High mobility group B protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 244 |
| Acc36I | ACCTGC | 2 cut(s) | 121, 244 |
| AciI | CCGC | 4 cut(s) | 29, 52, 210, 239 |
| AfaI | GTAC | 1 cut(s) | 287 |
| AfeI | AGCGCT | 1 cut(s) | 121 |
| AgsI | TTSAA | 1 cut(s) | 386 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 62, 94 |
| AluBI | AGCT | 6 cut(s) | 185, 194, 206, 248, 260, 305 |
| AluI | AGCT | 6 cut(s) | 185, 194, 206, 248, 260, 305 |
| Alw26I | GTCTC | 2 cut(s) | 103, 320 |
| Aor51HI | AGCGCT | 1 cut(s) | 121 |
| ApeKI | GCWGC | 1 cut(s) | 266 |
| AspLEI | GCGC | 1 cut(s) | 122 |
| AspS9I | GGNCC | 1 cut(s) | 91 |
| AsuHPI | GGTGA | 1 cut(s) | 225 |
| AvaII | GGWCC | 1 cut(s) | 91 |
| BbsI | GAAGAC | 2 cut(s) | 414, 444 |
| BbvCI | CCTCAGC | 1 cut(s) | 402 |
| BbvI | GCAGC | 1 cut(s) | 278 |
| BcoDI | GTCTC | 2 cut(s) | 103, 320 |
| BfaI | CTAG | 1 cut(s) | 137 |
| BfoI | RGCGCY | 1 cut(s) | 123 |
| BfuAI | ACCTGC | 2 cut(s) | 121, 244 |
| BisI | GCNGC | 3 cut(s) | 30, 52, 267 |
| BlsI | GCNGC | 3 cut(s) | 31, 53, 268 |
| Bme18I | GGWCC | 1 cut(s) | 91 |
| BmgT120I | GGNCC | 1 cut(s) | 91 |
| BmiI | GGNNCC | 1 cut(s) | 93 |
| BmsI | GCATC | 1 cut(s) | 178 |
| BpiI | GAAGAC | 2 cut(s) | 414, 444 |
| Bpu10I | CCTNAGC | 1 cut(s) | 402 |
| BsaI | GGTCTC | 1 cut(s) | 103 |
| Bse3DI | GCAATG | 1 cut(s) | 369 |
| BseGI | GGATG | 3 cut(s) | 169, 328, 340 |
| BseMI | GCAATG | 1 cut(s) | 369 |
| BseMII | CTCAG | 1 cut(s) | 393 |
| BseXI | GCAGC | 1 cut(s) | 278 |
| BsmAI | GTCTC | 2 cut(s) | 103, 320 |
| BsmBI | CGTCTC | 1 cut(s) | 320 |
| Bso31I | GGTCTC | 1 cut(s) | 103 |
| BspACI | CCGC | 4 cut(s) | 29, 52, 210, 239 |
| BspCNI | CTCAG | 1 cut(s) | 394 |
| BspLI | GGNNCC | 1 cut(s) | 93 |
| BspMI | ACCTGC | 2 cut(s) | 121, 244 |
| BspTNI | GGTCTC | 1 cut(s) | 103 |
| BsrDI | GCAATG | 1 cut(s) | 369 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| Bst6I | CTCTTC | 2 cut(s) | 135, 387 |
| BstC8I | GCNNGC | 2 cut(s) | 118, 208 |
| BstDEI | CTNAG | 1 cut(s) | 402 |
| BstF5I | GGATG | 3 cut(s) | 169, 328, 340 |
| BstH2I | RGCGCY | 1 cut(s) | 123 |
| BstHHI | GCGC | 1 cut(s) | 122 |
| BstMAI | GTCTC | 2 cut(s) | 103, 320 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 38, 71, 191, 245, 266 |
| BstV1I | GCAGC | 1 cut(s) | 278 |
| BstV2I | GAAGAC | 2 cut(s) | 414, 444 |
| BtsCI | GGATG | 3 cut(s) | 169, 328, 340 |
| BveI | ACCTGC | 2 cut(s) | 121, 244 |
| Cac8I | GCNNGC | 2 cut(s) | 118, 208 |
| CfoI | GCGC | 1 cut(s) | 122 |
| Cfr13I | GGNCC | 1 cut(s) | 91 |
| Csp6I | GTAC | 1 cut(s) | 286 |
| CviJI | RGCY | 8 cut(s) | 41, 51, 185, 194, 206, 248, 260, 305 |
| CviKI_1 | RGCY | 8 cut(s) | 41, 51, 185, 194, 206, 248, 260, 305 |
| CviQI | GTAC | 1 cut(s) | 286 |
| DdeI | CTNAG | 1 cut(s) | 402 |
| Eam1104I | CTCTTC | 2 cut(s) | 135, 387 |
| EarI | CTCTTC | 2 cut(s) | 135, 387 |
| EciI | GGCGGA | 1 cut(s) | 225 |
| Eco31I | GGTCTC | 1 cut(s) | 103 |
| Eco47I | GGWCC | 1 cut(s) | 91 |
| Eco47III | AGCGCT | 1 cut(s) | 121 |
| EcoO109I | RGGNCCY | 1 cut(s) | 91 |
| Esp3I | CGTCTC | 1 cut(s) | 320 |
| FaiI | YATR | 4 cut(s) | 230, 253, 255, 299 |
| FauNDI | CATATG | 1 cut(s) | 253 |
| Fnu4HI | GCNGC | 3 cut(s) | 30, 52, 267 |
| FokI | GGATG | 3 cut(s) | 156, 335, 347 |
| Fsp4HI | GCNGC | 3 cut(s) | 30, 52, 267 |
| FspBI | CTAG | 1 cut(s) | 137 |
| GlaI | GCGC | 1 cut(s) | 121 |
| GluI | GCNGC | 3 cut(s) | 30, 52, 267 |
| HaeII | RGCGCY | 1 cut(s) | 123 |
| HhaI | GCGC | 1 cut(s) | 122 |
| Hin6I | GCGC | 1 cut(s) | 120 |
| HinP1I | GCGC | 1 cut(s) | 120 |
| HindIII | AAGCTT | 1 cut(s) | 303 |
| HphI | GGTGA | 1 cut(s) | 225 |
| Hpy166II | GTNNAC | 1 cut(s) | 157 |
| Hpy188I | TCNGA | 2 cut(s) | 8, 174 |
| Hpy188III | TCNNGA | 2 cut(s) | 137, 148 |
| Hpy8I | GTNNAC | 1 cut(s) | 157 |
| Hpy99I | CGWCG | 1 cut(s) | 434 |
| HpyAV | CCTTC | 2 cut(s) | 82, 370 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 38, 71, 191, 245, 266 |
| HpyF3I | CTNAG | 1 cut(s) | 402 |
| HspAI | GCGC | 1 cut(s) | 120 |
| LmnI | GCTCC | 1 cut(s) | 253 |
| LpnPI | CCDG | 4 cut(s) | 126, 133, 192, 249 |
| Lsp1109I | GCAGC | 1 cut(s) | 278 |
| LweI | GCATC | 1 cut(s) | 178 |
| MaeI | CTAG | 1 cut(s) | 137 |
| MaeIII | GTNAC | 1 cut(s) | 231 |
| MluCI | AATT | 1 cut(s) | 77 |
| MnlI | CCTC | 5 cut(s) | 31, 313, 325, 334, 397 |
| MslI | CAYNNNNRTG | 1 cut(s) | 174 |
| MspA1I | CMGCKG | 1 cut(s) | 194 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 38, 71, 191, 245, 266 |
| NdeI | CATATG | 1 cut(s) | 253 |
| NlaIV | GGNNCC | 1 cut(s) | 93 |
| NmuCI | GTSAC | 1 cut(s) | 231 |
| PaqCI | CACCTGC | 1 cut(s) | 244 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 438 |
| PkrI | GCNGC | 3 cut(s) | 31, 53, 268 |
| PpuMI | RGGWCCY | 1 cut(s) | 91 |
| Psp5II | RGGWCCY | 1 cut(s) | 91 |
| PspN4I | GGNNCC | 1 cut(s) | 93 |
| PspPI | GGNCC | 1 cut(s) | 91 |
| PspPPI | RGGWCCY | 1 cut(s) | 91 |
| PvuII | CAGCTG | 1 cut(s) | 194 |
| RsaI | GTAC | 1 cut(s) | 287 |
| RsaNI | GTAC | 1 cut(s) | 286 |
| RseI | CAYNNNNRTG | 1 cut(s) | 174 |
| SatI | GCNGC | 3 cut(s) | 30, 52, 267 |
| Sau96I | GGNCC | 1 cut(s) | 91 |
| SfaNI | GCATC | 1 cut(s) | 178 |
| SinI | GGWCC | 1 cut(s) | 91 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 174 |
| Sse9I | AATT | 1 cut(s) | 77 |
| SsiI | CCGC | 4 cut(s) | 29, 52, 210, 239 |
| SspMI | CTAG | 1 cut(s) | 137 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TasI | AATT | 1 cut(s) | 77 |
| TauI | GCSGC | 2 cut(s) | 32, 54 |
| TseFI | GTSAC | 1 cut(s) | 231 |
| TseI | GCWGC | 1 cut(s) | 266 |
| Tsp45I | GTSAC | 1 cut(s) | 231 |
| TspDTI | ATGAA | 4 cut(s) | 270, 314, 429, 450 |
| TspGWI | ACGGA | 2 cut(s) | 296, 344 |
| VpaK11BI | GGWCC | 1 cut(s) | 91 |
| XbaI | TCTAGA | 1 cut(s) | 136 |
| XspI | CTAG | 1 cut(s) | 137 |