RLG00000027386

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0012338
Physical Location & Seq
Reverse (-)
11132621 .. 11135794
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027386

Sequence Viewer

Length: 2118 bp
ATGGTTTTATCAAACCGAAAGCTGAAGCAACAGCTCAGGGAGAAGATAGCCGATTCTTTATTGACATTCGAAATTGTTAAGTCCGACCCGAGCAATGACGGGTCTGCAAACCCTGACCCGAATCCGCAGCAGCCCCAATCGCTGAGAGCGCTTCTGGGTTCGGCGACCCCGAAACCCAGCTTGTCAAAGCGAGCCAAAAGGAGAAAGATCGCCGCTTTGAGAGGTCCGGCGGCGAGTGGCAGCGGCGGTAATTTTGAGGAAAACGAGGGGGAGGAAATTAGGTCAGAGGAATTGGGGGTTGAGAAGGAAAAGAGTGGAGCTTTGGGTTCGGAGGGAAATGGGGATTTGAAGAAGGAAATTGGGTCGGAGAGTTTGGGGAAGAAGAAGAAGATGAAGAAGAAGGAAAAGAGTGGACATTTGGGTGCAGAGGGAATCGGGGATTTGGAGGAAGAGAAAAGTGAGATTGGGTCAGAGAGTTCGGGGAAGAAGAAGAGGAAGAGAGATGAGGAAGAAAAGAGTGGAGATTTGAGTTCAGAGGAAAATGGGGGTGTGAAGGAGGCTAAGAAACCAAAGAAGAAGAAGCCCAAGTGGAAGAAGAAGAAGGAGGCAAAGAGTGAGGAAGAGAAGGGTTTTGAGGTTGTGAGGGAAGACAAGAAGGGTTTTGAGGTTGTGAGGGAAGACAAGAAGGGTTTTGAGGTTGTGAGGGAAGAGCAAAGTGTCAATGAGACTACTATGGAAACTGAAAGGCAAGCAAATGGGGAAGTTGCAACAAAAGTTTATGTTGGAGGGATTCCTTATTACTCGACGGAGGATGATATTCGAAGTTACTTTGAAAACTGTGGCTCCATTACTGAGATTGATTGTATGAAGTTTCCTGACAGTGGGAAGTTCAAAGGAATTGCCATTATTAGCTTTAGGACGGAAGCTGCTGCTAAACGAGCATTGGCTCTTGATGGAGCTGACATGGGTGGACTGTTTCTGAAAATCCAGCCTTACAAAACAACTCGGGTCAATAAAGTAGTCAATAACGTGTCTGATTTTGCCCCAAAAATTGTGGAGGGCTACAATAGAATCTACGTTGGAAATTTGTCTTGGGATATCACTGAGGACGAACTGAGGAAACTTTTCTCAGATTGCAAGATATCATCTATCAATTTTGGCATGGATAAGGAAACAGGAGAATTCCGAGGCTATGCCCATGTGGAATTTTCCGACAGTCTCTCACTGACAATGGCATTGAAGTTGGATCAGAAGATTGTTCTAGGGAGACCTGTCAAGATAAGCTGTGCAGTTCCTCTAAGAAAACCAGGGATCCATCCCAAGTCTGTATCCTCAACTACAGGTACCCTTTCGGAGGCTGTAGCTACTACTGCAAGTGCAGGAGCTGATAATGCCGGGTTGAGTGCCATCAGTGGTAAGCTTAAGAGAAGGACCTGCTATGAGTGTGGTGAAAAGGGCCATGTTTCTTCACTTTGTCCAATGAAGCAACCTGTGAATGTAATAGATACTAATGCATCCTATACAAAGCCTGTAACGAGTGCAAGTATGCTTTTGGAGTCTGTAACAAGAAGTACAGAAGCTGCTAATACTGAGTTGAGCTCTGTCAGTGGTAAGATCAAGAGAAGGACGTGCTATGAGTGTGGTGAAAAGGGCCATGTTTCTACAGCTTGTCCAAAGAAGCAATCTGCTGGTGCAATAATAGATACCAATGCCACCCCTACGATGCCTGTACATACAATTACAAGTCCTGTATGGGAGTCCGTAGCTATAACTCCAAGGACAGGAGTTGATAATACTGGGTTGAGTTCCATCAGCGGTAAGATTAAGAGAAGAACATGTTACGAATGTGGGGAAAAAGGTCATGTTTCTACAGCTTGTCCAAACAAACAATATGCTCAGCCAATAGAAACCACTGCAAGTCATATGAAGCCTGTACCTACAACGCCAACACCCCTTCTGGAGTCTGCAGCTACAACTGCAAGTACAGAACCTGATAATGCTGGGTTGAGCTCCATTAGCGGTAAGATTAAGAGAAGGACGTGCTATGAGTGTGGTGAAAAGGGCCATATATCTTCAGCTTGTCCAAAGAAACAATCTGTCGATAACAATGCAAGCTGA

Protein Analysis

706

Amino Acids

76.29

Weight (kDa)

8.98

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 259 - 326 2.9e-13 RNA recognition motif
RRM_1 PF00076 358 - 425 1.5e-12 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55340
fragaria_vesca FvH4_7g21531
malus_domestica MD01G1122100.v1.1 MD07G1191600.v1.1
prunus_persica Prupe.2G229600_v2.0.a1 Prupe.2G229700_v2.0.a1
pyrus_communis pycom01g14890 pycom07g18100
rosa_chinensis RchiOBHm_Chr1g0365851
rosa_laevigata RLG00000027386
rosa_multiflora Rmu_sc0023137.1_g000001 Rmu_sc0041703.1_g000001
rosa_roxburghii Rroxscaffold_4G00290800
rosa_rugosa Rorug01G0325000
rosa_samantha Rh1AG334000 Rh1BG294600 Rh1CG311300 Rh1DG327000
rosa_wichuraiana Rw1G029630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1442
Acc65I GGTACC 1 cut(s) 1343
AccB1I GGYRCC 1 cut(s) 1343
AciI CCGC 7 cut(s) 125, 213, 230, 243, 246, 1815, 2019
AclWI GGATC 3 cut(s) 1254, 1306, 1319
AcsI RAATTY 3 cut(s) 1084, 1181, 1205
AcuI CTGAAG 2 cut(s) 44, 2058
AfaI GTAC 5 cut(s) 1345, 1573, 1731, 1935, 1984
AfeI AGCGCT 1 cut(s) 150
AfiI CCNNNNNNNGG 3 cut(s) 881, 1354, 1781
AflII CTTAAG 1 cut(s) 1421
AflIII ACRYGT 2 cut(s) 1029, 1835
AgsI TTSAA 4 cut(s) 349, 833, 892, 1240
AjiI CACGTC 2 cut(s) 1629, 2040
AjnI CCWGG 1 cut(s) 1306
AjuI GAANNNNNNNTTGG 2 cut(s) 1075, 1107
Alw21I GWGCWC 2 cut(s) 1601, 2012
Alw26I GTCTC 3 cut(s) 719, 1223, 1261
AlwI GGATC 3 cut(s) 1254, 1306, 1319
AlwNI CAGNNNCTG 3 cut(s) 1385, 1580, 1991
Ama87I CYCGRG 2 cut(s) 88, 1005
Aor51HI AGCGCT 1 cut(s) 150
AoxI GGCC 3 cut(s) 1456, 1651, 2062
ApeKI GCWGC 7 cut(s) 127, 130, 240, 926, 929, 1580, 1967
ApoI RAATTY 3 cut(s) 1084, 1181, 1205
Asp700I GAANNNNTTC 1 cut(s) 1124
Asp718I GGTACC 1 cut(s) 1343
AspLEI GCGC 1 cut(s) 151
AspS9I GGNCC 5 cut(s) 224, 1431, 1456, 1651, 2062
AsuC2I CCSGG 1 cut(s) 1396
AsuHPI GGTGA 3 cut(s) 1460, 1655, 2066
AsuII TTCGAA 2 cut(s) 69, 820
AvaI CYCGRG 2 cut(s) 88, 1005
AvaII GGWCC 2 cut(s) 224, 1431
BamHI GGATCC 1 cut(s) 1311
BanI GGYRCC 1 cut(s) 1343
BanII GRGCYC 2 cut(s) 1601, 2012
BbsI GAAGAC 2 cut(s) 654, 684
Bbv12I GWGCWC 2 cut(s) 1601, 2012
BbvI GCAGC 7 cut(s) 139, 142, 252, 913, 916, 1567, 1979
BccI CCATC 4 cut(s) 947, 1323, 1415, 1817
BcgI CGANNNNNNTGC 1 cut(s) 2090
BciT130I CCWGG 1 cut(s) 1308
BciVI GTATCC 1 cut(s) 1339
BcnI CCSGG 1 cut(s) 1396
BcoDI GTCTC 3 cut(s) 719, 1223, 1261
BfaI CTAG 1 cut(s) 1262
BfmI CTRYAG 5 cut(s) 1338, 1359, 1662, 1869, 1965
BfoI RGCGCY 1 cut(s) 152
BfrI CTTAAG 1 cut(s) 1421
BfuAI ACCTGC 1 cut(s) 1442
BfuI GTATCC 1 cut(s) 1339
BlpI GCTNAGC 1 cut(s) 1896
Bme1390I CCNGG 2 cut(s) 1308, 1396
Bme18I GGWCC 2 cut(s) 224, 1431
BmeT110I CYCGRG 2 cut(s) 88, 1005
BmgBI CACGTC 2 cut(s) 1629, 2040
BmgT120I GGNCC 5 cut(s) 224, 1431, 1456, 1651, 2062
BmiI GGNNCC 3 cut(s) 844, 1313, 1345
BmrFI CCNGG 2 cut(s) 1308, 1396
BmrI ACTGGG 1 cut(s) 1806
BmsI GCATC 2 cut(s) 1523, 1713
BmuI ACTGGG 1 cut(s) 1806
BpiI GAAGAC 2 cut(s) 654, 684
BplI GAGNNNNNCTC 2 cut(s) 1583, 1615
BpmI CTGGAG 1 cut(s) 1979
Bpu10I CCTNAGC 1 cut(s) 35
Bpu1102I GCTNAGC 1 cut(s) 1896
Bpu14I TTCGAA 2 cut(s) 69, 820
BpuMI CCSGG 1 cut(s) 1396
BsaI GGTCTC 1 cut(s) 1261
BsaJI CCNNGG 3 cut(s) 1186, 1307, 1775
BsaXI ACNNNNNCTCC 2 cut(s) 827, 857
Bsc4I CCNNNNNNNGG 3 cut(s) 881, 1354, 1781
Bse1I ACTGG 1 cut(s) 1801
Bse3DI GCAATG 1 cut(s) 100
BseBI CCWGG 1 cut(s) 1308
BseDI CCNNGG 3 cut(s) 1186, 1307, 1775
BseGI GGATG 3 cut(s) 817, 1315, 1514
BseLI CCNNNNNNNGG 3 cut(s) 881, 1354, 1781
BseMI GCAATG 1 cut(s) 100
BseMII CTCAG 8 cut(s) 49, 134, 843, 1095, 1106, 1143, 1581, 1910
BseNI ACTGG 1 cut(s) 1801
BseXI GCAGC 7 cut(s) 139, 142, 252, 913, 916, 1567, 1979
BseYI CCCAGC 2 cut(s) 176, 2000
BsgI GTGCAG 3 cut(s) 444, 1308, 1398
BshFI GGCC 3 cut(s) 1458, 1653, 2064
BshNI GGYRCC 1 cut(s) 1343
BsiHKAI GWGCWC 2 cut(s) 1601, 2012
BsiHKCI CYCGRG 2 cut(s) 88, 1005
BsiSI CCGG 2 cut(s) 227, 1395
BslI CCNNNNNNNGG 3 cut(s) 881, 1354, 1781
BsmAI GTCTC 3 cut(s) 719, 1223, 1261
BsnI GGCC 3 cut(s) 1458, 1653, 2064
Bso31I GGTCTC 1 cut(s) 1261
BsoBI CYCGRG 2 cut(s) 88, 1005
Bsp119I TTCGAA 2 cut(s) 69, 820
Bsp1286I GDGCHC 2 cut(s) 1601, 2012
Bsp1407I TGTACA 1 cut(s) 1729
Bsp143I GATC 4 cut(s) 207, 1246, 1311, 1614
Bsp1720I GCTNAGC 1 cut(s) 1896
BspACI CCGC 7 cut(s) 125, 213, 230, 243, 246, 1815, 2019
BspANI GGCC 3 cut(s) 1458, 1653, 2064
BspCNI CTCAG 8 cut(s) 48, 135, 844, 1096, 1107, 1142, 1582, 1909
BspLI GGNNCC 3 cut(s) 844, 1313, 1345
BspMAI CTGCAG 1 cut(s) 1969
BspMI ACCTGC 1 cut(s) 1442
BspPI GGATC 3 cut(s) 1254, 1306, 1319
BspQI GCTCTTC 1 cut(s) 702
BspT104I TTCGAA 2 cut(s) 69, 820
BspT107I GGYRCC 1 cut(s) 1343
BspTI CTTAAG 1 cut(s) 1421
BspTNI GGTCTC 1 cut(s) 1261
BsrDI GCAATG 1 cut(s) 100
BsrGI TGTACA 1 cut(s) 1729
BsrI ACTGG 1 cut(s) 1801
BssECI CCNNGG 3 cut(s) 1186, 1307, 1775
BssMI GATC 4 cut(s) 207, 1246, 1311, 1614
BssT1I CCWWGG 1 cut(s) 1775
Bst2UI CCWGG 1 cut(s) 1308
Bst4CI ACNGT 4 cut(s) 839, 881, 975, 1217
Bst6I CTCTTC 5 cut(s) 444, 485, 491, 615, 702
BstAFI CTTAAG 1 cut(s) 1421
BstAUI TGTACA 1 cut(s) 1729
BstBI TTCGAA 2 cut(s) 69, 820
BstC8I GCNNGC 3 cut(s) 192, 750, 2113
BstENI CCTNNNNNAGG 1 cut(s) 1352
BstF5I GGATG 3 cut(s) 817, 1315, 1514
BstH2I RGCGCY 1 cut(s) 152
BstHHI GCGC 1 cut(s) 151
BstKTI GATC 4 cut(s) 210, 1249, 1314, 1617
BstMAI GTCTC 3 cut(s) 719, 1223, 1261
BstMBI GATC 4 cut(s) 207, 1246, 1311, 1614
BstMWI GCNNNNNNNGC 7 cut(s) 139, 148, 938, 1370, 1391, 1976, 2016
BstNI CCWGG 1 cut(s) 1308
BstNSI RCATGY 1 cut(s) 1839
BstSCI CCNGG 2 cut(s) 1306, 1394
BstSFI CTRYAG 5 cut(s) 1338, 1359, 1662, 1869, 1965
BstV1I GCAGC 7 cut(s) 139, 142, 252, 913, 916, 1567, 1979
BstV2I GAAGAC 2 cut(s) 654, 684
BstX2I RGATCY 1 cut(s) 1311
BstYI RGATCY 1 cut(s) 1311
BsuI GTATCC 1 cut(s) 1339
BsuRI GGCC 3 cut(s) 1458, 1653, 2064
BtrI CACGTC 2 cut(s) 1629, 2040
BtsCI GGATG 3 cut(s) 817, 1315, 1514
BtsI GCAGTG 1 cut(s) 1911
BtsIMutI CAGTG 6 cut(s) 886, 1101, 1223, 1417, 1612, 1911
BveI ACCTGC 1 cut(s) 1442
Cac8I GCNNGC 3 cut(s) 192, 750, 2113
CaiI CAGNNNCTG 3 cut(s) 1385, 1580, 1991
CfoI GCGC 1 cut(s) 151
Cfr13I GGNCC 5 cut(s) 224, 1431, 1456, 1651, 2062
Csp6I GTAC 5 cut(s) 1344, 1572, 1730, 1934, 1983
CspCI CAANNNNNGTGG 2 cut(s) 1035, 1070
CviAII CATG 7 cut(s) 964, 1162, 1199, 1460, 1655, 1836, 1862
CviQI GTAC 5 cut(s) 1344, 1572, 1730, 1934, 1983
DpnI GATC 4 cut(s) 209, 1248, 1313, 1616
DpnII GATC 4 cut(s) 207, 1246, 1311, 1614
Eam1104I CTCTTC 5 cut(s) 444, 485, 491, 615, 702
EarI CTCTTC 5 cut(s) 444, 485, 491, 615, 702
Ecl136II GAGCTC 2 cut(s) 1599, 2010
Eco130I CCWWGG 1 cut(s) 1775
Eco24I GRGCYC 2 cut(s) 1601, 2012
Eco31I GGTCTC 1 cut(s) 1261
Eco32I GATATC 2 cut(s) 1099, 1143
Eco47I GGWCC 2 cut(s) 224, 1431
Eco47III AGCGCT 1 cut(s) 150
Eco53kI GAGCTC 2 cut(s) 1599, 2010
Eco57I CTGAAG 2 cut(s) 44, 2058
Eco88I CYCGRG 2 cut(s) 88, 1005
EcoICRI GAGCTC 2 cut(s) 1599, 2010
EcoNI CCTNNNNNAGG 1 cut(s) 1352
EcoO109I RGGNCCY 1 cut(s) 1431
EcoRI GAATTC 1 cut(s) 1181
EcoRII CCWGG 1 cut(s) 1306
EcoRV GATATC 2 cut(s) 1099, 1143
EcoT14I CCWWGG 1 cut(s) 1775
EcoT22I ATGCAT 1 cut(s) 1516
EcoT38I GRGCYC 2 cut(s) 1601, 2012
ErhI CCWWGG 1 cut(s) 1775
FaeI CATG 7 cut(s) 967, 1165, 1202, 1463, 1658, 1839, 1865
FatI CATG 7 cut(s) 963, 1161, 1198, 1459, 1654, 1835, 1861
FauNDI CATATG 1 cut(s) 1923
FokI GGATG 3 cut(s) 824, 1302, 1501
FriOI GRGCYC 2 cut(s) 1601, 2012
FspBI CTAG 1 cut(s) 1262
GlaI GCGC 1 cut(s) 150
GsaI CCCAGC 2 cut(s) 180, 2004
GsuI CTGGAG 1 cut(s) 1979
HaeII RGCGCY 1 cut(s) 152
HaeIII GGCC 3 cut(s) 1458, 1653, 2064
HapII CCGG 2 cut(s) 227, 1395
HhaI GCGC 1 cut(s) 151
Hin1II CATG 7 cut(s) 967, 1165, 1202, 1463, 1658, 1839, 1865
Hin6I GCGC 1 cut(s) 149
HinP1I GCGC 1 cut(s) 149
HindIII AAGCTT 1 cut(s) 1418
HinfI GANTC 8 cut(s) 53, 121, 432, 790, 1071, 1556, 1757, 1961
HpaII CCGG 2 cut(s) 227, 1395
HphI GGTGA 3 cut(s) 1460, 1655, 2066
Hpy166II GTNNAC 2 cut(s) 413, 971
Hpy188III TCNNGA 5 cut(s) 875, 950, 1276, 1618, 1958
Hpy8I GTNNAC 2 cut(s) 413, 971
Hpy99I CGWCG 1 cut(s) 808
HpyCH4III ACNGT 4 cut(s) 839, 881, 975, 1217
HpyCH4IV ACGT 4 cut(s) 1029, 1077, 1628, 2039
HpyF10VI GCNNNNNNNGC 7 cut(s) 139, 148, 938, 1370, 1391, 1976, 2016
HpySE526I ACGT 4 cut(s) 1029, 1077, 1628, 2039
Hsp92II CATG 7 cut(s) 967, 1165, 1202, 1463, 1658, 1839, 1865
HspAI GCGC 1 cut(s) 149
KpnI GGTACC 1 cut(s) 1347
Kzo9I GATC 4 cut(s) 207, 1246, 1311, 1614
LguI GCTCTTC 1 cut(s) 702
LmnI GCTCC 5 cut(s) 317, 848, 956, 1382, 2015
Lsp1109I GCAGC 7 cut(s) 139, 142, 252, 913, 916, 1567, 1979
LweI GCATC 2 cut(s) 1523, 1713
MaeI CTAG 1 cut(s) 1262
MaeII ACGT 4 cut(s) 1029, 1077, 1628, 2039
MaeIII GTNAC 4 cut(s) 824, 1531, 1561, 1838
MalI GATC 4 cut(s) 209, 1248, 1313, 1616
MboI GATC 4 cut(s) 207, 1246, 1311, 1614
MflI RGATCY 1 cut(s) 1311
MhlI GDGCHC 2 cut(s) 1601, 2012
MlyI GAGTC 3 cut(s) 1565, 1766, 1970
MmeI TCCRAC 6 cut(s) 108, 345, 763, 1060, 1224, 1236
Mph1103I ATGCAT 1 cut(s) 1516
MroXI GAANNNNTTC 1 cut(s) 1124
MseI TTAA 4 cut(s) 78, 1422, 1824, 2028
MslI CAYNNNNRTG 1 cut(s) 420
MspA1I CMGCKG 2 cut(s) 243, 1815
MspCI CTTAAG 1 cut(s) 1421
MspI CCGG 2 cut(s) 227, 1395
MspR9I CCNGG 2 cut(s) 1308, 1396
MvaI CCWGG 1 cut(s) 1308
MwoI GCNNNNNNNGC 7 cut(s) 139, 148, 938, 1370, 1391, 1976, 2016
NciI CCSGG 1 cut(s) 1396
NdeI CATATG 1 cut(s) 1923
NdeII GATC 4 cut(s) 207, 1246, 1311, 1614
NlaIII CATG 7 cut(s) 967, 1165, 1202, 1463, 1658, 1839, 1865
NlaIV GGNNCC 3 cut(s) 844, 1313, 1345
NsiI ATGCAT 1 cut(s) 1516
NspI RCATGY 1 cut(s) 1839
NspV TTCGAA 2 cut(s) 69, 820
PciI ACATGT 1 cut(s) 1835
PciSI GCTCTTC 1 cut(s) 702
PcsI WCGNNNNNNNCGW 1 cut(s) 167
PdmI GAANNNNTTC 1 cut(s) 1124
PfeI GAWTC 5 cut(s) 53, 121, 432, 790, 1071
PleI GAGTC 3 cut(s) 1564, 1765, 1969
PpsI GAGTC 3 cut(s) 1564, 1765, 1969
PpuMI RGGWCCY 1 cut(s) 1431
PscI ACATGT 1 cut(s) 1835
Psp124BI GAGCTC 2 cut(s) 1601, 2012
Psp5II RGGWCCY 1 cut(s) 1431
Psp6I CCWGG 1 cut(s) 1306
PspFI CCCAGC 2 cut(s) 176, 2000
PspGI CCWGG 1 cut(s) 1306
PspN4I GGNNCC 3 cut(s) 844, 1313, 1345
PspPI GGNCC 5 cut(s) 224, 1431, 1456, 1651, 2062
PspPPI RGGWCCY 1 cut(s) 1431
PstI CTGCAG 1 cut(s) 1969
PstNI CAGNNNCTG 3 cut(s) 1385, 1580, 1991
PsuI RGATCY 1 cut(s) 1311
RsaI GTAC 5 cut(s) 1345, 1573, 1731, 1935, 1984
RsaNI GTAC 5 cut(s) 1344, 1572, 1730, 1934, 1983
RseI CAYNNNNRTG 1 cut(s) 420
SacI GAGCTC 2 cut(s) 1601, 2012
SapI GCTCTTC 1 cut(s) 702
SaqAI TTAA 4 cut(s) 78, 1422, 1824, 2028
Sau3AI GATC 4 cut(s) 207, 1246, 1311, 1614
Sau96I GGNCC 5 cut(s) 224, 1431, 1456, 1651, 2062
SchI GAGTC 3 cut(s) 1565, 1766, 1970
ScrFI CCNGG 2 cut(s) 1308, 1396
SduI GDGCHC 2 cut(s) 1601, 2012
SfaNI GCATC 2 cut(s) 1523, 1713
SfcI CTRYAG 5 cut(s) 1338, 1359, 1662, 1869, 1965
SfuI TTCGAA 2 cut(s) 69, 820
SinI GGWCC 2 cut(s) 224, 1431
SmiMI CAYNNNNRTG 1 cut(s) 420
SmlI CTYRAG 1 cut(s) 1421
SmoI CTYRAG 1 cut(s) 1421
SsiI CCGC 7 cut(s) 125, 213, 230, 243, 246, 1815, 2019
SspMI CTAG 1 cut(s) 1262
SstI GAGCTC 2 cut(s) 1601, 2012
StyD4I CCNGG 2 cut(s) 1306, 1394
StyI CCWWGG 1 cut(s) 1775
TaaI ACNGT 4 cut(s) 839, 881, 975, 1217
TaiI ACGT 4 cut(s) 1032, 1080, 1631, 2042
TaqI TCGA 4 cut(s) 69, 803, 820, 2100
TatI WGTACW 3 cut(s) 1571, 1729, 1982
TauI GCSGC 3 cut(s) 215, 233, 246
TfiI GAWTC 5 cut(s) 53, 121, 432, 790, 1071
Tru1I TTAA 4 cut(s) 78, 1422, 1824, 2028
Tru9I TTAA 4 cut(s) 78, 1422, 1824, 2028
TscAI CASTG 6 cut(s) 886, 1108, 1230, 1417, 1612, 1918
TseI GCWGC 7 cut(s) 127, 130, 240, 926, 929, 1580, 1967
TspDTI ATGAA 4 cut(s) 407, 881, 1496, 1940
TspGWI ACGGA 3 cut(s) 821, 935, 1750
TspRI CASTG 6 cut(s) 886, 1108, 1230, 1417, 1612, 1918
Vha464I CTTAAG 1 cut(s) 1421
VpaK11BI GGWCC 2 cut(s) 224, 1431
XagI CCTNNNNNAGG 1 cut(s) 1352
XapI RAATTY 3 cut(s) 1084, 1181, 1205
XceI RCATGY 1 cut(s) 1839
XmnI GAANNNNTTC 1 cut(s) 1124
XspI CTAG 1 cut(s) 1262
Zsp2I ATGCAT 1 cut(s) 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.