Prupe.8G073400_v2.0.a1

GRF zinc finger containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
10718021 .. 10718898
878 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G073400.1

Sequence Viewer

Length: 219 bp
ATGGAGGGTCGACAACGAAAGCATTGCCATTGTGGGAAGCTCTGTCGAGTTCAGACCTCATGGACAGATTCCAACCCAGGTCGAAGGTTTCTAGTCTGCCCACTGGGAAGGAACATAGGTTGTTGTTTCTTTGAGTGGTTTGATCCAGAGATGTGTTCTTGTTCAAAGGATATAATACCTGAGTTGCGGAGAATAGGGAAAGACTGGAACAAGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

73

Amino Acids

8.49

Weight (kDa)

8.92

Isoelectric Point (pI)

55.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 10
AciI CCGC 1 cut(s) 187
AclWI GGATC 1 cut(s) 137
AgsI TTSAA 1 cut(s) 165
AjnI CCWGG 1 cut(s) 76
AluBI AGCT 1 cut(s) 40
AluI AGCT 1 cut(s) 40
AlwI GGATC 1 cut(s) 137
BcgI CGANNNNNNTGC 2 cut(s) 6, 40
BciT130I CCWGG 1 cut(s) 78
BfaI CTAG 2 cut(s) 92, 217
BglII AGATCT 1 cut(s) 213
Bme1390I CCNGG 1 cut(s) 78
BmrFI CCNGG 1 cut(s) 78
BmrI ACTGGG 1 cut(s) 113
BmuI ACTGGG 1 cut(s) 113
BsaJI CCNNGG 1 cut(s) 76
Bse1I ACTGG 2 cut(s) 108, 209
Bse3DI GCAATG 1 cut(s) 22
BseBI CCWGG 1 cut(s) 78
BseDI CCNNGG 1 cut(s) 76
BseMI GCAATG 1 cut(s) 22
BseMII CTCAG 1 cut(s) 171
BseNI ACTGG 2 cut(s) 108, 209
Bsp143I GATC 2 cut(s) 142, 213
BspACI CCGC 1 cut(s) 187
BspCNI CTCAG 1 cut(s) 172
BspPI GGATC 1 cut(s) 137
BsrDI GCAATG 1 cut(s) 22
BsrI ACTGG 2 cut(s) 108, 209
BssECI CCNNGG 1 cut(s) 76
BssMI GATC 2 cut(s) 142, 213
Bst2UI CCWGG 1 cut(s) 78
BstDEI CTNAG 1 cut(s) 180
BstKTI GATC 2 cut(s) 145, 216
BstMBI GATC 2 cut(s) 142, 213
BstNI CCWGG 1 cut(s) 78
BstSCI CCNGG 1 cut(s) 76
BstX2I RGATCY 1 cut(s) 213
BstYI RGATCY 1 cut(s) 213
BtsIMutI CAGTG 1 cut(s) 101
CviAII CATG 1 cut(s) 60
CviJI RGCY 1 cut(s) 40
CviKI_1 RGCY 1 cut(s) 40
DdeI CTNAG 1 cut(s) 180
DpnI GATC 2 cut(s) 144, 215
DpnII GATC 2 cut(s) 142, 213
EcoRII CCWGG 1 cut(s) 76
FaeI CATG 1 cut(s) 63
FaiI YATR 3 cut(s) 61, 116, 173
FatI CATG 1 cut(s) 59
FblI GTMKAC 1 cut(s) 10
FspBI CTAG 2 cut(s) 92, 217
Hin1II CATG 1 cut(s) 63
HincII GTYRAC 1 cut(s) 11
HindII GTYRAC 1 cut(s) 11
HinfI GANTC 1 cut(s) 68
Hpy166II GTNNAC 1 cut(s) 11
Hpy188I TCNGA 1 cut(s) 54
Hpy188III TCNNGA 1 cut(s) 146
Hpy8I GTNNAC 1 cut(s) 11
HpyAV CCTTC 2 cut(s) 78, 102
HpyF3I CTNAG 1 cut(s) 180
Hsp92II CATG 1 cut(s) 63
Kzo9I GATC 2 cut(s) 142, 213
LpnPI CCDG 6 cut(s) 63, 89, 90, 159, 190, 192
MaeI CTAG 2 cut(s) 92, 217
MalI GATC 2 cut(s) 144, 215
MboI GATC 2 cut(s) 142, 213
MflI RGATCY 1 cut(s) 213
MmeI TCCRAC 1 cut(s) 96
MnlI CCTC 1 cut(s) 67
MspR9I CCNGG 1 cut(s) 78
MvaI CCWGG 1 cut(s) 78
NdeII GATC 2 cut(s) 142, 213
NlaIII CATG 1 cut(s) 63
PfeI GAWTC 1 cut(s) 68
Psp6I CCWGG 1 cut(s) 76
PspGI CCWGG 1 cut(s) 76
PsuI RGATCY 1 cut(s) 213
SalI GTCGAC 1 cut(s) 9
Sau3AI GATC 2 cut(s) 142, 213
ScrFI CCNGG 1 cut(s) 78
SetI ASST 6 cut(s) 42, 59, 82, 89, 121, 181
SgeI CNNG 9 cut(s) 59, 72, 89, 90, 104, 116, 158, 171, 191
SsiI CCGC 1 cut(s) 187
SspMI CTAG 2 cut(s) 92, 217
StyD4I CCNGG 1 cut(s) 76
TaqI TCGA 3 cut(s) 10, 46, 82
TfiI GAWTC 1 cut(s) 68
TscAI CASTG 1 cut(s) 108
TspRI CASTG 1 cut(s) 108
XmiI GTMKAC 1 cut(s) 10
XspI CTAG 2 cut(s) 92, 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.