Rroxscaffold_4G00290800

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0012338
Physical Location & Seq
Reverse (-)
11297243 .. 11300954
3712 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00290800.1

Sequence Viewer

Length: 2106 bp
ATGGTTTTATCAAACCGAAAGCTGAAGCAGCAGCTTAGGGAGAAGATAGCCGATTCTTTATTGACATTCGAAATCGTCAAGTCCGACCCGAGCAATGACGGGTCTGCAAACCCTGACCCGAATTCGCAGCCCCAATCGCTGAGAGCGCTTCTGGGTTCGGCAACCCCAAAGCCCAGCTTGTCGAAGCGAGCGAAAAGGAGAAAGATCGCCGCTTTGAGAGGTCCGGCGGCGAGTGGCAGCGGCGGTAATTTTGGGGAAAACGAGGGGGAGGAAATTAGGGCAGAGGAATTGGGGGTTGAGAAGGAAAAGAGTGGAGCTTTGGGTTCGGCGGGAAATGGGGATTTGAAGAAGGACATTGGGTCCGAGAGTTTGGGGAAGAAGAAGAAGAAGAAGAACGAAAAGAGTGGAGATTTGGGTGCAGAGGGAAATGGGGATTTGGAGGAAGAGAAAAGTGAAATTGGGTCAGAGAGTTTGGGGAAGAAGAAGAAGGAGAAGAAGAGGAAGAGAGATGAGGAAGAAAAGAGTGGAGATTTGAGTTCAGAGGAAAATGGGGGTGTGAAGGAGGCTAAGAAACCAAAGAAGAAGAAGCCCAAGTGGAAGAAGAAGAAGGAGGCAAAGAGTGAGGAAGAGAAGGGTTTTGAGGTTGTGAGGGAAGAGCAGAAGGGGTTTGAGGTTGTGAGGGAAGAGCAAAGTGTCAATGAGACTAATATGGAAACTGAAAGATTGACTGAAAGGCAAGCAAATGGGGAAGTTGCGACGAAAGTTTATGTTGGAGGGATTCCTTATTACTCGACGGAGGATGATATTCAAAGTTACTTTGAAAGCTGTGGCTCCATTACTGAGATTGATTGTATGAAGTTTCCTGACAGTGGGAAGTTCAAAGGAATTGCCATTATTAGCTTTAGGACGGAAGCTGCAGCTAAACGAGCCTTGGCTCTTGATGGAGCTGACATGGGTGGACTGTTTCTGAAAATCCAACCTTACAAAACAACTCGGGTCAATAAAGTAGTCAATAAAGTATCTGATTTTGCCCCAAAAATTGTGAAGGGCTACAATAGAATCTACGTTGGAAATTTGTCTTGGGATATCACTGAGGACGAACTGAGGAAACTTTTCTCAGATTGCAAGATATCGTCTATCAATTTTGGCATGGATAAGGAAACAGGAGAATTCCGAGGCTATGCCCATGTGGAATTTTCCGACAGTCTCTCACTGACAATGGCATTGAAGTTGGATCAGAAGATTGTTCTGGGGAGACCTGTCAAGATAAGCTGTGCAGTTCCTCTGAGAAAACCAGGGATCCATCCCAAGTCTGTATCCACAACCATGGGTACCCTTTCGGAGGCTGTAGCTACTACTGCAAGTGCAGGAGCTGATAATGCCAGGTTGAGTGCCATCACTGGTAAGCTTAAGAGAAGGACCTGCTATGAGTGTGGTGAAAAGGGCCATGTTTCTTCACTTTGTCCAATGAAGCAACCTGTGAATGTAATAGATACTAATGCATCCTATACAAAGCCTGTAACAAGTACAAGTATGCTTTTGGAGTCTGTAACAACAAGTACAGAAGCTGCTAATACTGAGTTGAGTTTGGTCAATGGTAAGATCAAGAGAAGGACATGCTATGGGTGTGGTGAAAAGGGCCATGTTTCTACAGCTTGTCCAAAGAAGCAATCTGCTGGTGCAATAATAGATACCAATGCCACCCCTACGACGCCTGTACATACAATTACAAGTCCTGTATGGGAGACCGTAGCTATAACTCCAAGTACAGGAGTTGATAATACTGGGTTGAGTTCCATCAGCGGTAAGATTAAGAGAAGAACATGTTACGAATGTGGGGAAAAAGGTCATGTTTCTACAGCTTGTCCAAACAAACAATATGCTCAGCCAATAGAAACCACTGCAAGTCATATGAAGCCTGTACCTACAACGTCAACACCCCTTCTGGAGTCTGCAGCTACAACTACAAGTACAGAACCCGATAATGCTGGGTTGAGCTCCATTAGCGGTAAGATTAAGAGAAGGACGTGCTATGAGTGTGGTGAAAAGGGCCATATATCTTCAGCTTGTCCAAAGAAACAATCTGTCGATAACAATGCAAGCTGA

Protein Analysis

701

Amino Acids

75.71

Weight (kDa)

9.08

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 255 - 322 1.7e-12 RNA recognition motif
RRM_1 PF00076 354 - 421 1.5e-12 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55340
fragaria_vesca FvH4_7g21531
malus_domestica MD01G1122100.v1.1 MD07G1191600.v1.1
prunus_persica Prupe.2G229600_v2.0.a1 Prupe.2G229700_v2.0.a1
pyrus_communis pycom01g14890 pycom07g18100
rosa_chinensis RchiOBHm_Chr1g0365851
rosa_laevigata RLG00000027386
rosa_multiflora Rmu_sc0023137.1_g000001 Rmu_sc0041703.1_g000001
rosa_roxburghii Rroxscaffold_4G00290800
rosa_rugosa Rorug01G0325000
rosa_samantha Rh1AG334000 Rh1BG294600 Rh1CG311300 Rh1DG327000
rosa_wichuraiana Rw1G029630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1430
Acc65I GGTACC 1 cut(s) 1331
AccB1I GGYRCC 1 cut(s) 1331
AciI CCGC 7 cut(s) 210, 227, 240, 243, 329, 1803, 2007
AclWI GGATC 3 cut(s) 1242, 1294, 1307
AcsI RAATTY 4 cut(s) 121, 1072, 1169, 1193
AcuI CTGAAG 2 cut(s) 44, 2046
AcyI GRCGYC 1 cut(s) 1712
AfaI GTAC 7 cut(s) 1333, 1528, 1561, 1719, 1768, 1923, 1972
AfeI AGCGCT 1 cut(s) 147
AfiI CCNNNNNNNGG 3 cut(s) 869, 1342, 1769
AflII CTTAAG 1 cut(s) 1409
AflIII ACRYGT 1 cut(s) 1823
AgsI TTSAA 5 cut(s) 346, 809, 821, 880, 1228
AhdI GACNNNNNGTC 1 cut(s) 358
AjiI CACGTC 1 cut(s) 2028
AjnI CCWGG 2 cut(s) 1294, 1382
AjuI GAANNNNNNNTTGG 2 cut(s) 1063, 1095
Alw21I GWGCWC 1 cut(s) 2000
Alw26I GTCTC 4 cut(s) 695, 1211, 1249, 1739
AlwI GGATC 3 cut(s) 1242, 1294, 1307
AlwNI CAGNNNCTG 2 cut(s) 1373, 1568
Ama87I CYCGRG 2 cut(s) 88, 993
Aor51HI AGCGCT 1 cut(s) 147
AoxI GGCC 3 cut(s) 1444, 1639, 2050
ApeKI GCWGC 8 cut(s) 28, 31, 127, 237, 914, 917, 1568, 1955
ApoI RAATTY 4 cut(s) 121, 1072, 1169, 1193
Asp700I GAANNNNTTC 1 cut(s) 1112
Asp718I GGTACC 1 cut(s) 1331
AspLEI GCGC 1 cut(s) 148
AspS9I GGNCC 6 cut(s) 221, 360, 1419, 1444, 1639, 2050
AsuHPI GGTGA 3 cut(s) 1448, 1643, 2054
AsuII TTCGAA 1 cut(s) 69
AvaI CYCGRG 2 cut(s) 88, 993
AvaII GGWCC 3 cut(s) 221, 360, 1419
BamHI GGATCC 1 cut(s) 1299
BanI GGYRCC 1 cut(s) 1331
BanII GRGCYC 1 cut(s) 2000
Bbv12I GWGCWC 1 cut(s) 2000
BbvI GCAGC 8 cut(s) 40, 43, 139, 249, 901, 929, 1555, 1967
BccI CCATC 4 cut(s) 935, 1311, 1403, 1805
BcgI CGANNNNNNTGC 1 cut(s) 2078
BciT130I CCWGG 2 cut(s) 1296, 1384
BciVI GTATCC 1 cut(s) 1327
BcoDI GTCTC 4 cut(s) 695, 1211, 1249, 1739
BfmI CTRYAG 5 cut(s) 915, 1347, 1650, 1857, 1953
BfoI RGCGCY 1 cut(s) 149
BfrI CTTAAG 1 cut(s) 1409
BfuAI ACCTGC 1 cut(s) 1430
BfuI GTATCC 1 cut(s) 1327
BlpI GCTNAGC 1 cut(s) 1884
Bme1390I CCNGG 2 cut(s) 1296, 1384
Bme18I GGWCC 3 cut(s) 221, 360, 1419
BmeRI GACNNNNNGTC 1 cut(s) 358
BmeT110I CYCGRG 2 cut(s) 88, 993
BmgBI CACGTC 1 cut(s) 2028
BmgT120I GGNCC 6 cut(s) 221, 360, 1419, 1444, 1639, 2050
BmiI GGNNCC 4 cut(s) 361, 832, 1301, 1333
BmrFI CCNGG 2 cut(s) 1296, 1384
BmrI ACTGGG 1 cut(s) 1794
BmsI GCATC 1 cut(s) 1511
BmuI ACTGGG 1 cut(s) 1794
BpmI CTGGAG 1 cut(s) 1967
Bpu10I CCTNAGC 1 cut(s) 35
Bpu1102I GCTNAGC 1 cut(s) 1884
Bpu14I TTCGAA 1 cut(s) 69
BsaHI GRCGYC 1 cut(s) 1712
BsaI GGTCTC 2 cut(s) 1249, 1739
BsaJI CCNNGG 4 cut(s) 930, 1174, 1295, 1326
Bsc4I CCNNNNNNNGG 3 cut(s) 869, 1342, 1769
Bse1I ACTGG 2 cut(s) 1405, 1789
Bse3DI GCAATG 1 cut(s) 100
BseBI CCWGG 2 cut(s) 1296, 1384
BseDI CCNNGG 4 cut(s) 930, 1174, 1295, 1326
BseGI GGATG 3 cut(s) 805, 1303, 1502
BseLI CCNNNNNNNGG 3 cut(s) 869, 1342, 1769
BseMI GCAATG 1 cut(s) 100
BseMII CTCAG 8 cut(s) 131, 831, 1083, 1094, 1131, 1277, 1569, 1898
BseNI ACTGG 2 cut(s) 1405, 1789
BseXI GCAGC 8 cut(s) 40, 43, 139, 249, 901, 929, 1555, 1967
BseYI CCCAGC 2 cut(s) 173, 1988
BsgI GTGCAG 3 cut(s) 438, 1296, 1386
BshFI GGCC 3 cut(s) 1446, 1641, 2052
BshNI GGYRCC 1 cut(s) 1331
BsiHKAI GWGCWC 1 cut(s) 2000
BsiHKCI CYCGRG 2 cut(s) 88, 993
BsiSI CCGG 1 cut(s) 224
BslI CCNNNNNNNGG 3 cut(s) 869, 1342, 1769
BsmAI GTCTC 4 cut(s) 695, 1211, 1249, 1739
BsnI GGCC 3 cut(s) 1446, 1641, 2052
Bso31I GGTCTC 2 cut(s) 1249, 1739
BsoBI CYCGRG 2 cut(s) 88, 993
Bsp119I TTCGAA 1 cut(s) 69
Bsp1286I GDGCHC 1 cut(s) 2000
Bsp1407I TGTACA 1 cut(s) 1717
Bsp143I GATC 4 cut(s) 204, 1234, 1299, 1602
Bsp1720I GCTNAGC 1 cut(s) 1884
Bsp19I CCATGG 1 cut(s) 1326
BspACI CCGC 7 cut(s) 210, 227, 240, 243, 329, 1803, 2007
BspANI GGCC 3 cut(s) 1446, 1641, 2052
BspCNI CTCAG 8 cut(s) 132, 832, 1084, 1095, 1130, 1278, 1570, 1897
BspLI GGNNCC 4 cut(s) 361, 832, 1301, 1333
BspMAI CTGCAG 2 cut(s) 919, 1957
BspMI ACCTGC 1 cut(s) 1430
BspPI GGATC 3 cut(s) 1242, 1294, 1307
BspQI GCTCTTC 2 cut(s) 648, 678
BspT104I TTCGAA 1 cut(s) 69
BspT107I GGYRCC 1 cut(s) 1331
BspTI CTTAAG 1 cut(s) 1409
BspTNI GGTCTC 2 cut(s) 1249, 1739
BsrDI GCAATG 1 cut(s) 100
BsrGI TGTACA 1 cut(s) 1717
BsrI ACTGG 2 cut(s) 1405, 1789
BssECI CCNNGG 4 cut(s) 930, 1174, 1295, 1326
BssMI GATC 4 cut(s) 204, 1234, 1299, 1602
BssNI GRCGYC 1 cut(s) 1712
BssT1I CCWWGG 2 cut(s) 930, 1326
Bst2UI CCWGG 2 cut(s) 1296, 1384
Bst4CI ACNGT 4 cut(s) 869, 963, 1205, 1750
Bst6I CTCTTC 6 cut(s) 438, 491, 497, 621, 648, 678
BstACI GRCGYC 1 cut(s) 1712
BstAFI CTTAAG 1 cut(s) 1409
BstAUI TGTACA 1 cut(s) 1717
BstBI TTCGAA 1 cut(s) 69
BstC8I GCNNGC 3 cut(s) 189, 738, 2101
BstDSI CCRYGG 1 cut(s) 1326
BstENI CCTNNNNNAGG 1 cut(s) 1340
BstF5I GGATG 3 cut(s) 805, 1303, 1502
BstH2I RGCGCY 1 cut(s) 149
BstHHI GCGC 1 cut(s) 148
BstKTI GATC 4 cut(s) 207, 1237, 1302, 1605
BstMAI GTCTC 4 cut(s) 695, 1211, 1249, 1739
BstMBI GATC 4 cut(s) 204, 1234, 1299, 1602
BstMWI GCNNNNNNNGC 7 cut(s) 28, 136, 145, 926, 1358, 1379, 2004
BstNI CCWGG 2 cut(s) 1296, 1384
BstNSI RCATGY 2 cut(s) 1620, 1827
BstSCI CCNGG 2 cut(s) 1294, 1382
BstSFI CTRYAG 5 cut(s) 915, 1347, 1650, 1857, 1953
BstV1I GCAGC 8 cut(s) 40, 43, 139, 249, 901, 929, 1555, 1967
BstX2I RGATCY 1 cut(s) 1299
BstXI CCANNNNNNTGG 1 cut(s) 1327
BstYI RGATCY 1 cut(s) 1299
BsuI GTATCC 1 cut(s) 1327
BsuRI GGCC 3 cut(s) 1446, 1641, 2052
BtgI CCRYGG 1 cut(s) 1326
BtrI CACGTC 1 cut(s) 2028
BtsCI GGATG 3 cut(s) 805, 1303, 1502
BtsI GCAGTG 1 cut(s) 1899
BtsIMutI CAGTG 5 cut(s) 874, 1089, 1211, 1398, 1899
BveI ACCTGC 1 cut(s) 1430
Cac8I GCNNGC 3 cut(s) 189, 738, 2101
CaiI CAGNNNCTG 2 cut(s) 1373, 1568
CfoI GCGC 1 cut(s) 148
Cfr13I GGNCC 6 cut(s) 221, 360, 1419, 1444, 1639, 2050
CseI GACGC 1 cut(s) 1720
Csp6I GTAC 7 cut(s) 1332, 1527, 1560, 1718, 1767, 1922, 1971
CviAII CATG 9 cut(s) 952, 1150, 1187, 1327, 1448, 1617, 1643, 1824, 1850
CviQI GTAC 7 cut(s) 1332, 1527, 1560, 1718, 1767, 1922, 1971
DpnI GATC 4 cut(s) 206, 1236, 1301, 1604
DpnII GATC 4 cut(s) 204, 1234, 1299, 1602
DriI GACNNNNNGTC 1 cut(s) 358
Eam1104I CTCTTC 6 cut(s) 438, 491, 497, 621, 648, 678
Eam1105I GACNNNNNGTC 1 cut(s) 358
EarI CTCTTC 6 cut(s) 438, 491, 497, 621, 648, 678
Ecl136II GAGCTC 1 cut(s) 1998
Eco130I CCWWGG 2 cut(s) 930, 1326
Eco24I GRGCYC 1 cut(s) 2000
Eco31I GGTCTC 2 cut(s) 1249, 1739
Eco32I GATATC 2 cut(s) 1087, 1131
Eco47I GGWCC 3 cut(s) 221, 360, 1419
Eco47III AGCGCT 1 cut(s) 147
Eco53kI GAGCTC 1 cut(s) 1998
Eco57I CTGAAG 2 cut(s) 44, 2046
Eco88I CYCGRG 2 cut(s) 88, 993
EcoICRI GAGCTC 1 cut(s) 1998
EcoNI CCTNNNNNAGG 1 cut(s) 1340
EcoO109I RGGNCCY 1 cut(s) 1419
EcoRI GAATTC 2 cut(s) 121, 1169
EcoRII CCWGG 2 cut(s) 1294, 1382
EcoRV GATATC 2 cut(s) 1087, 1131
EcoT14I CCWWGG 2 cut(s) 930, 1326
EcoT22I ATGCAT 1 cut(s) 1504
EcoT38I GRGCYC 1 cut(s) 2000
ErhI CCWWGG 2 cut(s) 930, 1326
FaeI CATG 9 cut(s) 955, 1153, 1190, 1330, 1451, 1620, 1646, 1827, 1853
FalI AAGNNNNNCTT 2 cut(s) 161, 193
FatI CATG 9 cut(s) 951, 1149, 1186, 1326, 1447, 1616, 1642, 1823, 1849
FauI CCCGC 1 cut(s) 322
FauNDI CATATG 1 cut(s) 1911
FokI GGATG 3 cut(s) 812, 1290, 1489
FriOI GRGCYC 1 cut(s) 2000
GlaI GCGC 1 cut(s) 147
GsaI CCCAGC 2 cut(s) 177, 1992
GsuI CTGGAG 1 cut(s) 1967
HaeII RGCGCY 1 cut(s) 149
HaeIII GGCC 3 cut(s) 1446, 1641, 2052
HapII CCGG 1 cut(s) 224
HgaI GACGC 1 cut(s) 1720
HhaI GCGC 1 cut(s) 148
Hin1I GRCGYC 1 cut(s) 1712
Hin1II CATG 9 cut(s) 955, 1153, 1190, 1330, 1451, 1620, 1646, 1827, 1853
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HincII GTYRAC 1 cut(s) 1935
HindII GTYRAC 1 cut(s) 1935
HindIII AAGCTT 1 cut(s) 1406
HinfI GANTC 5 cut(s) 53, 778, 1059, 1544, 1949
HpaII CCGG 1 cut(s) 224
HphI GGTGA 3 cut(s) 1448, 1643, 2054
Hpy166II GTNNAC 2 cut(s) 959, 1935
Hpy188III TCNNGA 5 cut(s) 863, 938, 1264, 1606, 1946
Hpy8I GTNNAC 2 cut(s) 959, 1935
Hpy99I CGWCG 3 cut(s) 760, 796, 1714
HpyCH4III ACNGT 4 cut(s) 869, 963, 1205, 1750
HpyCH4IV ACGT 3 cut(s) 1065, 1931, 2027
HpyF10VI GCNNNNNNNGC 7 cut(s) 28, 136, 145, 926, 1358, 1379, 2004
HpySE526I ACGT 3 cut(s) 1065, 1931, 2027
Hsp92I GRCGYC 1 cut(s) 1712
Hsp92II CATG 9 cut(s) 955, 1153, 1190, 1330, 1451, 1620, 1646, 1827, 1853
HspAI GCGC 1 cut(s) 146
KpnI GGTACC 1 cut(s) 1335
Kzo9I GATC 4 cut(s) 204, 1234, 1299, 1602
LguI GCTCTTC 2 cut(s) 648, 678
LmnI GCTCC 5 cut(s) 314, 836, 944, 1370, 2003
Lsp1109I GCAGC 8 cut(s) 40, 43, 139, 249, 901, 929, 1555, 1967
LweI GCATC 1 cut(s) 1511
MaeII ACGT 3 cut(s) 1065, 1931, 2027
MaeIII GTNAC 4 cut(s) 812, 1519, 1549, 1826
MalI GATC 4 cut(s) 206, 1236, 1301, 1604
MboI GATC 4 cut(s) 204, 1234, 1299, 1602
MflI RGATCY 1 cut(s) 1299
MhlI GDGCHC 1 cut(s) 2000
MlyI GAGTC 2 cut(s) 1553, 1958
MmeI TCCRAC 6 cut(s) 108, 751, 1000, 1048, 1212, 1224
Mph1103I ATGCAT 1 cut(s) 1504
MroXI GAANNNNTTC 1 cut(s) 1112
MseI TTAA 3 cut(s) 1410, 1812, 2016
MslI CAYNNNNRTG 1 cut(s) 1325
MspA1I CMGCKG 2 cut(s) 240, 1803
MspCI CTTAAG 1 cut(s) 1409
MspI CCGG 1 cut(s) 224
MspR9I CCNGG 2 cut(s) 1296, 1384
MvaI CCWGG 2 cut(s) 1296, 1384
MwoI GCNNNNNNNGC 7 cut(s) 28, 136, 145, 926, 1358, 1379, 2004
NcoI CCATGG 1 cut(s) 1326
NdeI CATATG 1 cut(s) 1911
NdeII GATC 4 cut(s) 204, 1234, 1299, 1602
NlaIII CATG 9 cut(s) 955, 1153, 1190, 1330, 1451, 1620, 1646, 1827, 1853
NlaIV GGNNCC 4 cut(s) 361, 832, 1301, 1333
NsiI ATGCAT 1 cut(s) 1504
NspI RCATGY 2 cut(s) 1620, 1827
NspV TTCGAA 1 cut(s) 69
PciI ACATGT 1 cut(s) 1823
PciSI GCTCTTC 2 cut(s) 648, 678
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 188
PdmI GAANNNNTTC 1 cut(s) 1112
PfeI GAWTC 3 cut(s) 53, 778, 1059
PleI GAGTC 2 cut(s) 1552, 1957
PpsI GAGTC 2 cut(s) 1552, 1957
PpuMI RGGWCCY 1 cut(s) 1419
PscI ACATGT 1 cut(s) 1823
Psp124BI GAGCTC 1 cut(s) 2000
Psp5II RGGWCCY 1 cut(s) 1419
Psp6I CCWGG 2 cut(s) 1294, 1382
PspFI CCCAGC 2 cut(s) 173, 1988
PspGI CCWGG 2 cut(s) 1294, 1382
PspN4I GGNNCC 4 cut(s) 361, 832, 1301, 1333
PspPI GGNCC 6 cut(s) 221, 360, 1419, 1444, 1639, 2050
PspPPI RGGWCCY 1 cut(s) 1419
PstI CTGCAG 2 cut(s) 919, 1957
PstNI CAGNNNCTG 2 cut(s) 1373, 1568
PsuI RGATCY 1 cut(s) 1299
RsaI GTAC 7 cut(s) 1333, 1528, 1561, 1719, 1768, 1923, 1972
RsaNI GTAC 7 cut(s) 1332, 1527, 1560, 1718, 1767, 1922, 1971
RseI CAYNNNNRTG 1 cut(s) 1325
SacI GAGCTC 1 cut(s) 2000
SapI GCTCTTC 2 cut(s) 648, 678
SaqAI TTAA 3 cut(s) 1410, 1812, 2016
Sau3AI GATC 4 cut(s) 204, 1234, 1299, 1602
Sau96I GGNCC 6 cut(s) 221, 360, 1419, 1444, 1639, 2050
SchI GAGTC 2 cut(s) 1553, 1958
ScrFI CCNGG 2 cut(s) 1296, 1384
SduI GDGCHC 1 cut(s) 2000
SfaNI GCATC 1 cut(s) 1511
SfcI CTRYAG 5 cut(s) 915, 1347, 1650, 1857, 1953
SfuI TTCGAA 1 cut(s) 69
SinI GGWCC 3 cut(s) 221, 360, 1419
SmiMI CAYNNNNRTG 1 cut(s) 1325
SmlI CTYRAG 1 cut(s) 1409
SmoI CTYRAG 1 cut(s) 1409
SsiI CCGC 7 cut(s) 210, 227, 240, 243, 329, 1803, 2007
SstI GAGCTC 1 cut(s) 2000
StyD4I CCNGG 2 cut(s) 1294, 1382
StyI CCWWGG 2 cut(s) 930, 1326
TaaI ACNGT 4 cut(s) 869, 963, 1205, 1750
TaiI ACGT 3 cut(s) 1068, 1934, 2030
TaqI TCGA 4 cut(s) 69, 182, 791, 2088
TatI WGTACW 5 cut(s) 1526, 1559, 1717, 1766, 1970
TauI GCSGC 3 cut(s) 212, 230, 243
TfiI GAWTC 3 cut(s) 53, 778, 1059
Tru1I TTAA 3 cut(s) 1410, 1812, 2016
Tru9I TTAA 3 cut(s) 1410, 1812, 2016
TscAI CASTG 5 cut(s) 874, 1096, 1218, 1405, 1906
TseI GCWGC 8 cut(s) 28, 31, 127, 237, 914, 917, 1568, 1955
TspDTI ATGAA 3 cut(s) 869, 1484, 1928
TspGWI ACGGA 2 cut(s) 809, 923
TspRI CASTG 5 cut(s) 874, 1096, 1218, 1405, 1906
Vha464I CTTAAG 1 cut(s) 1409
VpaK11BI GGWCC 3 cut(s) 221, 360, 1419
XagI CCTNNNNNAGG 1 cut(s) 1340
XapI RAATTY 4 cut(s) 121, 1072, 1169, 1193
XceI RCATGY 2 cut(s) 1620, 1827
XmnI GAANNNNTTC 1 cut(s) 1112
Zsp2I ATGCAT 1 cut(s) 1504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.