pycom01g14890

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0012338
Physical Location & Seq
Forward (+)
14949540 .. 14952961
3422 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g14890.4

Sequence Viewer

Length: 2097 bp
ATGTATTCGGTTGGTTACAAAGAAACCTCAGGCCAACGCGTCTCGGCTTTTGGCGGCTTGGTCCCTCTTCCCCACTCTTCCTCTTCAGAGTTCAGTTCAAGCTATTGCTTCGGAAGAGTTGCAGAGATGGTTTTGTCTAACAGGAAGCTGAAGCAAAAGCTCAGGGAAAAGCTAGCTCAGTCGATAGTAGAATCGGTAGGTAAGCCTAAAACCGACCCGACAAATGATGGGTCGGAAAACCCAGACCCGAAATCGACCCCCCGGTCGCTGAAAGTGCTTTTGGACTCCGCAACCCAGAAACCCAGATTGTCCAAGCGGGAAAAACGGAGAACGATCCTGTCTTTGCGAGGTCCAGAGGTGGTGAGTGTGAATGGCAGTGGTGGTAATTTGAGGGGAAACAAGGGGGAGGAAAGGAAGAGCGATATGGGTTCAGATGAGGAGGAGGAGGATGAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGAGATGAGGGGGAACAAGATGGAGACTTGAGTGCAGAGGAAAATGGTGTTGGGAAGAAGGAGAGTAAGAAGCCAAAGAAGAAGAATAAAAAGAAGAAGAGGAAGACGGAGGCGAAAACCGAGGAAGAGAATAAGGGCGGTGAGCTTGAGAATGGAAAGCAAATTGTCCAGGAGACAGATATGAGCATTGACAGGCAAGCAAGTGGGGATGTTCTGACAAAAGTTTATGTGGGAGGCATTCCTTATTACTCGACCGAGGATGATATTCGAAGTTACCTTGAAAGCTGCGGTACAATAACTGAAGTTGATTGTCTGAGGTTTCCTGACAGTGGGAAGTTTAGAGGAATTGCTATTATTAGCTTTAAGACAGAAGCAGCAGCGAAGCGAGCCTTGGCTCTTGATGGAGCTGAAATGGGTGAACTATTTCTGAAAATCCAGCCTTACAAGGCAACTCGATCCAATAAACTGAATAAAGTATCTGATTTTGCCCCACAGATTGTGGAGGGATACAATAAAATCTATGTTGGAAATTTGTCATGGGATATTACTGAGGATGATCTGAGGAAGCTTTTCTCAGATTGCAAGATTTCATCTATACATTTTGGTAAGGATAAGGAAACAGGGGAATTTCGGGGTTATGCTCATGTAAATTTCTCTGATAGCCTCTCGGTGACTATGGCATTGAAGTTAGATCAGAAGGTTGTATGTGGAAGACCTGTCAAGATAAGCTGTGCAGTACCTCTGAAAAAAGCAGGGACTCCTTCAAACCCTGCAGCTACAACTTCAAGTACTCATTCAATATCTGTAGCTTCGGCTATGAGCACTGATTCCATTCCAGTAGATAAAACTATGGGGACAGGAGCTGGTGATGGTGGGTTTAGTGACATCAGTGGTAAGATCAAGAGGAGGACGTGCTATGAGTGTGGTGAGAAGGGTCATCTTTCTTCGGCTTGTCCAAAGTCTGTAACTACAACATTTAGTACCCATTCAATACCCGTAGCTACAACTACAAGTAGTGATCCTACACCAGCTGCTACAGCTTCAGGTACAGGAGCTGATAATAGTGGGTTGAGTGCCACCAGTGGGAAGATTAAGAGGAGGACGTGCTATGAGTGTGGTGAGAAGGGTCATCTTTCTTCAGCTTGTCCAAAGTCTGCAACTACAGCTTTTAATACCCATTCAACACCCGTAGCAAAAACCACAAGTACCGATCCAACACCAGTTGCTACAGCTACAGGAGCTGATAACGGTGGGCTGAGTGACATTAGTGGTAAGATTAAGAGGAGGACCTGCTATGAGTGTGGTGAAAAGGGTCATCTTTCTTCAGCTTGTCCAAAGGCTGCTACTACACCTTCAAGTACCCATTCAATTCGAGTAGCTACAGTTACAAGTACCGGTCCGATACCAGTAGCTACAACTACAAGCACCGCTACGACACCAGTAACTACAACTACAAGCACAGATTTGCCACCAGATGTTACAGCTGCAGGTACTGGAGCTGATCCTAGCGGGTTGTGTGCGAGCAGTGGTAAGATTAAAAGGAGGACGTGCTACGAGTGTGGTGAAAAGGGACATATTTCTTCAGCGTGTCCAAAGAAGCAAACCAATGCAAGTTAA

Protein Analysis

699

Amino Acids

74.26

Weight (kDa)

9.17

Isoelectric Point (pI)

40.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55340
fragaria_vesca FvH4_7g21531
malus_domestica MD01G1122100.v1.1 MD07G1191600.v1.1
prunus_persica Prupe.2G229600_v2.0.a1 Prupe.2G229700_v2.0.a1
pyrus_communis pycom01g14890 pycom07g18100
rosa_chinensis RchiOBHm_Chr1g0365851
rosa_laevigata RLG00000027386
rosa_multiflora Rmu_sc0023137.1_g000001 Rmu_sc0041703.1_g000001
rosa_roxburghii Rroxscaffold_4G00290800
rosa_rugosa Rorug01G0325000
rosa_samantha Rh1AG334000 Rh1BG294600 Rh1CG311300 Rh1DG327000
rosa_wichuraiana Rw1G029630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 262
Acc36I ACCTGC 2 cut(s) 1778, 1958
AccII CGCG 1 cut(s) 39
AciI CCGC 7 cut(s) 54, 288, 316, 618, 768, 1908, 1989
AclWI GGATC 5 cut(s) 328, 930, 1493, 1685, 1976
AcsI RAATTY 3 cut(s) 1009, 1106, 1129
AcuI CTGAAG 7 cut(s) 69, 170, 801, 1506, 1602, 1788, 2046
AfaI GTAC 9 cut(s) 772, 1218, 1270, 1462, 1528, 1687, 1840, 1873, 1972
AfiI CCNNNNNNNGG 2 cut(s) 809, 1563
AflIII ACRYGT 1 cut(s) 37
AgeI ACCGGT 1 cut(s) 1874
AjiI CACGTC 3 cut(s) 1392, 1584, 2028
AjnI CCWGG 1 cut(s) 648
AjuI GAANNNNNNNTTGG 6 cut(s) 263, 295, 513, 545, 854, 886
Alw21I GWGCWC 1 cut(s) 1304
Alw26I GTCTC 3 cut(s) 46, 498, 647
AlwI GGATC 5 cut(s) 328, 930, 1493, 1685, 1976
AlwNI CAGNNNCTG 4 cut(s) 1343, 1535, 1721, 1973
AoxI GGCC 1 cut(s) 31
ApeKI GCWGC 7 cut(s) 765, 854, 857, 1253, 1511, 1820, 1964
ApoI RAATTY 3 cut(s) 1009, 1106, 1129
ArsI GACNNNNNNTTYG 2 cut(s) 215, 247
AsiGI ACCGGT 1 cut(s) 1874
Asp700I GAANNNNTTC 2 cut(s) 903, 1049
AspS9I GGNCC 4 cut(s) 61, 350, 1767, 1877
AsuC2I CCSGG 1 cut(s) 262
AsuHPI GGTGA 9 cut(s) 373, 632, 908, 1162, 1358, 1418, 1610, 1796, 2054
AsuII TTCGAA 1 cut(s) 748
AsuNHI GCTAGC 1 cut(s) 172
AvaII GGWCC 4 cut(s) 61, 350, 1767, 1877
AxyI CCTNAGG 1 cut(s) 28
BbsI GAAGAC 2 cut(s) 590, 1198
Bbv12I GWGCWC 1 cut(s) 1304
BbvI GCAGC 7 cut(s) 752, 866, 869, 1265, 1498, 1807, 1951
BccI CCATC 5 cut(s) 121, 221, 494, 875, 1343
BciT130I CCWGG 1 cut(s) 650
BciVI GTATCC 1 cut(s) 980
BcnI CCSGG 1 cut(s) 262
BcoDI GTCTC 3 cut(s) 46, 498, 647
BfaI CTAG 2 cut(s) 173, 1986
BfmI CTRYAG 8 cut(s) 1251, 1284, 1515, 1641, 1707, 1713, 1860, 1965
BfuAI ACCTGC 2 cut(s) 1778, 1958
BfuI GTATCC 1 cut(s) 980
BisI GCNGC 8 cut(s) 55, 766, 855, 858, 1254, 1512, 1821, 1965
BlsI GCNGC 8 cut(s) 56, 767, 856, 859, 1255, 1513, 1822, 1966
BmcAI AGTACT 1 cut(s) 1270
Bme1390I CCNGG 2 cut(s) 262, 650
Bme18I GGWCC 4 cut(s) 61, 350, 1767, 1877
BmgBI CACGTC 3 cut(s) 1392, 1584, 2028
BmgT120I GGNCC 4 cut(s) 61, 350, 1767, 1877
BmiI GGNNCC 1 cut(s) 63
BmrFI CCNGG 2 cut(s) 262, 650
BmtI GCTAGC 1 cut(s) 176
BpiI GAAGAC 2 cut(s) 590, 1198
BpmI CTGGAG 1 cut(s) 1995
Bpu10I CCTNAGC 1 cut(s) 161
Bpu14I TTCGAA 1 cut(s) 748
BpuEI CTTGAG 2 cut(s) 529, 647
BpuMI CCSGG 1 cut(s) 262
BsaJI CCNNGG 4 cut(s) 260, 600, 735, 870
BsaWI WCCGGW 1 cut(s) 1874
Bsc4I CCNNNNNNNGG 2 cut(s) 809, 1563
Bse118I RCCGGY 1 cut(s) 1874
Bse1I ACTGG 6 cut(s) 1316, 1560, 1700, 1886, 1919, 1978
Bse21I CCTNAGG 1 cut(s) 28
BseBI CCWGG 1 cut(s) 650
BseDI CCNNGG 4 cut(s) 260, 600, 735, 870
BseGI GGATG 4 cut(s) 454, 694, 745, 1039
BseLI CCNNNNNNNGG 2 cut(s) 809, 1563
BseMII CTCAG 8 cut(s) 42, 175, 191, 785, 1020, 1031, 1068, 1727
BseNI ACTGG 6 cut(s) 1316, 1560, 1700, 1886, 1919, 1978
BseRI GAGGAG 6 cut(s) 452, 455, 458, 1399, 1591, 1777
BseXI GCAGC 7 cut(s) 752, 866, 869, 1265, 1498, 1807, 1951
BsgI GTGCAG 2 cut(s) 534, 1233
Bsh1236I CGCG 1 cut(s) 39
Bsh1285I CGRYCG 2 cut(s) 266, 735
BshFI GGCC 1 cut(s) 33
BshTI ACCGGT 1 cut(s) 1874
BsiEI CGRYCG 2 cut(s) 266, 735
BsiHKAI GWGCWC 1 cut(s) 1304
BsiSI CCGG 2 cut(s) 262, 1875
BslFI GGGAC 4 cut(s) 47, 1249, 1348, 2064
BslI CCNNNNNNNGG 2 cut(s) 809, 1563
BsmAI GTCTC 3 cut(s) 46, 498, 647
BsmBI CGTCTC 1 cut(s) 46
BsmFI GGGAC 4 cut(s) 47, 1249, 1348, 2064
BsmI GAATGC 1 cut(s) 717
BsnI GGCC 1 cut(s) 33
Bsp119I TTCGAA 1 cut(s) 748
Bsp1286I GDGCHC 1 cut(s) 1304
Bsp143I GATC 8 cut(s) 333, 935, 1036, 1171, 1377, 1498, 1690, 1981
BspACI CCGC 7 cut(s) 54, 288, 316, 618, 768, 1908, 1989
BspANI GGCC 1 cut(s) 33
BspCNI CTCAG 8 cut(s) 41, 174, 190, 786, 1021, 1032, 1067, 1728
BspFNI CGCG 1 cut(s) 39
BspLI GGNNCC 1 cut(s) 63
BspMAI CTGCAG 2 cut(s) 1255, 1969
BspMI ACCTGC 2 cut(s) 1778, 1958
BspOI GCTAGC 1 cut(s) 176
BspPI GGATC 5 cut(s) 328, 930, 1493, 1685, 1976
BspQI GCTCTTC 1 cut(s) 410
BspT104I TTCGAA 1 cut(s) 748
BsrFI RCCGGY 1 cut(s) 1874
BsrI ACTGG 6 cut(s) 1316, 1560, 1700, 1886, 1919, 1978
BssAI RCCGGY 1 cut(s) 1874
BssECI CCNNGG 4 cut(s) 260, 600, 735, 870
BssMI GATC 8 cut(s) 333, 935, 1036, 1171, 1377, 1498, 1690, 1981
BssT1I CCWWGG 1 cut(s) 870
Bst2UI CCWGG 1 cut(s) 650
Bst4CI ACNGT 3 cut(s) 809, 1730, 1864
Bst6I CTCTTC 9 cut(s) 72, 82, 88, 109, 410, 467, 473, 572, 600
BstBI TTCGAA 1 cut(s) 748
BstC8I GCNNGC 4 cut(s) 174, 678, 867, 2002
BstDEI CTNAG 8 cut(s) 28, 161, 177, 794, 1029, 1040, 1054, 1736
BstF5I GGATG 4 cut(s) 454, 694, 745, 1039
BstFNI CGCG 1 cut(s) 39
BstKTI GATC 8 cut(s) 336, 938, 1039, 1174, 1380, 1501, 1693, 1984
BstMAI GTCTC 3 cut(s) 46, 498, 647
BstMBI GATC 8 cut(s) 333, 935, 1036, 1171, 1377, 1498, 1690, 1981
BstMCI CGRYCG 2 cut(s) 266, 735
BstMWI GCNNNNNNNGC 5 cut(s) 274, 866, 1517, 1643, 1718
BstNI CCWGG 1 cut(s) 650
BstSCI CCNGG 2 cut(s) 260, 648
BstSFI CTRYAG 8 cut(s) 1251, 1284, 1515, 1641, 1707, 1713, 1860, 1965
BstUI CGCG 1 cut(s) 39
BstV1I GCAGC 7 cut(s) 752, 866, 869, 1265, 1498, 1807, 1951
BstV2I GAAGAC 2 cut(s) 590, 1198
Bsu36I CCTNAGG 1 cut(s) 28
BsuI GTATCC 1 cut(s) 980
BsuRI GGCC 1 cut(s) 33
BtrI CACGTC 3 cut(s) 1392, 1584, 2028
BtsCI GGATG 4 cut(s) 454, 694, 745, 1039
BtsI GCAGTG 2 cut(s) 382, 2011
BtsIMutI CAGTG 6 cut(s) 382, 814, 1302, 1375, 1567, 2011
BveI ACCTGC 2 cut(s) 1778, 1958
Cac8I GCNNGC 4 cut(s) 174, 678, 867, 2002
CaiI CAGNNNCTG 4 cut(s) 1343, 1535, 1721, 1973
Cfr10I RCCGGY 1 cut(s) 1874
Cfr13I GGNCC 4 cut(s) 61, 350, 1767, 1877
CpoI CGGWCCG 1 cut(s) 1877
CseI GACGC 1 cut(s) 28
Csp6I GTAC 9 cut(s) 771, 1217, 1269, 1461, 1527, 1686, 1839, 1872, 1971
CspAI ACCGGT 1 cut(s) 1874
CspI CGGWCCG 1 cut(s) 1877
CviAII CATG 2 cut(s) 1017, 1124
CviQI GTAC 9 cut(s) 771, 1217, 1269, 1461, 1527, 1686, 1839, 1872, 1971
DdeI CTNAG 8 cut(s) 28, 161, 177, 794, 1029, 1040, 1054, 1736
DpnI GATC 8 cut(s) 335, 937, 1038, 1173, 1379, 1500, 1692, 1983
DpnII GATC 8 cut(s) 333, 935, 1036, 1171, 1377, 1498, 1690, 1981
DrdI GACNNNNNNGTC 1 cut(s) 262
DseDI GACNNNNNNGTC 1 cut(s) 262
Eam1104I CTCTTC 9 cut(s) 72, 82, 88, 109, 410, 467, 473, 572, 600
EarI CTCTTC 9 cut(s) 72, 82, 88, 109, 410, 467, 473, 572, 600
Eco130I CCWWGG 1 cut(s) 870
Eco47I GGWCC 4 cut(s) 61, 350, 1767, 1877
Eco57I CTGAAG 7 cut(s) 69, 170, 801, 1506, 1602, 1788, 2046
Eco81I CCTNAGG 1 cut(s) 28
EcoO109I RGGNCCY 1 cut(s) 1767
EcoRII CCWGG 1 cut(s) 648
EcoT14I CCWWGG 1 cut(s) 870
ErhI CCWWGG 1 cut(s) 870
Esp3I CGTCTC 1 cut(s) 46
FaeI CATG 2 cut(s) 1020, 1127
FalI AAGNNNNNCTT 2 cut(s) 854, 886
FaqI GGGAC 4 cut(s) 47, 1249, 1348, 2064
FatI CATG 2 cut(s) 1016, 1123
FauI CCCGC 2 cut(s) 309, 1982
Fnu4HI GCNGC 8 cut(s) 55, 766, 855, 858, 1254, 1512, 1821, 1965
FokI GGATG 4 cut(s) 461, 701, 752, 1046
Fsp4HI GCNGC 8 cut(s) 55, 766, 855, 858, 1254, 1512, 1821, 1965
FspBI CTAG 2 cut(s) 173, 1986
GluI GCNGC 8 cut(s) 55, 766, 855, 858, 1254, 1512, 1821, 1965
GsuI CTGGAG 1 cut(s) 1995
HaeIII GGCC 1 cut(s) 33
HapII CCGG 2 cut(s) 262, 1875
HgaI GACGC 1 cut(s) 28
Hin1II CATG 2 cut(s) 1020, 1127
HindIII AAGCTT 1 cut(s) 1046
HinfI GANTC 4 cut(s) 191, 284, 1237, 1307
HpaII CCGG 2 cut(s) 262, 1875
HphI GGTGA 9 cut(s) 373, 632, 908, 1162, 1358, 1418, 1610, 1796, 2054
Hpy166II GTNNAC 1 cut(s) 899
Hpy188III TCNNGA 5 cut(s) 353, 803, 878, 1201, 1381
Hpy8I GTNNAC 1 cut(s) 899
HpyAV CCTTC 6 cut(s) 532, 1171, 1251, 1405, 1597, 1842
HpyCH4III ACNGT 3 cut(s) 809, 1730, 1864
HpyCH4IV ACGT 3 cut(s) 1391, 1583, 2027
HpyCH4V TGCA 8 cut(s) 122, 515, 1062, 1214, 1253, 1637, 1967, 2090
HpyF10VI GCNNNNNNNGC 5 cut(s) 274, 866, 1517, 1643, 1718
HpyF3I CTNAG 8 cut(s) 28, 161, 177, 794, 1029, 1040, 1054, 1736
HpySE526I ACGT 3 cut(s) 1391, 1583, 2027
Hsp92II CATG 2 cut(s) 1020, 1127
Kzo9I GATC 8 cut(s) 333, 935, 1036, 1171, 1377, 1498, 1690, 1981
LguI GCTCTTC 1 cut(s) 410
LmnI GCTCC 5 cut(s) 884, 1340, 1532, 1718, 1976
Lsp1109I GCAGC 7 cut(s) 752, 866, 869, 1265, 1498, 1807, 1951
MaeI CTAG 2 cut(s) 173, 1986
MaeII ACGT 3 cut(s) 1391, 1583, 2027
MaeIII GTNAC 9 cut(s) 14, 752, 1150, 1361, 1444, 1739, 1864, 1921, 1957
MalI GATC 8 cut(s) 335, 937, 1038, 1173, 1379, 1500, 1692, 1983
MboI GATC 8 cut(s) 333, 935, 1036, 1171, 1377, 1498, 1690, 1981
MhlI GDGCHC 1 cut(s) 1304
MluCI AATT 7 cut(s) 385, 642, 825, 1009, 1106, 1129, 1848
MluI ACGCGT 1 cut(s) 37
MlyI GAGTC 2 cut(s) 278, 1231
MmeI TCCRAC 3 cut(s) 213, 985, 1718
MroXI GAANNNNTTC 2 cut(s) 903, 1049
MseI TTAA 6 cut(s) 843, 1572, 1650, 1758, 2016, 2095
MspA1I CMGCKG 2 cut(s) 1511, 1964
MspI CCGG 2 cut(s) 262, 1875
MspR9I CCNGG 2 cut(s) 262, 650
Mva1269I GAATGC 1 cut(s) 717
MvaI CCWGG 1 cut(s) 650
MvnI CGCG 1 cut(s) 39
MwoI GCNNNNNNNGC 5 cut(s) 274, 866, 1517, 1643, 1718
NciI CCSGG 1 cut(s) 262
NdeII GATC 8 cut(s) 333, 935, 1036, 1171, 1377, 1498, 1690, 1981
NheI GCTAGC 1 cut(s) 172
NlaIII CATG 2 cut(s) 1020, 1127
NlaIV GGNNCC 1 cut(s) 63
NmeAIII GCCGAG 1 cut(s) 23
NmuCI GTSAC 3 cut(s) 1150, 1361, 1739
NspV TTCGAA 1 cut(s) 748
PciSI GCTCTTC 1 cut(s) 410
PctI GAATGC 1 cut(s) 717
PdmI GAANNNNTTC 2 cut(s) 903, 1049
PfeI GAWTC 2 cut(s) 191, 1307
PfoI TCCNGGA 1 cut(s) 648
PinAI ACCGGT 1 cut(s) 1874
PkrI GCNGC 8 cut(s) 56, 767, 856, 859, 1255, 1513, 1822, 1966
PleI GAGTC 2 cut(s) 278, 1231
PpsI GAGTC 2 cut(s) 278, 1231
PpuMI RGGWCCY 1 cut(s) 1767
Psp5II RGGWCCY 1 cut(s) 1767
Psp6I CCWGG 1 cut(s) 648
PspGI CCWGG 1 cut(s) 648
PspN4I GGNNCC 1 cut(s) 63
PspPI GGNCC 4 cut(s) 61, 350, 1767, 1877
PspPPI RGGWCCY 1 cut(s) 1767
PstI CTGCAG 2 cut(s) 1255, 1969
PstNI CAGNNNCTG 4 cut(s) 1343, 1535, 1721, 1973
PvuII CAGCTG 2 cut(s) 1511, 1964
RsaI GTAC 9 cut(s) 772, 1218, 1270, 1462, 1528, 1687, 1840, 1873, 1972
RsaNI GTAC 9 cut(s) 771, 1217, 1269, 1461, 1527, 1686, 1839, 1872, 1971
Rsr2I CGGWCCG 1 cut(s) 1877
RsrII CGGWCCG 1 cut(s) 1877
SapI GCTCTTC 1 cut(s) 410
SaqAI TTAA 6 cut(s) 843, 1572, 1650, 1758, 2016, 2095
SatI GCNGC 8 cut(s) 55, 766, 855, 858, 1254, 1512, 1821, 1965
Sau3AI GATC 8 cut(s) 333, 935, 1036, 1171, 1377, 1498, 1690, 1981
Sau96I GGNCC 4 cut(s) 61, 350, 1767, 1877
ScaI AGTACT 1 cut(s) 1270
SchI GAGTC 2 cut(s) 278, 1231
ScrFI CCNGG 2 cut(s) 262, 650
SduI GDGCHC 1 cut(s) 1304
SfcI CTRYAG 8 cut(s) 1251, 1284, 1515, 1641, 1707, 1713, 1860, 1965
SfuI TTCGAA 1 cut(s) 748
SinI GGWCC 4 cut(s) 61, 350, 1767, 1877
SmlI CTYRAG 2 cut(s) 508, 626
SmoI CTYRAG 2 cut(s) 508, 626
Sse9I AATT 7 cut(s) 385, 642, 825, 1009, 1106, 1129, 1848
SsiI CCGC 7 cut(s) 54, 288, 316, 618, 768, 1908, 1989
SspMI CTAG 2 cut(s) 173, 1986
StyD4I CCNGG 2 cut(s) 260, 648
StyI CCWWGG 1 cut(s) 870
TaaI ACNGT 3 cut(s) 809, 1730, 1864
TaiI ACGT 3 cut(s) 1394, 1586, 2030
TaqI TCGA 6 cut(s) 182, 254, 731, 748, 934, 1852
TaqII GACCGA 1 cut(s) 749
TasI AATT 7 cut(s) 385, 642, 825, 1009, 1106, 1129, 1848
TatI WGTACW 1 cut(s) 1268
TauI GCSGC 1 cut(s) 57
TfiI GAWTC 2 cut(s) 191, 1307
Tru1I TTAA 6 cut(s) 843, 1572, 1650, 1758, 2016, 2095
Tru9I TTAA 6 cut(s) 843, 1572, 1650, 1758, 2016, 2095
TscAI CASTG 6 cut(s) 382, 814, 1309, 1375, 1567, 2011
TseFI GTSAC 3 cut(s) 1150, 1361, 1739
TseI GCWGC 7 cut(s) 765, 854, 857, 1253, 1511, 1820, 1964
Tsp45I GTSAC 3 cut(s) 1150, 1361, 1739
TspDTI ATGAA 1 cut(s) 1059
TspGWI ACGGA 2 cut(s) 340, 602
TspRI CASTG 6 cut(s) 382, 814, 1309, 1375, 1567, 2011
VpaK11BI GGWCC 4 cut(s) 61, 350, 1767, 1877
XapI RAATTY 3 cut(s) 1009, 1106, 1129
XmnI GAANNNNTTC 2 cut(s) 903, 1049
XspI CTAG 2 cut(s) 173, 1986
ZrmI AGTACT 1 cut(s) 1270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.