zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G55340 |
| fragaria_vesca | FvH4_7g21531 |
| malus_domestica | MD01G1122100.v1.1 MD07G1191600.v1.1 |
| prunus_persica | Prupe.2G229600_v2.0.a1 Prupe.2G229700_v2.0.a1 |
| pyrus_communis | pycom01g14890 pycom07g18100 |
| rosa_chinensis | RchiOBHm_Chr1g0365851 |
| rosa_laevigata | RLG00000027386 |
| rosa_multiflora | Rmu_sc0023137.1_g000001 Rmu_sc0041703.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00290800 |
| rosa_rugosa | Rorug01G0325000 |
| rosa_samantha | Rh1AG334000 Rh1BG294600 Rh1CG311300 Rh1DG327000 |
| rosa_wichuraiana | Rw1G029630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 125, 213, 230, 243, 246 |
| AcuI | CTGAAG | 1 cut(s) | 44 |
| AfeI | AGCGCT | 1 cut(s) | 150 |
| AgsI | TTSAA | 1 cut(s) | 349 |
| AluBI | AGCT | 4 cut(s) | 22, 34, 180, 320 |
| AluI | AGCT | 4 cut(s) | 22, 34, 180, 320 |
| Ama87I | CYCGRG | 1 cut(s) | 88 |
| Aor51HI | AGCGCT | 1 cut(s) | 150 |
| ApeKI | GCWGC | 3 cut(s) | 127, 130, 240 |
| AspLEI | GCGC | 1 cut(s) | 151 |
| AspS9I | GGNCC | 1 cut(s) | 224 |
| AsuII | TTCGAA | 1 cut(s) | 69 |
| AvaI | CYCGRG | 1 cut(s) | 88 |
| AvaII | GGWCC | 1 cut(s) | 224 |
| BbvI | GCAGC | 3 cut(s) | 139, 142, 252 |
| BfoI | RGCGCY | 1 cut(s) | 152 |
| BisI | GCNGC | 6 cut(s) | 128, 131, 213, 231, 241, 244 |
| BlsI | GCNGC | 6 cut(s) | 129, 132, 214, 232, 242, 245 |
| Bme18I | GGWCC | 1 cut(s) | 224 |
| BmeT110I | CYCGRG | 1 cut(s) | 88 |
| BmgT120I | GGNCC | 1 cut(s) | 224 |
| Bpu10I | CCTNAGC | 1 cut(s) | 35 |
| Bpu14I | TTCGAA | 1 cut(s) | 69 |
| Bse3DI | GCAATG | 1 cut(s) | 100 |
| BseGI | GGATG | 1 cut(s) | 277 |
| BseMI | GCAATG | 1 cut(s) | 100 |
| BseMII | CTCAG | 2 cut(s) | 49, 134 |
| BseXI | GCAGC | 3 cut(s) | 139, 142, 252 |
| BseYI | CCCAGC | 1 cut(s) | 176 |
| BsgI | GTGCAG | 1 cut(s) | 441 |
| BsiHKCI | CYCGRG | 1 cut(s) | 88 |
| BsiSI | CCGG | 1 cut(s) | 227 |
| BsoBI | CYCGRG | 1 cut(s) | 88 |
| Bsp119I | TTCGAA | 1 cut(s) | 69 |
| Bsp143I | GATC | 1 cut(s) | 207 |
| BspACI | CCGC | 5 cut(s) | 125, 213, 230, 243, 246 |
| BspCNI | CTCAG | 2 cut(s) | 48, 135 |
| BspT104I | TTCGAA | 1 cut(s) | 69 |
| BsrDI | GCAATG | 1 cut(s) | 100 |
| BssMI | GATC | 1 cut(s) | 207 |
| Bst6I | CTCTTC | 3 cut(s) | 441, 482, 488 |
| BstBI | TTCGAA | 1 cut(s) | 69 |
| BstC8I | GCNNGC | 1 cut(s) | 192 |
| BstDEI | CTNAG | 2 cut(s) | 35, 143 |
| BstF5I | GGATG | 1 cut(s) | 277 |
| BstH2I | RGCGCY | 1 cut(s) | 152 |
| BstHHI | GCGC | 1 cut(s) | 151 |
| BstKTI | GATC | 1 cut(s) | 210 |
| BstMBI | GATC | 1 cut(s) | 207 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 139, 148 |
| BstV1I | GCAGC | 3 cut(s) | 139, 142, 252 |
| BtsCI | GGATG | 1 cut(s) | 277 |
| Cac8I | GCNNGC | 1 cut(s) | 192 |
| CfoI | GCGC | 1 cut(s) | 151 |
| Cfr13I | GGNCC | 1 cut(s) | 224 |
| CviJI | RGCY | 7 cut(s) | 22, 34, 50, 133, 175, 180, 320 |
| CviKI_1 | RGCY | 7 cut(s) | 22, 34, 50, 133, 175, 180, 320 |
| DdeI | CTNAG | 2 cut(s) | 35, 143 |
| DpnI | GATC | 1 cut(s) | 209 |
| DpnII | GATC | 1 cut(s) | 207 |
| Eam1104I | CTCTTC | 3 cut(s) | 441, 482, 488 |
| EarI | CTCTTC | 3 cut(s) | 441, 482, 488 |
| Eco47I | GGWCC | 1 cut(s) | 224 |
| Eco47III | AGCGCT | 1 cut(s) | 150 |
| Eco57I | CTGAAG | 1 cut(s) | 44 |
| Eco88I | CYCGRG | 1 cut(s) | 88 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 164, 196 |
| Fnu4HI | GCNGC | 6 cut(s) | 128, 131, 213, 231, 241, 244 |
| FokI | GGATG | 1 cut(s) | 284 |
| Fsp4HI | GCNGC | 6 cut(s) | 128, 131, 213, 231, 241, 244 |
| GlaI | GCGC | 1 cut(s) | 150 |
| GluI | GCNGC | 6 cut(s) | 128, 131, 213, 231, 241, 244 |
| GsaI | CCCAGC | 1 cut(s) | 180 |
| HaeII | RGCGCY | 1 cut(s) | 152 |
| HapII | CCGG | 1 cut(s) | 227 |
| HhaI | GCGC | 1 cut(s) | 151 |
| Hin6I | GCGC | 1 cut(s) | 149 |
| HinP1I | GCGC | 1 cut(s) | 149 |
| HinfI | GANTC | 2 cut(s) | 53, 121 |
| HpaII | CCGG | 1 cut(s) | 227 |
| Hpy188I | TCNGA | 5 cut(s) | 85, 286, 331, 367, 469 |
| HpyAV | CCTTC | 3 cut(s) | 298, 346, 391 |
| HpyCH4V | TGCA | 2 cut(s) | 107, 422 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 139, 148 |
| HpyF3I | CTNAG | 2 cut(s) | 35, 143 |
| HspAI | GCGC | 1 cut(s) | 149 |
| Kzo9I | GATC | 1 cut(s) | 207 |
| LmnI | GCTCC | 1 cut(s) | 317 |
| LpnPI | CCDG | 5 cut(s) | 22, 126, 140, 190, 240 |
| Lsp1109I | GCAGC | 3 cut(s) | 139, 142, 252 |
| MalI | GATC | 1 cut(s) | 209 |
| MboI | GATC | 1 cut(s) | 207 |
| MluCI | AATT | 4 cut(s) | 250, 276, 290, 357 |
| MmeI | TCCRAC | 2 cut(s) | 108, 345 |
| MnlI | CCTC | 9 cut(s) | 215, 250, 259, 280, 325, 418, 436, 483, 496 |
| MseI | TTAA | 1 cut(s) | 78 |
| MspA1I | CMGCKG | 1 cut(s) | 243 |
| MspI | CCGG | 1 cut(s) | 227 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 139, 148 |
| NdeII | GATC | 1 cut(s) | 207 |
| NspV | TTCGAA | 1 cut(s) | 69 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 81, 167, 191 |
| PfeI | GAWTC | 2 cut(s) | 53, 121 |
| PkrI | GCNGC | 6 cut(s) | 129, 132, 214, 232, 242, 245 |
| PspFI | CCCAGC | 1 cut(s) | 176 |
| PspPI | GGNCC | 1 cut(s) | 224 |
| SaqAI | TTAA | 1 cut(s) | 78 |
| SatI | GCNGC | 6 cut(s) | 128, 131, 213, 231, 241, 244 |
| Sau3AI | GATC | 1 cut(s) | 207 |
| Sau96I | GGNCC | 1 cut(s) | 224 |
| SetI | ASST | 6 cut(s) | 24, 36, 182, 226, 284, 322 |
| SfuI | TTCGAA | 1 cut(s) | 69 |
| SinI | GGWCC | 1 cut(s) | 224 |
| Sse9I | AATT | 4 cut(s) | 250, 276, 290, 357 |
| SsiI | CCGC | 5 cut(s) | 125, 213, 230, 243, 246 |
| TaqI | TCGA | 2 cut(s) | 69, 185 |
| TasI | AATT | 4 cut(s) | 250, 276, 290, 357 |
| TauI | GCSGC | 3 cut(s) | 215, 233, 246 |
| TfiI | GAWTC | 2 cut(s) | 53, 121 |
| Tru1I | TTAA | 1 cut(s) | 78 |
| Tru9I | TTAA | 1 cut(s) | 78 |
| TseI | GCWGC | 3 cut(s) | 127, 130, 240 |
| TspDTI | ATGAA | 1 cut(s) | 288 |
| VpaK11BI | GGWCC | 1 cut(s) | 224 |