Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0007142

Physical Location & Seq

Genomic Coordinates Reverse (-)

66473928 .. 66476425

Gene Structure 2498 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G038940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGAACTCAATTCCATCCCCTCATTTCTCTTCTCCATTTTCTAAAACCCTCTCAGAACCCCTTGTCTGCAAATCTCCCAAATCCATGGCTCTCTCCAAACCCTCCTTCCTCACCCACCTCAAAACCCTAGCCAAACCCCCCCACCGCCACCGCCACCTCCGCCGCCACACACCCCCCTCATTCCTCTCTCTGCGTTCCCTCTCCTTCGCCACCCCCGAAGACGCCGCCGCCGACCGCCGCCGCCGCAAGCGCCGCCTCCGCATCGAGCCCCCAATCTCCCCCCTCCACCGCTCCCAACAACAACAACAACCCCCAAAACCCCAAAACCCTAACTCCCCCAAGCTCCCGGAACCCGTCTCCGCTCTCTCCGGCAACCGCCTCAACCTCCACAACAAAATCCTCGCCCTCATCCGCCGCAACGACCTCGAAGAAGCCGCCCTCTACACCCGCCACTCCATCTACTCCAACTGCCGCCCCACCATCTACACCGTCAACTCCGTCCTCGCCGCCCAGCTCCGCCAGTCCAAGTACTCCGACCTCCTCTCCCTCCACCGCTTCATCACCCAGGCCGGCGTCGCCCCCAACATCGTCACCCACAACCTCATCTTCCAGACCTATCTCGACTGCCGGAAACCCGACACTGCTATGGAGCATTACAAGCAGCTCATCAACGACGCGCCGTTTAATCCTTCTCCGACGACCTACCGGATTCTGATCAAGGGGTTGGTGGACAATGGCAAGCTGGAGAGGGCCATGGAGCTCAAGGAGGAGATGGTTGATGTCAAGGGTTTCGGGCCGGACCCGGTTGTGTATCACTATCTGATGGTGGGGTGTGTGAGGAATTCGGATTCGGATGGCGTGTTTCGGCTTTACGAGGAGTTGAAGGAGAAGCTGGGAGGGGAGGTGGAGGATGGGGTTGTGATTGGGAGTTTGATGAAGGGGTATTTCATCAAGGAAATGGAGAAGGAGGCAATGGAGTGTTATGAACAGGCTTCGAAGGTGAAGATGAATGCGGTGGCGTATAACTCGGTGTTGGAGGCTTTGTGTGAGTATGGGAAGTTTGATGAGGCGTTGAAGTTGTTTGATAGGATGAGGGAGGAGCATTCCCCGCCTAGGAGGTTCACGGTGAATTTGGGGAGCTTTAATGTGATGGCGGACGGGTATTGTGCGCAGGGGAGGTTTAAGGAGGCGGTTGAGGTTTTTAGGAAGATGGGGGAGTATAGATGTGACCCGGATACGTTGTCGTTTAATAATTTGATTCAGCATTTGTGTAGCAATGGGATGCTGAGTGAGGCTGAGGAGGTTTATGGGGAGATGGGGGAGAAGGGGGTGAACCCGGATGAGTATACTTACTCGTTGTTGATGGATACTTGTTTTGAGGAGAATAGGTCTGATGATGCGGCTGAGTATTTTAGGAAAATGGTGGATGAGAAGTTGAGGCCGAATTTGGCTGTTTATGGTAGGTTGGTTGATGGGTTGGTTAAGGTGGGGAAGGTTGATGAGGCGAAATCGTTTTTTGATCTTATGGGGAAGAAGCTGAAGATGGATGTTGCGAGCTATCAGTTTATAATGAAGGCATTGAGTGATGCAGGGAAATTTGATGAGGTGCTTAATGTGGTGGATACATTGTTGGAGGACGAATGGATTGAATTGAATGAGGAGTTGCAGGAGTTCATCAAAGGGGAGCTGAGAAAGGATGGGAGAGAGGATGAATTGGGAAAGCTGATAGAGGAGAAGGCTGAGGCTGAGGCTAAGGCGAAGGAGATTGAGGAAGCAGAAGCAGCAAAGAGAAGTAGAAGTGCTGCTGTCTCCTCGTTACTTCCATCTAGTTTGTTTGGGAAGAAAGAGACAGGGTCTACAGAGGCCACTGAAAAAGTAGGTGAAGCTGCCTCAGCTTCTGTGGAGGCTGCTCCAGCTGCTGACACGAACTCGGCAGAGCAAGCAGTCAAAGGTGAAAGTTCAGATGAAGAATCCAAAAGCGAGGGTGCAAACGAGCAGGTAGTGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006349 GO:0006725 GO:0006807 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0016070 GO:0016787 GO:0016788 GO:0017076 GO:0019222 GO:0022414 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0035639 GO:0036094 GO:0040029 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

669

Amino Acids

75.19

Weight (kDa)

5.77

Isoelectric Point (pI)

46.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	231 - 279	5.8e-06	PPR repeat family
PPR_1	PF12854	334 - 365	4.2e-07	PPR repeat
PPR_2	PF13041	337 - 376	6.6e-08	PPR repeat family
PPR	PF01535	339 - 367	4.1e-07	PPR repeat
PPR_2	PF13041	379 - 417	3.2e-07	PPR repeat family
PPR	PF01535	380 - 409	2.2e-06	PPR repeat
PPR_long	PF17177	395 - 545	9.5e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	409 - 439	1.8e-06	PPR repeat
PPR_2	PF13041	411 - 458	4.2e-15	PPR repeat family
PPR	PF01535	415 - 444	2e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49240
fragaria_vesca	FvH4_2g09580
malus_domestica	MD07G1288700.v1.1
prunus_persica	Prupe.2G310200_v2.0.a1
pyrus_communis	pycom01g22880
rosa_chinensis	RchiOBHm_Chr1g0380631
rosa_laevigata	RLG00000026280
rosa_multiflora	Rmu_sc0004647.1_g000010 Rmu_sc0020141.1_g000001 Rmu_sc0020141.1_g000002 Rmu_sc0021483.1_g000003 Rmu_ssc0000015.1_g000013
rosa_roxburghii	Rroxscaffold_4G00279120
rosa_rugosa	Rorug01G0122900 Rorug01G0423100
rosa_samantha	Rh1AG447400 Rh1BG113000 Rh1BG151000 Rh1BG402900 Rh1CG417300 Rh1DG182800 Rh1DG433200 Rh7CG247500
rosa_wichuraiana	Rw1G038940 Rw7G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1568
Acc16I	TGCGCA	1 cut(s)	1170
Acc36I	ACCTGC	1 cut(s)	1987
AccBSI	CCGCTC	2 cut(s)	291, 362
AccI	GTMKAC	2 cut(s)	1346, 1856
AccII	CGCG	1 cut(s)	677
AcsI	RAATTY	4 cut(s)	841, 1129, 1444, 1595
AcuI	CTGAAG	1 cut(s)	1559
AcyI	GRCGYC	2 cut(s)	222, 573
AfaI	GTAC	1 cut(s)	530
AfiI	CCNNNNNNNGG	1 cut(s)	1113
AgsI	TTSAA	4 cut(s)	883, 1075, 1649, 1654
AjnI	CCWGG	1 cut(s)	564
AjuI	GAANNNNNNNTTGG	2 cut(s)	89, 121
Alw21I	GWGCWC	1 cut(s)	762
Alw26I	GTCTC	3 cut(s)	361, 1813, 1841
AlwNI	CAGNNNCTG	2 cut(s)	1898, 1919
AoxI	GGCC	5 cut(s)	567, 750, 794, 1439, 1863
ApeKI	GCWGC	6 cut(s)	661, 1781, 1802, 1886, 1907, 1916
ApoI	RAATTY	4 cut(s)	841, 1129, 1444, 1595
AspA2I	CCTAGG	1 cut(s)	1112
AspLEI	GCGC	3 cut(s)	252, 679, 1171
AspS9I	GGNCC	3 cut(s)	750, 794, 799
AsuC2I	CCSGG	4 cut(s)	347, 803, 1232, 1337
AsuHPI	GGTGA	8 cut(s)	103, 553, 583, 1012, 1138, 1342, 1892, 1964
AsuII	TTCGAA	1 cut(s)	995
AvaII	GGWCC	1 cut(s)	799
AvrII	CCTAGG	1 cut(s)	1112
BanII	GRGCYC	2 cut(s)	270, 762
BbsI	GAAGAC	1 cut(s)	225
Bbv12I	GWGCWC	1 cut(s)	762
BbvCI	CCTCAGC	4 cut(s)	1296, 1740, 1746, 1891
BbvI	GCAGC	6 cut(s)	673, 1789, 1793, 1873, 1894, 1903
BceAI	ACGGC	1 cut(s)	664
BcgI	CGANNNNNNTGC	2 cut(s)	406, 440
BciT130I	CCWGG	1 cut(s)	566
BciVI	GTATCC	3 cut(s)	1228, 1360, 1615
BclI	TGATCA	1 cut(s)	714
BcnI	CCSGG	4 cut(s)	347, 803, 1232, 1337
BcoDI	GTCTC	3 cut(s)	361, 1813, 1841
BfaI	CTAG	3 cut(s)	128, 1113, 1827
BfmI	CTRYAG	1 cut(s)	1857
BfoI	RGCGCY	1 cut(s)	253
BfuAI	ACCTGC	1 cut(s)	1987
BfuI	GTATCC	3 cut(s)	1228, 1360, 1615
BlnI	CCTAGG	1 cut(s)	1112
BmcAI	AGTACT	1 cut(s)	530
Bme1390I	CCNGG	5 cut(s)	347, 566, 803, 1232, 1337
Bme18I	GGWCC	1 cut(s)	799
BmgT120I	GGNCC	3 cut(s)	750, 794, 799
BmiI	GGNNCC	2 cut(s)	351, 801
BmrFI	CCNGG	5 cut(s)	347, 566, 803, 1232, 1337
BmsI	GCATC	4 cut(s)	270, 1272, 1387, 1576
BpiI	GAAGAC	1 cut(s)	225
BpmI	CTGGAG	2 cut(s)	764, 1896
Bpu10I	CCTNAGC	5 cut(s)	1296, 1740, 1746, 1752, 1891
Bpu14I	TTCGAA	1 cut(s)	995
BpuEI	CTTGAG	1 cut(s)	746
BpuMI	CCSGG	4 cut(s)	347, 803, 1232, 1337
BsaBI	GATNNNNATC	1 cut(s)	713
BsaHI	GRCGYC	2 cut(s)	222, 573
BsaJI	CCNNGG	4 cut(s)	84, 564, 753, 1112
BsaWI	WCCGGW	1 cut(s)	705
Bsc4I	CCNNNNNNNGG	1 cut(s)	1113
Bse118I	RCCGGY	1 cut(s)	569
Bse1I	ACTGG	1 cut(s)	520
Bse3DI	GCAATG	2 cut(s)	978, 1282
Bse8I	GATNNNNATC	1 cut(s)	713
BseBI	CCWGG	1 cut(s)	566
BseDI	CCNNGG	4 cut(s)	84, 564, 753, 1112
BseJI	GATNNNNATC	1 cut(s)	713
BseLI	CCNNNNNNNGG	1 cut(s)	1113
BseMI	GCAATG	2 cut(s)	978, 1282
BseMII	CTCAG	8 cut(s)	66, 1277, 1287, 1395, 1679, 1731, 1737, 1905
BseNI	ACTGG	1 cut(s)	520
BseRI	GAGGAG	9 cut(s)	530, 782, 890, 1112, 1313, 1394, 1673, 1745, 1801
BseXI	GCAGC	6 cut(s)	673, 1789, 1793, 1873, 1894, 1903
BseYI	CCCAGC	2 cut(s)	510, 892
Bsh1236I	CGCG	1 cut(s)	677
Bsh1285I	CGRYCG	1 cut(s)	235
BshFI	GGCC	5 cut(s)	569, 752, 796, 1441, 1865
BsiEI	CGRYCG	1 cut(s)	235
BsiHKAI	GWGCWC	1 cut(s)	762
BsiSI	CCGG	9 cut(s)	347, 369, 570, 628, 706, 797, 803, 1232, 1337
BslI	CCNNNNNNNGG	1 cut(s)	1113
BsmAI	GTCTC	3 cut(s)	361, 1813, 1841
BsmBI	CGTCTC	1 cut(s)	361
BsmI	GAATGC	2 cut(s)	1015, 1102
BsnI	GGCC	5 cut(s)	569, 752, 796, 1441, 1865
Bsp119I	TTCGAA	1 cut(s)	995
Bsp1286I	GDGCHC	2 cut(s)	270, 762
Bsp143I	GATC	2 cut(s)	714, 1519
Bsp19I	CCATGG	2 cut(s)	84, 753
BspANI	GGCC	5 cut(s)	569, 752, 796, 1441, 1865
BspCNI	CTCAG	8 cut(s)	65, 1278, 1288, 1396, 1680, 1732, 1738, 1904
BspFNI	CGCG	1 cut(s)	677
BspLI	GGNNCC	2 cut(s)	351, 801
BspMI	ACCTGC	1 cut(s)	1987
BspT104I	TTCGAA	1 cut(s)	995
BsrBI	CCGCTC	2 cut(s)	291, 362
BsrDI	GCAATG	2 cut(s)	978, 1282
BsrFI	RCCGGY	1 cut(s)	569
BsrI	ACTGG	1 cut(s)	520
BssAI	RCCGGY	1 cut(s)	569
BssECI	CCNNGG	4 cut(s)	84, 564, 753, 1112
BssMI	GATC	2 cut(s)	714, 1519
BssNAI	GTATAC	1 cut(s)	1347
BssNI	GRCGYC	2 cut(s)	222, 573
BssT1I	CCWWGG	3 cut(s)	84, 753, 1112
Bst1107I	GTATAC	1 cut(s)	1347
Bst2UI	CCWGG	1 cut(s)	566
Bst4CI	ACNGT	2 cut(s)	490, 1126
Bst6I	CTCTTC	1 cut(s)	34
BstACI	GRCGYC	2 cut(s)	222, 573
BstBI	TTCGAA	1 cut(s)	995
BstC8I	GCNNGC	5 cut(s)	248, 571, 740, 1555, 1941
BstDEI	CTNAG	9 cut(s)	52, 1286, 1296, 1404, 1688, 1740, 1746, 1752, 1891
BstDSI	CCRYGG	2 cut(s)	84, 753
BstFNI	CGCG	1 cut(s)	677
BstH2I	RGCGCY	1 cut(s)	253
BstHHI	GCGC	3 cut(s)	252, 679, 1171
BstKTI	GATC	2 cut(s)	717, 1522
BstMAI	GTCTC	3 cut(s)	361, 1813, 1841
BstMBI	GATC	2 cut(s)	714, 1519
BstMCI	CGRYCG	1 cut(s)	235
BstNI	CCWGG	1 cut(s)	566
BstSCI	CCNGG	5 cut(s)	345, 564, 801, 1230, 1335
BstSFI	CTRYAG	1 cut(s)	1857
BstUI	CGCG	1 cut(s)	677
BstV1I	GCAGC	6 cut(s)	673, 1789, 1793, 1873, 1894, 1903
BstV2I	GAAGAC	1 cut(s)	225
BstXI	CCANNNNNNTGG	1 cut(s)	85
BstZ17I	GTATAC	1 cut(s)	1347
BsuI	GTATCC	3 cut(s)	1228, 1360, 1615
BsuRI	GGCC	5 cut(s)	569, 752, 796, 1441, 1865
BtgI	CCRYGG	2 cut(s)	84, 753
BtsI	GCAGTG	1 cut(s)	639
BtsIMutI	CAGTG	2 cut(s)	639, 1866
BveI	ACCTGC	1 cut(s)	1987
Cac8I	GCNNGC	5 cut(s)	248, 571, 740, 1555, 1941
CaiI	CAGNNNCTG	2 cut(s)	1898, 1919
CfoI	GCGC	3 cut(s)	252, 679, 1171
Cfr10I	RCCGGY	1 cut(s)	569
Cfr13I	GGNCC	3 cut(s)	750, 794, 799
CseI	GACGC	3 cut(s)	230, 562, 683
Csp6I	GTAC	1 cut(s)	529
CviAII	CATG	2 cut(s)	85, 754
CviQI	GTAC	1 cut(s)	529
DdeI	CTNAG	9 cut(s)	52, 1286, 1296, 1404, 1688, 1740, 1746, 1752, 1891
DpnI	GATC	2 cut(s)	716, 1521
DpnII	GATC	2 cut(s)	714, 1519
Eam1104I	CTCTTC	1 cut(s)	34
EarI	CTCTTC	1 cut(s)	34
EciI	GGCGGA	4 cut(s)	149, 401, 506, 1169
Ecl136II	GAGCTC	1 cut(s)	760
Eco130I	CCWWGG	3 cut(s)	84, 753, 1112
Eco24I	GRGCYC	2 cut(s)	270, 762
Eco47I	GGWCC	1 cut(s)	799
Eco53kI	GAGCTC	1 cut(s)	760
Eco57I	CTGAAG	1 cut(s)	1559
EcoICRI	GAGCTC	1 cut(s)	760
EcoRI	GAATTC	1 cut(s)	841
EcoRII	CCWGG	1 cut(s)	564
EcoT14I	CCWWGG	3 cut(s)	84, 753, 1112
EcoT38I	GRGCYC	2 cut(s)	270, 762
ErhI	CCWWGG	3 cut(s)	84, 753, 1112
Esp3I	CGTCTC	1 cut(s)	361
FaeI	CATG	2 cut(s)	88, 757
FatI	CATG	2 cut(s)	84, 753
FauI	CCCGC	2 cut(s)	455, 1116
FbaI	TGATCA	1 cut(s)	714
FblI	GTMKAC	2 cut(s)	1346, 1856
FriOI	GRGCYC	2 cut(s)	270, 762
FspBI	CTAG	3 cut(s)	128, 1113, 1827
FspI	TGCGCA	1 cut(s)	1170
GlaI	GCGC	3 cut(s)	251, 678, 1170
GsaI	CCCAGC	2 cut(s)	514, 896
GsuI	CTGGAG	2 cut(s)	764, 1896
HaeII	RGCGCY	1 cut(s)	253
HaeIII	GGCC	5 cut(s)	569, 752, 796, 1441, 1865
HapII	CCGG	9 cut(s)	347, 369, 570, 628, 706, 797, 803, 1232, 1337
HgaI	GACGC	3 cut(s)	230, 562, 683
HhaI	GCGC	3 cut(s)	252, 679, 1171
Hin1I	GRCGYC	2 cut(s)	222, 573
Hin1II	CATG	2 cut(s)	88, 757
Hin6I	GCGC	3 cut(s)	250, 677, 1169
HinP1I	GCGC	3 cut(s)	250, 677, 1169
HincII	GTYRAC	1 cut(s)	493
HindII	GTYRAC	1 cut(s)	493
HinfI	GANTC	4 cut(s)	709, 848, 1258, 1970
HpaII	CCGG	9 cut(s)	347, 369, 570, 628, 706, 797, 803, 1232, 1337
HphI	GGTGA	8 cut(s)	103, 553, 583, 1012, 1138, 1342, 1892, 1964
Hpy166II	GTNNAC	6 cut(s)	493, 730, 1122, 1333, 1347, 1857
Hpy188I	TCNGA	9 cut(s)	55, 535, 696, 714, 822, 847, 853, 1393, 1963
Hpy188III	TCNNGA	2 cut(s)	610, 620
Hpy8I	GTNNAC	6 cut(s)	493, 730, 1122, 1333, 1347, 1857
Hpy99I	CGWCG	3 cut(s)	578, 677, 700
HpyCH4III	ACNGT	2 cut(s)	490, 1126
HpyCH4IV	ACGT	1 cut(s)	1238
HpyCH4V	TGCA	4 cut(s)	69, 1589, 1666, 1988
HpyF3I	CTNAG	9 cut(s)	52, 1286, 1296, 1404, 1688, 1740, 1746, 1752, 1891
HpySE526I	ACGT	1 cut(s)	1238
Hsp92I	GRCGYC	2 cut(s)	222, 573
Hsp92II	CATG	2 cut(s)	88, 757
HspAI	GCGC	3 cut(s)	250, 677, 1169
KroI	GCCGGC	1 cut(s)	569
KroNI	GCCGGC	1 cut(s)	571
Ksp22I	TGATCA	1 cut(s)	714
Kzo9I	GATC	2 cut(s)	714, 1519
LmnI	GCTCC	9 cut(s)	296, 348, 519, 649, 757, 1099, 1137, 1684, 1915
Lsp1109I	GCAGC	6 cut(s)	673, 1789, 1793, 1873, 1894, 1903
LweI	GCATC	4 cut(s)	270, 1272, 1387, 1576
MaeI	CTAG	3 cut(s)	128, 1113, 1827
MaeII	ACGT	1 cut(s)	1238
MaeIII	GTNAC	3 cut(s)	589, 1226, 1815
MalI	GATC	2 cut(s)	716, 1521
MbiI	CCGCTC	2 cut(s)	291, 362
MboI	GATC	2 cut(s)	714, 1519
MhlI	GDGCHC	2 cut(s)	270, 762
MluCI	AATT	8 cut(s)	9, 841, 1129, 1252, 1444, 1595, 1649, 1712
MmeI	TCCRAC	5 cut(s)	489, 558, 719, 1014, 1611
MroNI	GCCGGC	1 cut(s)	569
MseI	TTAA	6 cut(s)	684, 1143, 1182, 1248, 1482, 1611
MslI	CAYNNNNRTG	1 cut(s)	644
MspA1I	CMGCKG	1 cut(s)	1916
MspI	CCGG	9 cut(s)	347, 369, 570, 628, 706, 797, 803, 1232, 1337
MspR9I	CCNGG	5 cut(s)	347, 566, 803, 1232, 1337
Mva1269I	GAATGC	2 cut(s)	1015, 1102
MvaI	CCWGG	1 cut(s)	566
MvnI	CGCG	1 cut(s)	677
NaeI	GCCGGC	1 cut(s)	571
NciI	CCSGG	4 cut(s)	347, 803, 1232, 1337
NcoI	CCATGG	2 cut(s)	84, 753
NdeII	GATC	2 cut(s)	714, 1519
NgoMIV	GCCGGC	1 cut(s)	569
NlaIII	CATG	2 cut(s)	88, 757
NlaIV	GGNNCC	2 cut(s)	351, 801
NmeAIII	GCCGAG	1 cut(s)	1910
NmuCI	GTSAC	2 cut(s)	589, 1226
NsbI	TGCGCA	1 cut(s)	1170
NspV	TTCGAA	1 cut(s)	995
PcsI	WCGNNNNNNNCGW	2 cut(s)	213, 228
PctI	GAATGC	2 cut(s)	1015, 1102
PdiI	GCCGGC	1 cut(s)	571
PfeI	GAWTC	4 cut(s)	709, 848, 1258, 1970
PflFI	GACNNNGTC	1 cut(s)	1852
PfoI	TCCNGGA	1 cut(s)	345
PsiI	TTATAA	1 cut(s)	1568
Psp124BI	GAGCTC	1 cut(s)	762
Psp6I	CCWGG	1 cut(s)	564
PspFI	CCCAGC	2 cut(s)	510, 892
PspGI	CCWGG	1 cut(s)	564
PspN4I	GGNNCC	2 cut(s)	351, 801
PspPI	GGNCC	3 cut(s)	750, 794, 799
PstNI	CAGNNNCTG	2 cut(s)	1898, 1919
PsyI	GACNNNGTC	1 cut(s)	1852
PvuII	CAGCTG	1 cut(s)	1916
RsaI	GTAC	1 cut(s)	530
RsaNI	GTAC	1 cut(s)	529
RseI	CAYNNNNRTG	1 cut(s)	644
SacI	GAGCTC	1 cut(s)	762
SaqAI	TTAA	6 cut(s)	684, 1143, 1182, 1248, 1482, 1611
Sau3AI	GATC	2 cut(s)	714, 1519
Sau96I	GGNCC	3 cut(s)	750, 794, 799
ScaI	AGTACT	1 cut(s)	530
ScrFI	CCNGG	5 cut(s)	347, 566, 803, 1232, 1337
SduI	GDGCHC	2 cut(s)	270, 762
SfaNI	GCATC	4 cut(s)	270, 1272, 1387, 1576
SfcI	CTRYAG	1 cut(s)	1857
SfuI	TTCGAA	1 cut(s)	995
SinI	GGWCC	1 cut(s)	799
SmiMI	CAYNNNNRTG	1 cut(s)	644
SmlI	CTYRAG	1 cut(s)	761
SmoI	CTYRAG	1 cut(s)	761
Sse9I	AATT	8 cut(s)	9, 841, 1129, 1252, 1444, 1595, 1649, 1712
SspMI	CTAG	3 cut(s)	128, 1113, 1827
SstI	GAGCTC	1 cut(s)	762
StyD4I	CCNGG	5 cut(s)	345, 564, 801, 1230, 1335
StyI	CCWWGG	3 cut(s)	84, 753, 1112
TaaI	ACNGT	2 cut(s)	490, 1126
TaiI	ACGT	1 cut(s)	1241
TaqI	TCGA	4 cut(s)	264, 426, 621, 995
TasI	AATT	8 cut(s)	9, 841, 1129, 1252, 1444, 1595, 1649, 1712
TatI	WGTACW	1 cut(s)	528
TfiI	GAWTC	4 cut(s)	709, 848, 1258, 1970
Tru1I	TTAA	6 cut(s)	684, 1143, 1182, 1248, 1482, 1611
Tru9I	TTAA	6 cut(s)	684, 1143, 1182, 1248, 1482, 1611
TscAI	CASTG	2 cut(s)	646, 1873
TseFI	GTSAC	2 cut(s)	589, 1226
TseI	GCWGC	6 cut(s)	661, 1781, 1802, 1886, 1907, 1916
Tsp45I	GTSAC	2 cut(s)	589, 1226
TspGWI	ACGGA	1 cut(s)	487
TspRI	CASTG	2 cut(s)	646, 1873
Tth111I	GACNNNGTC	1 cut(s)	1852
VpaK11BI	GGWCC	1 cut(s)	799
XapI	RAATTY	4 cut(s)	841, 1129, 1444, 1595
XmaJI	CCTAGG	1 cut(s)	1112
XmiI	GTMKAC	2 cut(s)	1346, 1856
XspI	CTAG	3 cut(s)	128, 1113, 1827
ZrmI	AGTACT	1 cut(s)	530

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.