High mobility group B protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 117, 273, 300 |
| AcoI | YGGCCR | 2 cut(s) | 126, 144 |
| AgsI | TTSAA | 2 cut(s) | 55, 203 |
| AluBI | AGCT | 5 cut(s) | 248, 257, 269, 311, 332 |
| AluI | AGCT | 5 cut(s) | 248, 257, 269, 311, 332 |
| Alw21I | GWGCWC | 1 cut(s) | 234 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 98 |
| AoxI | GGCC | 2 cut(s) | 126, 144 |
| ApeKI | GCWGC | 3 cut(s) | 8, 114, 329 |
| AspS9I | GGNCC | 1 cut(s) | 154 |
| AsuHPI | GGTGA | 1 cut(s) | 410 |
| AvaII | GGWCC | 1 cut(s) | 154 |
| BalI | TGGCCA | 1 cut(s) | 128 |
| Bbv12I | GWGCWC | 1 cut(s) | 234 |
| BbvCI | CCTCAGC | 1 cut(s) | 99 |
| BbvI | GCAGC | 2 cut(s) | 126, 341 |
| BccI | CCATC | 1 cut(s) | 389 |
| BciVI | GTATCC | 1 cut(s) | 382 |
| BfaI | CTAG | 1 cut(s) | 180 |
| BfuI | GTATCC | 1 cut(s) | 382 |
| BisI | GCNGC | 4 cut(s) | 9, 115, 300, 330 |
| BlsI | GCNGC | 4 cut(s) | 10, 116, 301, 331 |
| Bme18I | GGWCC | 1 cut(s) | 154 |
| BmgT120I | GGNCC | 1 cut(s) | 154 |
| BmiI | GGNNCC | 1 cut(s) | 156 |
| Bpu10I | CCTNAGC | 1 cut(s) | 99 |
| BseGI | GGATG | 2 cut(s) | 400, 499 |
| BseMII | CTCAG | 2 cut(s) | 90, 294 |
| BseRI | GAGGAG | 1 cut(s) | 467 |
| BseXI | GCAGC | 2 cut(s) | 126, 341 |
| BshFI | GGCC | 2 cut(s) | 128, 146 |
| BsiHKAI | GWGCWC | 1 cut(s) | 234 |
| BsmI | GAATGC | 1 cut(s) | 370 |
| BsnI | GGCC | 2 cut(s) | 128, 146 |
| Bsp1286I | GDGCHC | 1 cut(s) | 234 |
| BspACI | CCGC | 3 cut(s) | 117, 273, 300 |
| BspANI | GGCC | 2 cut(s) | 128, 146 |
| BspCNI | CTCAG | 2 cut(s) | 91, 295 |
| BspLI | GGNNCC | 1 cut(s) | 156 |
| Bst4CI | ACNGT | 1 cut(s) | 28 |
| Bst6I | CTCTTC | 1 cut(s) | 198 |
| BstC8I | GCNNGC | 3 cut(s) | 177, 271, 433 |
| BstDEI | CTNAG | 2 cut(s) | 99, 303 |
| BstF5I | GGATG | 2 cut(s) | 400, 499 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 254, 275, 308, 329 |
| BstV1I | GCAGC | 2 cut(s) | 126, 341 |
| BsuI | GTATCC | 1 cut(s) | 382 |
| BsuRI | GGCC | 2 cut(s) | 128, 146 |
| BtsCI | GGATG | 2 cut(s) | 400, 499 |
| BtsI | GCAGTG | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 3 cut(s) | 177, 271, 433 |
| CaiI | CAGNNNCTG | 1 cut(s) | 98 |
| Cfr13I | GGNCC | 1 cut(s) | 154 |
| CviAII | CATG | 1 cut(s) | 443 |
| DdeI | CTNAG | 2 cut(s) | 99, 303 |
| EaeI | YGGCCR | 2 cut(s) | 126, 144 |
| Eam1104I | CTCTTC | 1 cut(s) | 198 |
| EarI | CTCTTC | 1 cut(s) | 198 |
| EciI | GGCGGA | 1 cut(s) | 288 |
| Eco47I | GGWCC | 1 cut(s) | 154 |
| EcoO109I | RGGNCCY | 1 cut(s) | 154 |
| FaeI | CATG | 1 cut(s) | 446 |
| FaiI | YATR | 6 cut(s) | 293, 316, 318, 351, 362, 444 |
| FatI | CATG | 1 cut(s) | 442 |
| FauNDI | CATATG | 1 cut(s) | 316 |
| Fnu4HI | GCNGC | 4 cut(s) | 9, 115, 300, 330 |
| FokI | GGATG | 1 cut(s) | 407 |
| Fsp4HI | GCNGC | 4 cut(s) | 9, 115, 300, 330 |
| FspBI | CTAG | 1 cut(s) | 180 |
| GluI | GCNGC | 4 cut(s) | 9, 115, 300, 330 |
| HaeIII | GGCC | 2 cut(s) | 128, 146 |
| Hin1II | CATG | 1 cut(s) | 446 |
| HincII | GTYRAC | 2 cut(s) | 64, 106 |
| HindII | GTYRAC | 2 cut(s) | 64, 106 |
| HpaI | GTTAAC | 1 cut(s) | 106 |
| HphI | GGTGA | 1 cut(s) | 410 |
| Hpy166II | GTNNAC | 2 cut(s) | 64, 106 |
| Hpy188I | TCNGA | 1 cut(s) | 212 |
| Hpy188III | TCNNGA | 1 cut(s) | 200 |
| Hpy8I | GTNNAC | 2 cut(s) | 64, 106 |
| HpyAV | CCTTC | 1 cut(s) | 28 |
| HpyCH4III | ACNGT | 1 cut(s) | 28 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 254, 275, 308, 329 |
| HpyF3I | CTNAG | 2 cut(s) | 99, 303 |
| Hsp92II | CATG | 1 cut(s) | 446 |
| KspAI | GTTAAC | 1 cut(s) | 106 |
| LmnI | GCTCC | 2 cut(s) | 275, 316 |
| LpnPI | CCDG | 6 cut(s) | 72, 189, 255, 368, 429, 445 |
| Lsp1109I | GCAGC | 2 cut(s) | 126, 341 |
| MaeI | CTAG | 1 cut(s) | 180 |
| MaeIII | GTNAC | 1 cut(s) | 436 |
| MboII | GAAGA | 6 cut(s) | 43, 215, 422, 458, 479, 488 |
| MhlI | GDGCHC | 1 cut(s) | 234 |
| MlsI | TGGCCA | 1 cut(s) | 128 |
| MluCI | AATT | 1 cut(s) | 122 |
| MluNI | TGGCCA | 1 cut(s) | 128 |
| MnlI | CCTC | 5 cut(s) | 94, 379, 445, 457, 484 |
| Mox20I | TGGCCA | 1 cut(s) | 128 |
| MscI | TGGCCA | 1 cut(s) | 128 |
| MseI | TTAA | 1 cut(s) | 105 |
| MslI | CAYNNNNRTG | 2 cut(s) | 237, 447 |
| Msp20I | TGGCCA | 1 cut(s) | 128 |
| MspA1I | CMGCKG | 3 cut(s) | 117, 257, 302 |
| Mva1269I | GAATGC | 1 cut(s) | 370 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 254, 275, 308, 329 |
| NdeI | CATATG | 1 cut(s) | 316 |
| NlaIII | CATG | 1 cut(s) | 446 |
| NlaIV | GGNNCC | 1 cut(s) | 156 |
| NmuCI | GTSAC | 1 cut(s) | 436 |
| PctI | GAATGC | 1 cut(s) | 370 |
| PkrI | GCNGC | 4 cut(s) | 10, 116, 301, 331 |
| PpuMI | RGGWCCY | 1 cut(s) | 154 |
| Psp5II | RGGWCCY | 1 cut(s) | 154 |
| PspN4I | GGNNCC | 1 cut(s) | 156 |
| PspPI | GGNCC | 1 cut(s) | 154 |
| PspPPI | RGGWCCY | 1 cut(s) | 154 |
| PstNI | CAGNNNCTG | 1 cut(s) | 98 |
| PvuII | CAGCTG | 1 cut(s) | 257 |
| RseI | CAYNNNNRTG | 2 cut(s) | 237, 447 |
| SaqAI | TTAA | 1 cut(s) | 105 |
| SatI | GCNGC | 4 cut(s) | 9, 115, 300, 330 |
| Sau96I | GGNCC | 1 cut(s) | 154 |
| SduI | GDGCHC | 1 cut(s) | 234 |
| SetI | ASST | 8 cut(s) | 78, 105, 250, 259, 271, 313, 334, 418 |
| SinI | GGWCC | 1 cut(s) | 154 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 237, 447 |
| Sse9I | AATT | 1 cut(s) | 122 |
| SsiI | CCGC | 3 cut(s) | 117, 273, 300 |
| SspMI | CTAG | 1 cut(s) | 180 |
| TaaI | ACNGT | 1 cut(s) | 28 |
| TasI | AATT | 1 cut(s) | 122 |
| TauI | GCSGC | 1 cut(s) | 302 |
| Tru1I | TTAA | 1 cut(s) | 105 |
| Tru9I | TTAA | 1 cut(s) | 105 |
| TscAI | CASTG | 1 cut(s) | 99 |
| TseFI | GTSAC | 1 cut(s) | 436 |
| TseI | GCWGC | 3 cut(s) | 8, 114, 329 |
| Tsp45I | GTSAC | 1 cut(s) | 436 |
| TspDTI | ATGAA | 7 cut(s) | 17, 333, 366, 377, 423, 459, 489 |
| TspGWI | ACGGA | 2 cut(s) | 359, 407 |
| TspRI | CASTG | 1 cut(s) | 99 |
| VpaK11BI | GGWCC | 1 cut(s) | 154 |
| XspI | CTAG | 1 cut(s) | 180 |