Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0007142

Physical Location & Seq

Genomic Coordinates Reverse (-)

20323961 .. 20325468

Gene Structure 1508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g22880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGGCTCTCTCCAAACCCACCTTCCTTACCCACCTCAAAACCCTAGCAAAGCCCCCAATTCGCCGCCGTTTAGCGCCACCCTCTTTCATCTCCCTCCGTTTTCTCTCCTTCGCCACCCCCGAAGAAGCCGCCGCCGAACGACGCCAGCGCAAGCGCCGCCTCCGCCTCGAACCCCCTCTTTCCTCCCTCCACCGCAACCAGCAGCAGCAACAGAAACAGTCCCCAAAACCCCAAATAAACCCTAACGCCCCCAAGCTTCCCGAACCCGTTTCGGCCCTCTCCGGCAACCGCCTCAACCTCCATAACCGCATTCTCACCATCGTCCGCCAGAATGATCTCGAGGAGGCCGCTCTCTACACCCGCCACTCCATCTACTCCAACTGCCGACCCACCATTTTCACCGTCAACGCCGTGCTCACCGCTCAGCTCCGCCAGTCCAAGTACTCCGACCTCCTCACCCTCCACCGCTTCATCACTCAGGCCGGCGTTGCCCCCAATATCATCACTCACAATCTCATCTTCCAGACTTATATGGATTGTCGCAGGCCCGACACCGCCATGGAACACTACAAGCAGCTGATCAATGACGCCCCCTTCAACCCTTCCCCTACTACTTATCGGATTTTGATCAAAGGGTTGGTGGATAACAACAAATTGGACAGGGCTATGGAGCTCAAGGAGGAAATTGATGTCAAGGGTTTCGCACCGGACCCGGTTGTTTACCATTACTTGATGCAGGGATGTGTGAAGAATTCGGATTCGGATGGGGTTTTCAAGCTTTATGAGGAGTTGAAGGAGAAGCTGGGAGGGGCTGTGGAAGATGGGGTTGTGTATGGGAACTTGATGAAGGGGTTTTTCATGAGGGAGATGGAGAAGCAGGCCATGGATTGTTATGAGGAGGCTGTGGGAGAGAGTTCCAAGGTGAAGATGAGCGCCGTGGCTTATAATTCGGTTTTGGATGCCTTGAGCAAGAATGGCAAGTTTGATGAGGCATTTAGATTGTTTGATAGGATGATCCAGGAGCATAACCCGCCGAGGCGTTTGGCTGTGAATTTGGGAAGCTTTAATGTGATGGCGAACGGGTATTGCGCAGAGGGGAGGTTTAAGGATGCCATTGAGGTTTTCAGGAAGATGGGAGACTATAGGTGTAGTCCGGACGCATTGTCATTCAATAATTTGATTGAGCAATTATGTAAGAATGGGATGCTGAGTGAAGCTGAGGAGCTTTATGGAGAAATGCCCAACAAGGGAGTGAATCCGGATGAGTTTACATACGTTTTGTTGATGGATACTTGTTTCGAGGAGAATAGGCCCGATGATGCAGCTGAGTACTTCAGAAAAATGGTTGATGCCAAGCTGAGGCCGAACTTGGCAGTTTATAATAAGTTGGCTGATGGATTGGTTAAGCTATCAGTTTATAATGAAGACGTTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006349 GO:0006725 GO:0006807 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0016070 GO:0016787 GO:0016788 GO:0017076 GO:0019222 GO:0022414 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0035639 GO:0036094 GO:0040029 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

479

Amino Acids

54.55

Weight (kDa)

8.25

Isoelectric Point (pI)

49.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	202 - 250	5e-07	PPR repeat family
PPR_long	PF17177	293 - 451	1.1e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	309 - 338	1.1e-06	PPR repeat
PPR_2	PF13041	311 - 344	1.5e-07	PPR repeat family
PPR	PF01535	313 - 341	2.7e-08	PPR repeat
PPR_2	PF13041	353 - 394	1.2e-08	PPR repeat family
PPR	PF01535	354 - 381	5.4e-06	PPR repeat
PPR_1	PF12854	383 - 413	4.6e-08	PPR repeat
PPR_2	PF13041	385 - 432	8.8e-14	PPR repeat family
PPR	PF01535	389 - 418	3.5e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49240
fragaria_vesca	FvH4_2g09580
malus_domestica	MD07G1288700.v1.1
prunus_persica	Prupe.2G310200_v2.0.a1
pyrus_communis	pycom01g22880
rosa_chinensis	RchiOBHm_Chr1g0380631
rosa_laevigata	RLG00000026280
rosa_multiflora	Rmu_sc0004647.1_g000010 Rmu_sc0020141.1_g000001 Rmu_sc0020141.1_g000002 Rmu_sc0021483.1_g000003 Rmu_ssc0000015.1_g000013
rosa_roxburghii	Rroxscaffold_4G00279120
rosa_rugosa	Rorug01G0122900 Rorug01G0423100
rosa_samantha	Rh1AG447400 Rh1BG113000 Rh1BG151000 Rh1BG402900 Rh1CG417300 Rh1DG182800 Rh1DG433200 Rh7CG247500
rosa_wichuraiana	Rw1G038940 Rw7G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	945, 1380, 1419
Acc16I	TGCGCA	1 cut(s)	1090
AccBSI	CCGCTC	2 cut(s)	350, 422
AccIII	TCCGGA	2 cut(s)	1153, 1258
AclWI	GGATC	1 cut(s)	1009
AcsI	RAATTY	2 cut(s)	751, 1051
AcuI	CTGAAG	1 cut(s)	1318
AcyI	GRCGYC	2 cut(s)	142, 588
AfaI	GTAC	2 cut(s)	443, 1331
AfiI	CCNNNNNNNGG	2 cut(s)	1247, 1359
AgsI	TTSAA	4 cut(s)	598, 775, 793, 1171
AhdI	GACNNNNNGTC	1 cut(s)	1162
AjnI	CCWGG	1 cut(s)	1017
AjuI	GAANNNNNNNTTGG	1 cut(s)	37
Alw21I	GWGCWC	2 cut(s)	417, 675
Alw26I	GTCTC	1 cut(s)	1131
AlwI	GGATC	1 cut(s)	1009
Ama87I	CYCGRG	1 cut(s)	338
Aor13HI	TCCGGA	2 cut(s)	1153, 1258
AoxI	GGCC	7 cut(s)	273, 345, 480, 545, 879, 1310, 1361
ApeKI	GCWGC	4 cut(s)	202, 205, 574, 1322
ApoI	RAATTY	2 cut(s)	751, 1051
AspLEI	GCGC	5 cut(s)	76, 150, 156, 935, 1091
AspS9I	GGNCC	4 cut(s)	274, 546, 709, 1311
AsuC2I	CCSGG	1 cut(s)	713
AsuHPI	GGTGA	5 cut(s)	307, 391, 409, 448, 934
AvaI	CYCGRG	1 cut(s)	338
AvaII	GGWCC	1 cut(s)	709
BanII	GRGCYC	1 cut(s)	675
BbsI	GAAGAC	1 cut(s)	1431
Bbv12I	GWGCWC	2 cut(s)	417, 675
BbvCI	CCTCAGC	2 cut(s)	1218, 1358
BbvI	GCAGC	4 cut(s)	214, 217, 586, 1334
BccI	CCATC	9 cut(s)	326, 377, 758, 815, 862, 1066, 1126, 1279, 1388
BceAI	ACGGC	3 cut(s)	51, 395, 920
BciT130I	CCWGG	1 cut(s)	1019
BciVI	GTATCC	1 cut(s)	1282
BclI	TGATCA	2 cut(s)	579, 627
BcnI	CCSGG	1 cut(s)	713
BcoDI	GTCTC	1 cut(s)	1131
BfaI	CTAG	1 cut(s)	44
BfmI	CTRYAG	1 cut(s)	1141
BfoI	RGCGCY	3 cut(s)	77, 157, 936
BfuI	GTATCC	1 cut(s)	1282
BisI	GCNGC	9 cut(s)	64, 129, 132, 157, 203, 206, 348, 575, 1323
BlpI	GCTNAGC	1 cut(s)	423
BlsI	GCNGC	9 cut(s)	65, 130, 133, 158, 204, 207, 349, 576, 1324
BmcAI	AGTACT	2 cut(s)	443, 1331
Bme1390I	CCNGG	2 cut(s)	713, 1019
Bme18I	GGWCC	1 cut(s)	709
BmeRI	GACNNNNNGTC	1 cut(s)	1162
BmeT110I	CYCGRG	1 cut(s)	338
BmgT120I	GGNCC	4 cut(s)	274, 546, 709, 1311
BmiI	GGNNCC	1 cut(s)	711
BmrFI	CCNGG	2 cut(s)	713, 1019
BmsI	GCATC	6 cut(s)	723, 949, 1099, 1194, 1309, 1339
BpiI	GAAGAC	1 cut(s)	1431
Bpu10I	CCTNAGC	2 cut(s)	1218, 1358
Bpu1102I	GCTNAGC	1 cut(s)	423
BpuEI	CTTGAG	2 cut(s)	659, 985
BpuMI	CCSGG	1 cut(s)	713
BsaBI	GATNNNNATC	1 cut(s)	626
BsaHI	GRCGYC	2 cut(s)	142, 588
BsaJI	CCNNGG	5 cut(s)	558, 882, 918, 936, 1034
BsaWI	WCCGGW	3 cut(s)	706, 1153, 1258
BsaXI	ACNNNNNCTCC	2 cut(s)	798, 828
Bsc4I	CCNNNNNNNGG	2 cut(s)	1247, 1359
Bse118I	RCCGGY	1 cut(s)	482
Bse1I	ACTGG	1 cut(s)	433
Bse8I	GATNNNNATC	1 cut(s)	626
BseAI	TCCGGA	2 cut(s)	1153, 1258
BseBI	CCWGG	1 cut(s)	1019
BseDI	CCNNGG	5 cut(s)	558, 882, 918, 936, 1034
BseGI	GGATG	7 cut(s)	746, 769, 964, 1017, 1114, 1209, 1267
BseJI	GATNNNNATC	1 cut(s)	626
BseLI	CCNNNNNNNGG	2 cut(s)	1247, 1359
BseMII	CTCAG	6 cut(s)	437, 491, 1199, 1209, 1317, 1349
BseNI	ACTGG	1 cut(s)	433
BseRI	GAGGAG	6 cut(s)	356, 443, 800, 911, 1235, 1316
BseXI	GCAGC	4 cut(s)	214, 217, 586, 1334
BseYI	CCCAGC	1 cut(s)	802
BshFI	GGCC	7 cut(s)	275, 347, 482, 547, 881, 1312, 1363
BsiHKAI	GWGCWC	2 cut(s)	417, 675
BsiHKCI	CYCGRG	1 cut(s)	338
BsiSI	CCGG	6 cut(s)	282, 483, 707, 713, 1154, 1259
BslFI	GGGAC	1 cut(s)	205
BslI	CCNNNNNNNGG	2 cut(s)	1247, 1359
BsmAI	GTCTC	1 cut(s)	1131
BsmFI	GGGAC	1 cut(s)	205
BsmI	GAATGC	1 cut(s)	309
BsnI	GGCC	7 cut(s)	275, 347, 482, 547, 881, 1312, 1363
BsoBI	CYCGRG	1 cut(s)	338
Bsp1286I	GDGCHC	2 cut(s)	417, 675
Bsp13I	TCCGGA	2 cut(s)	1153, 1258
Bsp143I	GATC	4 cut(s)	334, 579, 627, 1014
Bsp1720I	GCTNAGC	1 cut(s)	423
Bsp19I	CCATGG	2 cut(s)	558, 882
BspANI	GGCC	7 cut(s)	275, 347, 482, 547, 881, 1312, 1363
BspCNI	CTCAG	6 cut(s)	436, 490, 1200, 1210, 1318, 1350
BspEI	TCCGGA	2 cut(s)	1153, 1258
BspHI	TCATGA	1 cut(s)	858
BspLI	GGNNCC	1 cut(s)	711
BspPI	GGATC	1 cut(s)	1009
BsrBI	CCGCTC	2 cut(s)	350, 422
BsrFI	RCCGGY	1 cut(s)	482
BsrI	ACTGG	1 cut(s)	433
BssAI	RCCGGY	1 cut(s)	482
BssECI	CCNNGG	5 cut(s)	558, 882, 918, 936, 1034
BssMI	GATC	4 cut(s)	334, 579, 627, 1014
BssNI	GRCGYC	2 cut(s)	142, 588
BssT1I	CCWWGG	3 cut(s)	558, 882, 918
Bst2UI	CCWGG	1 cut(s)	1019
Bst4CI	ACNGT	2 cut(s)	219, 403
BstACI	GRCGYC	2 cut(s)	142, 588
BstC8I	GCNNGC	5 cut(s)	146, 152, 484, 545, 879
BstDEI	CTNAG	6 cut(s)	423, 477, 1208, 1218, 1326, 1358
BstDSI	CCRYGG	3 cut(s)	558, 882, 936
BstF5I	GGATG	7 cut(s)	746, 769, 964, 1017, 1114, 1209, 1267
BstH2I	RGCGCY	3 cut(s)	77, 157, 936
BstHHI	GCGC	5 cut(s)	76, 150, 156, 935, 1091
BstKTI	GATC	4 cut(s)	337, 582, 630, 1017
BstMAI	GTCTC	1 cut(s)	1131
BstMBI	GATC	4 cut(s)	334, 579, 627, 1014
BstMWI	GCNNNNNNNGC	5 cut(s)	156, 162, 488, 975, 1030
BstNI	CCWGG	1 cut(s)	1019
BstSCI	CCNGG	2 cut(s)	711, 1017
BstSFI	CTRYAG	1 cut(s)	1141
BstV1I	GCAGC	4 cut(s)	214, 217, 586, 1334
BstV2I	GAAGAC	1 cut(s)	1431
BsuI	GTATCC	1 cut(s)	1282
BsuRI	GGCC	7 cut(s)	275, 347, 482, 547, 881, 1312, 1363
BtgI	CCRYGG	3 cut(s)	558, 882, 936
BtsCI	GGATG	7 cut(s)	746, 769, 964, 1017, 1114, 1209, 1267
Cac8I	GCNNGC	5 cut(s)	146, 152, 484, 545, 879
CciI	TCATGA	1 cut(s)	858
CfoI	GCGC	5 cut(s)	76, 150, 156, 935, 1091
Cfr10I	RCCGGY	1 cut(s)	482
Cfr13I	GGNCC	4 cut(s)	274, 546, 709, 1311
CseI	GACGC	3 cut(s)	150, 596, 1166
Csp6I	GTAC	2 cut(s)	442, 1330
CviAII	CATG	3 cut(s)	559, 859, 883
CviQI	GTAC	2 cut(s)	442, 1330
DdeI	CTNAG	6 cut(s)	423, 477, 1208, 1218, 1326, 1358
DpnI	GATC	4 cut(s)	336, 581, 629, 1016
DpnII	GATC	4 cut(s)	334, 579, 627, 1014
DriI	GACNNNNNGTC	1 cut(s)	1162
Eam1105I	GACNNNNNGTC	1 cut(s)	1162
EciI	GGCGGA	3 cut(s)	152, 314, 419
Ecl136II	GAGCTC	1 cut(s)	673
Eco130I	CCWWGG	3 cut(s)	558, 882, 918
Eco24I	GRGCYC	1 cut(s)	675
Eco47I	GGWCC	1 cut(s)	709
Eco53kI	GAGCTC	1 cut(s)	673
Eco57I	CTGAAG	1 cut(s)	1318
Eco88I	CYCGRG	1 cut(s)	338
EcoICRI	GAGCTC	1 cut(s)	673
EcoRI	GAATTC	1 cut(s)	751
EcoRII	CCWGG	1 cut(s)	1017
EcoT14I	CCWWGG	3 cut(s)	558, 882, 918
EcoT38I	GRGCYC	1 cut(s)	675
ErhI	CCWWGG	3 cut(s)	558, 882, 918
FaeI	CATG	3 cut(s)	562, 862, 886
FaqI	GGGAC	1 cut(s)	205
FatI	CATG	3 cut(s)	558, 858, 882
FauI	CCCGC	2 cut(s)	368, 1038
FbaI	TGATCA	2 cut(s)	579, 627
Fnu4HI	GCNGC	9 cut(s)	64, 129, 132, 157, 203, 206, 348, 575, 1323
FokI	GGATG	7 cut(s)	753, 776, 971, 1024, 1121, 1216, 1274
FriOI	GRGCYC	1 cut(s)	675
Fsp4HI	GCNGC	9 cut(s)	64, 129, 132, 157, 203, 206, 348, 575, 1323
FspBI	CTAG	1 cut(s)	44
FspI	TGCGCA	1 cut(s)	1090
GlaI	GCGC	5 cut(s)	75, 149, 155, 934, 1090
GluI	GCNGC	9 cut(s)	64, 129, 132, 157, 203, 206, 348, 575, 1323
GsaI	CCCAGC	1 cut(s)	806
HaeII	RGCGCY	3 cut(s)	77, 157, 936
HaeIII	GGCC	7 cut(s)	275, 347, 482, 547, 881, 1312, 1363
HapII	CCGG	6 cut(s)	282, 483, 707, 713, 1154, 1259
HgaI	GACGC	3 cut(s)	150, 596, 1166
HhaI	GCGC	5 cut(s)	76, 150, 156, 935, 1091
Hin1I	GRCGYC	2 cut(s)	142, 588
Hin1II	CATG	3 cut(s)	562, 862, 886
Hin6I	GCGC	5 cut(s)	74, 148, 154, 933, 1089
HinP1I	GCGC	5 cut(s)	74, 148, 154, 933, 1089
HincII	GTYRAC	1 cut(s)	406
HindII	GTYRAC	1 cut(s)	406
HindIII	AAGCTT	3 cut(s)	254, 776, 1060
HinfI	GANTC	2 cut(s)	758, 1255
HpaII	CCGG	6 cut(s)	282, 483, 707, 713, 1154, 1259
HphI	GGTGA	5 cut(s)	307, 391, 409, 448, 934
Hpy166II	GTNNAC	3 cut(s)	406, 721, 1269
Hpy188I	TCNGA	5 cut(s)	448, 621, 757, 763, 1337
Hpy188III	TCNNGA	7 cut(s)	260, 338, 523, 859, 1126, 1154, 1259
Hpy8I	GTNNAC	3 cut(s)	406, 721, 1269
Hpy99I	CGWCG	1 cut(s)	144
HpyAV	CCTTC	6 cut(s)	31, 118, 604, 612, 787, 841
HpyCH4III	ACNGT	2 cut(s)	219, 403
HpyCH4IV	ACGT	2 cut(s)	1275, 1428
HpyCH4V	TGCA	2 cut(s)	736, 1322
HpyF10VI	GCNNNNNNNGC	5 cut(s)	156, 162, 488, 975, 1030
HpyF3I	CTNAG	6 cut(s)	423, 477, 1208, 1218, 1326, 1358
HpySE526I	ACGT	2 cut(s)	1275, 1428
Hsp92I	GRCGYC	2 cut(s)	142, 588
Hsp92II	CATG	3 cut(s)	562, 862, 886
HspAI	GCGC	5 cut(s)	74, 148, 154, 933, 1089
Kpn2I	TCCGGA	2 cut(s)	1153, 1258
KroI	GCCGGC	1 cut(s)	482
KroNI	GCCGGC	1 cut(s)	484
Ksp22I	TGATCA	2 cut(s)	579, 627
Kzo9I	GATC	4 cut(s)	334, 579, 627, 1014
LmnI	GCTCC	4 cut(s)	432, 670, 1021, 1222
Lsp1109I	GCAGC	4 cut(s)	214, 217, 586, 1334
LweI	GCATC	6 cut(s)	723, 949, 1099, 1194, 1309, 1339
MaeI	CTAG	1 cut(s)	44
MaeII	ACGT	2 cut(s)	1275, 1428
MalI	GATC	4 cut(s)	336, 581, 629, 1016
MbiI	CCGCTC	2 cut(s)	350, 422
MboI	GATC	4 cut(s)	334, 579, 627, 1014
MboII	GAAGA	7 cut(s)	134, 511, 760, 830, 937, 1141, 1436
MhlI	GDGCHC	2 cut(s)	417, 675
MluCI	AATT	8 cut(s)	57, 653, 684, 751, 946, 1051, 1174, 1187
MmeI	TCCRAC	2 cut(s)	402, 471
MroI	TCCGGA	2 cut(s)	1153, 1258
MroNI	GCCGGC	1 cut(s)	482
MseI	TTAA	3 cut(s)	1065, 1104, 1404
MslI	CAYNNNNRTG	1 cut(s)	557
MspA1I	CMGCKG	2 cut(s)	577, 1325
MspI	CCGG	6 cut(s)	282, 483, 707, 713, 1154, 1259
MspR9I	CCNGG	2 cut(s)	713, 1019
Mva1269I	GAATGC	1 cut(s)	309
MvaI	CCWGG	1 cut(s)	1019
MwoI	GCNNNNNNNGC	5 cut(s)	156, 162, 488, 975, 1030
NaeI	GCCGGC	1 cut(s)	484
NciI	CCSGG	1 cut(s)	713
NcoI	CCATGG	2 cut(s)	558, 882
NdeII	GATC	4 cut(s)	334, 579, 627, 1014
NgoMIV	GCCGGC	1 cut(s)	482
NlaIII	CATG	3 cut(s)	562, 862, 886
NlaIV	GGNNCC	1 cut(s)	711
NmeAIII	GCCGAG	1 cut(s)	1059
NsbI	TGCGCA	1 cut(s)	1090
PaeR7I	CTCGAG	1 cut(s)	338
PagI	TCATGA	1 cut(s)	858
PcsI	WCGNNNNNNNCGW	1 cut(s)	117
PctI	GAATGC	1 cut(s)	309
PdiI	GCCGGC	1 cut(s)	484
PfeI	GAWTC	2 cut(s)	758, 1255
PfoI	TCCNGGA	1 cut(s)	1017
PkrI	GCNGC	9 cut(s)	65, 130, 133, 158, 204, 207, 349, 576, 1324
PsiI	TTATAA	3 cut(s)	945, 1380, 1419
Psp124BI	GAGCTC	1 cut(s)	675
Psp6I	CCWGG	1 cut(s)	1017
PspFI	CCCAGC	1 cut(s)	802
PspGI	CCWGG	1 cut(s)	1017
PspN4I	GGNNCC	1 cut(s)	711
PspPI	GGNCC	4 cut(s)	274, 546, 709, 1311
PvuII	CAGCTG	2 cut(s)	577, 1325
RsaI	GTAC	2 cut(s)	443, 1331
RsaNI	GTAC	2 cut(s)	442, 1330
RseI	CAYNNNNRTG	1 cut(s)	557
SacI	GAGCTC	1 cut(s)	675
SaqAI	TTAA	3 cut(s)	1065, 1104, 1404
SatI	GCNGC	9 cut(s)	64, 129, 132, 157, 203, 206, 348, 575, 1323
Sau3AI	GATC	4 cut(s)	334, 579, 627, 1014
Sau96I	GGNCC	4 cut(s)	274, 546, 709, 1311
ScaI	AGTACT	2 cut(s)	443, 1331
ScrFI	CCNGG	2 cut(s)	713, 1019
SduI	GDGCHC	2 cut(s)	417, 675
SfaNI	GCATC	6 cut(s)	723, 949, 1099, 1194, 1309, 1339
SfcI	CTRYAG	1 cut(s)	1141
Sfr274I	CTCGAG	1 cut(s)	338
SinI	GGWCC	1 cut(s)	709
SlaI	CTCGAG	1 cut(s)	338
SmiMI	CAYNNNNRTG	1 cut(s)	557
SmlI	CTYRAG	3 cut(s)	338, 674, 964
SmoI	CTYRAG	3 cut(s)	338, 674, 964
Sse9I	AATT	8 cut(s)	57, 653, 684, 751, 946, 1051, 1174, 1187
SspMI	CTAG	1 cut(s)	44
SstI	GAGCTC	1 cut(s)	675
StyD4I	CCNGG	2 cut(s)	711, 1017
StyI	CCWWGG	3 cut(s)	558, 882, 918
TaaI	ACNGT	2 cut(s)	219, 403
TaiI	ACGT	2 cut(s)	1278, 1431
TaqI	TCGA	3 cut(s)	168, 339, 1299
TasI	AATT	8 cut(s)	57, 653, 684, 751, 946, 1051, 1174, 1187
TatI	WGTACW	2 cut(s)	441, 1329
TauI	GCSGC	5 cut(s)	66, 131, 134, 159, 350
TfiI	GAWTC	2 cut(s)	758, 1255
Tru1I	TTAA	3 cut(s)	1065, 1104, 1404
Tru9I	TTAA	3 cut(s)	1065, 1104, 1404
TseI	GCWGC	4 cut(s)	202, 205, 574, 1322
TspDTI	ATGAA	5 cut(s)	76, 460, 847, 860, 1437
TspGWI	ACGGA	1 cut(s)	86
VpaK11BI	GGWCC	1 cut(s)	709
XapI	RAATTY	2 cut(s)	751, 1051
XhoI	CTCGAG	1 cut(s)	338
XspI	CTAG	1 cut(s)	44
ZrmI	AGTACT	2 cut(s)	443, 1331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.