pycom10g16410

Zein-binding

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
19655909 .. 19658035
2127 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g16410.2

Sequence Viewer

Length: 2034 bp
ATGGCACCAAAGGGAAATTCATCTGTACGTGTGCAGAAGAACTTAGAGGGGTTTGTAAACATTCTAACATCTGCAGCATGTGAATGGGTTTTGATCGATCTTCTGCTTGTCGACGGACTGTTATCCTATCTGCTGACTAAATTTGCAGAATATTGCAATTTGCAAAAGCCTTGCATCTTTTGCTCCAGGTTGGAACATGTTATAGGCAGTGAAAAACCAAAACCTCAACTTTATCAGGATCTACTTTGCAGTAACCACATATCTGAGTTCTCGTCATGGTTGTCTTGTCAAATTCATGGTAAGCACGATGGCAATGGAATGTGTGAAGATTGCATCGTGTCATATGCCAAAAAGGGCAAGTCAAACCCCGAAAAGCACATGTTTTTGGCTGGCAAGTCGGATTCTGATATTGGAAGTTCCGGTTTTAGGAGGTCCATGCAGAACAGAAAGTTTGTTCATAGTTCTGTGGGTGTAAGGCCATGCTCTTGTTGCAGTAGGCCTTATAGACCTAGAGAAAATGCTCGAGGACTACAACGAAAATCATCTGCTTCCAAACCTAATATTCCTTTGCCACGCTTTTCAAGCCGTAGTCGTATACCTCGCAGGGATGGTTCAAAGAAGACCAGGGATAAAATTTCTGGATCAGTAACTACTTGTCGTCCTGGAAAACTTGGCTGGGATCCCTTGCCACATAGAGGACGCAAGTTGAGGATTAGTTCTGATACTGACTCCACTCTTCGTCCTGGAAAATTTGGCTGGGATCCCTTGCCACATGTAGGATACTCTGAGTTGAGGATTAATTCTGATACTGAATCCGCTCGTCGTGCTGGAAAACTTGGCTGGGATCCCTTGTCTCATGTAGGATACACTGAGTTGAAGATTAGTTCTGATACCGATTCTGAGATTCCATTTTCTGATGAAGACGGTGGTAGCAGCATAATCATTGGAAATCGGGAGCATAAGAAGGAAGCTTTAGTAGTTCAATATACTTCAGAAAAACCATTCAAAGCACCGCTAAATGGTTTGAATCCAGCAAAGCAGAGCAACGTTACCACCGACCACAAGCCTATACTTTCTGATCCAAGTGTGCAGCCAGATGGTAGCACGAGGTCTGATATAAAATTCTTAGGCTCGAATGTTGCTTCAAAGAATGGCTTGGGTGAGCTTAACTGGCAGCAAGCGAGTCAGAATTCCATCCCTTATGCATTCCCTGAGCTTATTTCACTGGATGATATCCCTCCATTTAATGTTGTTGAAACTAGTTTTACTGGGACAAGCGACTTTGGAGATGCACCCATCAGTAAGGATGATGAACTTTTGAAGTCTTTAAGTGCAACAGATGGAGCACCTACTAAAACTGATCTTATCATCAATGACCAACCTCTTACGAAGCCAAATCATATTAATGTAAATGCTGTGTCTGAGTCAGCAGGCATTGATGAGAAAGGAGATACATCCAATTCTATTAAAGAACAACCTACAGTGAAGGTACCTGATAGAGTTGATGGGGAAGTGAAACCAGCGGACTCACAAAATTCTTCAGCTCAGGGGAGAAATTTATCATCAAATAATACTGTTTCAGGGGTACTTGGTGTTGGTGATGAAAATCTGGTAACTGAGGCTTCCAAATCGTCTGCTCAGGAGAGTAATTTATCATCCAATAGTACAATTTCAGGGGTACATGGTGTTGGTGATGAAAAGCCGATTAGTGTTGCTTCCAAATCTTCTGCTCAGGAGAGTAATTTATCATTGAATGGCACAATTTCAGCGGCATGTGGTGTTGGTGGCGAAAAGCCAGTACCTGATGCTTCAAAGTCTTCTGCTCGGAAGAGTAATTCATCATCAAATAATACAATTTCAGGGGTATGTGGTGGTGGTGATGAAAAACAGGTAACTGATGCTTCCAATTCTAATCCAAATCCGGGGCTTAAAACATCATGGTCAGTAGAATCTGGTCTTGAATCTCTGGATGAAGGATATGTCAGTGAAATTGAAGGTGAAAGTATTGTTGATCGATCCACAAGTCAACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

678

Amino Acids

72.65

Weight (kDa)

6.39

Isoelectric Point (pI)

37.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1489
AccB1I GGYRCC 2 cut(s) 4, 1489
AccBSI CCGCTC 1 cut(s) 818
AccI GTMKAC 2 cut(s) 111, 595
AciI CCGC 4 cut(s) 816, 1013, 1523, 1769
AclI AACGTT 1 cut(s) 1047
AcsI RAATTY 9 cut(s) 16, 140, 291, 633, 749, 1121, 1189, 1534, 1555
AcuI CTGAAG 2 cut(s) 975, 1524
AfaI GTAC 6 cut(s) 27, 1491, 1587, 1666, 1680, 1800
AfiI CCNNNNNNNGG 5 cut(s) 426, 695, 776, 1019, 1922
AflIII ACRYGT 4 cut(s) 28, 196, 378, 772
AhlI ACTAGT 1 cut(s) 1259
AjnI CCWGG 4 cut(s) 185, 623, 661, 742
AjuI GAANNNNNNNTTGG 1 cut(s) 33
AluBI AGCT 4 cut(s) 971, 1165, 1216, 1544
AluI AGCT 4 cut(s) 971, 1165, 1216, 1544
Alw21I GWGCWC 1 cut(s) 1348
Alw26I GTCTC 1 cut(s) 858
AlwNI CAGNNNCTG 1 cut(s) 1802
Ama87I CYCGRG 1 cut(s) 522
AoxI GGCC 2 cut(s) 476, 497
ApeKI GCWGC 4 cut(s) 74, 933, 1090, 1174
ApoI RAATTY 9 cut(s) 16, 140, 291, 633, 749, 1121, 1189, 1534, 1555
AseI ATTAAT 2 cut(s) 798, 1404
Asp718I GGTACC 1 cut(s) 1489
AspS9I GGNCC 1 cut(s) 432
AsuC2I CCSGG 1 cut(s) 1923
AsuHPI GGTGA 5 cut(s) 1172, 1610, 1703, 1889, 2009
AvaI CYCGRG 1 cut(s) 522
AvaII GGWCC 1 cut(s) 432
BamHI GGATCC 3 cut(s) 679, 760, 844
BanI GGYRCC 2 cut(s) 4, 1489
BauI CACGAG 1 cut(s) 1105
BbsI GAAGAC 3 cut(s) 626, 927, 1809
Bbv12I GWGCWC 1 cut(s) 1348
BbvI GCAGC 4 cut(s) 86, 945, 1102, 1186
BccI CCATC 7 cut(s) 302, 602, 1091, 1202, 1304, 1334, 1499
BceAI ACGGC 1 cut(s) 570
BciT130I CCWGG 4 cut(s) 187, 625, 663, 744
BciVI GTATCC 2 cut(s) 773, 857
BcnI CCSGG 1 cut(s) 1923
BcoDI GTCTC 1 cut(s) 858
BcuI ACTAGT 1 cut(s) 1259
BfaI CTAG 2 cut(s) 510, 1260
BfmI CTRYAG 2 cut(s) 72, 1479
BfuI GTATCC 2 cut(s) 773, 857
BisI GCNGC 5 cut(s) 75, 934, 1091, 1175, 1770
BlsI GCNGC 5 cut(s) 76, 935, 1092, 1176, 1771
Bme1390I CCNGG 5 cut(s) 187, 625, 663, 744, 1923
Bme18I GGWCC 1 cut(s) 432
BmeT110I CYCGRG 1 cut(s) 522
BmgT120I GGNCC 1 cut(s) 432
BmiI GGNNCC 5 cut(s) 6, 681, 762, 846, 1491
BmrFI CCNGG 5 cut(s) 187, 625, 663, 744, 1923
BmrI ACTGGG 1 cut(s) 1278
BmsI GCATC 5 cut(s) 183, 342, 1279, 1795, 1888
BmuI ACTGGG 1 cut(s) 1278
BpiI GAAGAC 3 cut(s) 626, 927, 1809
BpmI CTGGAG 1 cut(s) 169
Bpu10I CCTNAGC 4 cut(s) 1212, 1545, 1638, 1731
BpuMI CCSGG 1 cut(s) 1923
Bsa29I ATCGAT 2 cut(s) 96, 2014
BsaAI YACGTR 1 cut(s) 29
BsaBI GATNNNNATC 1 cut(s) 1605
BsaJI CCNNGG 2 cut(s) 624, 1922
BsaWI WCCGGW 1 cut(s) 419
Bsc4I CCNNNNNNNGG 5 cut(s) 426, 695, 776, 1019, 1922
Bse1I ACTGG 4 cut(s) 1175, 1230, 1273, 1796
Bse3DI GCAATG 1 cut(s) 319
Bse8I GATNNNNATC 1 cut(s) 1605
BseBI CCWGG 4 cut(s) 187, 625, 663, 744
BseCI ATCGAT 2 cut(s) 96, 2014
BseDI CCNNGG 2 cut(s) 624, 1922
BseGI GGATG 7 cut(s) 613, 1194, 1234, 1312, 1454, 1655, 1975
BseJI GATNNNNATC 1 cut(s) 1605
BseLI CCNNNNNNNGG 5 cut(s) 426, 695, 776, 1019, 1922
BseMI GCAATG 1 cut(s) 319
BseNI ACTGG 4 cut(s) 1175, 1230, 1273, 1796
BseXI GCAGC 4 cut(s) 86, 945, 1102, 1186
BseYI CCCAGC 3 cut(s) 675, 756, 840
BsgI GTGCAG 2 cut(s) 53, 1109
BshFI GGCC 2 cut(s) 478, 499
BshNI GGYRCC 2 cut(s) 4, 1489
BshVI ATCGAT 2 cut(s) 96, 2014
BsiHKAI GWGCWC 1 cut(s) 1348
BsiHKCI CYCGRG 1 cut(s) 522
BsiSI CCGG 2 cut(s) 420, 1922
BslFI GGGAC 1 cut(s) 1285
BslI CCNNNNNNNGG 5 cut(s) 426, 695, 776, 1019, 1922
BsmAI GTCTC 1 cut(s) 858
BsmFI GGGAC 1 cut(s) 1285
BsmI GAATGC 1 cut(s) 1205
BsnI GGCC 2 cut(s) 478, 499
BsoBI CYCGRG 1 cut(s) 522
Bsp1286I GDGCHC 1 cut(s) 1348
BspACI CCGC 4 cut(s) 816, 1013, 1523, 1769
BspANI GGCC 2 cut(s) 478, 499
BspDI ATCGAT 2 cut(s) 96, 2014
BspLI GGNNCC 5 cut(s) 6, 681, 762, 846, 1491
BspMAI CTGCAG 1 cut(s) 76
BspT107I GGYRCC 2 cut(s) 4, 1489
BsrBI CCGCTC 1 cut(s) 818
BsrDI GCAATG 1 cut(s) 319
BsrI ACTGG 4 cut(s) 1175, 1230, 1273, 1796
BssECI CCNNGG 2 cut(s) 624, 1922
BssNAI GTATAC 1 cut(s) 596
BssSI CACGAG 1 cut(s) 1105
Bst1107I GTATAC 1 cut(s) 596
Bst2BI CACGAG 1 cut(s) 1105
Bst2UI CCWGG 4 cut(s) 187, 625, 663, 744
Bst4CI ACNGT 4 cut(s) 120, 926, 1483, 1576
Bst6I CTCTTC 2 cut(s) 741, 1823
BstAPI GCANNNNNTGC 1 cut(s) 180
BstBAI YACGTR 1 cut(s) 29
BstC8I GCNNGC 3 cut(s) 391, 1179, 1432
BstF5I GGATG 7 cut(s) 613, 1194, 1234, 1312, 1454, 1655, 1975
BstMAI GTCTC 1 cut(s) 858
BstMWI GCNNNNNNNGC 5 cut(s) 180, 489, 582, 824, 1171
BstNI CCWGG 4 cut(s) 187, 625, 663, 744
BstNSI RCATGY 5 cut(s) 81, 200, 382, 776, 1776
BstSCI CCNGG 5 cut(s) 185, 623, 661, 742, 1921
BstSFI CTRYAG 2 cut(s) 72, 1479
BstV1I GCAGC 4 cut(s) 86, 945, 1102, 1186
BstV2I GAAGAC 3 cut(s) 626, 927, 1809
BstX2I RGATCY 4 cut(s) 238, 679, 760, 844
BstYI RGATCY 4 cut(s) 238, 679, 760, 844
BstZ17I GTATAC 1 cut(s) 596
Bsu15I ATCGAT 2 cut(s) 96, 2014
BsuI GTATCC 2 cut(s) 773, 857
BsuRI GGCC 2 cut(s) 478, 499
BsuTUI ATCGAT 2 cut(s) 96, 2014
BtsCI GGATG 7 cut(s) 613, 1194, 1234, 1312, 1454, 1655, 1975
BtsI GCAGTG 1 cut(s) 214
BtsIMutI CAGTG 5 cut(s) 214, 867, 1223, 1488, 1990
Cac8I GCNNGC 3 cut(s) 391, 1179, 1432
CaiI CAGNNNCTG 1 cut(s) 1802
Cfr13I GGNCC 1 cut(s) 432
ClaI ATCGAT 2 cut(s) 96, 2014
CseI GACGC 1 cut(s) 708
Csp6I GTAC 6 cut(s) 26, 1490, 1586, 1665, 1679, 1799
CviQI GTAC 6 cut(s) 26, 1490, 1586, 1665, 1679, 1799
Eam1104I CTCTTC 2 cut(s) 741, 1823
EarI CTCTTC 2 cut(s) 741, 1823
Eco147I AGGCCT 1 cut(s) 499
Eco32I GATATC 1 cut(s) 1234
Eco47I GGWCC 1 cut(s) 432
Eco57I CTGAAG 2 cut(s) 975, 1524
Eco88I CYCGRG 1 cut(s) 522
EcoRI GAATTC 1 cut(s) 1189
EcoRII CCWGG 4 cut(s) 185, 623, 661, 742
EcoRV GATATC 1 cut(s) 1234
EcoT22I ATGCAT 1 cut(s) 1207
FalI AAGNNNNNCTT 2 cut(s) 1139, 1171
FaqI GGGAC 1 cut(s) 1285
FauNDI CATATG 1 cut(s) 343
FblI GTMKAC 2 cut(s) 111, 595
Fnu4HI GCNGC 5 cut(s) 75, 934, 1091, 1175, 1770
FokI GGATG 7 cut(s) 620, 1181, 1241, 1319, 1441, 1642, 1982
Fsp4HI GCNGC 5 cut(s) 75, 934, 1091, 1175, 1770
FspBI CTAG 2 cut(s) 510, 1260
GluI GCNGC 5 cut(s) 75, 934, 1091, 1175, 1770
GsaI CCCAGC 3 cut(s) 679, 760, 844
GsuI CTGGAG 1 cut(s) 169
HaeIII GGCC 2 cut(s) 478, 499
HapII CCGG 2 cut(s) 420, 1922
HgaI GACGC 1 cut(s) 708
HincII GTYRAC 2 cut(s) 112, 2027
HindII GTYRAC 2 cut(s) 112, 2027
HindIII AAGCTT 1 cut(s) 969
HpaII CCGG 2 cut(s) 420, 1922
HphI GGTGA 5 cut(s) 1172, 1610, 1703, 1889, 2009
Hpy166II GTNNAC 4 cut(s) 58, 112, 596, 2027
Hpy188III TCNNGA 7 cut(s) 236, 639, 953, 1640, 1733, 1958, 1967
Hpy8I GTNNAC 4 cut(s) 58, 112, 596, 2027
Hpy99I CGWCG 2 cut(s) 116, 825
HpyAV CCTTC 4 cut(s) 958, 1480, 1967, 1988
HpyCH4III ACNGT 4 cut(s) 120, 926, 1483, 1576
HpyCH4IV ACGT 2 cut(s) 28, 1047
HpyF10VI GCNNNNNNNGC 5 cut(s) 180, 489, 582, 824, 1171
HpySE526I ACGT 2 cut(s) 28, 1047
KpnI GGTACC 1 cut(s) 1493
LmnI GCTCC 3 cut(s) 188, 955, 1343
Lsp1109I GCAGC 4 cut(s) 86, 945, 1102, 1186
LweI GCATC 5 cut(s) 183, 342, 1279, 1795, 1888
MaeI CTAG 2 cut(s) 510, 1260
MaeII ACGT 2 cut(s) 28, 1047
MaeIII GTNAC 5 cut(s) 251, 646, 1048, 1612, 1891
MbiI CCGCTC 1 cut(s) 818
MflI RGATCY 4 cut(s) 238, 679, 760, 844
MhlI GDGCHC 1 cut(s) 1348
MlyI GAGTC 4 cut(s) 722, 1192, 1433, 1520
MmeI TCCRAC 2 cut(s) 171, 378
Mph1103I ATGCAT 1 cut(s) 1207
MseI TTAA 7 cut(s) 798, 1167, 1245, 1328, 1404, 1467, 1929
MslI CAYNNNNRTG 2 cut(s) 82, 1404
MspA1I CMGCKG 2 cut(s) 1523, 1769
MspI CCGG 2 cut(s) 420, 1922
MspR9I CCNGG 5 cut(s) 187, 625, 663, 744, 1923
Mva1269I GAATGC 1 cut(s) 1205
MvaI CCWGG 4 cut(s) 187, 625, 663, 744
MwoI GCNNNNNNNGC 5 cut(s) 180, 489, 582, 824, 1171
NciI CCSGG 1 cut(s) 1923
NdeI CATATG 1 cut(s) 343
NlaIV GGNNCC 5 cut(s) 6, 681, 762, 846, 1491
NsiI ATGCAT 1 cut(s) 1207
NspI RCATGY 5 cut(s) 81, 200, 382, 776, 1776
PaeR7I CTCGAG 1 cut(s) 522
PceI AGGCCT 1 cut(s) 499
PciI ACATGT 3 cut(s) 196, 378, 772
PcsI WCGNNNNNNNCGW 1 cut(s) 1053
PctI GAATGC 1 cut(s) 1205
PfeI GAWTC 7 cut(s) 401, 812, 896, 904, 1027, 1949, 1961
PfoI TCCNGGA 2 cut(s) 661, 742
PkrI GCNGC 5 cut(s) 76, 935, 1092, 1176, 1771
PleI GAGTC 4 cut(s) 722, 1191, 1432, 1520
PpsI GAGTC 4 cut(s) 722, 1191, 1432, 1520
Ppu21I YACGTR 1 cut(s) 29
PscI ACATGT 3 cut(s) 196, 378, 772
PshBI ATTAAT 2 cut(s) 798, 1404
Psp1406I AACGTT 1 cut(s) 1047
Psp6I CCWGG 4 cut(s) 185, 623, 661, 742
PspFI CCCAGC 3 cut(s) 675, 756, 840
PspGI CCWGG 4 cut(s) 185, 623, 661, 742
PspN4I GGNNCC 5 cut(s) 6, 681, 762, 846, 1491
PspPI GGNCC 1 cut(s) 432
PspXI VCTCGAGB 1 cut(s) 522
PstI CTGCAG 1 cut(s) 76
PstNI CAGNNNCTG 1 cut(s) 1802
PsuI RGATCY 4 cut(s) 238, 679, 760, 844
RsaI GTAC 6 cut(s) 27, 1491, 1587, 1666, 1680, 1800
RsaNI GTAC 6 cut(s) 26, 1490, 1586, 1665, 1679, 1799
RseI CAYNNNNRTG 2 cut(s) 82, 1404
SalI GTCGAC 1 cut(s) 110
SaqAI TTAA 7 cut(s) 798, 1167, 1245, 1328, 1404, 1467, 1929
SatI GCNGC 5 cut(s) 75, 934, 1091, 1175, 1770
Sau96I GGNCC 1 cut(s) 432
SchI GAGTC 4 cut(s) 722, 1192, 1433, 1520
ScrFI CCNGG 5 cut(s) 187, 625, 663, 744, 1923
SduI GDGCHC 1 cut(s) 1348
SfaNI GCATC 5 cut(s) 183, 342, 1279, 1795, 1888
SfcI CTRYAG 2 cut(s) 72, 1479
Sfr274I CTCGAG 1 cut(s) 522
SinI GGWCC 1 cut(s) 432
SlaI CTCGAG 1 cut(s) 522
SmiMI CAYNNNNRTG 2 cut(s) 82, 1404
SmlI CTYRAG 1 cut(s) 522
SmoI CTYRAG 1 cut(s) 522
SpeI ACTAGT 1 cut(s) 1259
SseBI AGGCCT 1 cut(s) 499
SsiI CCGC 4 cut(s) 816, 1013, 1523, 1769
SspI AATATT 2 cut(s) 152, 562
SspMI CTAG 2 cut(s) 510, 1260
StuI AGGCCT 1 cut(s) 499
StyD4I CCNGG 5 cut(s) 185, 623, 661, 742, 1921
TaaI ACNGT 4 cut(s) 120, 926, 1483, 1576
TaiI ACGT 2 cut(s) 31, 1050
TaqI TCGA 5 cut(s) 96, 111, 523, 1133, 2014
TatI WGTACW 1 cut(s) 1664
TauI GCSGC 1 cut(s) 1772
TfiI GAWTC 7 cut(s) 401, 812, 896, 904, 1027, 1949, 1961
Tru1I TTAA 7 cut(s) 798, 1167, 1245, 1328, 1404, 1467, 1929
Tru9I TTAA 7 cut(s) 798, 1167, 1245, 1328, 1404, 1467, 1929
TscAI CASTG 5 cut(s) 214, 874, 1230, 1488, 1990
TseI GCWGC 4 cut(s) 74, 933, 1090, 1174
TspGWI ACGGA 1 cut(s) 129
TspRI CASTG 5 cut(s) 214, 874, 1230, 1488, 1990
VpaK11BI GGWCC 1 cut(s) 432
VspI ATTAAT 2 cut(s) 798, 1404
XapI RAATTY 9 cut(s) 16, 140, 291, 633, 749, 1121, 1189, 1534, 1555
XceI RCATGY 5 cut(s) 81, 200, 382, 776, 1776
XhoI CTCGAG 1 cut(s) 522
XmiI GTMKAC 2 cut(s) 111, 595
XspI CTAG 2 cut(s) 510, 1260
Zsp2I ATGCAT 1 cut(s) 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.