Zinc finger, C3HC4 type (RING finger)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G25030 AT3G25030 AT3G25030 AT3G25030 AT4G03965 AT4G13100 AT4G13100 AT4G13100 AT4G13100 AT4G13100 AT4G13100 AT4G13100 AT4G13100 AT4G13100 AT4G22250 |
| fragaria_vesca | FvH4_2g18810 |
| malus_domestica | MD05G1174100.v1.1 MD10G1163000.v1.1 |
| prunus_persica | Prupe.8G201500_v2.0.a1 Prupe.8G201500_v2.0.a1 |
| pyrus_communis | pycom05g16090 |
| rosa_chinensis | RchiOBHm_Chr6g0284561 |
| rosa_laevigata | RLG00000012738 |
| rosa_multiflora | Rmu_sc0001246.1_g000002 Rmu_sc0001246.1_g000003 Rmu_sc0005257.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00184620 |
| rosa_rugosa | Rorug06G0164200 |
| rosa_samantha | Rh6BG277300 Rh6CG279500 Rh6DG271900 |
| rosa_wichuraiana | Rw6G023820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 54 |
| AccB1I | GGYRCC | 1 cut(s) | 523 |
| AccBSI | CCGCTC | 1 cut(s) | 719 |
| AccI | GTMKAC | 2 cut(s) | 402, 602 |
| AccII | CGCG | 9 cut(s) | 231, 233, 261, 343, 419, 439, 470, 518, 520 |
| AccIII | TCCGGA | 1 cut(s) | 285 |
| AcoI | YGGCCR | 3 cut(s) | 561, 660, 690 |
| AcsI | RAATTY | 1 cut(s) | 1068 |
| AcyI | GRCGYC | 3 cut(s) | 51, 524, 686 |
| AfaI | GTAC | 2 cut(s) | 763, 878 |
| AfeI | AGCGCT | 1 cut(s) | 609 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 271, 594, 811 |
| AflIII | ACRYGT | 2 cut(s) | 468, 990 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 736 |
| AjiI | CACGTC | 2 cut(s) | 270, 733 |
| AjnI | CCWGG | 2 cut(s) | 42, 194 |
| AluBI | AGCT | 4 cut(s) | 32, 351, 447, 1018 |
| AluI | AGCT | 4 cut(s) | 32, 351, 447, 1018 |
| Alw21I | GWGCWC | 3 cut(s) | 449, 1010, 1020 |
| Alw26I | GTCTC | 4 cut(s) | 18, 135, 368, 809 |
| Ama87I | CYCGRG | 2 cut(s) | 112, 371 |
| Aor13HI | TCCGGA | 1 cut(s) | 285 |
| Aor51HI | AGCGCT | 1 cut(s) | 609 |
| AoxI | GGCC | 8 cut(s) | 60, 165, 246, 460, 561, 660, 669, 690 |
| ApaI | GGGCCC | 1 cut(s) | 169 |
| ApeKI | GCWGC | 7 cut(s) | 68, 348, 674, 680, 755, 939, 968 |
| ApoI | RAATTY | 1 cut(s) | 1068 |
| AspLEI | GCGC | 7 cut(s) | 233, 441, 520, 526, 610, 655, 724 |
| AspS9I | GGNCC | 7 cut(s) | 61, 165, 166, 246, 461, 576, 802 |
| AsuC2I | CCSGG | 3 cut(s) | 164, 454, 589 |
| AsuHPI | GGTGA | 4 cut(s) | 305, 317, 323, 796 |
| AvaI | CYCGRG | 2 cut(s) | 112, 371 |
| AvaII | GGWCC | 2 cut(s) | 576, 802 |
| BaeGI | GKGCMC | 1 cut(s) | 169 |
| BanI | GGYRCC | 1 cut(s) | 523 |
| BanII | GRGCYC | 6 cut(s) | 153, 169, 239, 449, 492, 1020 |
| Bbv12I | GWGCWC | 3 cut(s) | 449, 1010, 1020 |
| BbvCI | CCTCAGC | 1 cut(s) | 666 |
| BbvI | GCAGC | 7 cut(s) | 80, 360, 686, 692, 767, 926, 955 |
| BccI | CCATC | 3 cut(s) | 116, 793, 823 |
| BceAI | ACGGC | 2 cut(s) | 576, 721 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 669, 703 |
| BciT130I | CCWGG | 2 cut(s) | 44, 196 |
| BcnI | CCSGG | 3 cut(s) | 164, 454, 589 |
| BcoDI | GTCTC | 4 cut(s) | 18, 135, 368, 809 |
| BfmI | CTRYAG | 1 cut(s) | 66 |
| BfoI | RGCGCY | 2 cut(s) | 527, 611 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 668, 683, 698 |
| Bme1390I | CCNGG | 5 cut(s) | 44, 164, 196, 454, 589 |
| Bme18I | GGWCC | 2 cut(s) | 576, 802 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 736 |
| BmeT110I | CYCGRG | 2 cut(s) | 112, 371 |
| BmgBI | CACGTC | 2 cut(s) | 270, 733 |
| BmgT120I | GGNCC | 7 cut(s) | 61, 165, 166, 246, 461, 576, 802 |
| BmiI | GGNNCC | 6 cut(s) | 63, 167, 307, 525, 577, 780 |
| BmrFI | CCNGG | 5 cut(s) | 44, 164, 196, 454, 589 |
| BmsI | GCATC | 1 cut(s) | 699 |
| BoxI | GACNNNNGTC | 1 cut(s) | 598 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 479, 511 |
| BpmI | CTGGAG | 3 cut(s) | 632, 857, 994 |
| Bpu10I | CCTNAGC | 1 cut(s) | 666 |
| BpuMI | CCSGG | 3 cut(s) | 164, 454, 589 |
| BsaHI | GRCGYC | 3 cut(s) | 51, 524, 686 |
| BsaJI | CCNNGG | 3 cut(s) | 417, 587, 852 |
| BsaWI | WCCGGW | 1 cut(s) | 285 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 608, 638 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 271, 594, 811 |
| Bse118I | RCCGGY | 1 cut(s) | 781 |
| BseAI | TCCGGA | 1 cut(s) | 285 |
| BseBI | CCWGG | 2 cut(s) | 44, 196 |
| BseDI | CCNNGG | 3 cut(s) | 417, 587, 852 |
| BseGI | GGATG | 4 cut(s) | 795, 862, 871, 1008 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 271, 594, 811 |
| BseMII | CTCAG | 3 cut(s) | 326, 366, 657 |
| BseRI | GAGGAG | 7 cut(s) | 241, 629, 632, 827, 896, 911, 914 |
| BseSI | GKGCMC | 1 cut(s) | 169 |
| BseX3I | CGGCCG | 2 cut(s) | 561, 690 |
| BseXI | GCAGC | 7 cut(s) | 80, 360, 686, 692, 767, 926, 955 |
| BsgI | GTGCAG | 2 cut(s) | 774, 1046 |
| Bsh1236I | CGCG | 9 cut(s) | 231, 233, 261, 343, 419, 439, 470, 518, 520 |
| Bsh1285I | CGRYCG | 2 cut(s) | 564, 693 |
| BshFI | GGCC | 8 cut(s) | 62, 167, 248, 462, 563, 662, 671, 692 |
| BshNI | GGYRCC | 1 cut(s) | 523 |
| BsiEI | CGRYCG | 2 cut(s) | 564, 693 |
| BsiHKAI | GWGCWC | 3 cut(s) | 449, 1010, 1020 |
| BsiHKCI | CYCGRG | 2 cut(s) | 112, 371 |
| BsiSI | CCGG | 6 cut(s) | 163, 286, 442, 454, 589, 782 |
| BslFI | GGGAC | 2 cut(s) | 248, 589 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 271, 594, 811 |
| BsmAI | GTCTC | 4 cut(s) | 18, 135, 368, 809 |
| BsmBI | CGTCTC | 2 cut(s) | 135, 809 |
| BsmFI | GGGAC | 2 cut(s) | 248, 589 |
| BsmI | GAATGC | 1 cut(s) | 429 |
| BsnI | GGCC | 8 cut(s) | 62, 167, 248, 462, 563, 662, 671, 692 |
| BsoBI | CYCGRG | 2 cut(s) | 112, 371 |
| Bsp120I | GGGCCC | 1 cut(s) | 165 |
| Bsp1286I | GDGCHC | 7 cut(s) | 153, 169, 239, 449, 492, 1010, 1020 |
| Bsp13I | TCCGGA | 1 cut(s) | 285 |
| Bsp143I | GATC | 2 cut(s) | 338, 570 |
| Bsp19I | CCATGG | 1 cut(s) | 852 |
| BspANI | GGCC | 8 cut(s) | 62, 167, 248, 462, 563, 662, 671, 692 |
| BspCNI | CTCAG | 3 cut(s) | 327, 365, 658 |
| BspEI | TCCGGA | 1 cut(s) | 285 |
| BspFNI | CGCG | 9 cut(s) | 231, 233, 261, 343, 419, 439, 470, 518, 520 |
| BspLI | GGNNCC | 6 cut(s) | 63, 167, 307, 525, 577, 780 |
| BspMAI | CTGCAG | 1 cut(s) | 70 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BspT107I | GGYRCC | 1 cut(s) | 523 |
| BsrBI | CCGCTC | 1 cut(s) | 719 |
| BsrFI | RCCGGY | 1 cut(s) | 781 |
| BssAI | RCCGGY | 1 cut(s) | 781 |
| BssECI | CCNNGG | 3 cut(s) | 417, 587, 852 |
| BssMI | GATC | 2 cut(s) | 338, 570 |
| BssNI | GRCGYC | 3 cut(s) | 51, 524, 686 |
| BssT1I | CCWWGG | 1 cut(s) | 852 |
| Bst2UI | CCWGG | 2 cut(s) | 44, 196 |
| Bst4CI | ACNGT | 4 cut(s) | 298, 305, 503, 597 |
| Bst6I | CTCTTC | 4 cut(s) | 141, 690, 867, 888 |
| BstACI | GRCGYC | 3 cut(s) | 51, 524, 686 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1005 |
| BstC8I | GCNNGC | 3 cut(s) | 60, 235, 522 |
| BstDEI | CTNAG | 4 cut(s) | 28, 335, 352, 666 |
| BstDSI | CCRYGG | 2 cut(s) | 417, 852 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 809 |
| BstF5I | GGATG | 4 cut(s) | 795, 862, 871, 1008 |
| BstFNI | CGCG | 9 cut(s) | 231, 233, 261, 343, 419, 439, 470, 518, 520 |
| BstH2I | RGCGCY | 2 cut(s) | 527, 611 |
| BstHHI | GCGC | 7 cut(s) | 233, 441, 520, 526, 610, 655, 724 |
| BstKTI | GATC | 2 cut(s) | 341, 573 |
| BstMAI | GTCTC | 4 cut(s) | 18, 135, 368, 809 |
| BstMBI | GATC | 2 cut(s) | 338, 570 |
| BstMCI | CGRYCG | 2 cut(s) | 564, 693 |
| BstNI | CCWGG | 2 cut(s) | 44, 196 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 598 |
| BstSCI | CCNGG | 5 cut(s) | 42, 162, 194, 452, 587 |
| BstSFI | CTRYAG | 1 cut(s) | 66 |
| BstSLI | GKGCMC | 1 cut(s) | 169 |
| BstUI | CGCG | 9 cut(s) | 231, 233, 261, 343, 419, 439, 470, 518, 520 |
| BstV1I | GCAGC | 7 cut(s) | 80, 360, 686, 692, 767, 926, 955 |
| BstZI | CGGCCG | 2 cut(s) | 561, 690 |
| BsuRI | GGCC | 8 cut(s) | 62, 167, 248, 462, 563, 662, 671, 692 |
| BtgI | CCRYGG | 2 cut(s) | 417, 852 |
| BtgZI | GCGATG | 1 cut(s) | 722 |
| BtrI | CACGTC | 2 cut(s) | 270, 733 |
| BtsCI | GGATG | 4 cut(s) | 795, 862, 871, 1008 |
| BtsIMutI | CAGTG | 2 cut(s) | 294, 360 |
| Cac8I | GCNNGC | 3 cut(s) | 60, 235, 522 |
| CfoI | GCGC | 7 cut(s) | 233, 441, 520, 526, 610, 655, 724 |
| Cfr10I | RCCGGY | 1 cut(s) | 781 |
| Cfr13I | GGNCC | 7 cut(s) | 61, 165, 166, 246, 461, 576, 802 |
| Cfr42I | CCGCGG | 1 cut(s) | 420 |
| CseI | GACGC | 4 cut(s) | 250, 332, 459, 675 |
| Csp6I | GTAC | 2 cut(s) | 762, 877 |
| CviAII | CATG | 4 cut(s) | 388, 713, 853, 949 |
| CviQI | GTAC | 2 cut(s) | 762, 877 |
| DdeI | CTNAG | 4 cut(s) | 28, 335, 352, 666 |
| DinI | GGCGCC | 1 cut(s) | 525 |
| DpnI | GATC | 2 cut(s) | 340, 572 |
| DpnII | GATC | 2 cut(s) | 338, 570 |
| DraI | TTTAAA | 1 cut(s) | 208 |
| DriI | GACNNNNNGTC | 1 cut(s) | 736 |
| EaeI | YGGCCR | 3 cut(s) | 561, 660, 690 |
| EagI | CGGCCG | 2 cut(s) | 561, 690 |
| Eam1104I | CTCTTC | 4 cut(s) | 141, 690, 867, 888 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 736 |
| EarI | CTCTTC | 4 cut(s) | 141, 690, 867, 888 |
| EciI | GGCGGA | 5 cut(s) | 209, 716, 758, 791, 926 |
| Ecl136II | GAGCTC | 2 cut(s) | 447, 1018 |
| EclXI | CGGCCG | 2 cut(s) | 561, 690 |
| Eco130I | CCWWGG | 1 cut(s) | 852 |
| Eco24I | GRGCYC | 6 cut(s) | 153, 169, 239, 449, 492, 1020 |
| Eco32I | GATATC | 1 cut(s) | 277 |
| Eco47I | GGWCC | 2 cut(s) | 576, 802 |
| Eco47III | AGCGCT | 1 cut(s) | 609 |
| Eco52I | CGGCCG | 2 cut(s) | 561, 690 |
| Eco53kI | GAGCTC | 2 cut(s) | 447, 1018 |
| Eco88I | CYCGRG | 2 cut(s) | 112, 371 |
| EcoICRI | GAGCTC | 2 cut(s) | 447, 1018 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 809 |
| EcoO109I | RGGNCCY | 1 cut(s) | 166 |
| EcoRII | CCWGG | 2 cut(s) | 42, 194 |
| EcoRV | GATATC | 1 cut(s) | 277 |
| EcoT14I | CCWWGG | 1 cut(s) | 852 |
| EcoT22I | ATGCAT | 1 cut(s) | 714 |
| EcoT38I | GRGCYC | 6 cut(s) | 153, 169, 239, 449, 492, 1020 |
| EgeI | GGCGCC | 1 cut(s) | 525 |
| EheI | GGCGCC | 1 cut(s) | 525 |
| ErhI | CCWWGG | 1 cut(s) | 852 |
| Esp3I | CGTCTC | 2 cut(s) | 135, 809 |
| FaeI | CATG | 4 cut(s) | 391, 716, 856, 952 |
| FaiI | YATR | 7 cut(s) | 134, 389, 714, 854, 933, 950, 960 |
| FaqI | GGGAC | 2 cut(s) | 248, 589 |
| FatI | CATG | 4 cut(s) | 387, 712, 852, 948 |
| FauI | CCCGC | 4 cut(s) | 226, 412, 513, 751 |
| FblI | GTMKAC | 2 cut(s) | 402, 602 |
| FokI | GGATG | 4 cut(s) | 802, 869, 878, 1015 |
| FriOI | GRGCYC | 6 cut(s) | 153, 169, 239, 449, 492, 1020 |
| GlaI | GCGC | 7 cut(s) | 232, 440, 519, 525, 609, 654, 723 |
| GsuI | CTGGAG | 3 cut(s) | 632, 857, 994 |
| HaeII | RGCGCY | 2 cut(s) | 527, 611 |
| HaeIII | GGCC | 8 cut(s) | 62, 167, 248, 462, 563, 662, 671, 692 |
| HapII | CCGG | 6 cut(s) | 163, 286, 442, 454, 589, 782 |
| HgaI | GACGC | 4 cut(s) | 250, 332, 459, 675 |
| HhaI | GCGC | 7 cut(s) | 233, 441, 520, 526, 610, 655, 724 |
| Hin1I | GRCGYC | 3 cut(s) | 51, 524, 686 |
| Hin1II | CATG | 4 cut(s) | 391, 716, 856, 952 |
| Hin6I | GCGC | 7 cut(s) | 231, 439, 518, 524, 608, 653, 722 |
| HinP1I | GCGC | 7 cut(s) | 231, 439, 518, 524, 608, 653, 722 |
| HincII | GTYRAC | 1 cut(s) | 603 |
| HindII | GTYRAC | 1 cut(s) | 603 |
| HinfI | GANTC | 4 cut(s) | 475, 494, 581, 839 |
| HpaII | CCGG | 6 cut(s) | 163, 286, 442, 454, 589, 782 |
| HphI | GGTGA | 4 cut(s) | 305, 317, 323, 796 |
| Hpy166II | GTNNAC | 4 cut(s) | 301, 403, 558, 603 |
| Hpy188I | TCNGA | 8 cut(s) | 120, 140, 274, 484, 499, 513, 543, 1085 |
| Hpy188III | TCNNGA | 4 cut(s) | 286, 574, 1011, 1073 |
| Hpy8I | GTNNAC | 4 cut(s) | 301, 403, 558, 603 |
| HpyAV | CCTTC | 2 cut(s) | 175, 338 |
| HpyCH4III | ACNGT | 4 cut(s) | 298, 305, 503, 597 |
| HpyCH4IV | ACGT | 5 cut(s) | 51, 269, 732, 924, 992 |
| HpyCH4V | TGCA | 8 cut(s) | 68, 712, 755, 948, 971, 999, 1027, 1050 |
| HpyF3I | CTNAG | 4 cut(s) | 28, 335, 352, 666 |
| HpySE526I | ACGT | 5 cut(s) | 51, 269, 732, 924, 992 |
| Hsp92I | GRCGYC | 3 cut(s) | 51, 524, 686 |
| Hsp92II | CATG | 4 cut(s) | 391, 716, 856, 952 |
| HspAI | GCGC | 7 cut(s) | 231, 439, 518, 524, 608, 653, 722 |
| KasI | GGCGCC | 1 cut(s) | 523 |
| Kpn2I | TCCGGA | 1 cut(s) | 285 |
| KspI | CCGCGG | 1 cut(s) | 420 |
| Kzo9I | GATC | 2 cut(s) | 338, 570 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| LmnI | GCTCC | 4 cut(s) | 444, 716, 778, 1013 |
| Lsp1109I | GCAGC | 7 cut(s) | 80, 360, 686, 692, 767, 926, 955 |
| LweI | GCATC | 1 cut(s) | 699 |
| MaeII | ACGT | 5 cut(s) | 51, 269, 732, 924, 992 |
| MaeIII | GTNAC | 2 cut(s) | 845, 986 |
| MalI | GATC | 2 cut(s) | 340, 572 |
| MbiI | CCGCTC | 1 cut(s) | 719 |
| MboI | GATC | 2 cut(s) | 338, 570 |
| MboII | GAAGA | 8 cut(s) | 158, 314, 707, 881, 884, 899, 902, 905 |
| MfeI | CAATTG | 1 cut(s) | 1036 |
| MhlI | GDGCHC | 7 cut(s) | 153, 169, 239, 449, 492, 1010, 1020 |
| MluCI | AATT | 5 cut(s) | 412, 934, 1036, 1054, 1068 |
| MluI | ACGCGT | 1 cut(s) | 468 |
| Mly113I | GGCGCC | 1 cut(s) | 524 |
| MlyI | GAGTC | 3 cut(s) | 488, 575, 848 |
| MmeI | TCCRAC | 5 cut(s) | 98, 252, 507, 521, 789 |
| Mph1103I | ATGCAT | 1 cut(s) | 714 |
| MroI | TCCGGA | 1 cut(s) | 285 |
| MseI | TTAA | 2 cut(s) | 38, 207 |
| MslI | CAYNNNNRTG | 1 cut(s) | 963 |
| MspA1I | CMGCKG | 4 cut(s) | 419, 665, 683, 758 |
| MspI | CCGG | 6 cut(s) | 163, 286, 442, 454, 589, 782 |
| MspR9I | CCNGG | 5 cut(s) | 44, 164, 196, 454, 589 |
| MunI | CAATTG | 1 cut(s) | 1036 |
| Mva1269I | GAATGC | 1 cut(s) | 429 |
| MvaI | CCWGG | 2 cut(s) | 44, 196 |
| MvnI | CGCG | 9 cut(s) | 231, 233, 261, 343, 419, 439, 470, 518, 520 |
| NarI | GGCGCC | 1 cut(s) | 524 |
| NciI | CCSGG | 3 cut(s) | 164, 454, 589 |
| NcoI | CCATGG | 1 cut(s) | 852 |
| NdeII | GATC | 2 cut(s) | 338, 570 |
| NlaIII | CATG | 4 cut(s) | 391, 716, 856, 952 |
| NlaIV | GGNNCC | 6 cut(s) | 63, 167, 307, 525, 577, 780 |
| NmuCI | GTSAC | 1 cut(s) | 986 |
| NsiI | ATGCAT | 1 cut(s) | 714 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 369 |
| PctI | GAATGC | 1 cut(s) | 429 |
| PfeI | GAWTC | 1 cut(s) | 475 |
| PflFI | GACNNNGTC | 1 cut(s) | 50 |
| PleI | GAGTC | 3 cut(s) | 488, 575, 847 |
| PluTI | GGCGCC | 1 cut(s) | 527 |
| PpsI | GAGTC | 3 cut(s) | 488, 575, 847 |
| PshAI | GACNNNNGTC | 1 cut(s) | 598 |
| Psp124BI | GAGCTC | 2 cut(s) | 449, 1020 |
| Psp6I | CCWGG | 2 cut(s) | 42, 194 |
| PspGI | CCWGG | 2 cut(s) | 42, 194 |
| PspN4I | GGNNCC | 6 cut(s) | 63, 167, 307, 525, 577, 780 |
| PspOMI | GGGCCC | 1 cut(s) | 165 |
| PspPI | GGNCC | 7 cut(s) | 61, 165, 166, 246, 461, 576, 802 |
| PstI | CTGCAG | 1 cut(s) | 70 |
| PsyI | GACNNNGTC | 1 cut(s) | 50 |
| RsaI | GTAC | 2 cut(s) | 763, 878 |
| RsaNI | GTAC | 2 cut(s) | 762, 877 |
| RseI | CAYNNNNRTG | 1 cut(s) | 963 |
| SacI | GAGCTC | 2 cut(s) | 449, 1020 |
| SacII | CCGCGG | 1 cut(s) | 420 |
| SalI | GTCGAC | 1 cut(s) | 601 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SaqAI | TTAA | 2 cut(s) | 38, 207 |
| Sau3AI | GATC | 2 cut(s) | 338, 570 |
| Sau96I | GGNCC | 7 cut(s) | 61, 165, 166, 246, 461, 576, 802 |
| SchI | GAGTC | 3 cut(s) | 488, 575, 848 |
| ScrFI | CCNGG | 5 cut(s) | 44, 164, 196, 454, 589 |
| SduI | GDGCHC | 7 cut(s) | 153, 169, 239, 449, 492, 1010, 1020 |
| SfaNI | GCATC | 1 cut(s) | 699 |
| SfcI | CTRYAG | 1 cut(s) | 66 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 668 |
| SfoI | GGCGCC | 1 cut(s) | 525 |
| Sfr303I | CCGCGG | 1 cut(s) | 420 |
| SgrBI | CCGCGG | 1 cut(s) | 420 |
| SinI | GGWCC | 2 cut(s) | 576, 802 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 963 |
| Sse9I | AATT | 5 cut(s) | 412, 934, 1036, 1054, 1068 |
| SspDI | GGCGCC | 1 cut(s) | 523 |
| SstI | GAGCTC | 2 cut(s) | 449, 1020 |
| StyD4I | CCNGG | 5 cut(s) | 42, 162, 194, 452, 587 |
| StyI | CCWWGG | 1 cut(s) | 852 |
| TaaI | ACNGT | 4 cut(s) | 298, 305, 503, 597 |
| TaiI | ACGT | 5 cut(s) | 54, 272, 735, 927, 995 |
| TaqI | TCGA | 6 cut(s) | 129, 449, 473, 602, 842, 1074 |
| TaqII | GACCGA | 1 cut(s) | 593 |
| TasI | AATT | 5 cut(s) | 412, 934, 1036, 1054, 1068 |
| TauI | GCSGC | 7 cut(s) | 430, 653, 665, 674, 680, 686, 722 |
| TfiI | GAWTC | 1 cut(s) | 475 |
| Tru1I | TTAA | 2 cut(s) | 38, 207 |
| Tru9I | TTAA | 2 cut(s) | 38, 207 |
| TscAI | CASTG | 2 cut(s) | 301, 360 |
| TseFI | GTSAC | 1 cut(s) | 986 |
| TseI | GCWGC | 7 cut(s) | 68, 348, 674, 680, 755, 939, 968 |
| Tsp45I | GTSAC | 1 cut(s) | 986 |
| TspDTI | ATGAA | 2 cut(s) | 882, 1048 |
| TspGWI | ACGGA | 5 cut(s) | 244, 468, 538, 785, 833 |
| TspRI | CASTG | 2 cut(s) | 301, 360 |
| Tth111I | GACNNNGTC | 1 cut(s) | 50 |
| VpaK11BI | GGWCC | 2 cut(s) | 576, 802 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 809 |
| XapI | RAATTY | 1 cut(s) | 1068 |
| XmiI | GTMKAC | 2 cut(s) | 402, 602 |
| ZraI | GACGTC | 1 cut(s) | 52 |
| Zsp2I | ATGCAT | 1 cut(s) | 714 |