Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G49240 |
| fragaria_vesca | FvH4_2g09580 |
| malus_domestica | MD07G1288700.v1.1 |
| prunus_persica | Prupe.2G310200_v2.0.a1 |
| pyrus_communis | pycom01g22880 |
| rosa_chinensis | RchiOBHm_Chr1g0380631 |
| rosa_laevigata | RLG00000026280 |
| rosa_multiflora | Rmu_sc0004647.1_g000010 Rmu_sc0020141.1_g000001 Rmu_sc0020141.1_g000002 Rmu_sc0021483.1_g000003 Rmu_ssc0000015.1_g000013 |
| rosa_roxburghii | Rroxscaffold_4G00279120 |
| rosa_rugosa | Rorug01G0122900 Rorug01G0423100 |
| rosa_samantha | Rh1AG447400 Rh1BG113000 Rh1BG151000 Rh1BG402900 Rh1CG417300 Rh1DG182800 Rh1DG433200 Rh7CG247500 |
| rosa_wichuraiana | Rw1G038940 Rw7G019950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 44 |
| AarI | CACCTGC | 1 cut(s) | 372 |
| Acc36I | ACCTGC | 1 cut(s) | 372 |
| AccI | GTMKAC | 1 cut(s) | 360 |
| AcuI | CTGAAG | 2 cut(s) | 242, 249 |
| AfeI | AGCGCT | 2 cut(s) | 283, 300 |
| AgsI | TTSAA | 2 cut(s) | 125, 130 |
| AluBI | AGCT | 5 cut(s) | 13, 33, 163, 233, 329 |
| AluI | AGCT | 5 cut(s) | 13, 33, 163, 233, 329 |
| Alw26I | GTCTC | 1 cut(s) | 346 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 13 |
| Aor51HI | AGCGCT | 2 cut(s) | 283, 300 |
| ApeKI | GCWGC | 4 cut(s) | 254, 263, 284, 301 |
| AspLEI | GCGC | 2 cut(s) | 284, 301 |
| AsuHPI | GGTGA | 1 cut(s) | 170 |
| BbvI | GCAGC | 4 cut(s) | 266, 271, 275, 288 |
| BccI | CCATC | 2 cut(s) | 111, 167 |
| BciVI | GTATCC | 1 cut(s) | 91 |
| BcoDI | GTCTC | 1 cut(s) | 346 |
| BfaI | CTAG | 2 cut(s) | 30, 326 |
| BfmI | CTRYAG | 1 cut(s) | 361 |
| BfoI | RGCGCY | 2 cut(s) | 285, 302 |
| BfuAI | ACCTGC | 1 cut(s) | 372 |
| BfuI | GTATCC | 1 cut(s) | 91 |
| BisI | GCNGC | 4 cut(s) | 255, 264, 285, 302 |
| BlsI | GCNGC | 4 cut(s) | 256, 265, 286, 303 |
| BmsI | GCATC | 3 cut(s) | 52, 72, 319 |
| Bpu10I | CCTNAGC | 2 cut(s) | 234, 240 |
| Bse1I | ACTGG | 1 cut(s) | 78 |
| BseGI | GGATG | 6 cut(s) | 28, 82, 115, 178, 190, 310 |
| BseMII | CTCAG | 1 cut(s) | 155 |
| BseNI | ACTGG | 1 cut(s) | 78 |
| BseRI | GAGGAG | 2 cut(s) | 149, 221 |
| BseXI | GCAGC | 4 cut(s) | 266, 271, 275, 288 |
| BslFI | GGGAC | 1 cut(s) | 18 |
| BsmAI | GTCTC | 1 cut(s) | 346 |
| BsmBI | CGTCTC | 1 cut(s) | 346 |
| BsmFI | GGGAC | 1 cut(s) | 18 |
| BspCNI | CTCAG | 1 cut(s) | 156 |
| BspMI | ACCTGC | 1 cut(s) | 372 |
| BsrI | ACTGG | 1 cut(s) | 78 |
| Bst4CI | ACNGT | 1 cut(s) | 105 |
| BstDEI | CTNAG | 3 cut(s) | 164, 234, 240 |
| BstF5I | GGATG | 6 cut(s) | 28, 82, 115, 178, 190, 310 |
| BstH2I | RGCGCY | 2 cut(s) | 285, 302 |
| BstHHI | GCGC | 2 cut(s) | 284, 301 |
| BstMAI | GTCTC | 1 cut(s) | 346 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 260, 263, 307 |
| BstSFI | CTRYAG | 1 cut(s) | 361 |
| BstV1I | GCAGC | 4 cut(s) | 266, 271, 275, 288 |
| BsuI | GTATCC | 1 cut(s) | 91 |
| BtsCI | GGATG | 6 cut(s) | 28, 82, 115, 178, 190, 310 |
| BtsIMutI | CAGTG | 1 cut(s) | 101 |
| BveI | ACCTGC | 1 cut(s) | 372 |
| CaiI | CAGNNNCTG | 1 cut(s) | 13 |
| CfoI | GCGC | 2 cut(s) | 284, 301 |
| CviJI | RGCY | 8 cut(s) | 13, 33, 163, 220, 227, 233, 239, 329 |
| CviKI_1 | RGCY | 8 cut(s) | 13, 33, 163, 220, 227, 233, 239, 329 |
| DdeI | CTNAG | 3 cut(s) | 164, 234, 240 |
| Eco47III | AGCGCT | 2 cut(s) | 283, 300 |
| Eco57I | CTGAAG | 2 cut(s) | 242, 249 |
| Esp3I | CGTCTC | 1 cut(s) | 346 |
| FaiI | YATR | 3 cut(s) | 44, 203, 316 |
| FaqI | GGGAC | 1 cut(s) | 18 |
| FblI | GTMKAC | 1 cut(s) | 360 |
| Fnu4HI | GCNGC | 4 cut(s) | 255, 264, 285, 302 |
| FokI | GGATG | 6 cut(s) | 35, 89, 122, 185, 197, 297 |
| Fsp4HI | GCNGC | 4 cut(s) | 255, 264, 285, 302 |
| FspBI | CTAG | 2 cut(s) | 30, 326 |
| GlaI | GCGC | 2 cut(s) | 283, 300 |
| GluI | GCNGC | 4 cut(s) | 255, 264, 285, 302 |
| HaeII | RGCGCY | 2 cut(s) | 285, 302 |
| HhaI | GCGC | 2 cut(s) | 284, 301 |
| Hin6I | GCGC | 2 cut(s) | 282, 299 |
| HinP1I | GCGC | 2 cut(s) | 282, 299 |
| HphI | GGTGA | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 1 cut(s) | 361 |
| Hpy8I | GTNNAC | 1 cut(s) | 361 |
| HpyAV | CCTTC | 3 cut(s) | 43, 205, 217 |
| HpyCH4III | ACNGT | 1 cut(s) | 105 |
| HpyCH4V | TGCA | 3 cut(s) | 65, 142, 310 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 260, 263, 307 |
| HpyF3I | CTNAG | 3 cut(s) | 164, 234, 240 |
| HspAI | GCGC | 2 cut(s) | 282, 299 |
| LpnPI | CCDG | 4 cut(s) | 51, 59, 128, 367 |
| Lsp1109I | GCAGC | 4 cut(s) | 266, 271, 275, 288 |
| LweI | GCATC | 3 cut(s) | 52, 72, 319 |
| MaeI | CTAG | 2 cut(s) | 30, 326 |
| MboII | GAAGA | 1 cut(s) | 351 |
| MluCI | AATT | 2 cut(s) | 125, 188 |
| MmeI | TCCRAC | 1 cut(s) | 87 |
| MnlI | CCTC | 5 cut(s) | 127, 175, 199, 244, 359 |
| MseI | TTAA | 1 cut(s) | 153 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 260, 263, 307 |
| PaqCI | CACCTGC | 1 cut(s) | 372 |
| PkrI | GCNGC | 4 cut(s) | 256, 265, 286, 303 |
| PsiI | TTATAA | 1 cut(s) | 44 |
| PstNI | CAGNNNCTG | 1 cut(s) | 13 |
| SaqAI | TTAA | 1 cut(s) | 153 |
| SatI | GCNGC | 4 cut(s) | 255, 264, 285, 302 |
| SetI | ASST | 8 cut(s) | 15, 35, 160, 165, 235, 331, 370, 386 |
| SfaNI | GCATC | 3 cut(s) | 52, 72, 319 |
| SfcI | CTRYAG | 1 cut(s) | 361 |
| SgeI | CNNG | 9 cut(s) | 42, 78, 86, 155, 333, 338, 342, 363, 368 |
| Sse9I | AATT | 2 cut(s) | 125, 188 |
| SspMI | CTAG | 2 cut(s) | 30, 326 |
| TaaI | ACNGT | 1 cut(s) | 105 |
| TasI | AATT | 2 cut(s) | 125, 188 |
| Tru1I | TTAA | 1 cut(s) | 153 |
| Tru9I | TTAA | 1 cut(s) | 153 |
| TscAI | CASTG | 1 cut(s) | 108 |
| TseI | GCWGC | 4 cut(s) | 254, 263, 284, 301 |
| TspDTI | ATGAA | 2 cut(s) | 62, 201 |
| TspRI | CASTG | 1 cut(s) | 108 |
| XmiI | GTMKAC | 1 cut(s) | 360 |
| XspI | CTAG | 2 cut(s) | 30, 326 |