Rw1G029630

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0012338
Physical Location & Seq
Forward (+)
57318811 .. 57322356
3546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G029630.1

Sequence Viewer

Length: 2088 bp
ATGGTTTTATCAAACCGAAAGCTGAAGCAACAGCTCAGGGAGAAGATAGCCGATTCTTTATTGACATTCGAAATCGTTAAGTCCGACCCGAGCAATGACGGGTCTGCAAACCCTGACCCGAATCCGCAGCAGCCCCAATCGCTGAGAGCGCTTCTGGGTTCGGCGAACCCGAAGCCCAGCTTGTCGAAGCGAGCGAAAAGGAGAAAGATCGCCGCTTTGAGAGGTCCGGCGGCGAGTGGCAGCGGCGGTAATTTTGAGGAAAACGAGGGGGAGGAAATTAGGTCAGAGGAATTGGGGGTTGAGAAGGAAAAGAGTGGAGCTTTGGGTTCGGAGGGAAATGGGGATTTGAAGAAGGAAAGTGGGTCGGAGAGTTTGGGGAAGAAGAAGAAGAAGAAGAAGAAGGAAAAGAGTGGAGATTTGGGTGCAGAGGGAAACGGGGATTTGGAGGAAGAGAAAAGTGAGATTGGGTCAGAGAGTTCGGGGAAGAAGAAGAGGAAGAGAGATGAGGAAGAAAAGAGTGGAGATTTGAGTTCAGAGGAAAATGGGGGTGTGAAGGAGGCTAAGAAACCAAAGAAGAAGAAGCCCAAGTGGAAGAAGAAGAAGGAGGCAAAGAGTGAGGAAGAGAAGGGTTTTGAGGTTGTGAAGGAAGACAAGAAGGGTTTTGAGGTTGTGAGGGAAGAGCAAAGTGTCAATGAGACTACTATGGAAACTGAAAGGCAAGCAAATGGGGAAGTTGCAACAAAAGTTTACGTTGGAGGGATTCCTTATTACTCGACGGAGGATGATATTCGAAGTTACTTTGAAAGCTGTGGCTCCATTACTGAGATTGATTGTATGAAGTTTCCTGACAGTGGGAAGTTCAAAGGAATTGCCATTATTAGCTTTAGGACGGAAGCTGCTGCTAAACGAGCATTGGCTCTTGATGGAGCTGACATGGGTGGACTGTTTCTGAAAATCCAGCCTTACAAAACAACTCGGGTCAATAAAGTAGTCAATAAAGTATCTGATTTTGCCCCAAAAATTGTGGAGGGCTACAATAGAATCTACGTTGGAAATTTGTCTTGGGATATCACTGAGGACGAACTGAGGAAACTTTTCTCAGATTGCAAGATATCGTCTATCAATTTTGGCTTGGATAAGGAAACAGGAGAATTCCGAGGCTATGCCCATGTGGAATTTTCCGACAGTCTCTCACTAACAATGGCATTGAAGTTGGATCAGAAGATTGTTCTAGGGAGACCTGTCAAGATAAGCTGTGCAGTTCCTCTAAGAAAACCAGGGATCTATCCCAAGTCTGTATCCACAACTACAGGTACCCTTTCGGAGGCTGTAGCTACTACTGCAAGTGCAGGAGCTGATAATGCCAGGTTGAGTGCCATCAGTGGTAAGCTTAAGAGAAGGACCTGCTATGAGTGTGGTGAAAAGGGCCATGTTTCTTCACTTTGTCCAATGAAGCAACCTGTGAATGTAATAGATACTAATGCATCCTATACAAAGCCTGTAACGAGTACAAGTATGCTTTTGGAGTCTGTAACAAGAAGTACAGAAGCTGCTAATACTGAGTTGAGCTCTGTCAGTGGCAAGATCAAGAGAAGGACATGCTATGAGTGTGGTGAAAAGGGCCATGTTTCTACAGCTTGTCCGAAGAAGCAATCTGCTGGTGCAATAATAGATACCAATGCCACCCCTACGACGCCTGTACATACAATTACAAGTCCTGTATGGGAGTCCGTAGCTATAACTCCAAGGACAGGAGTTGATAATACTGGGTTGAGTTCCATCAGCGGTAAGATTAAGAGAAGAACATGCTACGAATGTGGGGAAAAAGGTCATGTTTCTACAGCTTGTCCAAACAAACAATATGCTCAGCCAATAGAAACCACTGCAAGTCATGTGAAGCCTGTACCTACAACGCCAACACCCCTTCTGGAGTCTGCAGCTACAACTGCAAGTACAGAACCCGATAATGCTGGGTTGAGCTCCATTAGCGGTAAGATTAAGAGAAGGACGTGCTATGAGTGTGGTGAAAAGGGCCATATATCTTCTGCTTGTCCAAAGAAACAATCTGTTGATAACAATGCAAGCTGA

Protein Analysis

695

Amino Acids

75.11

Weight (kDa)

9.04

Isoelectric Point (pI)

45.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 249 - 316 4.6e-13 RNA recognition motif
RRM_1 PF00076 348 - 415 2.1e-12 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55340
fragaria_vesca FvH4_7g21531
malus_domestica MD01G1122100.v1.1 MD07G1191600.v1.1
prunus_persica Prupe.2G229600_v2.0.a1 Prupe.2G229700_v2.0.a1
pyrus_communis pycom01g14890 pycom07g18100
rosa_chinensis RchiOBHm_Chr1g0365851
rosa_laevigata RLG00000027386
rosa_multiflora Rmu_sc0023137.1_g000001 Rmu_sc0041703.1_g000001
rosa_roxburghii Rroxscaffold_4G00290800
rosa_rugosa Rorug01G0325000
rosa_samantha Rh1AG334000 Rh1BG294600 Rh1CG311300 Rh1DG327000
rosa_wichuraiana Rw1G029630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1412
Acc65I GGTACC 1 cut(s) 1313
AccB1I GGYRCC 1 cut(s) 1313
AciI CCGC 7 cut(s) 125, 213, 230, 243, 246, 1785, 1989
AclWI GGATC 2 cut(s) 1224, 1289
AcsI RAATTY 3 cut(s) 1054, 1151, 1175
AcuI CTGAAG 1 cut(s) 44
AcyI GRCGYC 1 cut(s) 1694
AfaI GTAC 6 cut(s) 1315, 1510, 1543, 1701, 1905, 1954
AfeI AGCGCT 1 cut(s) 150
AfiI CCNNNNNNNGG 3 cut(s) 851, 1324, 1751
AflII CTTAAG 1 cut(s) 1391
AgsI TTSAA 4 cut(s) 349, 803, 862, 1210
AjiI CACGTC 1 cut(s) 2010
AjnI CCWGG 2 cut(s) 1276, 1364
AjuI GAANNNNNNNTTGG 2 cut(s) 1045, 1077
Alw21I GWGCWC 2 cut(s) 1571, 1982
Alw26I GTCTC 3 cut(s) 689, 1193, 1231
AlwI GGATC 2 cut(s) 1224, 1289
AlwNI CAGNNNCTG 2 cut(s) 1355, 1550
Ama87I CYCGRG 2 cut(s) 88, 975
Aor51HI AGCGCT 1 cut(s) 150
AoxI GGCC 3 cut(s) 1426, 1621, 2032
ApeKI GCWGC 7 cut(s) 127, 130, 240, 896, 899, 1550, 1937
ApoI RAATTY 3 cut(s) 1054, 1151, 1175
Asp700I GAANNNNTTC 1 cut(s) 1094
Asp718I GGTACC 1 cut(s) 1313
AspLEI GCGC 1 cut(s) 151
AspS9I GGNCC 5 cut(s) 224, 1401, 1426, 1621, 2032
AsuHPI GGTGA 3 cut(s) 1430, 1625, 2036
AsuII TTCGAA 2 cut(s) 69, 790
AvaI CYCGRG 2 cut(s) 88, 975
AvaII GGWCC 2 cut(s) 224, 1401
BanI GGYRCC 1 cut(s) 1313
BanII GRGCYC 2 cut(s) 1571, 1982
BbsI GAAGAC 1 cut(s) 654
Bbv12I GWGCWC 2 cut(s) 1571, 1982
BbvI GCAGC 7 cut(s) 139, 142, 252, 883, 886, 1537, 1949
BccI CCATC 3 cut(s) 917, 1385, 1787
BciT130I CCWGG 2 cut(s) 1278, 1366
BciVI GTATCC 1 cut(s) 1309
BcoDI GTCTC 3 cut(s) 689, 1193, 1231
BfaI CTAG 1 cut(s) 1232
BfmI CTRYAG 5 cut(s) 1308, 1329, 1632, 1839, 1935
BfoI RGCGCY 1 cut(s) 152
BfrI CTTAAG 1 cut(s) 1391
BfuAI ACCTGC 1 cut(s) 1412
BfuI GTATCC 1 cut(s) 1309
BlpI GCTNAGC 1 cut(s) 1866
Bme1390I CCNGG 2 cut(s) 1278, 1366
Bme18I GGWCC 2 cut(s) 224, 1401
BmeT110I CYCGRG 2 cut(s) 88, 975
BmgBI CACGTC 1 cut(s) 2010
BmgT120I GGNCC 5 cut(s) 224, 1401, 1426, 1621, 2032
BmiI GGNNCC 2 cut(s) 814, 1315
BmrFI CCNGG 2 cut(s) 1278, 1366
BmrI ACTGGG 1 cut(s) 1776
BmsI GCATC 1 cut(s) 1493
BmuI ACTGGG 1 cut(s) 1776
BpiI GAAGAC 1 cut(s) 654
BplI GAGNNNNNCTC 2 cut(s) 1553, 1585
BpmI CTGGAG 1 cut(s) 1949
Bpu10I CCTNAGC 1 cut(s) 35
Bpu1102I GCTNAGC 1 cut(s) 1866
Bpu14I TTCGAA 2 cut(s) 69, 790
BsaHI GRCGYC 1 cut(s) 1694
BsaI GGTCTC 1 cut(s) 1231
BsaJI CCNNGG 3 cut(s) 1156, 1277, 1745
Bsc4I CCNNNNNNNGG 3 cut(s) 851, 1324, 1751
Bse1I ACTGG 1 cut(s) 1771
Bse3DI GCAATG 1 cut(s) 100
BseBI CCWGG 2 cut(s) 1278, 1366
BseDI CCNNGG 3 cut(s) 1156, 1277, 1745
BseGI GGATG 2 cut(s) 787, 1484
BseLI CCNNNNNNNGG 3 cut(s) 851, 1324, 1751
BseMI GCAATG 1 cut(s) 100
BseMII CTCAG 8 cut(s) 49, 134, 813, 1065, 1076, 1113, 1551, 1880
BseNI ACTGG 1 cut(s) 1771
BseXI GCAGC 7 cut(s) 139, 142, 252, 883, 886, 1537, 1949
BseYI CCCAGC 2 cut(s) 176, 1970
BsgI GTGCAG 3 cut(s) 444, 1278, 1368
BshFI GGCC 3 cut(s) 1428, 1623, 2034
BshNI GGYRCC 1 cut(s) 1313
BsiHKAI GWGCWC 2 cut(s) 1571, 1982
BsiHKCI CYCGRG 2 cut(s) 88, 975
BsiSI CCGG 1 cut(s) 227
BslI CCNNNNNNNGG 3 cut(s) 851, 1324, 1751
BsmAI GTCTC 3 cut(s) 689, 1193, 1231
BsnI GGCC 3 cut(s) 1428, 1623, 2034
Bso31I GGTCTC 1 cut(s) 1231
BsoBI CYCGRG 2 cut(s) 88, 975
Bsp119I TTCGAA 2 cut(s) 69, 790
Bsp1286I GDGCHC 2 cut(s) 1571, 1982
Bsp1407I TGTACA 1 cut(s) 1699
Bsp143I GATC 4 cut(s) 207, 1216, 1281, 1584
Bsp1720I GCTNAGC 1 cut(s) 1866
BspACI CCGC 7 cut(s) 125, 213, 230, 243, 246, 1785, 1989
BspANI GGCC 3 cut(s) 1428, 1623, 2034
BspCNI CTCAG 8 cut(s) 48, 135, 814, 1066, 1077, 1112, 1552, 1879
BspLI GGNNCC 2 cut(s) 814, 1315
BspMAI CTGCAG 1 cut(s) 1939
BspMI ACCTGC 1 cut(s) 1412
BspPI GGATC 2 cut(s) 1224, 1289
BspQI GCTCTTC 1 cut(s) 672
BspT104I TTCGAA 2 cut(s) 69, 790
BspT107I GGYRCC 1 cut(s) 1313
BspTI CTTAAG 1 cut(s) 1391
BspTNI GGTCTC 1 cut(s) 1231
BsrDI GCAATG 1 cut(s) 100
BsrGI TGTACA 1 cut(s) 1699
BsrI ACTGG 1 cut(s) 1771
BssECI CCNNGG 3 cut(s) 1156, 1277, 1745
BssMI GATC 4 cut(s) 207, 1216, 1281, 1584
BssNI GRCGYC 1 cut(s) 1694
BssT1I CCWWGG 1 cut(s) 1745
Bst2UI CCWGG 2 cut(s) 1278, 1366
Bst4CI ACNGT 3 cut(s) 851, 945, 1187
Bst6I CTCTTC 5 cut(s) 444, 485, 491, 615, 672
BstACI GRCGYC 1 cut(s) 1694
BstAFI CTTAAG 1 cut(s) 1391
BstAUI TGTACA 1 cut(s) 1699
BstBI TTCGAA 2 cut(s) 69, 790
BstC8I GCNNGC 3 cut(s) 192, 720, 2083
BstENI CCTNNNNNAGG 1 cut(s) 1322
BstF5I GGATG 2 cut(s) 787, 1484
BstH2I RGCGCY 1 cut(s) 152
BstHHI GCGC 1 cut(s) 151
BstKTI GATC 4 cut(s) 210, 1219, 1284, 1587
BstMAI GTCTC 3 cut(s) 689, 1193, 1231
BstMBI GATC 4 cut(s) 207, 1216, 1281, 1584
BstMWI GCNNNNNNNGC 7 cut(s) 139, 148, 908, 1340, 1361, 1946, 1986
BstNI CCWGG 2 cut(s) 1278, 1366
BstNSI RCATGY 2 cut(s) 1602, 1809
BstSCI CCNGG 2 cut(s) 1276, 1364
BstSFI CTRYAG 5 cut(s) 1308, 1329, 1632, 1839, 1935
BstV1I GCAGC 7 cut(s) 139, 142, 252, 883, 886, 1537, 1949
BstV2I GAAGAC 1 cut(s) 654
BstX2I RGATCY 1 cut(s) 1281
BstYI RGATCY 1 cut(s) 1281
BsuI GTATCC 1 cut(s) 1309
BsuRI GGCC 3 cut(s) 1428, 1623, 2034
BtrI CACGTC 1 cut(s) 2010
BtsCI GGATG 2 cut(s) 787, 1484
BtsI GCAGTG 1 cut(s) 1881
BtsIMutI CAGTG 5 cut(s) 856, 1071, 1387, 1582, 1881
BveI ACCTGC 1 cut(s) 1412
Cac8I GCNNGC 3 cut(s) 192, 720, 2083
CaiI CAGNNNCTG 2 cut(s) 1355, 1550
CfoI GCGC 1 cut(s) 151
Cfr13I GGNCC 5 cut(s) 224, 1401, 1426, 1621, 2032
CseI GACGC 1 cut(s) 1702
Csp6I GTAC 6 cut(s) 1314, 1509, 1542, 1700, 1904, 1953
CspCI CAANNNNNGTGG 2 cut(s) 1005, 1040
CviAII CATG 8 cut(s) 934, 1169, 1430, 1599, 1625, 1806, 1832, 1892
CviQI GTAC 6 cut(s) 1314, 1509, 1542, 1700, 1904, 1953
DpnI GATC 4 cut(s) 209, 1218, 1283, 1586
DpnII GATC 4 cut(s) 207, 1216, 1281, 1584
Eam1104I CTCTTC 5 cut(s) 444, 485, 491, 615, 672
EarI CTCTTC 5 cut(s) 444, 485, 491, 615, 672
Ecl136II GAGCTC 2 cut(s) 1569, 1980
Eco130I CCWWGG 1 cut(s) 1745
Eco24I GRGCYC 2 cut(s) 1571, 1982
Eco31I GGTCTC 1 cut(s) 1231
Eco32I GATATC 2 cut(s) 1069, 1113
Eco47I GGWCC 2 cut(s) 224, 1401
Eco47III AGCGCT 1 cut(s) 150
Eco53kI GAGCTC 2 cut(s) 1569, 1980
Eco57I CTGAAG 1 cut(s) 44
Eco88I CYCGRG 2 cut(s) 88, 975
EcoICRI GAGCTC 2 cut(s) 1569, 1980
EcoNI CCTNNNNNAGG 1 cut(s) 1322
EcoO109I RGGNCCY 1 cut(s) 1401
EcoRI GAATTC 1 cut(s) 1151
EcoRII CCWGG 2 cut(s) 1276, 1364
EcoRV GATATC 2 cut(s) 1069, 1113
EcoT14I CCWWGG 1 cut(s) 1745
EcoT22I ATGCAT 1 cut(s) 1486
EcoT38I GRGCYC 2 cut(s) 1571, 1982
ErhI CCWWGG 1 cut(s) 1745
FaeI CATG 8 cut(s) 937, 1172, 1433, 1602, 1628, 1809, 1835, 1895
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FatI CATG 8 cut(s) 933, 1168, 1429, 1598, 1624, 1805, 1831, 1891
FokI GGATG 2 cut(s) 794, 1471
FriOI GRGCYC 2 cut(s) 1571, 1982
FspBI CTAG 1 cut(s) 1232
GlaI GCGC 1 cut(s) 150
GsaI CCCAGC 2 cut(s) 180, 1974
GsuI CTGGAG 1 cut(s) 1949
HaeII RGCGCY 1 cut(s) 152
HaeIII GGCC 3 cut(s) 1428, 1623, 2034
HapII CCGG 1 cut(s) 227
HgaI GACGC 1 cut(s) 1702
HhaI GCGC 1 cut(s) 151
Hin1I GRCGYC 1 cut(s) 1694
Hin1II CATG 8 cut(s) 937, 1172, 1433, 1602, 1628, 1809, 1835, 1895
Hin6I GCGC 1 cut(s) 149
HinP1I GCGC 1 cut(s) 149
HindIII AAGCTT 1 cut(s) 1388
HinfI GANTC 7 cut(s) 53, 121, 760, 1041, 1526, 1727, 1931
HpaII CCGG 1 cut(s) 227
HphI GGTGA 3 cut(s) 1430, 1625, 2036
Hpy166II GTNNAC 2 cut(s) 748, 941
Hpy188III TCNNGA 5 cut(s) 845, 920, 1246, 1588, 1928
Hpy8I GTNNAC 2 cut(s) 748, 941
Hpy99I CGWCG 2 cut(s) 778, 1696
HpyCH4III ACNGT 3 cut(s) 851, 945, 1187
HpyCH4IV ACGT 3 cut(s) 750, 1047, 2009
HpyF10VI GCNNNNNNNGC 7 cut(s) 139, 148, 908, 1340, 1361, 1946, 1986
HpySE526I ACGT 3 cut(s) 750, 1047, 2009
Hsp92I GRCGYC 1 cut(s) 1694
Hsp92II CATG 8 cut(s) 937, 1172, 1433, 1602, 1628, 1809, 1835, 1895
HspAI GCGC 1 cut(s) 149
KpnI GGTACC 1 cut(s) 1317
Kzo9I GATC 4 cut(s) 207, 1216, 1281, 1584
LguI GCTCTTC 1 cut(s) 672
LmnI GCTCC 5 cut(s) 317, 818, 926, 1352, 1985
Lsp1109I GCAGC 7 cut(s) 139, 142, 252, 883, 886, 1537, 1949
LweI GCATC 1 cut(s) 1493
MaeI CTAG 1 cut(s) 1232
MaeII ACGT 3 cut(s) 750, 1047, 2009
MaeIII GTNAC 3 cut(s) 794, 1501, 1531
MalI GATC 4 cut(s) 209, 1218, 1283, 1586
MboI GATC 4 cut(s) 207, 1216, 1281, 1584
MflI RGATCY 1 cut(s) 1281
MhlI GDGCHC 2 cut(s) 1571, 1982
MlyI GAGTC 3 cut(s) 1535, 1736, 1940
MmeI TCCRAC 6 cut(s) 108, 345, 733, 1030, 1194, 1206
Mph1103I ATGCAT 1 cut(s) 1486
MroXI GAANNNNTTC 1 cut(s) 1094
MseI TTAA 4 cut(s) 78, 1392, 1794, 1998
MspA1I CMGCKG 2 cut(s) 243, 1785
MspCI CTTAAG 1 cut(s) 1391
MspI CCGG 1 cut(s) 227
MspR9I CCNGG 2 cut(s) 1278, 1366
MvaI CCWGG 2 cut(s) 1278, 1366
MwoI GCNNNNNNNGC 7 cut(s) 139, 148, 908, 1340, 1361, 1946, 1986
NdeII GATC 4 cut(s) 207, 1216, 1281, 1584
NlaIII CATG 8 cut(s) 937, 1172, 1433, 1602, 1628, 1809, 1835, 1895
NlaIV GGNNCC 2 cut(s) 814, 1315
NsiI ATGCAT 1 cut(s) 1486
NspI RCATGY 2 cut(s) 1602, 1809
NspV TTCGAA 2 cut(s) 69, 790
PciSI GCTCTTC 1 cut(s) 672
PcsI WCGNNNNNNNCGW 3 cut(s) 81, 167, 191
PdmI GAANNNNTTC 1 cut(s) 1094
PfeI GAWTC 4 cut(s) 53, 121, 760, 1041
PleI GAGTC 3 cut(s) 1534, 1735, 1939
PpsI GAGTC 3 cut(s) 1534, 1735, 1939
PpuMI RGGWCCY 1 cut(s) 1401
Psp124BI GAGCTC 2 cut(s) 1571, 1982
Psp5II RGGWCCY 1 cut(s) 1401
Psp6I CCWGG 2 cut(s) 1276, 1364
PspFI CCCAGC 2 cut(s) 176, 1970
PspGI CCWGG 2 cut(s) 1276, 1364
PspN4I GGNNCC 2 cut(s) 814, 1315
PspPI GGNCC 5 cut(s) 224, 1401, 1426, 1621, 2032
PspPPI RGGWCCY 1 cut(s) 1401
PstI CTGCAG 1 cut(s) 1939
PstNI CAGNNNCTG 2 cut(s) 1355, 1550
PsuI RGATCY 1 cut(s) 1281
RsaI GTAC 6 cut(s) 1315, 1510, 1543, 1701, 1905, 1954
RsaNI GTAC 6 cut(s) 1314, 1509, 1542, 1700, 1904, 1953
SacI GAGCTC 2 cut(s) 1571, 1982
SapI GCTCTTC 1 cut(s) 672
SaqAI TTAA 4 cut(s) 78, 1392, 1794, 1998
Sau3AI GATC 4 cut(s) 207, 1216, 1281, 1584
Sau96I GGNCC 5 cut(s) 224, 1401, 1426, 1621, 2032
SchI GAGTC 3 cut(s) 1535, 1736, 1940
ScrFI CCNGG 2 cut(s) 1278, 1366
SduI GDGCHC 2 cut(s) 1571, 1982
SfaNI GCATC 1 cut(s) 1493
SfcI CTRYAG 5 cut(s) 1308, 1329, 1632, 1839, 1935
SfuI TTCGAA 2 cut(s) 69, 790
SinI GGWCC 2 cut(s) 224, 1401
SmlI CTYRAG 1 cut(s) 1391
SmoI CTYRAG 1 cut(s) 1391
SsiI CCGC 7 cut(s) 125, 213, 230, 243, 246, 1785, 1989
SspMI CTAG 1 cut(s) 1232
SstI GAGCTC 2 cut(s) 1571, 1982
StyD4I CCNGG 2 cut(s) 1276, 1364
StyI CCWWGG 1 cut(s) 1745
TaaI ACNGT 3 cut(s) 851, 945, 1187
TaiI ACGT 3 cut(s) 753, 1050, 2012
TaqI TCGA 4 cut(s) 69, 185, 773, 790
TatI WGTACW 4 cut(s) 1508, 1541, 1699, 1952
TauI GCSGC 3 cut(s) 215, 233, 246
TfiI GAWTC 4 cut(s) 53, 121, 760, 1041
Tru1I TTAA 4 cut(s) 78, 1392, 1794, 1998
Tru9I TTAA 4 cut(s) 78, 1392, 1794, 1998
TscAI CASTG 5 cut(s) 856, 1078, 1387, 1582, 1888
TseI GCWGC 7 cut(s) 127, 130, 240, 896, 899, 1550, 1937
TspDTI ATGAA 2 cut(s) 851, 1466
TspGWI ACGGA 3 cut(s) 791, 905, 1720
TspRI CASTG 5 cut(s) 856, 1078, 1387, 1582, 1888
Vha464I CTTAAG 1 cut(s) 1391
VpaK11BI GGWCC 2 cut(s) 224, 1401
XagI CCTNNNNNAGG 1 cut(s) 1322
XapI RAATTY 3 cut(s) 1054, 1151, 1175
XceI RCATGY 2 cut(s) 1602, 1809
XmnI GAANNNNTTC 1 cut(s) 1094
XspI CTAG 1 cut(s) 1232
Zsp2I ATGCAT 1 cut(s) 1486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.