Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009180

Physical Location & Seq

Genomic Coordinates Forward (+)

15910847 .. 15914057

Gene Structure 3211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G141400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 603 bp

ATGTCGGAGCATCCATTGCAGGCACTGTTTCAAACTGTTGCGAAAGTCTCAAATTCAATTCAAGCCCAACTTTCTAATCTCATTGGCCAACCTCACCACTCCTCTCCCACAACCCAAACACGCCTTTTCTCTGTCTCTTCCTCCTCCAAAGTACGTTCGTCAGAAAATGTCTCCACCCATCCCCAGCCCACCGATCTCATCAACAAGAAAAAGGGAAATTCGGCTAGTCCTTTGACTAAAGAAGAGCTTGGAAGAGCCACTTGGACTTTTCTTCACACTCTTGCTGCTCAGTATCCAGATAAACCAACAAGGCAACAGAAGAAGGATGCAAAAGAATTGATGTCAATATTATCACGAATGTACCCCTGCAAGGAATGCGCAGATCACTTTCAAGAAATTCTCAGATCAAATCCTGTACAGGCTGGATCACATGCTGAATTCTCCCAATGGCTATGTCACGTGCATAATACAGTTAACAGAAGCCTTAGCAAACCGGTTTTCCCCTGTGAGCGAGTTGATGCAAGGTGGGGCAAGTTAGAGTGTGAGCAGCGTGCTTGCGATCTACTAGGACTTACTTCAGGATTTGAAGACAAAATGTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008150 GO:0008152 GO:0015035 GO:0015036 GO:0016491 GO:0016667 GO:0016670 GO:0016971 GO:0016972 GO:0036094 GO:0042802 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Evr1_Alr

Protein Analysis

201

Amino Acids

22.49

Weight (kDa)

8.92

Isoelectric Point (pI)

61.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009180)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49880 AT1G49880
fragaria_vesca	FvH4_2g03990
malus_domestica	MD05G1097000.v1.1 MD10G1103100.v1.1
prunus_persica	Prupe.8G141400_v2.0.a1 Prupe.8G141400_v2.0.a1
pyrus_communis	pycom10g08880
rosa_chinensis	RchiOBHm_Chr6g0253041 RchiOBHm_Chr6g0253051 RchiOBHm_Chr6g0253221
rosa_multiflora	Rmu_sc0003898.1_g000002
rosa_roxburghii	Rroxscaffold_7G00212170
rosa_rugosa	Rorug05G0542900 Rorug05G0542900
rosa_samantha	Rh6AG057000 Rh6AG057700 Rh6BG051600 Rh6CG049400 Rh6DG045100 Rh6DG045300
rosa_wichuraiana	Rw6G005210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	379
AclWI	GGATC	1 cut(s)	433
AcoI	YGGCCR	1 cut(s)	85
AcsI	RAATTY	4 cut(s)	52, 217, 396, 437
AcuI	CTGAAG	1 cut(s)	561
AcvI	CACGTG	1 cut(s)	460
AfaI	GTAC	3 cut(s)	153, 362, 417
AfiI	CCNNNNNNNGG	1 cut(s)	370
AgeI	ACCGGT	1 cut(s)	493
AgsI	TTSAA	5 cut(s)	32, 57, 62, 392, 587
AjuI	GAANNNNNNNTTGG	2 cut(s)	244, 276
AluBI	AGCT	1 cut(s)	247
AluI	AGCT	1 cut(s)	247
Alw26I	GTCTC	3 cut(s)	52, 139, 175
AlwI	GGATC	1 cut(s)	433
AlwNI	CAGNNNCTG	1 cut(s)	25
AoxI	GGCC	1 cut(s)	85
ApeKI	GCWGC	2 cut(s)	284, 547
ApoI	RAATTY	4 cut(s)	52, 217, 396, 437
AsiGI	ACCGGT	1 cut(s)	493
AspLEI	GCGC	1 cut(s)	380
AsuHPI	GGTGA	1 cut(s)	86
BaeI	ACNNNNGTAYC	2 cut(s)	344, 377
BalI	TGGCCA	1 cut(s)	87
BbrPI	CACGTG	1 cut(s)	460
BbsI	GAAGAC	1 cut(s)	594
BbvI	GCAGC	2 cut(s)	271, 559
BccI	CCATC	1 cut(s)	186
BciVI	GTATCC	1 cut(s)	303
BcoDI	GTCTC	3 cut(s)	52, 139, 175
BfaI	CTAG	2 cut(s)	225, 566
BfuI	GTATCC	1 cut(s)	303
BisI	GCNGC	2 cut(s)	285, 548
BlsI	GCNGC	2 cut(s)	286, 549
BmsI	GCATC	3 cut(s)	19, 316, 508
BpiI	GAAGAC	1 cut(s)	594
Bpu10I	CCTNAGC	1 cut(s)	485
BsaAI	YACGTR	1 cut(s)	460
BsaWI	WCCGGW	1 cut(s)	493
Bsc4I	CCNNNNNNNGG	1 cut(s)	370
Bse118I	RCCGGY	1 cut(s)	493
Bse3DI	GCAATG	1 cut(s)	14
BseGI	GGATG	3 cut(s)	10, 178, 331
BseLI	CCNNNNNNNGG	1 cut(s)	370
BseMI	GCAATG	1 cut(s)	14
BseMII	CTCAG	2 cut(s)	302, 415
BseRI	GAGGAG	2 cut(s)	91, 133
BseXI	GCAGC	2 cut(s)	271, 559
BseYI	CCCAGC	1 cut(s)	183
BshFI	GGCC	1 cut(s)	87
BshTI	ACCGGT	1 cut(s)	493
BsiSI	CCGG	1 cut(s)	494
BslI	CCNNNNNNNGG	1 cut(s)	370
BsmAI	GTCTC	3 cut(s)	52, 139, 175
BsmI	GAATGC	1 cut(s)	380
BsnI	GGCC	1 cut(s)	87
Bsp1407I	TGTACA	1 cut(s)	415
Bsp143I	GATC	5 cut(s)	193, 382, 404, 425, 559
BspANI	GGCC	1 cut(s)	87
BspCNI	CTCAG	2 cut(s)	301, 414
BspPI	GGATC	1 cut(s)	433
BspQI	GCTCTTC	2 cut(s)	237, 247
BsrDI	GCAATG	1 cut(s)	14
BsrFI	RCCGGY	1 cut(s)	493
BsrGI	TGTACA	1 cut(s)	415
BssAI	RCCGGY	1 cut(s)	493
BssMI	GATC	5 cut(s)	193, 382, 404, 425, 559
Bst4CI	ACNGT	3 cut(s)	27, 37, 472
Bst6I	CTCTTC	3 cut(s)	142, 237, 247
BstAPI	GCANNNNNTGC	2 cut(s)	16, 375
BstAUI	TGTACA	1 cut(s)	415
BstBAI	YACGTR	1 cut(s)	460
BstC8I	GCNNGC	3 cut(s)	21, 552, 556
BstDEI	CTNAG	3 cut(s)	288, 401, 485
BstF5I	GGATG	3 cut(s)	10, 178, 331
BstHHI	GCGC	1 cut(s)	380
BstKTI	GATC	5 cut(s)	196, 385, 407, 428, 562
BstMAI	GTCTC	3 cut(s)	52, 139, 175
BstMBI	GATC	5 cut(s)	193, 382, 404, 425, 559
BstMWI	GCNNNNNNNGC	2 cut(s)	16, 375
BstNSI	RCATGY	1 cut(s)	434
BstV1I	GCAGC	2 cut(s)	271, 559
BstV2I	GAAGAC	1 cut(s)	594
BsuI	GTATCC	1 cut(s)	303
BsuRI	GGCC	1 cut(s)	87
BtsCI	GGATG	3 cut(s)	10, 178, 331
BtsIMutI	CAGTG	1 cut(s)	23
Cac8I	GCNNGC	3 cut(s)	21, 552, 556
CaiI	CAGNNNCTG	1 cut(s)	25
CfoI	GCGC	1 cut(s)	380
Cfr10I	RCCGGY	1 cut(s)	493
Csp6I	GTAC	3 cut(s)	152, 361, 416
CspAI	ACCGGT	1 cut(s)	493
CviAII	CATG	1 cut(s)	431
CviJI	RGCY	9 cut(s)	65, 87, 187, 224, 247, 257, 422, 451, 483
CviKI_1	RGCY	9 cut(s)	65, 87, 187, 224, 247, 257, 422, 451, 483
CviQI	GTAC	3 cut(s)	152, 361, 416
DdeI	CTNAG	3 cut(s)	288, 401, 485
DpnI	GATC	5 cut(s)	195, 384, 406, 427, 561
DpnII	GATC	5 cut(s)	193, 382, 404, 425, 559
EaeI	YGGCCR	1 cut(s)	85
Eam1104I	CTCTTC	3 cut(s)	142, 237, 247
EarI	CTCTTC	3 cut(s)	142, 237, 247
Eco57I	CTGAAG	1 cut(s)	561
Eco72I	CACGTG	1 cut(s)	460
EcoRI	GAATTC	1 cut(s)	437
FaeI	CATG	1 cut(s)	434
FaiI	YATR	3 cut(s)	432, 454, 465
FalI	AAGNNNNNCTT	6 cut(s)	54, 86, 231, 263, 244, 276
FatI	CATG	1 cut(s)	430
Fnu4HI	GCNGC	2 cut(s)	285, 548
FokI	GGATG	2 cut(s)	165, 338
Fsp4HI	GCNGC	2 cut(s)	285, 548
FspBI	CTAG	2 cut(s)	225, 566
FspI	TGCGCA	1 cut(s)	379
GlaI	GCGC	1 cut(s)	379
GluI	GCNGC	2 cut(s)	285, 548
GsaI	CCCAGC	1 cut(s)	187
HaeIII	GGCC	1 cut(s)	87
HapII	CCGG	1 cut(s)	494
HhaI	GCGC	1 cut(s)	380
Hin1II	CATG	1 cut(s)	434
Hin6I	GCGC	1 cut(s)	378
HinP1I	GCGC	1 cut(s)	378
HincII	GTYRAC	1 cut(s)	475
HindII	GTYRAC	1 cut(s)	475
HpaI	GTTAAC	1 cut(s)	475
HpaII	CCGG	1 cut(s)	494
HphI	GGTGA	1 cut(s)	86
Hpy166II	GTNNAC	1 cut(s)	475
Hpy188I	TCNGA	3 cut(s)	7, 163, 404
Hpy188III	TCNNGA	4 cut(s)	296, 354, 392, 579
Hpy8I	GTNNAC	1 cut(s)	475
HpyAV	CCTTC	1 cut(s)	316
HpyCH4III	ACNGT	3 cut(s)	27, 37, 472
HpyCH4IV	ACGT	2 cut(s)	154, 459
HpyCH4V	TGCA	5 cut(s)	19, 329, 369, 463, 521
HpyF10VI	GCNNNNNNNGC	2 cut(s)	16, 375
HpyF3I	CTNAG	3 cut(s)	288, 401, 485
HpySE526I	ACGT	2 cut(s)	154, 459
Hsp92II	CATG	1 cut(s)	434
HspAI	GCGC	1 cut(s)	378
KspAI	GTTAAC	1 cut(s)	475
Kzo9I	GATC	5 cut(s)	193, 382, 404, 425, 559
LguI	GCTCTTC	2 cut(s)	237, 247
LmnI	GCTCC	1 cut(s)	7
Lsp1109I	GCAGC	2 cut(s)	271, 559
LweI	GCATC	3 cut(s)	19, 316, 508
MaeI	CTAG	2 cut(s)	225, 566
MaeII	ACGT	2 cut(s)	154, 459
MaeIII	GTNAC	1 cut(s)	455
MalI	GATC	5 cut(s)	195, 384, 406, 427, 561
MboI	GATC	5 cut(s)	193, 382, 404, 425, 559
MboII	GAAGA	6 cut(s)	129, 254, 263, 264, 331, 599
MlsI	TGGCCA	1 cut(s)	87
MluCI	AATT	6 cut(s)	52, 57, 217, 335, 396, 437
MluNI	TGGCCA	1 cut(s)	87
MnlI	CCTC	4 cut(s)	102, 112, 151, 154
Mox20I	TGGCCA	1 cut(s)	87
MscI	TGGCCA	1 cut(s)	87
MseI	TTAA	2 cut(s)	474, 601
Msp20I	TGGCCA	1 cut(s)	87
MspI	CCGG	1 cut(s)	494
Mva1269I	GAATGC	1 cut(s)	380
MwoI	GCNNNNNNNGC	2 cut(s)	16, 375
NdeII	GATC	5 cut(s)	193, 382, 404, 425, 559
NlaIII	CATG	1 cut(s)	434
NmuCI	GTSAC	1 cut(s)	455
NsbI	TGCGCA	1 cut(s)	379
NspI	RCATGY	1 cut(s)	434
PciSI	GCTCTTC	2 cut(s)	237, 247
PctI	GAATGC	1 cut(s)	380
PinAI	ACCGGT	1 cut(s)	493
PkrI	GCNGC	2 cut(s)	286, 549
PmaCI	CACGTG	1 cut(s)	460
PmlI	CACGTG	1 cut(s)	460
Ppu21I	YACGTR	1 cut(s)	460
PspCI	CACGTG	1 cut(s)	460
PspFI	CCCAGC	1 cut(s)	183
PstNI	CAGNNNCTG	1 cut(s)	25
RsaI	GTAC	3 cut(s)	153, 362, 417
RsaNI	GTAC	3 cut(s)	152, 361, 416
SapI	GCTCTTC	2 cut(s)	237, 247
SaqAI	TTAA	2 cut(s)	474, 601
SatI	GCNGC	2 cut(s)	285, 548
Sau3AI	GATC	5 cut(s)	193, 382, 404, 425, 559
SetI	ASST	5 cut(s)	94, 157, 249, 462, 527
SfaNI	GCATC	3 cut(s)	19, 316, 508
Sse9I	AATT	6 cut(s)	52, 57, 217, 335, 396, 437
SspI	AATATT	1 cut(s)	348
SspMI	CTAG	2 cut(s)	225, 566
TaaI	ACNGT	3 cut(s)	27, 37, 472
TaiI	ACGT	2 cut(s)	157, 462
TasI	AATT	6 cut(s)	52, 57, 217, 335, 396, 437
TatI	WGTACW	1 cut(s)	415
Tru1I	TTAA	2 cut(s)	474, 601
Tru9I	TTAA	2 cut(s)	474, 601
TscAI	CASTG	1 cut(s)	30
TseFI	GTSAC	1 cut(s)	455
TseI	GCWGC	2 cut(s)	284, 547
Tsp45I	GTSAC	1 cut(s)	455
TspRI	CASTG	1 cut(s)	30
XapI	RAATTY	4 cut(s)	52, 217, 396, 437
XceI	RCATGY	1 cut(s)	434
XspI	CTAG	2 cut(s)	225, 566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.