Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003313

Physical Location & Seq

Genomic Coordinates Reverse (-)

20522549 .. 20527338

Gene Structure 4790 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G229600.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGGCAGCAAAGGAAAATTCTTCTGTACAAGTGCAGAAGAACTTAGAGGGGTTTGTAGCCATTCTAACATCTGCAGCATGTGAATGGTTTTTTATATTTCTTCTGCTTGTCAATGGACTATTATCCTATTTGCTGACTAAATTTGCAAACTATTGCAATTTGCAAAAGCCTTGCATCTTTTGCTCGAGGTTTGAACATGTTATAGGCAACGAAAAACCTCAACTTTATCAGGATCTACTTTGCAGCAACCACATATCAGAGCTCTCGTCTTGGATAGCTCGTCAAGTTTATGGTAAGCATGATGGAAATGAAACTTGTGAAGATTCCAACCCAGAAACGCACATTCTTTTGGATGGTAAGTCAGGATTGGATCTTCGAAGTTCCGGTTCAAAGAGGTCCAACCAGAAGAGAAATTTTGTTCATAGTTCTGTGGGTGCAAGTCCATGCTCTTATTGCAGTAGGCATCGGAGACCTAGAGAAAATGCTCAAGGACTGCGACGGAAGTCACCTAGTCCCAAACCTAATATTCCTTTGCCACGTTTTTCAACCCGTAGCCGTTTACCTCGTCGGGATGGTTCAAAGAAGATGAGGGATAAATTTCCTGCCTCAGTAACTGTTCGTGGTTCCGGAAGAGTTGGCTGGGATCCCATGTCACATGTAGGAGGATACACTGAGTTGAGGGTTTGTTCTAATACTGACTCTGCCCGTTTTCCGGGAAAAATTGGTTGGGATCCCTTGTCACATGTAGGATACACTGAGTTGAAGATTAGTTCTGATACTGACTCTGAGTTTCCATTTTCTGATGACGACGATGGGAGCAGTTTCATCAGTGGAATTCATGAGCCTAAGAGGGAACGATTTGTAGTTCAATGTGCTTCAGAAAATCCATTCAAAGCACCAGTGGAAGGTTTGAATCCAGCAAAGCAAAGCAATGTTTCCTACAAAGACAAACCTTCACCTTCTGATCCATGTGTGCAGCCAGATGGTAGCAAGGCCTCTGAGGTAAAGGTCTTGGGTGCCAATGTTGCTGTTGAGAATGGCTTCGATGAGCCTAACTGGCAGCAAGCGAGTTGGACGTCCAATCCTTCTGCATTAGCTGAGCTTATTTCACCAGATGATGCCCCCCCATCATCTAATGTTGTTGAAAAAACAGATGGTACTGGGACAAGCGACATTGGACATGCATCCACCAATAAGAACGATGAACTTTTGAAGTCTATAAGGGCAACAGATGGAGCATCTGCTAAAACTGATCCTATCATAGATGATCCAGCTCTTGTAAAGCCAAATCATATTAGTGTAAATGTTGTGTCTGAGTCAGCAGCCACCGGTAAAGAAGCAGATTTGTCTGGTATTGTTAAAGAACCTACATTGAAGGGAGTTAATGGGGAACTGAAACCGTTGGCTTCACAAATTTCTTCTGCTCAGCAGAGTAATTTATCATCAAATAATACAATGTCTGGGGTAAATGGTTGCGCTGATGAAAAGCAGGTAACTGATGCTTCCAAATCTAATCCAAAGCCAATGATTCATACATCAGCATCAGTAGAATCTGCTCTTGAATCTCTGGATGAAGGCTATGTCAGTGAAATTGAAGGTGAAAGTCTAGATGATCGGTTAAAACGACAGGTTGAATATTACAGAAAATGCATAAAGGAATTGTATAAGGAATTAGAGGAAGAAAGGAGTGCTTCCACAATTGCTGCAAATCAGGCAATGGCCATGATCACGAAGCTGCAAGAAGAGAAAGCTGCAATTCATATGGAGGCCCTTCAGTACTTAAGAATGATGGAAGAGCAGGCTGAGTTTGATGTAGACGCACTGGAAAAAGCCAATGATCTCCTGGCTGAAAAGGAGAAAGAGATACAGGACTTGGAAGCAGAGCTAGAATTTTCAAAGTTTGATGTCCCAGATGAAACAATGGAGAATATGCCGCTCAAAAGCTCTAATTTGAAGGGTGAAATTGACACCACTGAGAGTACTGATGTGCCCATCATAAAGAATGATGTCGAAGTTACTTGCAACTCAAGTACTGTTGTGCCCGGCATAGAAAAGGATGTTGAAGTTGCTTGTAACTCAATGGATACTGAGGTACCCGAAGCTAGTAATGATCGTCTTTTTTCTGAAACTACGCTTTTAGAGTTTGAGGATGAAAAATTATACATTTCAAATTGTTTGAAGAGCTTGGAGAGGAAGCTTTCTGAAATTTCCTGTAATGGGGTTCCCTTCAACATGCCTAATGGTGGGCAGGCTAGAAAGTATATGGATGATGAACCAATTCAAGAAGAGACTCCTATAAAGGAGAGGGTTCTATTAAATGGTCAGGTTGAAGAGAATGTTGTGCATGGACAAAAAGATTTACATGTATCTAACGGAAGCTCTGCTGCTCAAGAGGGGCCAGCTCATTCTGAAAGTTTAGACCATGAAGAAAAAAATGATTCCGATTTCCATGGGCAAAATGATTTCATGGATCATAGAGAAACCGAGTTGGTTGTTCTGGAAAATGAAATCTCAGACCTTAATGATAGGTTGGAGGCACTAGAGACTGATCATGATTTTCTTGAGCACATGCTTTACTCTCTTCAAAATGGAAATGAAGGCCTACGGTTTGTTCAAGACATAGCTCATCAGCTGCGAGAATTGCGAAAAATTGGGACCGCTTTCAGATGTCAGTCTGTTTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Zein-binding

Protein Analysis

895

Amino Acids

98.85

Weight (kDa)

4.88

Isoelectric Point (pI)

42.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30690 AT2G30690
fragaria_vesca	FvH4_2g22220 FvH4_2g22220 FvH4_2g22220 FvH4_2g22220 FvH4_2g22220 FvH4_2g22220
malus_domestica	MD05G1203200.v1.1 MD10G1190500.v1.1
prunus_persica	Prupe.8G128800_v2.0.a1 Prupe.8G229600_v2.0.a1 Prupe.8G229600_v2.0.a1 Prupe.8G229600_v2.0.a1 Prupe.8G229600_v2.0.a1 Prupe.8G229600_v2.0.a1 Prupe.8G229600_v2.0.a1 Prupe.8G229600_v2.0.a1 Prupe.8G229600_v2.0.a1
pyrus_communis	pycom05g18980 pycom10g16410
rosa_chinensis	RchiOBHm_Chr6g0289141
rosa_laevigata	RLG00000012328
rosa_multiflora	Rmu_co8268971.1_g000001 Rmu_sc0000666.1_g000028 Rmu_sc0001527.1_g000001 Rmu_sc0040302.1_g000001
rosa_roxburghii	Rroxscaffold_7G00179540
rosa_rugosa	Rorug06G0201000 Rorug06G0201000 Rorug06G0201100
rosa_samantha	Rh6AG312300 Rh6BG319200 Rh6CG325600 Rh6DG311500
rosa_wichuraiana	Rw6G026970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1079
Acc36I	ACCTGC	1 cut(s)	1480
Acc65I	GGTACC	1 cut(s)	2092
AccB1I	GGYRCC	2 cut(s)	1016, 2092
AccBSI	CCGCTC	1 cut(s)	1936
AccI	GTMKAC	1 cut(s)	1815
AccIII	TCCGGA	1 cut(s)	626
AciI	CCGC	2 cut(s)	1934, 2658
AcoI	YGGCCR	1 cut(s)	1719
AcsI	RAATTY	8 cut(s)	16, 140, 412, 596, 834, 1413, 1889, 2205
AcuI	CTGAAG	2 cut(s)	861, 1757
AcyI	GRCGYC	1 cut(s)	1076
AfaI	GTAC	6 cut(s)	27, 1159, 1778, 1981, 2032, 2094
AfiI	CCNNNNNNNGG	4 cut(s)	712, 905, 2217, 2243
AflII	CTTAAG	1 cut(s)	1780
AflIII	ACRYGT	4 cut(s)	196, 655, 742, 2362
AgeI	ACCGGT	1 cut(s)	1328
AjnI	CCWGG	1 cut(s)	1842
AjuI	GAANNNNNNNTTGG	2 cut(s)	709, 741
Alw21I	GWGCWC	2 cut(s)	264, 2568
Alw26I	GTCTC	3 cut(s)	463, 2282, 2537
AlwNI	CAGNNNCTG	1 cut(s)	614
Ama87I	CYCGRG	1 cut(s)	184
Aor13HI	TCCGGA	1 cut(s)	626
AoxI	GGCC	5 cut(s)	993, 1719, 1767, 2396, 2599
ApoI	RAATTY	8 cut(s)	16, 140, 412, 596, 834, 1413, 1889, 2205
AsiGI	ACCGGT	1 cut(s)	1328
Asp700I	GAANNNNTTC	2 cut(s)	1040, 2277
Asp718I	GGTACC	1 cut(s)	2092
AspLEI	GCGC	1 cut(s)	1478
AspS9I	GGNCC	4 cut(s)	396, 1768, 2396, 2655
AsuC2I	CCSGG	2 cut(s)	714, 2043
AsuHPI	GGTGA	5 cut(s)	498, 948, 1101, 1610, 1970
AsuII	TTCGAA	1 cut(s)	376
AvaI	CYCGRG	1 cut(s)	184
AvaII	GGWCC	2 cut(s)	396, 2655
BaeGI	GKGCMC	2 cut(s)	1992, 2043
BaeI	ACNNNNGTAYC	4 cut(s)	2076, 2076, 2109, 2109
BalI	TGGCCA	1 cut(s)	1721
BamHI	GGATCC	2 cut(s)	643, 730
BanI	GGYRCC	2 cut(s)	1016, 2092
BanII	GRGCYC	1 cut(s)	264
Bbv12I	GWGCWC	2 cut(s)	264, 2568
BceAI	ACGGC	1 cut(s)	540
BciT130I	CCWGG	1 cut(s)	1844
BciVI	GTATCC	3 cut(s)	659, 743, 2077
BclI	TGATCA	2 cut(s)	1725, 2548
BcnI	CCSGG	2 cut(s)	714, 2043
BcoDI	GTCTC	3 cut(s)	463, 2282, 2537
BfaI	CTAG	7 cut(s)	474, 510, 1607, 1886, 2103, 2253, 2540
BfmI	CTRYAG	1 cut(s)	72
BfrI	CTTAAG	1 cut(s)	1780
BfuAI	ACCTGC	1 cut(s)	1480
BfuI	GTATCC	3 cut(s)	659, 743, 2077
BglI	GCCNNNNNGGC	1 cut(s)	1057
BlpI	GCTNAGC	2 cut(s)	1098, 1425
BmcAI	AGTACT	3 cut(s)	1778, 1981, 2032
Bme1390I	CCNGG	3 cut(s)	714, 1844, 2043
Bme18I	GGWCC	2 cut(s)	396, 2655
BmeT110I	CYCGRG	1 cut(s)	184
BmgT120I	GGNCC	4 cut(s)	396, 1768, 2396, 2655
BmiI	GGNNCC	8 cut(s)	625, 645, 732, 1018, 2094, 2223, 2397, 2656
BmrFI	CCNGG	3 cut(s)	714, 1844, 2043
BmrI	ACTGGG	1 cut(s)	1170
BmsI	GCATC	7 cut(s)	183, 472, 1108, 1193, 1247, 1489, 1550
BmuI	ACTGGG	1 cut(s)	1170
BoxI	GACNNNNGTC	1 cut(s)	502
Bpu1102I	GCTNAGC	2 cut(s)	1098, 1425
Bpu14I	TTCGAA	1 cut(s)	376
BpuEI	CTTGAG	4 cut(s)	471, 2011, 2373, 2582
BpuMI	CCSGG	2 cut(s)	714, 2043
BsaHI	GRCGYC	1 cut(s)	1076
BsaI	GGTCTC	1 cut(s)	463
BsaJI	CCNNGG	1 cut(s)	2449
BsaWI	WCCGGW	3 cut(s)	383, 626, 1328
Bsc4I	CCNNNNNNNGG	4 cut(s)	712, 905, 2217, 2243
Bse118I	RCCGGY	1 cut(s)	1328
Bse1I	ACTGG	4 cut(s)	899, 1061, 1165, 1827
Bse3DI	GCAATG	2 cut(s)	937, 1722
BseAI	TCCGGA	1 cut(s)	626
BseBI	CCWGG	1 cut(s)	1844
BseDI	CCNNGG	1 cut(s)	2449
BseGI	GGATG	7 cut(s)	358, 577, 1184, 1576, 2062, 2155, 2272
BseLI	CCNNNNNNNGG	4 cut(s)	712, 905, 2217, 2243
BseMI	GCAATG	2 cut(s)	937, 1722
BseNI	ACTGG	4 cut(s)	899, 1061, 1165, 1827
BseSI	GKGCMC	2 cut(s)	1992, 2043
BseYI	CCCAGC	1 cut(s)	639
BsgI	GTGCAG	2 cut(s)	53, 995
BshFI	GGCC	5 cut(s)	995, 1721, 1769, 2398, 2601
BshNI	GGYRCC	2 cut(s)	1016, 2092
BshTI	ACCGGT	1 cut(s)	1328
BsiHKAI	GWGCWC	2 cut(s)	264, 2568
BsiHKCI	CYCGRG	1 cut(s)	184
BsiSI	CCGG	5 cut(s)	384, 627, 713, 1329, 2043
BslFI	GGGAC	4 cut(s)	498, 1177, 1892, 2668
BslI	CCNNNNNNNGG	4 cut(s)	712, 905, 2217, 2243
BsmAI	GTCTC	3 cut(s)	463, 2282, 2537
BsmFI	GGGAC	4 cut(s)	498, 1177, 1892, 2668
BsnI	GGCC	5 cut(s)	995, 1721, 1769, 2398, 2601
Bso31I	GGTCTC	1 cut(s)	463
BsoBI	CYCGRG	1 cut(s)	184
Bsp119I	TTCGAA	1 cut(s)	376
Bsp1286I	GDGCHC	4 cut(s)	264, 1992, 2043, 2568
Bsp13I	TCCGGA	1 cut(s)	626
Bsp1407I	TGTACA	1 cut(s)	25
Bsp1720I	GCTNAGC	2 cut(s)	1098, 1425
Bsp19I	CCATGG	1 cut(s)	2449
BspACI	CCGC	2 cut(s)	1934, 2658
BspANI	GGCC	5 cut(s)	995, 1721, 1769, 2398, 2601
BspEI	TCCGGA	1 cut(s)	626
BspHI	TCATGA	2 cut(s)	838, 2551
BspLI	GGNNCC	8 cut(s)	625, 645, 732, 1018, 2094, 2223, 2397, 2656
BspMAI	CTGCAG	1 cut(s)	76
BspMI	ACCTGC	1 cut(s)	1480
BspQI	GCTCTTC	2 cut(s)	1788, 2174
BspT104I	TTCGAA	1 cut(s)	376
BspT107I	GGYRCC	2 cut(s)	1016, 2092
BspTI	CTTAAG	1 cut(s)	1780
BspTNI	GGTCTC	1 cut(s)	463
BsrBI	CCGCTC	1 cut(s)	1936
BsrDI	GCAATG	2 cut(s)	937, 1722
BsrFI	RCCGGY	1 cut(s)	1328
BsrGI	TGTACA	1 cut(s)	25
BsrI	ACTGG	4 cut(s)	899, 1061, 1165, 1827
BssAI	RCCGGY	1 cut(s)	1328
BssECI	CCNNGG	1 cut(s)	2449
BssNI	GRCGYC	1 cut(s)	1076
BssT1I	CCWWGG	1 cut(s)	2449
Bst2UI	CCWGG	1 cut(s)	1844
Bst4CI	ACNGT	4 cut(s)	616, 1401, 2035, 2607
Bst6I	CTCTTC	8 cut(s)	401, 625, 1737, 1788, 2174, 2280, 2325, 2586
BstACI	GRCGYC	1 cut(s)	1076
BstAFI	CTTAAG	1 cut(s)	1780
BstAPI	GCANNNNNTGC	1 cut(s)	180
BstAUI	TGTACA	1 cut(s)	25
BstBI	TTCGAA	1 cut(s)	376
BstC8I	GCNNGC	4 cut(s)	1065, 1800, 2250, 2400
BstDSI	CCRYGG	1 cut(s)	2449
BstF5I	GGATG	7 cut(s)	358, 577, 1184, 1576, 2062, 2155, 2272
BstHHI	GCGC	1 cut(s)	1478
BstMAI	GTCTC	3 cut(s)	463, 2282, 2537
BstMWI	GCNNNNNNNGC	6 cut(s)	180, 453, 1025, 1057, 1712, 2641
BstNI	CCWGG	1 cut(s)	1844
BstNSI	RCATGY	8 cut(s)	81, 200, 659, 746, 1184, 2236, 2366, 2572
BstPAI	GACNNNNGTC	1 cut(s)	502
BstSCI	CCNGG	3 cut(s)	712, 1842, 2041
BstSFI	CTRYAG	1 cut(s)	72
BstSLI	GKGCMC	2 cut(s)	1992, 2043
BstX2I	RGATCY	4 cut(s)	232, 370, 643, 730
BstYI	RGATCY	4 cut(s)	232, 370, 643, 730
BsuI	GTATCC	3 cut(s)	659, 743, 2077
BsuRI	GGCC	5 cut(s)	995, 1721, 1769, 2398, 2601
BtgI	CCRYGG	1 cut(s)	2449
BtsCI	GGATG	7 cut(s)	358, 577, 1184, 1576, 2062, 2155, 2272
BtsIMutI	CAGTG	7 cut(s)	669, 753, 835, 906, 1591, 1820, 1971
BveI	ACCTGC	1 cut(s)	1480
Cac8I	GCNNGC	4 cut(s)	1065, 1800, 2250, 2400
CaiI	CAGNNNCTG	1 cut(s)	614
CciI	TCATGA	2 cut(s)	838, 2551
CfoI	GCGC	1 cut(s)	1478
Cfr10I	RCCGGY	1 cut(s)	1328
Cfr13I	GGNCC	4 cut(s)	396, 1768, 2396, 2655
CseI	GACGC	1 cut(s)	1826
Csp6I	GTAC	6 cut(s)	26, 1158, 1777, 1980, 2031, 2093
CspAI	ACCGGT	1 cut(s)	1328
CviQI	GTAC	6 cut(s)	26, 1158, 1777, 1980, 2031, 2093
EaeI	YGGCCR	1 cut(s)	1719
Eam1104I	CTCTTC	8 cut(s)	401, 625, 1737, 1788, 2174, 2280, 2325, 2586
EarI	CTCTTC	8 cut(s)	401, 625, 1737, 1788, 2174, 2280, 2325, 2586
Ecl136II	GAGCTC	1 cut(s)	262
Eco130I	CCWWGG	1 cut(s)	2449
Eco147I	AGGCCT	2 cut(s)	995, 2601
Eco24I	GRGCYC	1 cut(s)	264
Eco31I	GGTCTC	1 cut(s)	463
Eco47I	GGWCC	2 cut(s)	396, 2655
Eco53kI	GAGCTC	1 cut(s)	262
Eco57I	CTGAAG	2 cut(s)	861, 1757
Eco88I	CYCGRG	1 cut(s)	184
EcoICRI	GAGCTC	1 cut(s)	262
EcoO109I	RGGNCCY	1 cut(s)	1768
EcoRI	GAATTC	1 cut(s)	834
EcoRII	CCWGG	1 cut(s)	1842
EcoT14I	CCWWGG	1 cut(s)	2449
EcoT22I	ATGCAT	2 cut(s)	1186, 1652
EcoT38I	GRGCYC	1 cut(s)	264
ErhI	CCWWGG	1 cut(s)	2449
FalI	AAGNNNNNCTT	2 cut(s)	1675, 1707
FaqI	GGGAC	4 cut(s)	498, 1177, 1892, 2668
FauNDI	CATATG	1 cut(s)	1761
FbaI	TGATCA	2 cut(s)	1725, 2548
FblI	GTMKAC	1 cut(s)	1815
FokI	GGATG	7 cut(s)	365, 584, 1171, 1583, 2069, 2162, 2279
FriOI	GRGCYC	1 cut(s)	264
FspBI	CTAG	7 cut(s)	474, 510, 1607, 1886, 2103, 2253, 2540
GlaI	GCGC	1 cut(s)	1477
GsaI	CCCAGC	1 cut(s)	643
HaeIII	GGCC	5 cut(s)	995, 1721, 1769, 2398, 2601
HapII	CCGG	5 cut(s)	384, 627, 713, 1329, 2043
HgaI	GACGC	1 cut(s)	1826
HhaI	GCGC	1 cut(s)	1478
Hin1I	GRCGYC	1 cut(s)	1076
Hin6I	GCGC	1 cut(s)	1476
HinP1I	GCGC	1 cut(s)	1476
HindIII	AAGCTT	1 cut(s)	2195
HpaII	CCGG	5 cut(s)	384, 627, 713, 1329, 2043
HphI	GGTGA	5 cut(s)	498, 948, 1101, 1610, 1970
Hpy166II	GTNNAC	2 cut(s)	560, 1816
Hpy8I	GTNNAC	2 cut(s)	560, 1816
Hpy99I	CGWCG	3 cut(s)	501, 570, 812
HpyCH4III	ACNGT	4 cut(s)	616, 1401, 2035, 2607
HpyCH4IV	ACGT	2 cut(s)	538, 1076
HpyF10VI	GCNNNNNNNGC	6 cut(s)	180, 453, 1025, 1057, 1712, 2641
HpySE526I	ACGT	2 cut(s)	538, 1076
Hsp92I	GRCGYC	1 cut(s)	1076
HspAI	GCGC	1 cut(s)	1476
Kpn2I	TCCGGA	1 cut(s)	626
KpnI	GGTACC	1 cut(s)	2096
Ksp22I	TGATCA	2 cut(s)	1725, 2548
LguI	GCTCTTC	2 cut(s)	1788, 2174
LmnI	GCTCC	2 cut(s)	816, 1235
LweI	GCATC	7 cut(s)	183, 472, 1108, 1193, 1247, 1489, 1550
MaeI	CTAG	7 cut(s)	474, 510, 1607, 1886, 2103, 2253, 2540
MaeII	ACGT	2 cut(s)	538, 1076
MaeIII	GTNAC	7 cut(s)	504, 610, 651, 738, 1492, 2014, 2072
MbiI	CCGCTC	1 cut(s)	1936
MfeI	CAATTG	1 cut(s)	1698
MflI	RGATCY	4 cut(s)	232, 370, 643, 730
MhlI	GDGCHC	4 cut(s)	264, 1992, 2043, 2568
MlsI	TGGCCA	1 cut(s)	1721
MluNI	TGGCCA	1 cut(s)	1721
MlyI	GAGTC	4 cut(s)	692, 776, 1325, 2284
MmeI	TCCRAC	4 cut(s)	351, 423, 1052, 2511
Mox20I	TGGCCA	1 cut(s)	1721
Mph1103I	ATGCAT	2 cut(s)	1186, 1652
MroI	TCCGGA	1 cut(s)	626
MroXI	GAANNNNTTC	2 cut(s)	1040, 2277
MscI	TGGCCA	1 cut(s)	1721
MseI	TTAA	6 cut(s)	1359, 1383, 1619, 1781, 2315, 2520
MslI	CAYNNNNRTG	2 cut(s)	82, 1296
Msp20I	TGGCCA	1 cut(s)	1721
MspA1I	CMGCKG	1 cut(s)	2632
MspCI	CTTAAG	1 cut(s)	1780
MspI	CCGG	5 cut(s)	384, 627, 713, 1329, 2043
MspR9I	CCNGG	3 cut(s)	714, 1844, 2043
MunI	CAATTG	1 cut(s)	1698
MvaI	CCWGG	1 cut(s)	1844
MwoI	GCNNNNNNNGC	6 cut(s)	180, 453, 1025, 1057, 1712, 2641
NciI	CCSGG	2 cut(s)	714, 2043
NcoI	CCATGG	1 cut(s)	2449
NdeI	CATATG	1 cut(s)	1761
NlaIV	GGNNCC	8 cut(s)	625, 645, 732, 1018, 2094, 2223, 2397, 2656
NmuCI	GTSAC	3 cut(s)	504, 651, 738
NsiI	ATGCAT	2 cut(s)	1186, 1652
NspI	RCATGY	8 cut(s)	81, 200, 659, 746, 1184, 2236, 2366, 2572
NspV	TTCGAA	1 cut(s)	376
PaeR7I	CTCGAG	1 cut(s)	184
PagI	TCATGA	2 cut(s)	838, 2551
PceI	AGGCCT	2 cut(s)	995, 2601
PciI	ACATGT	4 cut(s)	196, 655, 742, 2362
PciSI	GCTCTTC	2 cut(s)	1788, 2174
PcsI	WCGNNNNNNNCGW	1 cut(s)	1621
PdmI	GAANNNNTTC	2 cut(s)	1040, 2277
PfeI	GAWTC	6 cut(s)	323, 913, 1528, 1550, 1562, 2438
PfoI	TCCNGGA	1 cut(s)	712
PinAI	ACCGGT	1 cut(s)	1328
PleI	GAGTC	4 cut(s)	692, 776, 1324, 2284
PpsI	GAGTC	4 cut(s)	692, 776, 1324, 2284
PscI	ACATGT	4 cut(s)	196, 655, 742, 2362
PshAI	GACNNNNGTC	1 cut(s)	502
Psp124BI	GAGCTC	1 cut(s)	264
Psp6I	CCWGG	1 cut(s)	1842
PspFI	CCCAGC	1 cut(s)	639
PspGI	CCWGG	1 cut(s)	1842
PspN4I	GGNNCC	8 cut(s)	625, 645, 732, 1018, 2094, 2223, 2397, 2656
PspPI	GGNCC	4 cut(s)	396, 1768, 2396, 2655
PspXI	VCTCGAGB	1 cut(s)	184
PstI	CTGCAG	1 cut(s)	76
PstNI	CAGNNNCTG	1 cut(s)	614
PsuI	RGATCY	4 cut(s)	232, 370, 643, 730
PvuII	CAGCTG	1 cut(s)	2632
RsaI	GTAC	6 cut(s)	27, 1159, 1778, 1981, 2032, 2094
RsaNI	GTAC	6 cut(s)	26, 1158, 1777, 1980, 2031, 2093
RseI	CAYNNNNRTG	2 cut(s)	82, 1296
SacI	GAGCTC	1 cut(s)	264
SapI	GCTCTTC	2 cut(s)	1788, 2174
SaqAI	TTAA	6 cut(s)	1359, 1383, 1619, 1781, 2315, 2520
Sau96I	GGNCC	4 cut(s)	396, 1768, 2396, 2655
ScaI	AGTACT	3 cut(s)	1778, 1981, 2032
SchI	GAGTC	4 cut(s)	692, 776, 1325, 2284
ScrFI	CCNGG	3 cut(s)	714, 1844, 2043
SduI	GDGCHC	4 cut(s)	264, 1992, 2043, 2568
SfaNI	GCATC	7 cut(s)	183, 472, 1108, 1193, 1247, 1489, 1550
SfcI	CTRYAG	1 cut(s)	72
Sfr274I	CTCGAG	1 cut(s)	184
SfuI	TTCGAA	1 cut(s)	376
SinI	GGWCC	2 cut(s)	396, 2655
SlaI	CTCGAG	1 cut(s)	184
SmiMI	CAYNNNNRTG	2 cut(s)	82, 1296
SmlI	CTYRAG	6 cut(s)	184, 486, 1780, 2026, 2388, 2561
SmoI	CTYRAG	6 cut(s)	184, 486, 1780, 2026, 2388, 2561
SseBI	AGGCCT	2 cut(s)	995, 2601
SsiI	CCGC	2 cut(s)	1934, 2658
SspI	AATATT	2 cut(s)	526, 1637
SspMI	CTAG	7 cut(s)	474, 510, 1607, 1886, 2103, 2253, 2540
SstI	GAGCTC	1 cut(s)	264
StuI	AGGCCT	2 cut(s)	995, 2601
StyD4I	CCNGG	3 cut(s)	712, 1842, 2041
StyI	CCWWGG	1 cut(s)	2449
TaaI	ACNGT	4 cut(s)	616, 1401, 2035, 2607
TaiI	ACGT	2 cut(s)	541, 1079
TaqI	TCGA	4 cut(s)	185, 376, 1044, 2010
TatI	WGTACW	4 cut(s)	25, 1776, 1979, 2030
TauI	GCSGC	1 cut(s)	1936
TfiI	GAWTC	6 cut(s)	323, 913, 1528, 1550, 1562, 2438
Tru1I	TTAA	6 cut(s)	1359, 1383, 1619, 1781, 2315, 2520
Tru9I	TTAA	6 cut(s)	1359, 1383, 1619, 1781, 2315, 2520
TscAI	CASTG	7 cut(s)	676, 760, 835, 906, 1591, 1827, 1978
TseFI	GTSAC	3 cut(s)	504, 651, 738
Tsp45I	GTSAC	3 cut(s)	504, 651, 738
TspGWI	ACGGA	2 cut(s)	514, 2388
TspRI	CASTG	7 cut(s)	676, 760, 835, 906, 1591, 1827, 1978
Vha464I	CTTAAG	1 cut(s)	1780
VpaK11BI	GGWCC	2 cut(s)	396, 2655
XapI	RAATTY	8 cut(s)	16, 140, 412, 596, 834, 1413, 1889, 2205
XbaI	TCTAGA	1 cut(s)	1606
XceI	RCATGY	8 cut(s)	81, 200, 659, 746, 1184, 2236, 2366, 2572
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1840
XhoI	CTCGAG	1 cut(s)	184
XmiI	GTMKAC	1 cut(s)	1815
XmnI	GAANNNNTTC	2 cut(s)	1040, 2277
XspI	CTAG	7 cut(s)	474, 510, 1607, 1886, 2103, 2253, 2540
ZraI	GACGTC	1 cut(s)	1077
ZrmI	AGTACT	3 cut(s)	1778, 1981, 2032
Zsp2I	ATGCAT	2 cut(s)	1186, 1652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.