, 701
Alw21I	GWGCWC	1 cut(s)	385
AlwI	GGATC	1 cut(s)	744
AoxI	GGCC	5 cut(s)	169, 403, 476, 497, 703
ApeKI	GCWGC	3 cut(s)	40, 223, 550
ApoI	RAATTY	1 cut(s)	819
AspLEI	GCGC	1 cut(s)	231
AspS9I	GGNCC	2 cut(s)	78, 169
AsuNHI	GCTAGC	1 cut(s)	373
AvaII	GGWCC	1 cut(s)	78
AxyI	CCTNAGG	1 cut(s)	572
BalI	TGGCCA	1 cut(s)	499
BanII	GRGCYC	1 cut(s)	385
BbsI	GAAGAC	1 cut(s)	151
Bbv12I	GWGCWC	1 cut(s)	385
BbvCI	CCTCAGC	1 cut(s)	44
BbvI	GCAGC	3 cut(s)	27, 210, 537
BccI	CCATC	1 cut(s)	117
BciT130I	CCWGG	1 cut(s)	351
BfaI	CTAG	1 cut(s)	374
BfmI	CTRYAG	1 cut(s)	429
BisI	GCNGC	8 cut(s)	6, 41, 135, 138, 201, 224, 227, 551
BlsI	GCNGC	8 cut(s)	7, 42, 136, 139, 202, 225, 228, 552
Bme1390I	CCNGG	1 cut(s)	351
Bme18I	GGWCC	1 cut(s)	78
BmeRI	GACNNNNNGTC	1 cut(s)	76
BmgT120I	GGNCC	2 cut(s)	78, 169
BmiI	GGNNCC	1 cut(s)	9
BmrFI	CCNGG	1 cut(s)	351
BmsI	GCATC	3 cut(s)	449, 623, 689
BmtI	GCTAGC	1 cut(s)	377
BpiI	GAAGAC	1 cut(s)	151
BplI	GAGNNNNNCTC	4 cut(s)	393, 425, 565, 597
BpmI	CTGGAG	2 cut(s)	399, 456
Bpu10I	CCTNAGC	1 cut(s)	44
BpuEI	CTTGAG	3 cut(s)	80, 203, 707
BsaJI	CCNNGG	2 cut(s)	201, 756
Bsc4I	CCNNNNNNNGG	1 cut(s)	412
Bse21I	CCTNAGG	1 cut(s)	572
Bse3DI	GCAATG	3 cut(s)	234, 368, 587
BseBI	CCWGG	1 cut(s)	351
BseDI	CCNNGG	2 cut(s)	201, 756
BseGI	GGATG	2 cut(s)	55, 443
BseLI	CCNNNNNNNGG	1 cut(s)	412
BseMI	GCAATG	3 cut(s)	234, 368, 587
BseMII	CTCAG	2 cut(s)	35, 563
BseRI	GAGGAG	1 cut(s)	68
BseXI	GCAGC	3 cut(s)	27, 210, 537
Bsh1236I	CGCG	5 cut(s)	32, 121, 134, 203, 229
BshFI	GGCC	5 cut(s)	171, 405, 478, 499, 705
BsiHKAI	GWGCWC	1 cut(s)	385
BsiSI	CCGG	1 cut(s)	84
BslFI	GGGAC	1 cut(s)	41
BslI	CCNNNNNNNGG	1 cut(s)	412
BsmFI	GGGAC	1 cut(s)	41
BsnI	GGCC	5 cut(s)	171, 405, 478, 499, 705
Bsp1286I	GDGCHC	1 cut(s)	385
Bsp143I	GATC	3 cut(s)	241, 259, 736
BspANI	GGCC	5 cut(s)	171, 405, 478, 499, 705
BspCNI	CTCAG	2 cut(s)	36, 564
BspFNI	CGCG	5 cut(s)	32, 121, 134, 203, 229
BspLI	GGNNCC	1 cut(s)	9
BspOI	GCTAGC	1 cut(s)	377
BspPI	GGATC	1 cut(s)	744
BsrDI	GCAATG	3 cut(s)	234, 368, 587
BssECI	CCNNGG	2 cut(s)	201, 756
BssMI	GATC	3 cut(s)	241, 259, 736
BssT1I	CCWWGG	1 cut(s)	756
Bst2UI	CCWGG	1 cut(s)	351
Bst4CI	ACNGT	1 cut(s)	694
Bst6I	CTCTTC	1 cut(s)	803
BstAPI	GCANNNNNTGC	2 cut(s)	275, 530
BstC8I	GCNNGC	5 cut(s)	198, 251, 375, 476, 703
BstDEI	CTNAG	3 cut(s)	44, 462, 572
BstDSI	CCRYGG	1 cut(s)	201
BstF5I	GGATG	2 cut(s)	55, 443
BstFNI	CGCG	5 cut(s)	32, 121, 134, 203, 229
BstHHI	GCGC	1 cut(s)	231
BstKTI	GATC	3 cut(s)	244, 262, 739
BstMBI	GATC	3 cut(s)	241, 259, 736
BstMWI	GCNNNNNNNGC	4 cut(s)	177, 275, 530, 707
BstNI	CCWGG	1 cut(s)	351
BstNSI	RCATGY	1 cut(s)	565
BstSCI	CCNGG	1 cut(s)	349
BstSFI	CTRYAG	1 cut(s)	429
BstUI	CGCG	5 cut(s)	32, 121, 134, 203, 229
BstV1I	GCAGC	3 cut(s)	27, 210, 537
BstV2I	GAAGAC	1 cut(s)	151
BstX2I	RGATCY	1 cut(s)	736
BstYI	RGATCY	1 cut(s)	736
Bsu36I	CCTNAGG	1 cut(s)	572
BsuRI	GGCC	5 cut(s)	171, 405, 478, 499, 705
BtgI	CCRYGG	1 cut(s)	201
BtgZI	GCGATG	1 cut(s)	136
BtsCI	GGATG	2 cut(s)	55, 443
Cac8I	GCNNGC	5 cut(s)	198, 251, 375, 476, 703
CfoI	GCGC	1 cut(s)	231
Cfr13I	GGNCC	2 cut(s)	78, 169
Cfr42I	CCGCGG	1 cut(s)	204
CseI	GACGC	3 cut(s)	38, 127, 169
CviAII	CATG	4 cut(s)	193, 331, 562, 641
DdeI	CTNAG	3 cut(s)	44, 462, 572
DpnI	GATC	3 cut(s)	243, 261, 738
DpnII	GATC	3 cut(s)	241, 259, 736
DraI	TTTAAA	1 cut(s)	751
DriI	GACNNNNNGTC	1 cut(s)	76
EaeI	YGGCCR	1 cut(s)	497
Eam1104I	CTCTTC	1 cut(s)	803
Eam1105I	GACNNNNNGTC	1 cut(s)	76
EarI	CTCTTC	1 cut(s)	803
EciI	GGCGGA	1 cut(s)	70
Ecl136II	GAGCTC	1 cut(s)	383
Eco130I	CCWWGG	1 cut(s)	756
Eco147I	AGGCCT	2 cut(s)	405, 478
Eco24I	GRGCYC	1 cut(s)	385
Eco47I	GGWCC	1 cut(s)	78
Eco53kI	GAGCTC	1 cut(s)	383
Eco81I	CCTNAGG	1 cut(s)	572
EcoICRI	GAGCTC	1 cut(s)	383
EcoRII	CCWGG	1 cut(s)	349
EcoT14I	CCWWGG	1 cut(s)	756
EcoT38I	GRGCYC	1 cut(s)	385
ErhI	CCWWGG	1 cut(s)	756
FaeI	CATG	4 cut(s)	196, 334, 565, 644
FalI	AAGNNNNNCTT	2 cut(s)	249, 281
FaqI	GGGAC	1 cut(s)	41
FatI	CATG	4 cut(s)	192, 330, 561, 640
FauI	CCCGC	2 cut(s)	25, 205
FauNDI	CATATG	1 cut(s)	274
FblI	GTMKAC	1 cut(s)	183
Fnu4HI	GCNGC	8 cut(s)	6, 41, 135, 138, 201, 224, 227, 551
FokI	GGATG	2 cut(s)	62, 430
FriOI	GRGCYC	1 cut(s)	385
Fsp4HI	GCNGC	8 cut(s)	6, 41, 135, 138, 201, 224, 227, 551
FspBI	CTAG	1 cut(s)	374
GlaI	GCGC	1 cut(s)	230
GluI	GCNGC	8 cut(s)	6, 41, 135, 138, 201, 224, 227, 551
GsuI	CTGGAG	2 cut(s)	399, 456
HaeIII	GGCC	5 cut(s)	171, 405, 478, 499, 705
HapII	CCGG	1 cut(s)	84
HgaI	GACGC	3 cut(s)	38, 127, 169
HhaI	GCGC	1 cut(s)	231
Hin1II	CATG	4 cut(s)	196, 334, 565, 644
Hin6I	GCGC	1 cut(s)	229
HinP1I	GCGC	1 cut(s)	229
HinfI	GANTC	1 cut(s)	346
HpaII	CCGG	1 cut(s)	84
Hpy166II	GTNNAC	2 cut(s)	184, 215
Hpy188I	TCNGA	2 cut(s)	103, 698
Hpy188III	TCNNGA	1 cut(s)	571
Hpy8I	GTNNAC	2 cut(s)	184, 215
HpyAV	CCTTC	1 cut(s)	416
HpyCH4III	ACNGT	1 cut(s)	694
HpyCH4V	TGCA	5 cut(s)	62, 269, 278, 334, 533
HpyF10VI	GCNNNNNNNGC	4 cut(s)	177, 275, 530, 707
HpyF3I	CTNAG	3 cut(s)	44, 462, 572
Hsp92II	CATG	4 cut(s)	196, 334, 565, 644
HspAI	GCGC	1 cut(s)	229
KspI	CCGCGG	1 cut(s)	204
Kzo9I	GATC	3 cut(s)	241, 259, 736
LmnI	GCTCC	3 cut(s)	13, 380, 437
Lsp1109I	GCAGC	3 cut(s)	27, 210, 537
LweI	GCATC	3 cut(s)	449, 623, 689
MaeI	CTAG	1 cut(s)	374
MaeIII	GTNAC	1 cut(s)	308
MalI	GATC	3 cut(s)	243, 261, 738
MboI	GATC	3 cut(s)	241, 259, 736
MboII	GAAGA	4 cut(s)	151, 236, 319, 820
MfeI	CAATTG	1 cut(s)	621
MflI	RGATCY	1 cut(s)	736
MhlI	GDGCHC	1 cut(s)	385
MlsI	TGGCCA	1 cut(s)	499
MluCI	AATT	6 cut(s)	296, 357, 468, 556, 621, 819
MluNI	TGGCCA	1 cut(s)	499
MmeI	TCCRAC	2 cut(s)	608, 821
MnlI	CCTC	9 cut(s)	30, 39, 46, 61, 99, 182, 395, 567, 804
Mox20I	TGGCCA	1 cut(s)	499
MscI	TGGCCA	1 cut(s)	499
MseI	TTAA	3 cut(s)	423, 467, 750
MslI	CAYNNNNRTG	1 cut(s)	329
Msp20I	TGGCCA	1 cut(s)	499
MspA1I	CMGCKG	3 cut(s)	115, 203, 434
MspI	CCGG	1 cut(s)	84
MspR9I	CCNGG	1 cut(s)	351
MunI	CAATTG	1 cut(s)	621
MvaI	CCWGG	1 cut(s)	351
MvnI	CGCG	5 cut(s)	32, 121, 134, 203, 229
MwoI	GCNNNNNNNGC	4 cut(s)	177, 275, 530, 707
NdeI	CATATG	1 cut(s)	274
NdeII	GATC	3 cut(s)	241, 259, 736
NheI	GCTAGC	1 cut(s)	373
NlaIII	CATG	4 cut(s)	196, 334, 565, 644
NlaIV	GGNNCC	1 cut(s)	9
NmeAIII	GCCGAG	1 cut(s)	123
NspI	RCATGY	1 cut(s)	565
PceI	AGGCCT	2 cut(s)	405, 478
PfeI	GAWTC	1 cut(s)	346
PfoI	TCCNGGA	1 cut(s)	349
PkrI	GCNGC	8 cut(s)	7, 42, 136, 139, 202, 225, 228, 552
Psp124BI	GAGCTC	1 cut(s)	385
Psp6I	CCWGG	1 cut(s)	349
PspGI	CCWGG	1 cut(s)	349
PspN4I	GGNNCC	1 cut(s)	9
PspPI	GGNCC	2 cut(s)	78, 169
PsuI	RGATCY	1 cut(s)	736
PvuII	CAGCTG	1 cut(s)	434
RseI	CAYNNNNRTG	1 cut(s)	329
SacI	GAGCTC	1 cut(s)	385
SacII	CCGCGG	1 cut(s)	204
SaqAI	TTAA	3 cut(s)	423, 467, 750
SatI	GCNGC	8 cut(s)	6, 41, 135, 138, 201, 224, 227, 551
Sau3AI	GATC	3 cut(s)	241, 259, 736
Sau96I	GGNCC	2 cut(s)	78, 169
ScrFI	CCNGG	1 cut(s)	351
SduI	GDGCHC	1 cut(s)	385
SfaNI	GCATC	3 cut(s)	449, 623, 689
SfcI	CTRYAG	1 cut(s)	429
Sfr303I	CCGCGG	1 cut(s)	204
SgrBI	CCGCGG	1 cut(s)	204
SinI	GGWCC	1 cut(s)	78
SmiMI	CAYNNNNRTG	1 cut(s)	329
SmlI	CTYRAG	3 cut(s)	95, 218, 722
SmoI	CTYRAG	3 cut(s)	95, 218, 722
Sse9I	AATT	6 cut(s)	296, 357, 468, 556, 621, 819
SseBI	AGGCCT	2 cut(s)	405, 478
SspMI	CTAG	1 cut(s)	374
SstI	GAGCTC	1 cut(s)	385
StuI	AGGCCT	2 cut(s)	405, 478
StyD4I	CCNGG	1 cut(s)	349
StyI	CCWWGG	1 cut(s)	756
TaaI	ACNGT	1 cut(s)	694
TasI	AATT	6 cut(s)	296, 357, 468, 556, 621, 819
TauI	GCSGC	5 cut(s)	8, 137, 140, 203, 229
TfiI	GAWTC	1 cut(s)	346
Tru1I	TTAA	3 cut(s)	423, 467, 750
Tru9I	TTAA	3 cut(s)	423, 467, 750
TseI	GCWGC	3 cut(s)	40, 223, 550
TspDTI	ATGAA	3 cut(s)	289, 319, 629
VpaK11BI	GGWCC	1 cut(s)	78
XapI	RAATTY	1 cut(s)	819
XceI	RCATGY	1 cut(s)	565
XmiI	GTMKAC	1 cut(s)	183
XspI	CTAG	1 cut(s)	374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.