Rh6AG057700

sulfhydryl oxidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0009180
Physical Location & Seq
Forward (+)
8418164 .. 8419660
1497 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG057700.1

Sequence Viewer

Length: 278 bp
ATGTCAGCTGGGAAATTGGCTGGTCCTGTGACGAAAGAAGGGCTCGGAAGATCCACTTGGACTTTTCTTCACACTCTTGCTGCTCAGTATCCAGATAATCCAATGAGGCAACAGAAGAAGGACGTAAAAGAATTGATGTCAATATTATCACGAATGTACCCCTGCAAGGAATGTGCAGATCATTTTCAAGAAATTCTAAGATCTAATCCTGTACAGGCTGGATCTCATGCTGAATTCTCCCAGTGGCTATGTCATGTGCATAATATTGTTAACAGAAG

Protein Analysis

92

Amino Acids

10.47

Weight (kDa)

8.93

Isoelectric Point (pI)

60.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Evr1_Alr PF04777 17 - 92 7.7e-29 Erv1 / Alr family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 45, 229
AcsI RAATTY 2 cut(s) 192, 233
AfaI GTAC 2 cut(s) 158, 213
AfiI CCNNNNNNNGG 1 cut(s) 166
AgsI TTSAA 1 cut(s) 188
AjuI GAANNNNNNNTTGG 2 cut(s) 40, 72
AluBI AGCT 1 cut(s) 8
AluI AGCT 1 cut(s) 8
AlwI GGATC 2 cut(s) 45, 229
ApeKI GCWGC 1 cut(s) 80
ApoI RAATTY 2 cut(s) 192, 233
AspS9I GGNCC 1 cut(s) 23
AvaII GGWCC 1 cut(s) 23
BaeI ACNNNNGTAYC 2 cut(s) 140, 173
BanII GRGCYC 1 cut(s) 45
BbvI GCAGC 1 cut(s) 67
BciVI GTATCC 1 cut(s) 99
BfuI GTATCC 1 cut(s) 99
BglII AGATCT 1 cut(s) 200
BisI GCNGC 1 cut(s) 81
BlsI GCNGC 1 cut(s) 82
Bme18I GGWCC 1 cut(s) 23
BmgT120I GGNCC 1 cut(s) 23
BmrI ACTGGG 1 cut(s) 235
BmuI ACTGGG 1 cut(s) 235
Bsc4I CCNNNNNNNGG 1 cut(s) 166
Bse1I ACTGG 1 cut(s) 241
BseLI CCNNNNNNNGG 1 cut(s) 166
BseMII CTCAG 1 cut(s) 98
BseNI ACTGG 1 cut(s) 241
BseXI GCAGC 1 cut(s) 67
BseYI CCCAGC 1 cut(s) 8
BsgI GTGCAG 1 cut(s) 195
BslI CCNNNNNNNGG 1 cut(s) 166
Bsp1286I GDGCHC 1 cut(s) 45
Bsp1407I TGTACA 1 cut(s) 211
Bsp143I GATC 4 cut(s) 50, 178, 200, 221
BspCNI CTCAG 1 cut(s) 97
BspPI GGATC 2 cut(s) 45, 229
BsrGI TGTACA 1 cut(s) 211
BsrI ACTGG 1 cut(s) 241
BssMI GATC 4 cut(s) 50, 178, 200, 221
BstAUI TGTACA 1 cut(s) 211
BstDEI CTNAG 2 cut(s) 84, 197
BstKTI GATC 4 cut(s) 53, 181, 203, 224
BstMBI GATC 4 cut(s) 50, 178, 200, 221
BstV1I GCAGC 1 cut(s) 67
BstX2I RGATCY 3 cut(s) 50, 200, 221
BstYI RGATCY 3 cut(s) 50, 200, 221
BsuI GTATCC 1 cut(s) 99
BtsIMutI CAGTG 1 cut(s) 248
Cfr13I GGNCC 1 cut(s) 23
Csp6I GTAC 2 cut(s) 157, 212
CviAII CATG 2 cut(s) 227, 254
CviJI RGCY 5 cut(s) 8, 20, 43, 218, 247
CviKI_1 RGCY 5 cut(s) 8, 20, 43, 218, 247
CviQI GTAC 2 cut(s) 157, 212
DdeI CTNAG 2 cut(s) 84, 197
DpnI GATC 4 cut(s) 52, 180, 202, 223
DpnII GATC 4 cut(s) 50, 178, 200, 221
Eco24I GRGCYC 1 cut(s) 45
Eco47I GGWCC 1 cut(s) 23
EcoRI GAATTC 1 cut(s) 233
EcoT38I GRGCYC 1 cut(s) 45
FaeI CATG 2 cut(s) 230, 257
FaiI YATR 4 cut(s) 228, 250, 255, 261
FalI AAGNNNNNCTT 2 cut(s) 40, 72
FatI CATG 2 cut(s) 226, 253
Fnu4HI GCNGC 1 cut(s) 81
FriOI GRGCYC 1 cut(s) 45
Fsp4HI GCNGC 1 cut(s) 81
GluI GCNGC 1 cut(s) 81
GsaI CCCAGC 1 cut(s) 12
Hin1II CATG 2 cut(s) 230, 257
HincII GTYRAC 1 cut(s) 271
HindII GTYRAC 1 cut(s) 271
HpaI GTTAAC 1 cut(s) 271
Hpy166II GTNNAC 1 cut(s) 271
Hpy188I TCNGA 1 cut(s) 47
Hpy188III TCNNGA 3 cut(s) 92, 150, 188
Hpy8I GTNNAC 1 cut(s) 271
HpyAV CCTTC 2 cut(s) 32, 112
HpyCH4IV ACGT 1 cut(s) 123
HpyCH4V TGCA 3 cut(s) 165, 176, 259
HpyF3I CTNAG 2 cut(s) 84, 197
HpySE526I ACGT 1 cut(s) 123
Hsp92II CATG 2 cut(s) 230, 257
KspAI GTTAAC 1 cut(s) 271
Kzo9I GATC 4 cut(s) 50, 178, 200, 221
LpnPI CCDG 8 cut(s) 6, 39, 105, 175, 200, 204, 222, 254
Lsp1109I GCAGC 1 cut(s) 67
MaeII ACGT 1 cut(s) 123
MaeIII GTNAC 1 cut(s) 28
MalI GATC 4 cut(s) 52, 180, 202, 223
MboI GATC 4 cut(s) 50, 178, 200, 221
MboII GAAGA 3 cut(s) 59, 60, 127
MflI RGATCY 3 cut(s) 50, 200, 221
MhlI GDGCHC 1 cut(s) 45
MluCI AATT 4 cut(s) 14, 131, 192, 233
MnlI CCTC 1 cut(s) 99
MseI TTAA 1 cut(s) 270
MspA1I CMGCKG 1 cut(s) 8
NdeII GATC 4 cut(s) 50, 178, 200, 221
NlaIII CATG 2 cut(s) 230, 257
NmuCI GTSAC 1 cut(s) 28
PkrI GCNGC 1 cut(s) 82
PspFI CCCAGC 1 cut(s) 8
PspPI GGNCC 1 cut(s) 23
PsuI RGATCY 3 cut(s) 50, 200, 221
PvuII CAGCTG 1 cut(s) 8
RsaI GTAC 2 cut(s) 158, 213
RsaNI GTAC 2 cut(s) 157, 212
SaqAI TTAA 1 cut(s) 270
SatI GCNGC 1 cut(s) 81
Sau3AI GATC 4 cut(s) 50, 178, 200, 221
Sau96I GGNCC 1 cut(s) 23
SduI GDGCHC 1 cut(s) 45
SetI ASST 2 cut(s) 10, 126
SinI GGWCC 1 cut(s) 23
Sse9I AATT 4 cut(s) 14, 131, 192, 233
SspI AATATT 2 cut(s) 144, 265
TaiI ACGT 1 cut(s) 126
TasI AATT 4 cut(s) 14, 131, 192, 233
TatI WGTACW 1 cut(s) 211
Tru1I TTAA 1 cut(s) 270
Tru9I TTAA 1 cut(s) 270
TscAI CASTG 1 cut(s) 248
TseFI GTSAC 1 cut(s) 28
TseI GCWGC 1 cut(s) 80
Tsp45I GTSAC 1 cut(s) 28
TspRI CASTG 1 cut(s) 248
VpaK11BI GGWCC 1 cut(s) 23
XapI RAATTY 2 cut(s) 192, 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.