Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0005668

Physical Location & Seq

Genomic Coordinates Reverse (-)

13536848 .. 13540663

Gene Structure 3816 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGGATCCACCAAACGAATTCCCCGATGATTTTTCTTCCTTCCCTCCGATCCCCTTCGCCCTTTTTGTGCCCCCAGAAAACCCAATCCCTAACCCTAATTCAATCGCGGGGCCGATCCCAAACACTGTCGAAAACCCTAGCTCCGCCCATCTTCTTTCCTTCGCGGTCCCCAAGAAACGAAGACGCGGCAGGCCTCATCGCGTCGCGACGTCGTTTCAGCTACCTCTGATTCCCAACGGGGCTTTGAACGGTAATGGTAACGGTCTTGCTTCTTCTTCTAGTTCAATTTCAGCTCATTCGACCAGACATAATGTAGCAAACCCTAGTTCTTCGGCAAGAACCGTGCCTGATATCTCCGATGAGATCATTGTGATCAATAAGGATTCCACAGCCGAGGCGCTGATCGCGCTCTCGGCTGGTTTTCCCGCTGATTCCCTCACTGAAGAGGAAATCGATTTCGGGGTAATTCGAGTTATTGGCGGAATAGAGCAGGTCAATTACATTCTCATTAGAAACCATATAATTGCTAGATGGCGCGAAAATGTGTCGAATTGGGTCACTAAAGAGATGTTTGTTGATTCTATACCGAAGCATTACCATTCCCTTTTGGACTCGACTTACAAGTATCTAGTTTCACATGGATATATTAACTTTGGGGTTGCCCCGGCTATCAAAGAGAAGATTCCGGCTGAACCCAGTAAACCACATGTGATTGTGATTGGTGCTGGGCTCGCTGGTCTGGCTGCTGCCAGGCAAATGATGCGTTTTGGGTTTAAAGTGACTGTTTTAGAAGGCAGGAAGCGTGCAGGTGGACGGGTTTATACAAAGAAAATGGAGGGAGGAATTCGGGTAAGTGCAGCTGCGGATTTAGGTGGAAGTGTTTTAACTGGCACATTAGGGAACCCACTCGGCATTGTTGCACGCCAGTTGGGTGACGTGCTTCATAAAGTGAGAGACAAGTGCCCGCTTTATAGTTTAGATGGGAAGCCTGTAGATCCTGATATGGATATGAAGGTGGAAGCAGCTTTTAACCGTCTGTTAGATAAGGCAAGTACCCTTAGGCAGTTAATGGGGGGTGTTTCAGTTGATGTGTCTCTTGGTGCAGCACTGGAAACGTTCTGGGATGCAGTGAATGCTGAGGAGACAAACTTGTTTAATTGGCATCTTGCAAATTTGGAATATGCAAATGCAGGGTTAATATCTAAACTGTCACTTGCATTTTGGGACCAAGATGATCCATATGATATGGGAGGGGACCATTGCTTCTTGCCTGGAGGTAATGGAAGACTGGTGCAGGCTTTGGCAGAGAATGTGCCGATATTATATGAGAGAGTGGTGAATACCGTTAGGTATGGTAGTGACGGAGTGCAGGTTATTGCTGGCAACCAGGTTTTTAAGGGTGATATGGCTTTGTGCACTGTTCCACTTGGGGTTTTGAAGAGTGGGTCCATCAAGTTTAATCCAGAGTTGCCTCAGAGGAAGCTTGATGGAATAAAGAGGTTGGGGTTCGGACTGTTGAATAAGGTTGCAATGCTTTTTCCTCATGTGTTTTGGGGCACAGATCTTGAGACCTTTGGCCACCTTTCCGATGATCCAAGCCGTCGTGGGGAGTTCTTCCTGTTTTACAGCTATGCAACAGTTGCTGGCGGTCCCCTTTTGATTGCTTTAGTAGCAGGTGAAGCAGCACATAAGTTTGAGACCATGCCCCCTACAGATGCTGTGACCCGGGTTATTCAGATTCTCAAGGGTATTTATGAACCACAAGGAATTACTGTCCCAGAGCCCATCCAAACAATCTGTACCAGATGGGGAAGTGATCCCTTCAGCCTAGGGTCTTATTCTAATGTTGCAGTAGGGGCATCAGGAGACGATTATGATATTTTAGCAGAAAGTGTAGGAGATGGACGACTTTTCTTTGCTGGTGAGGCTACCAATCGGAGATATCCTGCAACCATGCATGGTGCCTTTCTTAGTGGGCTCAGAGAAGCCGCCAATATGGCTCACTATGCTAATGCTCGAGCCCTGAGGATAAAAATTAACAGGAACCCATCAAAGAACGCCCATTCTTGTGCTTCCGTCCTTGCAGATTTATTTAGGGAGCCTGATTTAGAATTTGGGAGTTTTTCTGTTATTTTTGGTCGAAGGAATGCTGATCCTAAGTCGACGGCAGTATTAAGAGTGACATTTAATGAGCCTCGAAAGAAGAGTCATGACAGTTCAAACCCTGATCAGCCGCATTCAAATAAGTTACTTTTTCAACAGCTTCAGTCACATTTCAATCAACAACAGCAGCTTCATGTTTACACTTTGTTATCTAGGCAGCAGGCTCTTGACCTCAGAGAGGTGCGAGGGGGTGATGAGATGAGGTTAAATTACCTCTGTGAAAATCTGGGAGTGAAGCTGGTGGGGAGAAAAGGATTGGGGCCTACTGCTGATTCTGTAATTGCCTTGATAAAAGCTGAGAGAGGTAATCGCAAACCTGCTTCAACTTCATTGGCTTTAAAGTCCGGGACATCAAAGCTGAAAGCTGGCAATTTGAAAAAAAAATTAGTCAGAAGGGCCAAAATAATACGCGCTGGTAATGGGTCAGCCCCTTCTGCTAATTCAAACTTGGTTAATGGTAAAGTGTCAGACGAAACTACCACAAGTCAGGCTCCCTCCAGCACACTTGGTCCAGGGCAAAACGATTCTGACATGTTGAAGAATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009987 GO:0010228 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0035601 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048608 GO:0048731 GO:0048856 GO:0051276 GO:0061458 GO:0071704 GO:0071840 GO:0098732 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

904

Amino Acids

97.84

Weight (kDa)

8.93

Isoelectric Point (pI)

34.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	144 - 218	1.3e-14	SWIRM domain
Pyr_redox_2	PF07992	236 - 280	9.9e-06	Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_8	PF13450	239 - 296	4.6e-10	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	244 - 666	9.8e-80	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005668)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10390 AT3G10390 AT3G10390 AT3G10390
fragaria_vesca	FvH4_7g18750 FvH4_7g18750 FvH4_7g18750 FvH4_7g18750
malus_domestica	MD01G1103000.v1.1
prunus_persica	Prupe.2G208600_v2.0.a1 Prupe.2G208600_v2.0.a1
pyrus_communis	pycom01g12950 pycom07g16350
rosa_chinensis	RchiOBHm_Chr1g0362561
rosa_laevigata	RLG00000027639
rosa_multiflora	Rmu_sc0005725.1_g000006
rosa_roxburghii	Rroxscaffold_4G00293970
rosa_rugosa	Rorug01G0299000 Rorug01G0299100 Rorug01G0299200 Rorug01G0299300 Rorug01G0299300 Rorug01G0299400
rosa_samantha	Rh1AG308200 Rh1BG271200 Rh1CG289100 Rh1DG301600
rosa_wichuraiana	Rw1G027350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	797, 1664
AatII	GACGTC	1 cut(s)	212
Acc36I	ACCTGC	5 cut(s)	481, 797, 1360, 1664, 2488
AccB1I	GGYRCC	1 cut(s)	1961
AccI	GTMKAC	1 cut(s)	2162
AccII	CGCG	8 cut(s)	107, 164, 186, 201, 206, 407, 537, 2574
AclI	AACGTT	1 cut(s)	1115
AclWI	GGATC	8 cut(s)	12, 43, 109, 989, 1229, 1586, 1811, 2147
AcoI	YGGCCR	1 cut(s)	1576
AcsI	RAATTY	4 cut(s)	17, 843, 1171, 2111
AcuI	CTGAAG	3 cut(s)	462, 1807, 2249
AcyI	GRCGYC	1 cut(s)	209
AfaI	GTAC	2 cut(s)	1054, 1801
AfiI	CCNNNNNNNGG	2 cut(s)	1606, 2341
AflIII	ACRYGT	2 cut(s)	706, 2694
AjiI	CACGTC	1 cut(s)	937
AjnI	CCWGG	4 cut(s)	749, 1270, 1386, 2674
Alw21I	GWGCWC	1 cut(s)	1418
Alw26I	GTCTC	6 cut(s)	948, 1098, 1136, 1562, 1691, 1860
Alw44I	GTGCAC	1 cut(s)	1414
AlwI	GGATC	8 cut(s)	12, 43, 109, 989, 1229, 1586, 1811, 2147
AlwNI	CAGNNNCTG	2 cut(s)	1643, 1718
Ama87I	CYCGRG	2 cut(s)	1725, 2016
AoxI	GGCC	5 cut(s)	110, 191, 1576, 2423, 2559
ApaLI	GTGCAC	1 cut(s)	1414
ApeKI	GCWGC	9 cut(s)	743, 746, 857, 860, 1022, 1103, 1682, 2290, 2320
ApoI	RAATTY	4 cut(s)	17, 843, 1171, 2111
ArsI	GACNNNNNNTTYG	2 cut(s)	2191, 2223
AspA2I	CCTAGG	1 cut(s)	1828
AspLEI	GCGC	4 cut(s)	400, 409, 537, 2576
AspS9I	GGNCC	9 cut(s)	110, 166, 1225, 1255, 1446, 1649, 2423, 2559, 2672
AsuC2I	CCSGG	4 cut(s)	665, 1726, 1727, 2509
AsuHPI	GGTGA	6 cut(s)	944, 1348, 1412, 1688, 1934, 2366
AvaI	CYCGRG	2 cut(s)	1725, 2016
AvaII	GGWCC	6 cut(s)	166, 1225, 1255, 1446, 1649, 2672
AvrII	CCTAGG	1 cut(s)	1828
AxyI	CCTNAGG	2 cut(s)	1058, 2024
BaeGI	GKGCMC	4 cut(s)	72, 965, 1418, 1559
BalI	TGGCCA	1 cut(s)	1578
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	1 cut(s)	1961
BanII	GRGCYC	4 cut(s)	732, 1785, 1980, 2023
BbsI	GAAGAC	2 cut(s)	187, 1291
Bbv12I	GWGCWC	1 cut(s)	1418
BbvCI	CCTCAGC	1 cut(s)	1137
BbvI	GCAGC	9 cut(s)	730, 733, 847, 869, 1034, 1115, 1694, 2302, 2332
BccI	CCATC	9 cut(s)	156, 525, 974, 1457, 1481, 1793, 1800, 1895, 2056
BceAI	ACGGC	2 cut(s)	1584, 2181
BciT130I	CCWGG	4 cut(s)	751, 1272, 1388, 2676
BclI	TGATCA	2 cut(s)	372, 2227
BcnI	CCSGG	4 cut(s)	665, 1726, 1727, 2509
BcoDI	GTCTC	6 cut(s)	948, 1098, 1136, 1562, 1691, 1860
BfaI	CTAG	8 cut(s)	138, 279, 324, 528, 629, 1829, 2316, 2710
BfmI	CTRYAG	2 cut(s)	990, 1710
BfoI	RGCGCY	1 cut(s)	401
BfuAI	ACCTGC	5 cut(s)	481, 797, 1360, 1664, 2488
BglI	GCCNNNNNGGC	1 cut(s)	1997
BglII	AGATCT	1 cut(s)	1561
BlnI	CCTAGG	1 cut(s)	1828
Bme1390I	CCNGG	8 cut(s)	665, 751, 1272, 1388, 1726, 1727, 2509, 2676
Bme18I	GGWCC	6 cut(s)	166, 1225, 1255, 1446, 1649, 2672
BmeT110I	CYCGRG	2 cut(s)	1725, 2016
BmgBI	CACGTC	1 cut(s)	937
BmgT120I	GGNCC	9 cut(s)	110, 166, 1225, 1255, 1446, 1649, 2423, 2559, 2672
BmrFI	CCNGG	8 cut(s)	665, 751, 1272, 1388, 1726, 1727, 2509, 2676
BmrI	ACTGGG	1 cut(s)	690
BmsI	GCATC	5 cut(s)	750, 1114, 1171, 1705, 1868
BmuI	ACTGGG	1 cut(s)	690
BpiI	GAAGAC	2 cut(s)	187, 1291
BpmI	CTGGAG	2 cut(s)	1293, 2644
Bpu10I	CCTNAGC	1 cut(s)	1137
BpuEI	CTTGAG	2 cut(s)	1586, 1727
BpuMI	CCSGG	4 cut(s)	665, 1726, 1727, 2509
Bsa29I	ATCGAT	1 cut(s)	453
BsaHI	GRCGYC	1 cut(s)	209
BsaI	GGTCTC	2 cut(s)	1562, 1691
BsaJI	CCNNGG	5 cut(s)	393, 663, 1725, 1828, 2675
BsaXI	ACNNNNNCTCC	4 cut(s)	125, 155, 1356, 1386
Bsc4I	CCNNNNNNNGG	2 cut(s)	1606, 2341
Bse1I	ACTGG	5 cut(s)	696, 892, 925, 1113, 1293
Bse21I	CCTNAGG	2 cut(s)	1058, 2024
Bse3DI	GCAATG	2 cut(s)	1258, 1536
BseBI	CCWGG	4 cut(s)	751, 1272, 1388, 2676
BseCI	ATCGAT	1 cut(s)	453
BseDI	CCNNGG	5 cut(s)	393, 663, 1725, 1828, 2675
BseGI	GGATG	2 cut(s)	1129, 1785
BseLI	CCNNNNNNNGG	2 cut(s)	1606, 2341
BseMI	GCAATG	2 cut(s)	1258, 1536
BseMII	CTCAG	6 cut(s)	1128, 1487, 1993, 2015, 2350, 2451
BseNI	ACTGG	5 cut(s)	696, 892, 925, 1113, 1293
BseRI	GAGGAG	1 cut(s)	1154
BseSI	GKGCMC	4 cut(s)	72, 965, 1418, 1559
BseXI	GCAGC	9 cut(s)	730, 733, 847, 869, 1034, 1115, 1694, 2302, 2332
BseYI	CCCAGC	1 cut(s)	725
BsgI	GTGCAG	5 cut(s)	825, 876, 1122, 1313, 1388
Bsh1236I	CGCG	8 cut(s)	107, 164, 186, 201, 206, 407, 537, 2574
BshFI	GGCC	5 cut(s)	112, 193, 1578, 2425, 2561
BshNI	GGYRCC	1 cut(s)	1961
BshVI	ATCGAT	1 cut(s)	453
BsiHKAI	GWGCWC	1 cut(s)	1418
BsiHKCI	CYCGRG	2 cut(s)	1725, 2016
BsiSI	CCGG	4 cut(s)	665, 686, 1726, 2508
BslFI	GGGAC	6 cut(s)	152, 1238, 1268, 1635, 1760, 2524
BslI	CCNNNNNNNGG	2 cut(s)	1606, 2341
BsmAI	GTCTC	6 cut(s)	948, 1098, 1136, 1562, 1691, 1860
BsmBI	CGTCTC	1 cut(s)	1860
BsmFI	GGGAC	6 cut(s)	152, 1238, 1268, 1635, 1760, 2524
BsmI	GAATGC	3 cut(s)	1138, 2152, 2236
BsnI	GGCC	5 cut(s)	112, 193, 1578, 2425, 2561
Bso31I	GGTCTC	2 cut(s)	1562, 1691
BsoBI	CYCGRG	2 cut(s)	1725, 2016
Bsp1286I	GDGCHC	8 cut(s)	72, 732, 965, 1418, 1559, 1785, 1980, 2023
Bsp68I	TCGCGA	1 cut(s)	206
BspANI	GGCC	5 cut(s)	112, 193, 1578, 2425, 2561
BspCNI	CTCAG	6 cut(s)	1129, 1486, 1992, 2016, 2349, 2452
BspDI	ATCGAT	1 cut(s)	453
BspFNI	CGCG	8 cut(s)	107, 164, 186, 201, 206, 407, 537, 2574
BspHI	TCATGA	1 cut(s)	2209
BspMI	ACCTGC	5 cut(s)	481, 797, 1360, 1664, 2488
BspPI	GGATC	8 cut(s)	12, 43, 109, 989, 1229, 1586, 1811, 2147
BspT107I	GGYRCC	1 cut(s)	1961
BspTNI	GGTCTC	2 cut(s)	1562, 1691
BsrDI	GCAATG	2 cut(s)	1258, 1536
BsrI	ACTGG	5 cut(s)	696, 892, 925, 1113, 1293
BssECI	CCNNGG	5 cut(s)	393, 663, 1725, 1828, 2675
BssNI	GRCGYC	1 cut(s)	209
BssT1I	CCWWGG	1 cut(s)	1828
Bst2UI	CCWGG	4 cut(s)	751, 1272, 1388, 2676
Bst6I	CTCTTC	3 cut(s)	438, 1433, 2198
BstACI	GRCGYC	1 cut(s)	209
BstAPI	GCANNNNNTGC	3 cut(s)	760, 1133, 1640
BstDEI	CTNAG	9 cut(s)	1058, 1137, 1473, 1970, 1979, 2024, 2157, 2336, 2460
BstENI	CCTNNNNNAGG	1 cut(s)	2339
BstF5I	GGATG	2 cut(s)	1129, 1785
BstFNI	CGCG	8 cut(s)	107, 164, 186, 201, 206, 407, 537, 2574
BstH2I	RGCGCY	1 cut(s)	401
BstHHI	GCGC	4 cut(s)	400, 409, 537, 2576
BstMAI	GTCTC	6 cut(s)	948, 1098, 1136, 1562, 1691, 1860
BstNI	CCWGG	4 cut(s)	751, 1272, 1388, 2676
BstNSI	RCATGY	2 cut(s)	710, 2698
BstSCI	CCNGG	8 cut(s)	663, 749, 1270, 1386, 1724, 1725, 2507, 2674
BstSFI	CTRYAG	2 cut(s)	990, 1710
BstSLI	GKGCMC	4 cut(s)	72, 965, 1418, 1559
BstUI	CGCG	8 cut(s)	107, 164, 186, 201, 206, 407, 537, 2574
BstV1I	GCAGC	9 cut(s)	730, 733, 847, 869, 1034, 1115, 1694, 2302, 2332
BstV2I	GAAGAC	2 cut(s)	187, 1291
BstX2I	RGATCY	3 cut(s)	4, 994, 1561
BstYI	RGATCY	3 cut(s)	4, 994, 1561
Bsu15I	ATCGAT	1 cut(s)	453
Bsu36I	CCTNAGG	2 cut(s)	1058, 2024
BsuRI	GGCC	5 cut(s)	112, 193, 1578, 2425, 2561
BsuTUI	ATCGAT	1 cut(s)	453
BtgZI	GCGATG	1 cut(s)	182
BtrI	CACGTC	1 cut(s)	937
BtsCI	GGATG	2 cut(s)	1129, 1785
BtsI	GCAGTG	1 cut(s)	1134
BtsIMutI	CAGTG	5 cut(s)	123, 438, 1106, 1134, 1416
BtuMI	TCGCGA	1 cut(s)	206
BveI	ACCTGC	5 cut(s)	481, 797, 1360, 1664, 2488
CaiI	CAGNNNCTG	2 cut(s)	1643, 1718
CciI	TCATGA	1 cut(s)	2209
CfoI	GCGC	4 cut(s)	400, 409, 537, 2576
Cfr13I	GGNCC	9 cut(s)	110, 166, 1225, 1255, 1446, 1649, 2423, 2559, 2672
Cfr9I	CCCGGG	1 cut(s)	1725
ClaI	ATCGAT	1 cut(s)	453
CseI	GACGC	2 cut(s)	190, 192
CsiI	ACCWGGT	1 cut(s)	1386
Csp6I	GTAC	2 cut(s)	1053, 1800
CviAII	CATG	9 cut(s)	638, 707, 1544, 1702, 1954, 1958, 2210, 2297, 2695
CviQI	GTAC	2 cut(s)	1053, 1800
DdeI	CTNAG	9 cut(s)	1058, 1137, 1473, 1970, 1979, 2024, 2157, 2336, 2460
DraI	TTTAAA	2 cut(s)	775, 2502
EaeI	YGGCCR	1 cut(s)	1576
Eam1104I	CTCTTC	3 cut(s)	438, 1433, 2198
EarI	CTCTTC	3 cut(s)	438, 1433, 2198
EciI	GGCGGA	2 cut(s)	133, 495
Eco130I	CCWWGG	1 cut(s)	1828
Eco147I	AGGCCT	1 cut(s)	193
Eco24I	GRGCYC	4 cut(s)	732, 1785, 1980, 2023
Eco31I	GGTCTC	2 cut(s)	1562, 1691
Eco32I	GATATC	2 cut(s)	352, 1943
Eco47I	GGWCC	6 cut(s)	166, 1225, 1255, 1446, 1649, 2672
Eco57I	CTGAAG	3 cut(s)	462, 1807, 2249
Eco81I	CCTNAGG	2 cut(s)	1058, 2024
Eco88I	CYCGRG	2 cut(s)	1725, 2016
EcoNI	CCTNNNNNAGG	1 cut(s)	2339
EcoO109I	RGGNCCY	1 cut(s)	2423
EcoRI	GAATTC	2 cut(s)	17, 843
EcoRII	CCWGG	4 cut(s)	749, 1270, 1386, 2674
EcoRV	GATATC	2 cut(s)	352, 1943
EcoT14I	CCWWGG	1 cut(s)	1828
EcoT22I	ATGCAT	1 cut(s)	1959
EcoT38I	GRGCYC	4 cut(s)	732, 1785, 1980, 2023
ErhI	CCWWGG	1 cut(s)	1828
Esp3I	CGTCTC	1 cut(s)	1860
FaeI	CATG	9 cut(s)	641, 710, 1547, 1705, 1957, 1961, 2213, 2300, 2698
FaqI	GGGAC	6 cut(s)	152, 1238, 1268, 1635, 1760, 2524
FatI	CATG	9 cut(s)	637, 706, 1543, 1701, 1953, 1957, 2209, 2296, 2694
FauI	CCCGC	3 cut(s)	100, 433, 972
FauNDI	CATATG	1 cut(s)	1240
FbaI	TGATCA	2 cut(s)	372, 2227
FblI	GTMKAC	1 cut(s)	2162
FokI	GGATG	2 cut(s)	1136, 1772
FriOI	GRGCYC	4 cut(s)	732, 1785, 1980, 2023
FspBI	CTAG	8 cut(s)	138, 279, 324, 528, 629, 1829, 2316, 2710
GlaI	GCGC	4 cut(s)	399, 408, 536, 2575
GsaI	CCCAGC	1 cut(s)	729
GsuI	CTGGAG	2 cut(s)	1293, 2644
HaeII	RGCGCY	1 cut(s)	401
HaeIII	GGCC	5 cut(s)	112, 193, 1578, 2425, 2561
HapII	CCGG	4 cut(s)	665, 686, 1726, 2508
HgaI	GACGC	2 cut(s)	190, 192
HhaI	GCGC	4 cut(s)	400, 409, 537, 2576
Hin1I	GRCGYC	1 cut(s)	209
Hin1II	CATG	9 cut(s)	641, 710, 1547, 1705, 1957, 1961, 2213, 2300, 2698
Hin6I	GCGC	4 cut(s)	398, 407, 535, 2574
HinP1I	GCGC	4 cut(s)	398, 407, 535, 2574
HincII	GTYRAC	1 cut(s)	2163
HindII	GTYRAC	1 cut(s)	2163
HindIII	AAGCTT	1 cut(s)	1481
HpaII	CCGG	4 cut(s)	665, 686, 1726, 2508
HphI	GGTGA	6 cut(s)	944, 1348, 1412, 1688, 1934, 2366
Hpy166II	GTNNAC	5 cut(s)	701, 812, 1416, 2163, 2302
Hpy188III	TCNNGA	7 cut(s)	205, 998, 1463, 1565, 1863, 2210, 2330
Hpy8I	GTNNAC	5 cut(s)	701, 812, 1416, 2163, 2302
Hpy99I	CGWCG	5 cut(s)	206, 211, 214, 1605, 2167
HpyAV	CCTTC	9 cut(s)	49, 64, 169, 785, 1006, 1831, 2136, 2550, 2604
HpyCH4IV	ACGT	3 cut(s)	209, 936, 1115
HpyF3I	CTNAG	9 cut(s)	1058, 1137, 1473, 1970, 1979, 2024, 2157, 2336, 2460
HpySE526I	ACGT	3 cut(s)	209, 936, 1115
Hsp92I	GRCGYC	1 cut(s)	209
Hsp92II	CATG	9 cut(s)	641, 710, 1547, 1705, 1957, 1961, 2213, 2300, 2698
HspAI	GCGC	4 cut(s)	398, 407, 535, 2574
Ksp22I	TGATCA	2 cut(s)	372, 2227
LmnI	GCTCC	3 cut(s)	146, 2098, 2659
Lsp1109I	GCAGC	9 cut(s)	730, 733, 847, 869, 1034, 1115, 1694, 2302, 2332
LweI	GCATC	5 cut(s)	750, 1114, 1171, 1705, 1868
MabI	ACCWGGT	1 cut(s)	1386
MaeI	CTAG	8 cut(s)	138, 279, 324, 528, 629, 1829, 2316, 2710
MaeII	ACGT	3 cut(s)	209, 936, 1115
MflI	RGATCY	3 cut(s)	4, 994, 1561
MhlI	GDGCHC	8 cut(s)	72, 732, 965, 1418, 1559, 1785, 1980, 2023
MlsI	TGGCCA	1 cut(s)	1578
MluNI	TGGCCA	1 cut(s)	1578
MlyI	GAGTC	2 cut(s)	605, 2215
Mox20I	TGGCCA	1 cut(s)	1578
Mph1103I	ATGCAT	1 cut(s)	1959
MscI	TGGCCA	1 cut(s)	1578
MslI	CAYNNNNRTG	1 cut(s)	2067
Msp20I	TGGCCA	1 cut(s)	1578
MspA1I	CMGCKG	2 cut(s)	428, 860
MspI	CCGG	4 cut(s)	665, 686, 1726, 2508
MspR9I	CCNGG	8 cut(s)	665, 751, 1272, 1388, 1726, 1727, 2509, 2676
Mva1269I	GAATGC	3 cut(s)	1138, 2152, 2236
MvaI	CCWGG	4 cut(s)	751, 1272, 1388, 2676
MvnI	CGCG	8 cut(s)	107, 164, 186, 201, 206, 407, 537, 2574
NciI	CCSGG	4 cut(s)	665, 1726, 1727, 2509
NdeI	CATATG	1 cut(s)	1240
NlaIII	CATG	9 cut(s)	641, 710, 1547, 1705, 1957, 1961, 2213, 2300, 2698
NmeAIII	GCCGAG	3 cut(s)	392, 418, 888
NmuCI	GTSAC	8 cut(s)	556, 778, 932, 1209, 1358, 1720, 2179, 2268
NruI	TCGCGA	1 cut(s)	206
NsiI	ATGCAT	1 cut(s)	1959
NspI	RCATGY	2 cut(s)	710, 2698
PaeR7I	CTCGAG	1 cut(s)	2016
PagI	TCATGA	1 cut(s)	2209
PaqCI	CACCTGC	2 cut(s)	797, 1664
PceI	AGGCCT	1 cut(s)	193
PciI	ACATGT	2 cut(s)	706, 2694
PcsI	WCGNNNNNNNCGW	1 cut(s)	21
PctI	GAATGC	3 cut(s)	1138, 2152, 2236
PfeI	GAWTC	8 cut(s)	229, 383, 431, 578, 682, 1738, 2435, 2687
PfoI	TCCNGGA	1 cut(s)	2507
PleI	GAGTC	2 cut(s)	605, 2214
PpsI	GAGTC	2 cut(s)	605, 2214
PscI	ACATGT	2 cut(s)	706, 2694
Psp1406I	AACGTT	1 cut(s)	1115
Psp6I	CCWGG	4 cut(s)	749, 1270, 1386, 2674
PspFI	CCCAGC	1 cut(s)	725
PspGI	CCWGG	4 cut(s)	749, 1270, 1386, 2674
PspPI	GGNCC	9 cut(s)	110, 166, 1225, 1255, 1446, 1649, 2423, 2559, 2672
PspXI	VCTCGAGB	1 cut(s)	2016
PstNI	CAGNNNCTG	2 cut(s)	1643, 1718
PsuI	RGATCY	3 cut(s)	4, 994, 1561
PvuII	CAGCTG	1 cut(s)	860
RruI	TCGCGA	1 cut(s)	206
RsaI	GTAC	2 cut(s)	1054, 1801
RsaNI	GTAC	2 cut(s)	1053, 1800
RseI	CAYNNNNRTG	1 cut(s)	2067
SalI	GTCGAC	1 cut(s)	2161
Sau96I	GGNCC	9 cut(s)	110, 166, 1225, 1255, 1446, 1649, 2423, 2559, 2672
SchI	GAGTC	2 cut(s)	605, 2215
ScrFI	CCNGG	8 cut(s)	665, 751, 1272, 1388, 1726, 1727, 2509, 2676
SduI	GDGCHC	8 cut(s)	72, 732, 965, 1418, 1559, 1785, 1980, 2023
SexAI	ACCWGGT	1 cut(s)	1386
SfaNI	GCATC	5 cut(s)	750, 1114, 1171, 1705, 1868
SfcI	CTRYAG	2 cut(s)	990, 1710
Sfr274I	CTCGAG	1 cut(s)	2016
SinI	GGWCC	6 cut(s)	166, 1225, 1255, 1446, 1649, 2672
SlaI	CTCGAG	1 cut(s)	2016
SmaI	CCCGGG	1 cut(s)	1727
SmiMI	CAYNNNNRTG	1 cut(s)	2067
SmlI	CTYRAG	3 cut(s)	1565, 1742, 2016
SmoI	CTYRAG	3 cut(s)	1565, 1742, 2016
SseBI	AGGCCT	1 cut(s)	193
SspMI	CTAG	8 cut(s)	138, 279, 324, 528, 629, 1829, 2316, 2710
StuI	AGGCCT	1 cut(s)	193
StyD4I	CCNGG	8 cut(s)	663, 749, 1270, 1386, 1724, 1725, 2507, 2674
StyI	CCWWGG	1 cut(s)	1828
TaiI	ACGT	3 cut(s)	212, 939, 1118
TauI	GCSGC	3 cut(s)	189, 1991, 2236
TfiI	GAWTC	8 cut(s)	229, 383, 431, 578, 682, 1738, 2435, 2687
TscAI	CASTG	5 cut(s)	130, 445, 1113, 1134, 1423
TseFI	GTSAC	8 cut(s)	556, 778, 932, 1209, 1358, 1720, 2179, 2268
TseI	GCWGC	9 cut(s)	743, 746, 857, 860, 1022, 1103, 1682, 2290, 2320
Tsp45I	GTSAC	8 cut(s)	556, 778, 932, 1209, 1358, 1720, 2179, 2268
TspDTI	ATGAA	5 cut(s)	932, 1025, 1770, 2285, 2481
TspGWI	ACGGA	2 cut(s)	1377, 2065
TspMI	CCCGGG	1 cut(s)	1725
TspRI	CASTG	5 cut(s)	130, 445, 1113, 1134, 1423
VneI	GTGCAC	1 cut(s)	1414
VpaK11BI	GGWCC	6 cut(s)	166, 1225, 1255, 1446, 1649, 2672
XagI	CCTNNNNNAGG	1 cut(s)	2339
XapI	RAATTY	4 cut(s)	17, 843, 1171, 2111
XceI	RCATGY	2 cut(s)	710, 2698
XhoI	CTCGAG	1 cut(s)	2016
XmaI	CCCGGG	1 cut(s)	1725
XmaJI	CCTAGG	1 cut(s)	1828
XmiI	GTMKAC	1 cut(s)	2162
XspI	CTAG	8 cut(s)	138, 279, 324, 528, 629, 1829, 2316, 2710
ZraI	GACGTC	1 cut(s)	210
Zsp2I	ATGCAT	1 cut(s)	1959

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.