Prupe.8G131800_v2.0.a1

Protein kinase C conserved region 2 (CalB)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
15415364 .. 15418979
3616 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G131800.1

Sequence Viewer

Length: 825 bp
ATGTCAAGATATCGATTTTCATCCCATTATTCGTCTGCACCACCACACTACTCGTTTCCTAACTATTCGTCTATGTCGATTTCTGGTATTCAAGGGCAGCTTCTTGAGGTCACTGTTGTTGCTTGTAACAAGTTGAAGGATACGGAATGGTTTTCACGGCAAGACCCATATGTTTGTCTGGAATATGCTAACACCAAGCACCGTACCAGAACATGCACAGACGGTGGTAAAAACCCTACATTCCAAGAGAAGTTCGTGTTTCCGTTGGTTGAAGGTCTTAGGGAACTGAATGTTCTGGTCTGGAACAGCAATACTGTCACCTTGGACGACTTTATTGGCGAGGGAAAGGTTCAACTTCAGAAGGTTCTTTCACAGGGTTATGATGACAGTGCCTGGACGCTTCAGACTAAAACTGGCAGATATGCAGGAGAAGTGAGGCTAATCATGCATTATGCGAAGACCAATAAACCAACAGCAAGCTATGCTCCATCTGCTCCTCCATATGCAGCACCACATGTACCACAATCTCATCTATATTCAACCCCTCCGCCCCCCGCTCCTTATGGACCACCAGCATCTGGACCTTACCCACCACCACCAGGAGGCTACCCAGCTCCATCTCCCTATCCTTCATATTCACCTAGTTCAGCAGCATATCCACCATCCACGTATGGTCCCCCTCCATCTGCCTATCCTCCCCCACCATACCCACCAACTTCAGCATATCCTCCATCAACGTATCCACCACCTCCACAACCCTCGCCCTATTATCCTCCAGGTAACTTCATTTCTTCTTATGTTTCGTACTTCTTGCTGCCAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

275

Amino Acids

30.14

Weight (kDa)

8.55

Isoelectric Point (pI)

76.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011916)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 578
AccBSI CCGCTC 1 cut(s) 557
AciI CCGC 2 cut(s) 548, 555
AcuI CTGAAG 3 cut(s) 341, 386, 702
AfaI GTAC 3 cut(s) 205, 519, 806
AfiI CCNNNNNNNGG 3 cut(s) 578, 599, 602
AflIII ACRYGT 1 cut(s) 514
AgsI TTSAA 5 cut(s) 92, 136, 272, 353, 540
AjnI CCWGG 3 cut(s) 392, 598, 775
AluBI AGCT 3 cut(s) 100, 480, 614
AluI AGCT 3 cut(s) 100, 480, 614
AlwNI CAGNNNCTG 2 cut(s) 393, 578
ApeKI GCWGC 4 cut(s) 97, 506, 650, 814
AspS9I GGNCC 3 cut(s) 566, 581, 674
AsuHPI GGTGA 2 cut(s) 310, 630
AvaII GGWCC 3 cut(s) 566, 581, 674
BbsI GAAGAC 1 cut(s) 464
BbvI GCAGC 4 cut(s) 109, 518, 662, 801
BccI CCATC 5 cut(s) 496, 625, 670, 691, 739
BceAI ACGGC 1 cut(s) 173
BciT130I CCWGG 3 cut(s) 394, 600, 777
BciVI GTATCC 2 cut(s) 133, 750
BfaI CTAG 1 cut(s) 642
BfuI GTATCC 2 cut(s) 133, 750
BisI GCNGC 4 cut(s) 98, 507, 651, 815
BlsI GCNGC 4 cut(s) 99, 508, 652, 816
Bme1390I CCNGG 3 cut(s) 394, 600, 777
Bme18I GGWCC 3 cut(s) 566, 581, 674
BmgT120I GGNCC 3 cut(s) 566, 581, 674
BmiI GGNNCC 1 cut(s) 676
BmrFI CCNGG 3 cut(s) 394, 600, 777
BmsI GCATC 1 cut(s) 584
BpiI GAAGAC 1 cut(s) 464
BpmI CTGGAG 1 cut(s) 759
BpuEI CTTGAG 1 cut(s) 125
Bsa29I ATCGAT 1 cut(s) 13
BsaAI YACGTR 1 cut(s) 669
BsaBI GATNNNNATC 1 cut(s) 19
BsaJI CCNNGG 1 cut(s) 321
Bsc4I CCNNNNNNNGG 3 cut(s) 578, 599, 602
Bse1I ACTGG 1 cut(s) 418
Bse8I GATNNNNATC 1 cut(s) 19
BseBI CCWGG 3 cut(s) 394, 600, 777
BseCI ATCGAT 1 cut(s) 13
BseDI CCNNGG 1 cut(s) 321
BseGI GGATG 2 cut(s) 20, 662
BseJI GATNNNNATC 1 cut(s) 19
BseLI CCNNNNNNNGG 3 cut(s) 578, 599, 602
BseNI ACTGG 1 cut(s) 418
BseRI GAGGAG 1 cut(s) 486
BseXI GCAGC 4 cut(s) 109, 518, 662, 801
BseYI CCCAGC 1 cut(s) 610
BsgI GTGCAG 1 cut(s) 21
BshVI ATCGAT 1 cut(s) 13
BslFI GGGAC 1 cut(s) 660
BslI CCNNNNNNNGG 3 cut(s) 578, 599, 602
BsmFI GGGAC 1 cut(s) 660
BspACI CCGC 2 cut(s) 548, 555
BspDI ATCGAT 1 cut(s) 13
BspLI GGNNCC 1 cut(s) 676
BsrBI CCGCTC 1 cut(s) 557
BsrI ACTGG 1 cut(s) 418
BssECI CCNNGG 1 cut(s) 321
BssT1I CCWWGG 1 cut(s) 321
Bst2UI CCWGG 3 cut(s) 394, 600, 777
Bst4CI ACNGT 5 cut(s) 115, 203, 224, 316, 389
BstAPI GCANNNNNTGC 1 cut(s) 482
BstBAI YACGTR 1 cut(s) 669
BstC8I GCNNGC 1 cut(s) 478
BstDEI CTNAG 1 cut(s) 278
BstF5I GGATG 2 cut(s) 20, 662
BstMWI GCNNNNNNNGC 3 cut(s) 445, 482, 491
BstNI CCWGG 3 cut(s) 394, 600, 777
BstNSI RCATGY 2 cut(s) 216, 518
BstSCI CCNGG 3 cut(s) 392, 598, 775
BstV1I GCAGC 4 cut(s) 109, 518, 662, 801
BstV2I GAAGAC 1 cut(s) 464
Bsu15I ATCGAT 1 cut(s) 13
BsuI GTATCC 2 cut(s) 133, 750
BsuTUI ATCGAT 1 cut(s) 13
BtsCI GGATG 2 cut(s) 20, 662
BtsIMutI CAGTG 2 cut(s) 111, 394
Cac8I GCNNGC 1 cut(s) 478
CaiI CAGNNNCTG 2 cut(s) 393, 578
Cfr13I GGNCC 3 cut(s) 566, 581, 674
ClaI ATCGAT 1 cut(s) 13
CseI GACGC 1 cut(s) 406
Csp6I GTAC 3 cut(s) 204, 518, 805
CviAII CATG 3 cut(s) 213, 445, 515
CviJI RGCY 5 cut(s) 100, 439, 480, 606, 614
CviKI_1 RGCY 5 cut(s) 100, 439, 480, 606, 614
CviQI GTAC 3 cut(s) 204, 518, 805
DdeI CTNAG 1 cut(s) 278
EciI GGCGGA 1 cut(s) 537
Eco130I CCWWGG 1 cut(s) 321
Eco32I GATATC 1 cut(s) 11
Eco47I GGWCC 3 cut(s) 566, 581, 674
Eco57I CTGAAG 3 cut(s) 341, 386, 702
EcoRII CCWGG 3 cut(s) 392, 598, 775
EcoRV GATATC 1 cut(s) 11
EcoT14I CCWWGG 1 cut(s) 321
EcoT22I ATGCAT 1 cut(s) 450
ErhI CCWWGG 1 cut(s) 321
FaeI CATG 3 cut(s) 216, 448, 518
FalI AAGNNNNNCTT 2 cut(s) 84, 116
FaqI GGGAC 1 cut(s) 660
FatI CATG 3 cut(s) 212, 444, 514
FauI CCCGC 1 cut(s) 562
FauNDI CATATG 2 cut(s) 169, 502
Fnu4HI GCNGC 4 cut(s) 98, 507, 651, 815
FokI GGATG 2 cut(s) 7, 649
Fsp4HI GCNGC 4 cut(s) 98, 507, 651, 815
FspBI CTAG 1 cut(s) 642
GluI GCNGC 4 cut(s) 98, 507, 651, 815
GsaI CCCAGC 1 cut(s) 614
GsuI CTGGAG 1 cut(s) 759
HgaI GACGC 1 cut(s) 406
Hin1II CATG 3 cut(s) 216, 448, 518
HphI GGTGA 2 cut(s) 310, 630
Hpy188I TCNGA 2 cut(s) 360, 405
Hpy188III TCNNGA 5 cut(s) 6, 104, 179, 301, 579
HpyAV CCTTC 4 cut(s) 130, 266, 355, 639
HpyCH4III ACNGT 5 cut(s) 115, 203, 224, 316, 389
HpyCH4IV ACGT 2 cut(s) 668, 737
HpyCH4V TGCA 5 cut(s) 38, 216, 425, 448, 506
HpyF10VI GCNNNNNNNGC 3 cut(s) 445, 482, 491
HpyF3I CTNAG 1 cut(s) 278
HpySE526I ACGT 2 cut(s) 668, 737
Hsp92II CATG 3 cut(s) 216, 448, 518
LmnI GCTCC 4 cut(s) 490, 499, 562, 619
Lsp1109I GCAGC 4 cut(s) 109, 518, 662, 801
LweI GCATC 1 cut(s) 584
MaeI CTAG 1 cut(s) 642
MaeII ACGT 2 cut(s) 668, 737
MaeIII GTNAC 4 cut(s) 109, 125, 316, 779
MbiI CCGCTC 1 cut(s) 557
MboII GAAGA 2 cut(s) 469, 783
Mph1103I ATGCAT 1 cut(s) 450
MspR9I CCNGG 3 cut(s) 394, 600, 777
MvaI CCWGG 3 cut(s) 394, 600, 777
MwoI GCNNNNNNNGC 3 cut(s) 445, 482, 491
NdeI CATATG 2 cut(s) 169, 502
NlaIII CATG 3 cut(s) 216, 448, 518
NlaIV GGNNCC 1 cut(s) 676
NmuCI GTSAC 2 cut(s) 109, 316
NsiI ATGCAT 1 cut(s) 450
NspI RCATGY 2 cut(s) 216, 518
PciI ACATGT 1 cut(s) 514
PcsI WCGNNNNNNNCGW 1 cut(s) 74
PflMI CCANNNNNTGG 1 cut(s) 578
PkrI GCNGC 4 cut(s) 99, 508, 652, 816
Ppu21I YACGTR 1 cut(s) 669
PscI ACATGT 1 cut(s) 514
Psp6I CCWGG 3 cut(s) 392, 598, 775
PspFI CCCAGC 1 cut(s) 610
PspGI CCWGG 3 cut(s) 392, 598, 775
PspN4I GGNNCC 1 cut(s) 676
PspPI GGNCC 3 cut(s) 566, 581, 674
PstNI CAGNNNCTG 2 cut(s) 393, 578
RsaI GTAC 3 cut(s) 205, 519, 806
RsaNI GTAC 3 cut(s) 204, 518, 805
SatI GCNGC 4 cut(s) 98, 507, 651, 815
Sau96I GGNCC 3 cut(s) 566, 581, 674
ScrFI CCNGG 3 cut(s) 394, 600, 777
SfaNI GCATC 1 cut(s) 584
SinI GGWCC 3 cut(s) 566, 581, 674
SmlI CTYRAG 1 cut(s) 104
SmoI CTYRAG 1 cut(s) 104
SsiI CCGC 2 cut(s) 548, 555
SspMI CTAG 1 cut(s) 642
StyD4I CCNGG 3 cut(s) 392, 598, 775
StyI CCWWGG 1 cut(s) 321
TaaI ACNGT 5 cut(s) 115, 203, 224, 316, 389
TaiI ACGT 2 cut(s) 671, 740
TaqI TCGA 2 cut(s) 13, 77
TscAI CASTG 2 cut(s) 118, 394
TseFI GTSAC 2 cut(s) 109, 316
TseI GCWGC 4 cut(s) 97, 506, 650, 814
Tsp45I GTSAC 2 cut(s) 109, 316
TspDTI ATGAA 3 cut(s) 9, 621, 775
TspGWI ACGGA 2 cut(s) 158, 252
TspRI CASTG 2 cut(s) 118, 394
Van91I CCANNNNNTGG 1 cut(s) 578
VpaK11BI GGWCC 3 cut(s) 566, 581, 674
XceI RCATGY 2 cut(s) 216, 518
XspI CTAG 1 cut(s) 642
Zsp2I ATGCAT 1 cut(s) 450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.